ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII3385 good A KOG2245 RNA processing and modification Poly(A) polymerase and related nucleotidyltransferases
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII3385 1163938 1162145 -598
(598 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKR002w [A] KOG2245 Poly(A) polymerase and related nucleotidyltr... 785 0.0
SPBC646.04 [A] KOG2245 Poly(A) polymerase and related nucleotidy... 541 e-154
7302443 [A] KOG2245 Poly(A) polymerase and related nucleotidyltr... 389 e-108
Hs16306568 [A] KOG2245 Poly(A) polymerase and related nucleotidy... 376 e-104
Hs9910478 [A] KOG2245 Poly(A) polymerase and related nucleotidyl... 374 e-103
ECU02g0730 [A] KOG2245 Poly(A) polymerase and related nucleotidy... 371 e-102
At1g17980 [A] KOG2245 Poly(A) polymerase and related nucleotidyl... 351 2e-96
At2g25850 [A] KOG2245 Poly(A) polymerase and related nucleotidyl... 342 1e-93
CE20204 [A] KOG2245 Poly(A) polymerase and related nucleotidyltr... 338 1e-92
At4g32850 [A] KOG2245 Poly(A) polymerase and related nucleotidyl... 337 2e-92
CE01669 [A] KOG2245 Poly(A) polymerase and related nucleotidyltr... 326 7e-89
CE23726 [A] KOG2245 Poly(A) polymerase and related nucleotidyltr... 325 2e-88
Hs14249160 [A] KOG2245 Poly(A) polymerase and related nucleotidy... 275 1e-73
At3g06560 [A] KOG2245 Poly(A) polymerase and related nucleotidyl... 184 4e-46
>YKR002w [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 568
Score = 785 bits (2028), Expect = 0.0
Identities = 385/551 (69%), Positives = 450/551 (80%), Gaps = 2/551 (0%)
Query: 1 MSQKKIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQ 60
MS +K+FG+TGP+ST G TAAEN LNDSLIQ+LKKEGSFETE+ET RV VL+I Q+L Q
Sbjct: 1 MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ 60
Query: 61 EFVYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVF 120
FVY+VSKKKNMSDGMARDAGGK+FT+GSYRLGVHGPGSDIDTL+VVPKHV+REDFFTVF
Sbjct: 61 RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF 120
Query: 121 DALLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNV 180
D+LLRER EL+EIA VPDAFVPIIKIKF+GISIDLI A+LD PQVP+SLTLSDKNLLRN+
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 181 DEKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFV 240
DEKDLRALNGTRVTDEILELVP F+IALRAIK+WA+RRAVYAN+FGFPGGVAWAM V
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 241 VRICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKM 300
RICQLYPNACSAVI+++FF ILS W WPQPV+LKPIEDGPLQVRVWNPKIYAQDRSH+M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 301 PVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXX 360
PVITPAYPSMCATHNI+ESTKKVIL E RGV++T IFSN+ SW
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF 360
Query: 361 XXTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPFIEPYESSYIYNNEDE 420
+ T+GSDEQHLKWSG VESK+RLLV KLEVL GI +AHPF +P+ESSY ED+
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD 420
Query: 421 YKEIMNNYGTHKTEGVLKKFTKITDANKDDEASKNSNQVHIATMFIGLDINTEESK-KID 479
Y+ I + YG+HKTE L +TD NK++E+ K++ + +++TM+IGLD N E K K+D
Sbjct: 421 YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD 480
Query: 480 IHIPCQEFFNLCRSL-PDYEDPETYSLIIKYVKVHDLPDEVYQEGETRPVKSSKKRKPEK 538
IHIPC EF NLCRS DY D + ++L +++VK +DLPDEV+ E E RP K SK++ +
Sbjct: 481 IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLDA 540
Query: 539 SGEKSKRPKSD 549
E KR KSD
Sbjct: 541 RHETVKRSKSD 551
>SPBC646.04 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 566
Score = 541 bits (1395), Expect = e-154
Identities = 280/559 (50%), Positives = 382/559 (68%), Gaps = 19/559 (3%)
Query: 5 KIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVY 64
