ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII3412 good J KOG3421 Translation, ribosomal structure and biogenesis 60S ribosomal protein L14
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII3412 1175227 1174805 -141
(141 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHL001w [J] KOG3421 60S ribosomal protein L14 140 4e-34
YKL006w [J] KOG3421 60S ribosomal protein L14 138 2e-33
SPAC1805.13 [J] KOG3421 60S ribosomal protein L14 87 5e-18
Hs20555164 [J] KOG3421 60S ribosomal protein L14 73 1e-13
Hs16753225 [J] KOG3421 60S ribosomal protein L14 72 3e-13
7295067 [J] KOG3421 60S ribosomal protein L14 60 7e-10
CE19677 [J] KOG3421 60S ribosomal protein L14 59 2e-09
At2g20450 [J] KOG3421 60S ribosomal protein L14 56 2e-08
At4g27090 [J] KOG3421 60S ribosomal protein L14 52 3e-07
>YHL001w [J] KOG3421 60S ribosomal protein L14
Length = 138
Score = 140 bits (354), Expect = 4e-34
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 46 QALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKK 105
+ LIDGP GVPRQAINLGQVVLTPLTFA+PRGA++ATVSKKWAAAGV EKWA SSWAKK
Sbjct: 43 KVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVSKKWAAAGVCEKWAASSWAKK 102
Query: 106 IAQRERRAALSDFERFQVL 124
IAQRERRAAL+DFERFQV+
Sbjct: 103 IAQRERRAALTDFERFQVM 121
>YKL006w [J] KOG3421 60S ribosomal protein L14
Length = 138
Score = 138 bits (348), Expect = 2e-33
Identities = 67/79 (84%), Positives = 73/79 (91%)
Query: 46 QALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKK 105
+ LIDGP GVPRQAINLGQVVLTPLTFA+PRGA++ATVSKKWAAA V EKWA SSWAKK
Sbjct: 43 KVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVSKKWAAAAVCEKWAASSWAKK 102
Query: 106 IAQRERRAALSDFERFQVL 124
IAQRERRAAL+DFERFQV+
Sbjct: 103 IAQRERRAALTDFERFQVM 121
>SPAC1805.13 [J] KOG3421 60S ribosomal protein L14
Length = 134
Score = 87.4 bits (215), Expect = 5e-18
Identities = 43/96 (44%), Positives = 64/96 (65%), Gaps = 2/96 (2%)
Query: 29 FTNKISMTLTCLILISFQALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKW 88
+T K+++ + I+ +ALID P + PRQ I G VVLT + +PRGA+S V+KKW
Sbjct: 21 YTGKLAVIVD--IVDHKRALIDSPCSEFPRQVIRYGSVVLTHIVMKLPRGARSGIVAKKW 78
Query: 89 AAAGVSEKWATSSWAKKIAQRERRAALSDFERFQVL 124
A V KWA+S+WAKK+ ++ R+ L+DF+RF V+
Sbjct: 79 KAQDVCNKWASSAWAKKLEAKKVRSQLNDFDRFAVM 114
>Hs20555164 [J] KOG3421 60S ribosomal protein L14
Length = 215
Score = 73.2 bits (178), Expect = 1e-13
Identities = 34/79 (43%), Positives = 49/79 (61%)
Query: 46 QALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKK 105
+AL+DGP T V RQA+ + LT P A+ V + W A ++ KWA + WAKK
Sbjct: 35 RALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVQQAWQKADINTKWAATRWAKK 94
Query: 106 IAQRERRAALSDFERFQVL 124
I RER+A ++DF+RF+V+
Sbjct: 95 IEARERKAKMTDFDRFKVM 113
>Hs16753225 [J] KOG3421 60S ribosomal protein L14
Length = 216
Score = 71.6 bits (174), Expect = 3e-13
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 46 QALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKK 105
+AL+DGP T V RQA+ + LT P A V + W A ++ KWA + WAKK
Sbjct: 35 RALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSAHQKYVRQAWQKADINTKWAATRWAKK 94
Query: 106 IAQRERRAALSDFERFQVL 124
I RER+A ++DF+RF+V+
Sbjct: 95 IEARERKAKMTDFDRFKVM 113
>7295067 [J] KOG3421 60S ribosomal protein L14
Length = 166
Score = 60.5 bits (145), Expect = 7e-10
Identities = 28/78 (35%), Positives = 43/78 (54%)
Query: 46 QALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKK 105
+ L+DGP TGVPRQ L + LT P A + V K W + + +W S W+ K
Sbjct: 35 RVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVK 94
Query: 106 IAQRERRAALSDFERFQV 123
+R++L+DF+RF++
Sbjct: 95 AQNICKRSSLNDFDRFKL 112
>CE19677 [J] KOG3421 60S ribosomal protein L14
Length = 135
Score = 58.9 bits (141), Expect = 2e-09
Identities = 31/76 (40%), Positives = 46/76 (59%)
Query: 49 IDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKKIAQ 108
IDGP++ V R NL + LT + G ++ V + AA V+E + + WAKKIAQ
Sbjct: 38 IDGPSSDVTRTVRNLKDLQLTKFVLKLRVGQRTKGVKAAFDAAKVTENFQKTQWAKKIAQ 97
Query: 109 RERRAALSDFERFQVL 124
R RA L+DFER++++
Sbjct: 98 RAIRAKLTDFERYKLM 113
>At2g20450 [J] KOG3421 60S ribosomal protein L14
Length = 134
Score = 55.8 bits (133), Expect = 2e-08
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 46 QALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKK 105
+AL+D P + R +NL ++ LT + + R K + + A V KW SSW +K
Sbjct: 35 RALVDAPD--MERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRK 92
Query: 106 IAQRERRAALSDFERFQVL 124
+ ++RRAAL+DF+RF+++
Sbjct: 93 LIVQKRRAALNDFDRFKIM 111
>At4g27090 [J] KOG3421 60S ribosomal protein L14
Length = 134
Score = 52.0 bits (123), Expect = 3e-07
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 46 QALIDGPTTGVPRQAINLGQVVLTPLTFAVPRGAKSATVSKKWAAAGVSEKWATSSWAKK 105
+AL+D P + R +N ++ LT + + R K + + A V KW SSW +K
Sbjct: 35 RALVDAPD--MERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRK 92
Query: 106 IAQRERRAALSDFERFQVL 124
+ ++RRA L+DF+RF+++
Sbjct: 93 LIVQKRRANLNDFDRFKIM 111
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,596,758
Number of Sequences: 60738
Number of extensions: 174556
Number of successful extensions: 403
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 394
Number of HSP's gapped (non-prelim): 9
length of query: 141
length of database: 30,389,216
effective HSP length: 95
effective length of query: 46
effective length of database: 24,619,106
effective search space: 1132478876
effective search space used: 1132478876
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)