ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII3443 good J KOG0832 Translation, ribosomal structure and biogenesis Mitochondrial/chloroplast ribosomal protein S2
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII3443 1183822 1182605 -406
(406 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHL004w [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2 395 e-110
SPAC24C9.10c [J] KOG0832 Mitochondrial/chloroplast ribosomal pro... 218 2e-56
AtCh012 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2 110 5e-24
CE14030 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2 103 5e-22
Hs7705805 [J] KOG0832 Mitochondrial/chloroplast ribosomal protei... 97 3e-20
7295664 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2 92 2e-18
Hs22053888 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 74 3e-13
At3g04770 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin rec... 74 5e-13
Hs16162649 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 72 1e-12
Hs9845502 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin rec... 72 1e-12
SPBC685.06 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 71 3e-12
Hs20550025 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 70 6e-12
Hs13636157 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 70 6e-12
At3g03600 [J] KOG0832 Mitochondrial/chloroplast ribosomal protei... 70 6e-12
At1g72370 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin rec... 70 7e-12
YGR214w [J] KOG0830 40S ribosomal protein SA (P40)/Laminin recep... 69 1e-11
Hs15302086 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 69 2e-11
7290175 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin recep... 69 2e-11
SPAPJ698.02c [J] KOG0830 40S ribosomal protein SA (P40)/Laminin ... 68 2e-11
Hs14740676 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 68 2e-11
Hs13642851 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 68 2e-11
YLR048w [J] KOG0830 40S ribosomal protein SA (P40)/Laminin recep... 68 3e-11
Hs20477356 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 67 4e-11
CE00854 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin recep... 67 6e-11
Hs14721839 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 64 3e-10
Hs17477588 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 60 8e-09
Hs18582389 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin re... 53 9e-07
>YHL004w [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2
Length = 394
Score = 395 bits (1016), Expect = e-110
Identities = 203/353 (57%), Positives = 262/353 (73%), Gaps = 5/353 (1%)
Query: 53 DVAAARQSEFNGSISQLLHQAMNTPIEE-LGDLETKLKSP-LTEKEQQLDEKLTAFLRKY 110
+V +Q I L P +E L +L+ L+ L++KEQQL+ +L+ F R Y
Sbjct: 41 EVMLLQQKLLYDEIRSELKSLSQVPEDEILPELKKSLEQDKLSDKEQQLEAELSDFFRNY 100
Query: 111 SKYNKVLDLPEDTNKFDFSSKVLSQPLHTREFPYLSHTSKEKPYSEQELYVRQLKHAAHT 170
+ NK+ D + SS + T+ +P L ++ +KPYS QEL++RQL H+ T
Sbjct: 101 ALLNKLFDSKTLDGQ---SSTTTAAATPTKPYPNLIPSANDKPYSSQELFLRQLNHSMRT 157
Query: 171 SKLGANIQDVYFPHKDVFNPPSLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGI 230
+KLGA I VY+PHKD+F PP + +++E LM+AGVHLGQST+LWR+STQ YIYGEYKGI
Sbjct: 158 AKLGATISKVYYPHKDIFYPPLPENITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGI 217
Query: 231 HIIDLNQTLSHLKRAAQVVEGVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVP 290
HIIDLNQTLS+LKRAA+VVEGV+E+GG+ILFLGTR+GQKR L +AA++ +GYYV+++W+P
Sbjct: 218 HIIDLNQTLSYLKRAAKVVEGVSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIP 277
Query: 291 GTLTNPTEISSSWERHEVDYFGNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMK 350
GTLTN TEIS WE+ E+D NPT R L+ NE+ +KPDLLVVLNPTENRNAL EA+K
Sbjct: 278 GTLTNSTEISGIWEKQEIDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIK 337