K +G+T PIST T ENALN +LI +LK + FE+ E+ KRV VL+ Q++T EFV
Sbjct: 4 KQWGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVK 63
Query: 65 QVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDALL 124
+VS K+M++ MA +AGGK+FT+GSYRLGV+GPGSDIDTL+VVPKHVSR++FF + +L
Sbjct: 64 KVSLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRDNFFQDLEPML 123
Query: 125 RERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKD 184
RER E+ ++A+VPDA+VPIIK KF GISIDLIFA+L +P+VP L LSD NLL+ V+E+
Sbjct: 124 REREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERC 183
Query: 185 LRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRIC 244
+ +LNGTRVTD+IL+LVPN+ FK ALRAIK WA+RRA+YANV GFPGGVAWAM V RIC
Sbjct: 184 VLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARIC 243
Query: 245 QLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVIT 304
QLYPNA S+VI++KFF+IL +W WPQP+LLKPIEDGPLQVR+WNPK+Y D++H+MP+IT
Sbjct: 244 QLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIIT 303
Query: 305 PAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXXXXTV 364
PAYPSMCATHNI+ ST+ +IL E+ R E+ +I L W T+
Sbjct: 304 PAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTI 363
Query: 365 MVSTKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPFIEPYESSYIYNNEDEYKEI 424
+ K ++ Q LKW+G VESKLR LV +LE++ I LAHPF + ++ Y ++E+E +++
Sbjct: 364 TAAAKTAEAQ-LKWAGLVESKLRHLVTRLELVDAIALAHPFNKGFDKVYNCSSEEEAQQV 422
Query: 425 MNNYG-------------THKTEGVLKKFTKITDANKDDEASKNSNQVHIATMFIGLDIN 471
+ + T K + A+ + K V+ T +IGL++
Sbjct: 423 ASGVTLEVAYESTDHEKLANDTVNEEKADNTESKADGSENGEKQIFPVYTTTCYIGLELE 482
Query: 472 TEES---KKIDIHIPCQEFFNLCRSLPDYEDPETYSLIIKYVKVHDLPDEVYQEGETRPV 528
++ K++DI P QEF+ LC+ Y+D ++ IK K LPDEV++ GE RP
Sbjct: 483 KKKGHPIKRLDISWPTQEFYELCKKWDKYDD-TLMNVFIKNTKNTALPDEVFEPGEERP- 540
Query: 529 KSSKKRKPEKSGEKSKRPK 547
K++KKR + +++ K
Sbjct: 541 KATKKRSTADTAHSTEQLK 559
>7302443 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 830
Score = 389 bits (999), Expect = e-108
Identities = 204/489 (41%), Positives = 289/489 (58%), Gaps = 28/489 (5%)
Query: 5 KIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVY 64
K G+T IS P + D L L+ FE+++E R+ +L L +++V
Sbjct: 26 KQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVK 85
Query: 65 QVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDALL 124
++S KNM + A GGK++TFGSYRLGVH G+DID L V P+++ R D+F F +L
Sbjct: 86 EISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERTDYFQSFFEVL 145
Query: 125 RERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKD 184
+++PE+ E SV +AFVP+IK+ F+GI IDL+FA+L L ++P L D NLLRN+D +
Sbjct: 146 KKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRS 205
Query: 185 LRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRIC 244
+R+LNG RVTDEIL LVPN +F++ALR IK+WAK+ +Y+N G+ GGV WAM V R C
Sbjct: 206 VRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTC 265
Query: 245 QLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVIT 304
QLYPNA +A ++ KFF + SRWKWP PVLLK ++ L+ +VW+P++ A DR H MP+IT
Sbjct: 266 QLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIIT 325
Query: 305 PAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXXXXTV 364
PAYP +T N+SESTKKVIL+E RG+ +T +I + WE +
Sbjct: 326 PAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVL 385
Query: 365 MVSTKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPFIEPYESSYIYNNEDEYKEI 424
+V+++ +D+ HL+W G VESK+RLL+ LE P I LAH + P + +
Sbjct: 386 LVNSQTADD-HLEWCGLVESKVRLLIGNLERNPHIALAH--VNP--KCFEFKKGQSANNS 440
Query: 425 MNNYGTHKTEGVLKKFTKITDANKDDEASKNSNQVHIAT------MFIGLDINTEESKKI 478
NN G N+DD NQ + + FIGL+ E+ +
