ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII3560 good HK KOG2598 Coenzyme transport and metabolism Phosphomethylpyrimidine kinase
r_klactII3560 good HK KOG2598 Transcription Phosphomethylpyrimidine kinase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII3560 1220237 1221853 539
(539 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL258c [HK] KOG2598 Phosphomethylpyrimidine kinase 301 1e-81
YOL055c [HK] KOG2598 Phosphomethylpyrimidine kinase 300 5e-81
YPR121w [HK] KOG2598 Phosphomethylpyrimidine kinase 258 1e-68
SPBP8B7.18c [HK] KOG2598 Phosphomethylpyrimidine kinase 201 3e-51
At1g22940 [HK] KOG2598 Phosphomethylpyrimidine kinase 123 6e-28
SPBP8B7.17c [HK] KOG2598 Phosphomethylpyrimidine kinase 108 2e-23
SPCC18B5.05c [HK] KOG2598 Phosphomethylpyrimidine kinase 70 8e-12
>YPL258c [HK] KOG2598 Phosphomethylpyrimidine kinase
Length = 551
Score = 301 bits (772), Expect = 1e-81
Identities = 189/535 (35%), Positives = 296/535 (55%), Gaps = 57/535 (10%)
Query: 51 SERKLPGVLTXXXXXXXXXXXXXXXVKTISAQGCYAMTCITALTCQTPGKVYSFINTDEQ 110
S KLP VL+ VKTI+A CYAMTCITAL QTP KVYS NT ++
Sbjct: 19 SNEKLPTVLSIAGTDPSGGAGVEADVKTITAHRCYAMTCITALNAQTPVKVYSINNTPKE 78
Query: 111 HIKEILGHNLRSMRCDAIKIGMLNLGALKAV---VSQLDQIKVPIVLDPVMVATSGSPLS 167
+ +IL NL+ M+CD IK GML A++ + + QL + + +V+DPV+VATSGS L+
Sbjct: 79 VVSQILDANLQDMKCDVIKTGMLTTAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLA 138
Query: 168 SGDVWESSEIKLLMDKVA----LITPNIPEAKALIRDESYDLKTVSDMVALSKRVAADCR 223
D+ L+ +K+A ++TPNIPE L+ E ++ + D+ ++K +A +
Sbjct: 139 GKDI-----ASLITEKIAPFADILTPNIPECFKLL-GEDREISKLRDIFEVAKDLAKITK 192
Query: 224 C-NVLLKGGHCP---IEGKVI-DVLFV--DGQVYIYNSDRLNSVNLHGTGCTLSSCIASK 276
C N+L+KGGH P EGK I DVL++ + + + + +N+ + HGTGCTL+S IAS
Sbjct: 193 CSNILVKGGHIPWNDEEGKYITDVLYLGAEQRFITFKGNFVNTTHTHGTGCTLASAIASN 252
Query: 277 LAYNVSLPEAVYQSIQYVHSAIICGENIKVTNCTENGPLNHIYS--------------TA 322
LA SLP++VY I+YV +A+ G ++ +NGP+NH+Y+ TA
Sbjct: 253 LARGYSLPQSVYGGIEYVQNAVAIGCDVTKETVKDNGPINHVYAIEIPLEKMLSDECFTA 312
Query: 323 KGIPHVSNVAMD---------YESMLALPSVKQSWENYINHEFVEMVSNGTMNMERFHKY 373
H V Y+ ++ P VK W++Y+NH+FV V++G++ ++F +
Sbjct: 313 SDAVHKKPVKSSLNKIPGGSFYKYLINHPKVKPHWDSYVNHDFVRKVADGSLEPKKFQFF 372
Query: 374 LKQDYNYLQVFARIHAKLAADTEDLEHFERETMVLQNIIHEMAKQESILGENI----KTH 429