Query: 351 ARVPTIGIIDTDSEPSLVTYPIPANDDSLRSVSLLTSILAKAGERGVQTRLNR 403
+RVPTI IIDTDSEPSLVTYPIP NDDSLRSV+ L +LA+AG+RG+Q RL R
Sbjct: 338 SRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLAR 390
>SPAC24C9.10c [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2
Length = 263
Score = 218 bits (554), Expect = 2e-56
Identities = 107/244 (43%), Positives = 159/244 (64%), Gaps = 2/244 (0%)
Query: 155 SEQELYVRQLKHAAHTSKLGANIQDVYFPHKDVFNPPSLQQVSIEKLMAAGVHLGQSTAL 214
S ++L R+LK K+GA + Y P + NP Q+S+ L+++G HLG ST++
Sbjct: 7 SPEQLVARRLKIRDWNHKIGAVVAPHYSPTLSIRNPAPPSQLSLPLLLSSGAHLGHSTSI 66
Query: 215 WRASTQPYIYGEYKGIHIIDLNQTLSHLKRAAQVVEGVAENGGLILFLGTREGQKRTLIK 274
W TQP+IYG+ +GIHII L+QT+ +L+RA VV +A+ G+ILF+GTR GQK +++
Sbjct: 67 WNPYTQPFIYGKREGIHIISLDQTMVYLRRAISVVRSIAKENGIILFIGTRNGQKDSVVA 126
Query: 275 AAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYFGNPTGRELTLNESMSIIKPDLLV 334
AA+R GY++ +W+PG LTN E+ + + G+ + ++ S + PDL+V
Sbjct: 127 AAKRARGYHIFDRWLPGLLTNAREVQGKLGGSIL--CKDNRGKLIQTDKKPSYVFPDLMV 184
Query: 335 VLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYPIPANDDSLRSVSLLTSILAKAGE 394
+LNP EN++A EA K VPTIGIIDTD++P +VTYPIPANDDSLR L+ +L++ E
Sbjct: 185 ILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDSLRCTDLIAGLLSRVAE 244
Query: 395 RGVQ 398
+ Q
Sbjct: 245 QEYQ 248
>AtCh012 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2
Length = 236
Score = 110 bits (274), Expect = 5e-24
Identities = 67/217 (30%), Positives = 103/217 (46%), Gaps = 20/217 (9%)
Query: 196 VSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNQTLSHLKRAAQVVEGVAEN 255
+ +E++M AGVH G T W PYI + KGIHII+L +T L A +V A
Sbjct: 8 IDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASR 67
Query: 256 GGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWER-------HEV 308
G L +GT+ + +AA R +YV KW+ G LTN + + +
Sbjct: 68 GKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQKT 127
Query: 309 DYFGN-PTGRELTLNESMSIIK------------PDLLVVLNPTENRNALKEAMKARVPT 355
+ F P L +S ++ PD++++L+ E AL+E + +PT
Sbjct: 128 EGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPT 187
Query: 356 IGIIDTDSEPSLVTYPIPANDDSLRSVSLLTSILAKA 392
I +IDT+ P L IPANDD++ S+ + + L A
Sbjct: 188 ISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFA 224
>CE14030 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2
Length = 264
Score = 103 bits (257), Expect = 5e-22
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 21/217 (9%)
Query: 184 HKDVFNPPSLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNQTLSHLK 243
H+D+FN + V I+++ A +H G + + +YGE G+ + DL+ T +L
Sbjct: 62 HEDLFNFEKM--VHIDEMFKARLHYGHKVGTVNNNMKWALYGERLGVCLFDLDITKKYLV 119
Query: 244 RAAQVVEGVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSW 303
RA V V+ GG+ILF+ + + KAA+ V Y KW GTLTN ++
Sbjct: 120 RALNFVAHVSLRGGMILFVTSNRDTMFDVEKAADEVGQYSHVRKWQSGTLTNTRQL---- 175
Query: 304 ERHEVDYFGNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDS 363
G + L +++ L + + EN A+ EA K +PTIG++D++S
Sbjct: 176 -----------LGASVRLPDAVCF----LSTLTSLGENHPAIVEAAKMAIPTIGVVDSNS 220
Query: 364 EPSLVTYPIPANDDSLRSVSLLTSILAKAGERGVQTR 400
+P+ +TY +PANDD+ +S L + +A +G + R
Sbjct: 221 DPAYLTYLVPANDDTPQSTEYLLRMFKEAVRKGQEER 257
>Hs7705805 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2
Length = 296
Score = 97.4 bits (241), Expect = 3e-20
Identities = 72/221 (32%), Positives = 102/221 (45%), Gaps = 29/221 (13%)
Query: 184 HKDVFNPPSLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNQTLSHLK 243
H D FN L S+ L A VHLG +PYI+G IIDL QT +HL+
Sbjct: 69 HSDFFNVKEL--FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQ 126
Query: 244 RAAQVVEGVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSW 303
A +A G+ILF+ +R Q LI+ R G Y +++ G + +