Sbjct: 441 QNNSG-----------------NEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLNV 483
Query: 479 DIHIPCQEF 487
D+ Q F
Sbjct: 484 DLTESIQNF 492
>Hs16306568 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 736
Score = 376 bits (966), Expect = e-104
Identities = 195/495 (39%), Positives = 296/495 (59%), Gaps = 22/495 (4%)
Query: 3 QKKIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEF 62
Q+K +G+T PIS P ++ LI +K G FE EEE R+ VL L +E+
Sbjct: 15 QQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEW 74
Query: 63 VYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDA 122
+ VS+ KN+ + GGK+FTFGSYRLGVH G+DID L V P+HV R DFF F
Sbjct: 75 ISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFE 134
Query: 123 LLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDE 182
L+ + + + +V DAFVP+IK +F+GI IDL+FA+L + + +L L D + LR++D
Sbjct: 135 KLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDI 194
Query: 183 KDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVR 242
+ +R+LNG RVTDEIL LVPNK +F++ LRA+K+WAKRR +Y+N+ GF GGV+WAM V R
Sbjct: 195 RCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVAR 254
Query: 243 ICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPV 302
CQLYPNA ++ ++ KFF + S+W+WP PVLLK E+ L + VW+P++ DR H MP+
Sbjct: 255 TCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPI 314
Query: 303 ITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXXXX 362
ITPAYP +T+N+S ST+ V++ E ++G+ VT +I + W
Sbjct: 315 ITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDW-SKLLEPPNFFQKYRHY 373
Query: 363 TVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPFIEPYESSYIYNNEDEYK 422
V+ ++ ++E HL+W G VESK+R+LV LE I LAH + P N++ +K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAH--VNPQS---FPGNKEHHK 428
Query: 423 EIMNNYGTHKTEGVLKKFTKITDANK------------DDEASKNSNQVHIATMFIGLDI 470
+ NNY + G++ F ++ +A D + +N +++ + ++
Sbjct: 429 D--NNYVSMWFLGII--FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 484
Query: 471 NTEESKKIDIHIPCQ 485
+ K++ ++P +
Sbjct: 485 THVKKKQLHHYLPAE 499
>Hs9910478 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 636
Score = 374 bits (960), Expect = e-103
Identities = 181/397 (45%), Positives = 264/397 (65%), Gaps = 1/397 (0%)
Query: 7 FGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVYQV 66
+GV+ PIS P + L LI+ L+ G FE EEE +R+ VLE L +E++ ++
Sbjct: 20 YGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREI 79
Query: 67 SKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDALLRE 126
S+ K++ + + GGK+FTFGSYRLGVH G+DID L V P HV R DFFT F A L+
Sbjct: 80 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 139
Query: 127 RPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKDLR 186
+ E++++ +V +AFVP+IK+ F+GI ID++FA+L L +P L L D +LL+N+D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 187 ALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRICQL 246
+LNG RVTDEIL LVPN +F++ LRAIK+WAK +Y+N+ GF GGV+WAM V R CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 247 YPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVITPA 306
YPNA ++ ++ KFF + S W+WP PVLLK E+ L + VW+P++ DR H MP+ITPA
Sbjct: 260 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 307 YPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXXXXTVMV 366
YP +T+N+S ST+ V++ E ++G+ +T +I ++ W V++
Sbjct: 320 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEW-SKLFEAPSFFQKYKHYIVLL 378
Query: 367 STKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAH 403
++ +++QHL+W G VESK+R+LV LE I LAH
Sbjct: 379 ASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAH 415
>ECU02g0730 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 505
Score = 371 bits (953), Expect = e-102
