ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII3529   suspect: LH   E     KOG0806  Amino acid transport and metabolism                            Carbon-nitrogen hydrolase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII3529 1210580 1209342 -413 
         (413 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC23E6.03c [E] KOG0806 Carbon-nitrogen hydrolase                    108   2e-23

>SPBC23E6.03c [E] KOG0806 Carbon-nitrogen hydrolase
          Length = 286

 Score =  108 bits (269), Expect = 2e-23
 Identities = 70/221 (31%), Positives = 107/221 (47%), Gaps = 30/221 (13%)

Query: 10  LRIGIIQLNPQIGHTKETTSRAWKLLDELKSKNHGTASPDILVFPEFALTGYSFHDRNHI 69
           ++ G +Q  P++G   E      +LLD+    +    S  +LVFPE  LTGY+F +   I
Sbjct: 1   MKFGCVQFFPKLGKVNENIVHLRQLLDQ---HSEALQSVKLLVFPEMCLTGYNFKNSESI 57

Query: 70  LPYTCKPTEG--PTFDFAKEVSKTFNCYTVIGYPERCGDDDKTATLYNSAIMTDASGDLV 127
            P+    T    P+  FA+EVS+ + CYT+IG+PE   + +  +TLYNS  +     +L+
Sbjct: 58  QPFLENVTSNHCPSIQFAQEVSEQYRCYTIIGFPE-FQNSNGISTLYNSTALISPKKELL 116

Query: 128 FNYRKSFLYYTDDDWGCQENPNGFQHFEIPVKGFDVNGNSNDVKLKTGLGICMDLSNYKF 187
             Y K FL+ TD  W  +     F+   IP  G               + ICMD++ Y F
Sbjct: 117 NVYHKHFLFETDKSWATEGKGFSFEPC-IPELG------------PISMAICMDINPYDF 163

Query: 188 EAPFSDYEFATY---HLDH--------GTELLICPMAWLHS 217
           +APF  +E+A +    L+H           ++   MAWL S
Sbjct: 164 KAPFEKFEYANFILRELEHQQMVSSNVSRPIICLSMAWLVS 204


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.317    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,509,330
Number of Sequences: 60738
Number of extensions: 1203760
Number of successful extensions: 2515
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2511
Number of HSP's gapped (non-prelim): 2
length of query: 413
length of database: 30,389,216
effective HSP length: 109
effective length of query: 304
effective length of database: 23,768,774
effective search space: 7225707296
effective search space used: 7225707296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)