Sbjct: 127 LALNFTAHMAYRKGIILFI-SRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARL---- 181
Query: 304 ERHEVDYFGNPTGRELTLNESMSIIKPDLLVVLNPTEN----RNALKEAMKARVPTIGII 359
FG PT R PDL++ L+ N A+++A K +PT+GI+
Sbjct: 182 ------LFG-PTVR-----------LPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIV 223
Query: 360 DTDSEPSLVTYPIPANDDSLRSVSLLTSILAKAGERGVQTR 400
DT+ P L+TYP+P NDDS +V L + A R + R
Sbjct: 224 DTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKR 264
>7295664 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2
Length = 250
Score = 91.7 bits (226), Expect = 2e-18
Identities = 64/230 (27%), Positives = 98/230 (41%), Gaps = 29/230 (12%)
Query: 175 ANIQDVYFPHKDVFNPPSLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIID 234
A ++ H D F +L ++ L A VH G +PY++G G I D
Sbjct: 25 ALVEQRILKHPDYFQVHNL--FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFD 82
Query: 235 LNQTLSHLKRAAQVVEGVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLT 294
L++T SHL+ A +A G+ILF + + A+ + W G T
Sbjct: 83 LDKTASHLRDALNFAAHIAFRDGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFT 142
Query: 295 NPTEISSSWERHEVDYFGNPTGRELTLNESMSIIKPDLLVVLNPTEN----RNALKEAMK 350
N + R PDL + LN N A+++A K
Sbjct: 143 NANVQFDAVTR-----------------------LPDLCIFLNTQNNVMAQHTAVRDAAK 179
Query: 351 ARVPTIGIIDTDSEPSLVTYPIPANDDSLRSVSLLTSILAKAGERGVQTR 400
+PTIGI+D++ P+L+TYP+P NDDS +V L ++ +A RG + R
Sbjct: 180 MAIPTIGIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRER 229
>Hs22053888 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 74.3 bits (181), Expect = 3e-13
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K +AAG HLG + ++ + YIY GI+II+L +T L AA+ +
Sbjct: 10 IKEEDVLKFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R +R ++K A +A ++ PGT TN + ++ WE
Sbjct: 68 I-ENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQ-AAFWE------- 118
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
P LLVV +P + L EA +PTI + +TDS V
Sbjct: 119 ------------------PRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLCYVDIA 160
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ SV L+ +LA+
Sbjct: 161 IPCNNKGAHSVGLMWWMLAR 180
>At3g04770 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 280
Score = 73.6 bits (179), Expect = 5e-13
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 30/201 (14%)
Query: 192 SLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVE 250
S ++ I+ +++A VHLG ++ + Y++ GI+II+L +T L+ AA+V+
Sbjct: 14 SEKEADIQMMLSADVHLGTKNCNYQM--ERYVFKRRDDGIYIINLGKTWDKLQMAARVIV 71
Query: 251 GVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDY 310
+ EN I+ R +R ++K A+ +A + PGT TN + S S
Sbjct: 72 AI-ENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFS-------- 122
Query: 311 FGNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTY 370
+P LL++ +P + +KE +PTI DTDS V
Sbjct: 123 ------------------EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDI 164
Query: 371 PIPANDDSLRSVSLLTSILAK 391
IPAN+ S+ L +LA+
Sbjct: 165 GIPANNKGKHSIGCLFWLLAR 185
>Hs16162649 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 72.4 bits (176), Expect = 1e-12
Identities = 57/200 (28%), Positives = 90/200 (44%), Gaps = 30/200 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K + AG HLG + ++ + YIY GI+II+L +T L AA+ +
Sbjct: 10 MKEEDVLKFLVAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLAARAIIA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R +R ++K A +A + PGT TN + + WE
Sbjct: 68 I-ENPADVSVISSRNTGQRAVLKFAAATEATPIAGHFTPGTFTNQIQ-ADFWE------- 118
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
P LLVV +P + L EA +PTI + +TDS V
Sbjct: 119 ------------------PRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIA 160
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ RSV L+ LA+
Sbjct: 161 IPCNNQGARSVGLMWWTLAR 180