Identities = 188/406 (46%), Positives = 260/406 (63%), Gaps = 5/406 (1%)
Query: 1 MSQKKI-FGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLT 59
MS+K +GVTGP+ST T E L+ + + L++ G FE ++E R VL +
Sbjct: 3 MSEKSYKYGVTGPLSTRESTEEEIRLSGEMDKYLQERGFFEDDKEGQTRERVLGKLNFMV 62
Query: 60 QEFVYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTV 119
+EFV ++++ K DG R GGK+FTFGSYRLGVH G+DID L +VP+HVSR DFFT
Sbjct: 63 REFVARMARNKGSGDG-ERPCGGKIFTFGSYRLGVHSKGADIDALCIVPRHVSRSDFFTH 121
Query: 120 FDALLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRN 179
F L+ P +EE+ + DAFVPIIK+KF GI IDL+FA+L +P V + L + LL++
Sbjct: 122 FYEELKGDPNIEEVTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKS 181
Query: 180 VDEKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMF 239
+DEK + +LNG+RVTDE+L LVP+ +F ALR IK WAKRR VY N +G+ GGVA+++
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 240 VVRICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHK 299
V R+CQLYPNA S I+ KFF++ S WKWP PV+L+P+ D ++VW+PK+Y D+ H+
Sbjct: 242 VARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 300 MPVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXX 359
MPVITPAYPSMCATHN+S ST+ VI E R ++ N+
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVITMEFTRAHKILSDPERNDF---RRIFELSDFFSRY 358
Query: 360 XXXTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPF 405
+++ +E KW G++ESK+R+L K E + + A PF
Sbjct: 359 RLFVEVLAMSSCEEDFPKWEGYLESKIRILASKFEAVDDVLYAIPF 404
>At1g17980 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 714
Score = 351 bits (901), Expect = 2e-96
Identities = 173/390 (44%), Positives = 255/390 (65%), Gaps = 3/390 (0%)
Query: 7 FGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVYQV 66
FGV+ PIS GPT + L + L+ G +E++EE +R VL I ++ + ++ +
Sbjct: 11 FGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTI 70
Query: 67 SKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRE-DFFTVFDALLR 125
S+ K ++D + +A K+FTFGSYRLGVHGPG+DIDTL V P+H +RE DFF +L
Sbjct: 71 SRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLS 130
Query: 126 ERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKDL 185
E PE+ E+ VPDA VP++ K NG+SIDL++A+L L +P L LS ++L+N DE+ +
Sbjct: 131 EMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTV 190
Query: 186 RALNGTRVTDEILELVPN-KTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRIC 244
R+LNG RVTD+IL LVPN + +F+ LR ++ WAKRR VY+NV GF GG+ WA+ V RIC
Sbjct: 191 RSLNGCRVTDQILRLVPNIQQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARIC 250
Query: 245 QLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVIT 304
QLYPNA +++S+FF++ +W WP + L ++G L ++VW+P+I +DR H MP+IT
Sbjct: 251 QLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIIT 310
Query: 305 PAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXXXXTV 364
PAYP M +++N+SEST +++ E QRG E+ + + SN+ W+ +
Sbjct: 311 PAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQI 370
Query: 365 MVSTKGSDEQHLKWSGFVESKLRLLVQKLE 394
+S D+ KW G+VES+LR L K+E
Sbjct: 371 DISAANVDDLR-KWKGWVESRLRQLTLKIE 399
>At2g25850 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 414
Score = 342 bits (876), Expect = 1e-93
Identities = 171/392 (43%), Positives = 253/392 (63%), Gaps = 1/392 (0%)
Query: 5 KIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVY 64
K +G+T P+S GP+AA+ N L + L EG +E++EET +R V+ ++ + +V
Sbjct: 21 KSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVK 80
Query: 65 QVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDALL 124
Q+++++ +D M DA +FTFGSYRLGVHGP +DIDTL V P +V+REDFF F +L
Sbjct: 81 QLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREDFFIFFRDIL 140