>Hs9845502 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 72.0 bits (175), Expect = 1e-12
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K +AAG HLG + ++ + YIY GI+II+L +T L AA+ +
Sbjct: 10 MKEEDVLKFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R +R ++K A +A ++ PGT TN +I +++
Sbjct: 68 I-ENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTN--QIQAAFR------- 117
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
+P LLVV +P + L EA +PTI + +TDS V
Sbjct: 118 -----------------EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIA 160
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ SV L+ +LA+
Sbjct: 161 IPCNNKGAHSVGLMWWMLAR 180
>SPBC685.06 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 292
Score = 70.9 bits (172), Expect = 3e-12
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 198 IEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEGVAENG 256
I++L+AA H+G R Y++ G+HI++L +T L AA+V+ + EN
Sbjct: 17 IKQLLAANCHIGSKNLEVRMDN--YVWKRRSDGVHILNLGKTWEKLVLAARVIATI-ENP 73
Query: 257 GLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYFGNPTG 316
+ + TR R ++K A +A ++ PG TN + T
Sbjct: 74 ADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTN---------------YITRTY 118
Query: 317 RELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYPIPAND 376
RE P L+VV +P + A+KEA +P I + DTDS + V IP N+
Sbjct: 119 RE-----------PRLIVVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNN 167
Query: 377 DSLRSVSLLTSILAK 391
+S+ L+ +LA+
Sbjct: 168 KGRKSIGLIWYLLAR 182
>Hs20550025 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 70.1 bits (170), Expect = 6e-12
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K +AAG HLG + ++ + YIY GI+II+L +T L A+ +
Sbjct: 10 MKEEDVLKFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLTARAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R +R ++K A +A ++ PGT TN +I +++
Sbjct: 68 I-ENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTN--QIQAAFR------- 117
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
+P LLVV +P + L EA +PTI + +TDS V
Sbjct: 118 -----------------EPRLLVVSDPRADHQPLTEASYVNLPTIALCNTDSPLHYVDIA 160
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ SV L+ +LA+
Sbjct: 161 IPCNNKGTHSVGLMWWMLAR 180
>Hs13636157 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 261
Score = 70.1 bits (170), Expect = 6e-12
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K +AAG HLG + ++ + YIY GI+II+L +T L AA+ +
Sbjct: 10 MKEEDVLKFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R +R ++K A +A ++ PGT N +I +++
Sbjct: 68 I-ENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFAN--QIQAAFR------- 117
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
+P LLVV +P + L EA +PTI + +TDS V
Sbjct: 118 -----------------EPRLLVVTDPRADHQPLMEASYVNLPTIALCNTDSPLHYVDIA 160
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ SV L+ +LA+
Sbjct: 161 IPCNNKGAHSVGLMWWMLAR 180
>At3g03600 [J] KOG0832 Mitochondrial/chloroplast ribosomal protein S2
Length = 219
Score = 70.1 bits (170), Expect = 6e-12
Identities = 58/203 (28%), Positives = 90/203 (43%), Gaps = 25/203 (12%)
Query: 198 IEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNQTLSHLKRAAQVVEGVAENGG 257
I+KL+ G HLG+ A + Y YG G+ IID ++TL L+ AA V +A G
Sbjct: 8 IQKLLNTGAHLGRRAA--EHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVANLAHMRG 65
Query: 258 LILFLGTREGQKRTLIKAAERVNG-----YYVASKW-VPGTLTNPTEISSSWERHEVDYF 311
I F+ T + + R+ G + W + G LTN RH+ F
Sbjct: 66 NIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRSRHKKLCF 125
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSL---V 368
G T PD +VV + + + EA K ++P + I+D + +
Sbjct: 126 GPTT-------------MPDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKI 172