Query: 125 RERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKD 184
E E+ E+ V DA VP++K KF GISIDL++A + L +P L +S+ ++L +VDE+
Sbjct: 141 AEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQT 200
Query: 185 LRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRIC 244
+R+LNG RV D+IL+LVPN F+ LR +K WAK+R VY+NV GF GGV WA+ V R+C
Sbjct: 201 VRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLC 260
Query: 245 QLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVIT 304
Q YPNA ++++S+FF++ ++W+WP PV+L IE+ L VW+P+ +DR H MP+IT
Sbjct: 261 QFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIIT 320
Query: 305 PAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXXXXTV 364
PAYP M +++N+S+ST +V+ + Q G + Q+I N+ W V
Sbjct: 321 PAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQV 380
Query: 365 MVSTKGSDEQHLKWSGFVESKLRLLVQKLEVL 396
V + E L W G+VES+ R L K++ L
Sbjct: 381 DVLAADA-EDLLAWKGWVESRFRQLTLKVDSL 411
>CE20204 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 655
Score = 338 bits (868), Expect = 1e-92
Identities = 171/403 (42%), Positives = 255/403 (62%), Gaps = 7/403 (1%)
Query: 6 IFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVYQ 65
+ GV+ PIS P + + A LI+ LKK GS+E +EET +R+ VL +L +E+V
Sbjct: 11 LLGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKN 70
Query: 66 VSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDALLR 125
V+ K + +G +AGGK+FTFGSYRLGVH G+DIDTL VVP+H+ R DFFT F +L
Sbjct: 71 VTAMK-IPNGEGVNAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRSDFFTSFKEMLN 129
Query: 126 ERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKDL 185
P + E+ V +AFVP++K+K++G+ +D++FA+L L +VP + LSD NLLRN+D++ +
Sbjct: 130 NDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESV 189
Query: 186 RALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRICQ 245
R+LNG RV +++L+LVP + F + LRAIK+WAK +Y+N GF GG+ WA+ V R CQ
Sbjct: 190 RSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQ 249
Query: 246 LYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDG-----PLQVRVWNPKIYAQDRSHKM 300
LYPNA + ++ + F I S W WP PV+L + + L VW+P+ DR H M
Sbjct: 250 LYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVM 309
Query: 301 PVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXXX 360
P+ITPA+P +THN++ ST VI +E+ +E+ + I + W
Sbjct: 310 PIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKH 369
Query: 361 XXTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAH 403
++++ ++E+ L + GF+ES++RLLVQ LE I +AH
Sbjct: 370 FIALIMAAP-NEEEELNYGGFLESRIRLLVQSLERNQDIIIAH 411
>At4g32850 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 729
Score = 337 bits (865), Expect = 2e-92
Identities = 172/406 (42%), Positives = 256/406 (62%), Gaps = 3/406 (0%)
Query: 1 MSQKKIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQ 60
++ K +G+T P+S GP++A+ N L + L EG +E++++T +R VL ++ +
Sbjct: 14 LNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVK 73
Query: 61 EFVYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRE-DFFTV 119
+V Q+++++ +D M DA +FTFGSYRLGVHGPG+DIDTL V P +V+RE DFF +
Sbjct: 74 HWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFII 133
Query: 120 FDALLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRN 179
+L E E+ E+ VPDA VP++K KF GI IDL++A + L VP L +S ++L
Sbjct: 134 LHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCE 193
Query: 180 VDEKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMF 239
VDE +R+LNG RV D+IL+LVPN F+ LR +K WAK+R VY+NV GF GGV WA+
Sbjct: 194 VDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALL 253
Query: 240 VVRICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHK 299
V R+CQLYPNA ++++S+FF++ ++W+WP PV+L IE+ L VW+ + +DR H