Query: 369 TYPIPANDDSLRSVSLLTSILAK 391
TYP+PA DS++ V L +++ K
Sbjct: 173 TYPVPAR-DSVKFVYLFCNVITK 194
>At1g72370 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 298
Score = 69.7 bits (169), Expect = 7e-12
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 192 SLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVE 250
S ++ + + AA VHLG ++ + Y++ GI+I +L +T L+ AA+V+
Sbjct: 13 SQKEADVRMMCAAEVHLGTKNCNYQM--ERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70
Query: 251 GVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDY 310
+ EN I+ R +R ++K A+ +A + PGT TN + S S
Sbjct: 71 AI-ENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFS-------- 121
Query: 311 FGNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTY 370
+P LL++ +P + +KE +P I DTDS V
Sbjct: 122 ------------------EPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDI 163
Query: 371 PIPANDDSLRSVSLLTSILAK 391
IPAN+ S+ L +LA+
Sbjct: 164 GIPANNKGKHSIGCLFWLLAR 184
>YGR214w [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 252
Score = 68.9 bits (167), Expect = 1e-11
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 201 LMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEGVAENGGLI 259
L+AA HLG + +PY++ G+H+I++ +T L AA+++ + N +
Sbjct: 17 LLAANTHLGARNV--QVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP-NPEDV 73
Query: 260 LFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYFGNPTGREL 319
+ + +R +R ++K A +A ++ PG+ TN
Sbjct: 74 VAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYI---------------------- 111
Query: 320 TLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYPIPANDDSL 379
+ S +P L++V +P + A+KEA +P I + D DS V IP N+
Sbjct: 112 ----TRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGK 167
Query: 380 RSVSLLTSILAK 391
S+ L+ +LA+
Sbjct: 168 HSIGLIWYLLAR 179
>Hs15302086 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 68.6 bits (166), Expect = 2e-11
Identities = 55/200 (27%), Positives = 92/200 (45%), Gaps = 30/200 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K +AAG HLG + ++ + YIY GI+II+L +T L AA +
Sbjct: 10 MREEDVLKFLAAGTHLGGTNLDFQM--EQYIYERKSDGIYIINLKRTWEKLLLAAHAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R + ++K A +A ++ PGT TN +I +++
Sbjct: 68 I-ENPADVSVISSRNTGQTAVLKFAAATGATPIAGRFTPGTFTN--QIQAAFR------- 117
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
+P LLVV +P + L EA +PTI + +TDS V
Sbjct: 118 -----------------EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIA 160
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ SV L+ +LA+
Sbjct: 161 IPCNNKGAYSVGLMWWMLAR 180
>7290175 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 330
Score = 68.6 bits (166), Expect = 2e-11
Identities = 52/201 (25%), Positives = 92/201 (44%), Gaps = 30/201 (14%)
Query: 192 SLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVE 250
SL++ I K++ A HLG ++ + Y+Y G++I++L +T L+ AA+ +
Sbjct: 96 SLKEDDITKMLVATTHLGSENVNFQM--EQYVYKRRADGVNILNLGKTWEKLQLAARAIV 153
Query: 251 GVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDY 310
+ +N I + +R +R ++K A+ + +A ++ PG TN +
Sbjct: 154 AI-DNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ------------ 200
Query: 311 FGNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTY 370
P RE P LLVV +P + + EA +P I +TDS +
Sbjct: 201 ---PAFRE-----------PRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDI 246
Query: 371 PIPANDDSLRSVSLLTSILAK 391
IP N+ S S+ L+ +LA+
Sbjct: 247 AIPCNNKSAHSIGLMWWLLAR 267
>SPAPJ698.02c [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 287
Score = 68.2 bits (165), Expect = 2e-11
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 198 IEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEGVAENG 256
I+ L+AA H+G R Y++ GIHII+L +T L AA+V+ + EN
Sbjct: 18 IKNLLAADSHIGSKNLEVRMEN--YVWKRRSDGIHIINLGKTWEKLVLAARVIATI-ENP 74
Query: 257 GLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYFGNPTG 316
+ + +R R ++K A +A ++ PG TN + T
Sbjct: 75 ADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTN---------------YITRTY 119
Query: 317 RELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYPIPAND 376
RE P L++V +P + A+KEA +P I + DTDS + V IP N+
Sbjct: 120 RE-----------PRLIIVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDVAIPINN 168
Query: 377 DSLRSVSLLTSILAK 391
+S+ L +LA+
Sbjct: 169 KGYKSIGLAWYLLAR 183
>Hs14740676 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 68.2 bits (165), Expect = 2e-11
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNQTLSHLKRAAQVVEGV 252
+++ + K +AAG HLG T L Q + GI+II+L +T L AA + +
Sbjct: 10 MKEEDVLKFLAAGTHLG-GTNLDFQMEQYICKRKSNGIYIINLKRTWEKLLLAASAIVAI 68
Query: 253 AENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYFG 312
EN + + +R +R ++K A +A + PGT TN +I +++
Sbjct: 69 -ENPADVSVISSRNTGQRAVLKFAAATGATPIAGHFTPGTFTN--QIQAAFR-------- 117
Query: 313 NPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYPI 372
+P LLVV +P + L EA +PTI + +TDS V I
Sbjct: 118 ----------------EPWLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPMRYVDIAI 161
Query: 373 PANDDSLRSVSLLTSILAK 391
P N+ SV L+ +LA+
Sbjct: 162 PCNNKGAHSVGLMWWMLAR 180
>Hs13642851 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 68.2 bits (165), Expect = 2e-11
Identities = 55/199 (27%), Positives = 92/199 (45%), Gaps = 30/199 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K +AAG HLG + ++ + YIY GI+II+L +T L AA+ +
Sbjct: 10 MKEEDVLKFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R +R ++K A +A + PGT TN +I ++++
Sbjct: 68 I-ENPADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTN--QIQAAFQ------- 117
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
+P LLVV +P + EA +PTI + +TDS V
Sbjct: 118 -----------------EPRLLVVTDPRADHQPFTEASYVNLPTIALCNTDSPLRYVHIA 160
Query: 372 IPANDDSLRSVSLLTSILA 390
IP N+ SV L+ +LA
Sbjct: 161 IPCNNKGAHSVGLMWWMLA 179
>YLR048w [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 252
Score = 67.8 bits (164), Expect = 3e-11
Identities = 47/192 (24%), Positives = 83/192 (42%), Gaps = 30/192 (15%)
Query: 201 LMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEGVAENGGLI 259
L+AA HLG + +PY++ G+H+I++ +T L AA+++ + ++
Sbjct: 17 LLAANTHLGARNV--QVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVV 74
Query: 260 LFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYFGNPTGREL 319
GQ R ++K A +A ++ PG+ TN
Sbjct: 75 AISSRTYGQ-RAVLKFAAHTGATPIAGRFTPGSFTNYI---------------------- 111
Query: 320 TLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYPIPANDDSL 379
+ S +P L++V +P + A+KEA +P I + D DS V IP N+
Sbjct: 112 ----TRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGK 167
Query: 380 RSVSLLTSILAK 391
S+ L+ +LA+
Sbjct: 168 HSIGLIWYLLAR 179
>Hs20477356 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 294
Score = 67.4 bits (163), Expect = 4e-11
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 200 KLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEGVAENGGL 258
K +AAG HLG + ++ + YIY GI+II+L +T L A + + + EN
Sbjct: 16 KFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLAGRAIVAI-ENPAD 72
Query: 259 ILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYFGNPTGRE 318
+ + +R +R ++K A +A ++ PGT TN + +
Sbjct: 73 VSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNRIQAAFR---------------- 116
Query: 319 LTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYPIPANDDS 378
+P L+VV +P + L EA +PTI + +TDS V IP N+
Sbjct: 117 ----------EPRLVVVTDPRADHQPLTEASYVNLPTIALCNTDSPLCYVDIAIPCNNKG 166
Query: 379 LRSVSLLTSILAK 391
SV L+ +LA+
Sbjct: 167 THSVGLMWWMLAR 179