Sbjct: 254 VARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHL 313
Query: 300 MPVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXX 359
MP+ITPAYP M +++N+S+ST +V+ + Q G + Q+I N+ W
Sbjct: 314 MPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYK 373
Query: 360 XXXTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLE-VLPGINLAHP 404
V + E L W G+VES+ R L K+E G+ + HP
Sbjct: 374 NYLQVDI-VAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHP 418
>CE01669 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 554
Score = 326 bits (835), Expect = 7e-89
Identities = 170/398 (42%), Positives = 249/398 (61%), Gaps = 7/398 (1%)
Query: 2 SQKKIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQE 61
S IFGV+ PIST P A + AL SL L++ SFE+++ET R+ VL+ L ++
Sbjct: 9 SSTPIFGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKD 68
Query: 62 FVYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFD 121
+V + + + D M +AGGK+ FGSYRLGVH G+DID+++V P+H++R DFF F
Sbjct: 69 WVQKTTISRIPKDQMF-NAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRSDFFNSFK 127
Query: 122 ALLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVD 181
+L + PE+ E+ +V AFVPI+ +K++G+ ID++FA+L L VP L + D +LL+N+D
Sbjct: 128 DILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLD 187
Query: 182 EKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVV 241
E+ +R+LNG RV +++L+LVP++ +F I LRAIK+WAK +Y+N GF GG+ WA+ V
Sbjct: 188 EESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVA 247
Query: 242 RICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPI-----EDGPLQVRVWNPKIYAQDR 296
RICQLYPNA + +I K F I S W WP PVLL I + L VW+P+ DR
Sbjct: 248 RICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADR 307
Query: 297 SHKMPVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXX 356
H MP+ITPA+P +THN+S S+ KVI E+++ + + KI L W
Sbjct: 308 YHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFS 367
Query: 357 XXXXXXTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLE 394
+ + + S ++ L + GF ES++R LVQ LE
Sbjct: 368 KYHHFIALKLKAE-SVKEELAFGGFFESRIRQLVQILE 404
>CE23726 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 554
Score = 325 bits (832), Expect = 2e-88
Identities = 198/564 (35%), Positives = 297/564 (52%), Gaps = 66/564 (11%)
Query: 5 KIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVY 64
+ FGV+ PIST P A + L SL + L + S+E +EET +RV VL+ ++++
Sbjct: 17 RTFGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQ 76
Query: 65 QVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDALL 124
++++ + D + +AGG++ FGSYRLGVH G+DIDTL++ P+H +R DFF+ F +L
Sbjct: 77 KITEARYPKDQLF-NAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRADFFSSFKQML 135
Query: 125 RERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKD 184
+ PE+ + +V +AFVPI+ +K++GI ID +FA+L L +VP L + D LL+N+D++
Sbjct: 136 AKDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQES 195
Query: 185 LRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRIC 244
+R+LNG RV + +L+LVPN+ +F I LRAIK+WAK +Y+N GF GG+ WA+ V R C
Sbjct: 196 VRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARAC 255
Query: 245 QLYPNACSAVIISKFFQILSRWKWPQPVLLKPIED-----GPLQVRVWNPKIYAQDRSHK 299
QLYPNA + +I K F I S WKWP PVLL I L VW+P+ DR H
Sbjct: 256 QLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHL 315
Query: 300 MPVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEXXXXXXXXXXXXX 359
MP++TPA+P +THN+S S+ KVI E++ + I + +W
Sbjct: 316 MPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYK 375
Query: 360 XXXTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPFIEPYESSYIYNNED 419
++ + T +++ L + GF ES++R LV LE GI LAH I P