>CE00854 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 276
Score = 66.6 bits (161), Expect = 6e-11
Identities = 52/201 (25%), Positives = 94/201 (45%), Gaps = 30/201 (14%)
Query: 192 SLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGE-YKGIHIIDLNQTLSHLKRAAQVVE 250
+L + + KL+A HLG + ++ Q Y+Y + G +II++ +T L AA+ +
Sbjct: 9 ALTEEDVMKLLATQAHLGSTNLNFQM--QQYVYKRRFDGPNIINVKKTWEKLLLAARAIA 66
Query: 251 GVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDY 310
V EN ++ + R +R L+K A + ++ PG LTN +I +++
Sbjct: 67 AV-ENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTN--QIQKTFK------ 117
Query: 311 FGNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTY 370
+P LLV+ +P + A+ EA VP I ++T+S L+
Sbjct: 118 ------------------EPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDI 159
Query: 371 PIPANDDSLRSVSLLTSILAK 391
+P N+ RS+ L+ +LA+
Sbjct: 160 GVPCNNKGERSIGLMWWMLAR 180
>Hs14721839 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 295
Score = 64.3 bits (155), Expect = 3e-10
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + K +AAG HLG + ++ + YIY GI+II+L +T L AA+ +
Sbjct: 10 MKEEDVLKFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN + + +R +R ++K A +A + PGT TN + +
Sbjct: 68 I-ENPADVSVISSRNTGQRAMLKFAAATGATPIAGHFTPGTFTNRIQAAFR--------- 117
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
+P L VV +P + L E +PTI + +TDS V
Sbjct: 118 -----------------EPQLPVVTDPRADHQPLTEVSYVNLPTIALCNTDSPLRYVDIA 160
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ SV + +LA+
Sbjct: 161 IPCNNKGAHSVGWMWWMLAQ 180
>Hs17477588 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 340
Score = 59.7 bits (143), Expect = 8e-09
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 229 GIHIIDLNQTLSHLKRAAQVVEGVAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKW 288
GIHII+L +T L +A+ + + EN + + +R +R ++K +A +
Sbjct: 90 GIHIINLKRTWEKLLLSARAIVAI-ENPADVSVISSRNTGQRAMLKFVAATGDTPIAGCF 148
Query: 289 VPGTLTNPTEISSSWERHEVDYFGNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEA 348
PGT TN + ++ WE P +LVV +P + L EA
Sbjct: 149 TPGTFTNQIQ-ATFWE-------------------------PRVLVVTDPRADHQPLMEA 182
Query: 349 MKARVPTIGIIDTDSEPSLVTYPIPANDDSLRSVSLLTSILA 390
+PTI + +TDS V IP N+ SV L+ +LA
Sbjct: 183 SYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLA 224
>Hs18582389 [J] KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1
Length = 210
Score = 52.8 bits (125), Expect = 9e-07
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 52/200 (26%)
Query: 193 LQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYK-GIHIIDLNQTLSHLKRAAQVVEG 251
+++ + +AAG HLG + ++ + YIY GI+II+L +T L AA +
Sbjct: 10 MKEDDVLTFLAAGTHLGGTNLDFQM--EQYIYKRKSDGIYIINLKRTWEKLPLAAHAIVA 67
Query: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWERHEVDYF 311
+ EN V+ +A ++PG+ TN +I ++++
Sbjct: 68 I-ENP----------------------VDQTPIAGHFIPGSFTN--QIQAAFQ------- 95
Query: 312 GNPTGRELTLNESMSIIKPDLLVVLNPTENRNALKEAMKARVPTIGIIDTDSEPSLVTYP 371
+P LLVV +P +R L EA +PTI + +TDS V
Sbjct: 96 -----------------EPWLLVVTDPRADRQPLTEASYVNLPTIALCNTDSPLRYVDID 138
Query: 372 IPANDDSLRSVSLLTSILAK 391
IP N+ SV L+ +LA+
Sbjct: 139 IPCNNKGAHSVGLMWWMLAR 158
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,120,424
Number of Sequences: 60738
Number of extensions: 985568
Number of successful extensions: 2402
Number of sequences better than 1.0e-05: 27
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2345
Number of HSP's gapped (non-prelim): 32
length of query: 406
length of database: 30,389,216
effective HSP length: 109
effective length of query: 297
effective length of database: 23,768,774
effective search space: 7059325878
effective search space used: 7059325878
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)