Sbjct: 376 HFISLSM-TAETEKDELAFGGFFESRIRQLVLILEKNQGIKLAH--INP----------- 421
Query: 420 EYKEIMNNYGTHKTEGVLKKFTKITDANKDDEASKNSNQVHIATMFIGLDINTEESKKID 479
KKF D K + FIGL + E K +D
Sbjct: 422 ------------------KKFKAAKDPKK-------------SVWFIGLQFD-ENVKNLD 449
Query: 480 IHIPCQEFFN----LCRSLPDYEDPETYSLIIKYVKVHDLPD----------EVYQEGET 525
+ Q+F +S+ D E YVK DL ++Y++ E+
Sbjct: 450 LTKDIQQFKRNIDYQAKSVKDIEANCAVETDFSYVKRSDLAQTISVKDLKQGKMYKKPES 509
Query: 526 RPVKSSKKRKPEKSGEKSKRPKSD 549
+ S K++ E + K+ K D
Sbjct: 510 KDPVSKKRKVSENAPSVPKKQKLD 533
>Hs14249160 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 285
Score = 275 bits (704), Expect = 1e-73
Identities = 129/263 (49%), Positives = 184/263 (69%)
Query: 4 KKIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFV 63
+K +G+T PIS P + L LI+ LK G FE EEE +R+ +L L +E++
Sbjct: 17 QKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWI 76
Query: 64 YQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSREDFFTVFDAL 123
++S+ KN+ + + GGK+FTFGSYRLGVH G+DID L V P+HV R DFFT F
Sbjct: 77 REISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDK 136
Query: 124 LRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEK 183
L+ + E++++ +V +AFVP+IK+ F+GI ID++FA+L L +P L L D +LL+N+D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 184 DLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRI 243
+R+LNG RVTDEIL LVPN +F++ LRAIK+WAKR +Y+N+ GF GGV+WAM V R
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 244 CQLYPNACSAVIISKFFQILSRW 266
CQLYPNA ++ ++ KFF + S+W
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKW 279
>At3g06560 [A] KOG2245 Poly(A) polymerase and related nucleotidyltransferases
Length = 482
Score = 184 bits (466), Expect = 4e-46
Identities = 118/376 (31%), Positives = 186/376 (49%), Gaps = 14/376 (3%)
Query: 36 EGSFETEEETGKRVAVLEIFQKLTQEFVYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVH 95
EG + E+ KR V+ +K+ +V V+ + + + +GSY LGV+
Sbjct: 4 EGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVY 63
Query: 96 GPGSDIDTLIVVPKHVSREDFFTVFDALLRERPELEEIASVPDAFVPIIKIKFNGISIDL 155
G SDID L + P S DFF +L+ R E+ E+ V DA VP+I+ KF+GI +DL
Sbjct: 64 GSESDIDALCIGPFFASIADFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDL 123
Query: 156 IFAKLDLPQVPISLTLSDKNLLRNVDEKDLRALNGTRVTDEILELVPNKTSFKIALRAIK 215
+A+L + +P ++ + + LR++DE + L+G R IL+LVP+ F+ LR +K
Sbjct: 124 PYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLRCVK 183
Query: 216 IWAKRRAVYANVFGFPGGVAWAMFVVRICQLYPNACSAVIISKFFQILSRWKWPQPVLLK 275
+WAKRR VY N+ GF GGV A+ +C PNA + +++ FF + W+WP PV+L
Sbjct: 184 LWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPVVL- 242
Query: 276 PIEDGPLQVRVWNPKIYAQDRSHKMPVITPAYPSMCATHNISESTKKVILSELQRGVEVT 335
+ED P A MP+ P I+ ST I++E G +T
Sbjct: 243 -LED-------TYPSTGAP--PGLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLT 292
Query: 336 QKIFSNELSWEXXXXXXXXXXXXXXXXTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLEV 395
+ SW+ + +S + E W G+V+S+ R L+ K+E
Sbjct: 293 KDYLKLNFSWKDLFELYPYANTYTWFTKIHLSA-ANQEDLSDWVGWVKSRFRCLLIKIEE 351
Query: 396 LPGINLAHP--FIEPY 409
+ GI +P ++E Y
Sbjct: 352 VYGICDPNPTEYVETY 367
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,307,133
Number of Sequences: 60738
Number of extensions: 1533621
Number of successful extensions: 4556
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4514
Number of HSP's gapped (non-prelim): 15
length of query: 598
length of database: 30,389,216
effective HSP length: 112
effective length of query: 486
effective length of database: 23,586,560
effective search space: 11463068160
effective search space used: 11463068160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)