++QDY YL +ARI + + LE E+E ++++ + + + + E L E +
Sbjct: 373 IEQDYLYLVNYARISCIAGSKSPCLEDLEKELVIVECVRNGLCQHERRLREEFGIKDPDY 432
Query: 430 VKSIE----MLNYTNYLKEVAQYGTWEQLYTASMPCCLGYVFAVRKIADKITVTEESHPD 485
++ I+ + Y Y +V++ G W++L A PC +GYV A+ KI D++T E S
Sbjct: 433 LQKIQRGPALRAYCRYFNDVSRRGNWQELVIALNPCLMGYVHALTKIKDEVTAAEGS--- 489
Query: 486 LY-QWLQEYLRPDFYEAALDGIKTLDIILK--QSHDAPTLVKIFQVVCDLECKFW 537
+Y +W + Y +EA L+G K L+ IL+ TLV I+ VC+LE FW
Sbjct: 490 VYREWCETYSSSWCHEAMLEGEKLLNHILETYPPEKLDTLVTIYAEVCELEANFW 544
>YOL055c [HK] KOG2598 Phosphomethylpyrimidine kinase
Length = 551
Score = 300 bits (767), Expect = 5e-81
Identities = 189/542 (34%), Positives = 295/542 (53%), Gaps = 56/542 (10%)
Query: 43 PLYLGTHWSERKLPGVLTXXXXXXXXXXXXXXXVKTISAQGCYAMTCITALTCQTPGKVY 102
P YL +E KLP VL+ VKTI+A CYAMTCITAL QTP KVY
Sbjct: 12 PPYLTLACNE-KLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVY 70
Query: 103 SFINTDEQHIKEILGHNLRSMRCDAIKIGMLNLGALKAV---VSQLDQIKVPIVLDPVMV 159
S NT ++ + + L NL+ M+C+ IK GML A++ + + QL + + +V+DPV+V
Sbjct: 71 SINNTPKEVVFQTLESNLKDMKCNVIKTGMLTAAAIEVLHEKLLQLGENRPKLVVDPVLV 130
Query: 160 ATSGSPLSSGDVWESSEIKLLMDKVA----LITPNIPEAKALIRDESYDLKTVSDMVALS 215
ATSGS L+ D+ + L+ +KVA ++TPNIPE L+ +E + + D+ ++
Sbjct: 131 ATSGSSLAGKDI-----VSLITEKVAPFADILTPNIPECYKLLGEER-KVNGLQDIFQIA 184
Query: 216 KRVAADCRC-NVLLKGGHCP----IEGKVIDVLFV--DGQVYIYNSDRLNSVNLHGTGCT 268
K +A +C N+L+KGGH P E + DVLF+ + + I+ + +N+ + HGTGCT
Sbjct: 185 KDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCT 244
Query: 269 LSSCIASKLAYNVSLPEAVYQSIQYVHSAIICGENIKVTNCTENGPLNHIYST----AKG 324
L+S IAS LA SLP++VY I+YV +A+ G ++ +NGP+NH+Y+ K
Sbjct: 245 LASAIASNLARGYSLPQSVYGGIEYVQNAVAIGCDVTKETVKDNGPINHVYAVEIPLEKM 304
Query: 325 IPHVSNVAMD-------------------YESMLALPSVKQSWENYINHEFVEMVSNGTM 365
+ A D YE ++ P VK W++YINHEFV+ V++GT+
Sbjct: 305 LSDECFTASDVIPKKPLKSAADKIPGGNFYEYLINHPKVKPHWDSYINHEFVKKVADGTL 364
Query: 366 NMERFHKYLKQDYNYLQVFARIHAKLAADTEDLEHFERETMVLQNIIHEMAKQE----SI 421
++F +++QDY YL +AR+H + LE E+E +++ + EM + E +
Sbjct: 365 ERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVIVGGVRTEMGQHEKRLKEV 424
Query: 422 LGENIKTHVKSIE----MLNYTNYLKEVAQYGTWEQLYTASMPCCLGYVFAVRKIADKIT 477
G + + I+ + Y+ Y +V++ G W++L + PC +GY A+ K+ K+T
Sbjct: 425 FGVKDPDYFQKIKRGPALRAYSRYFNDVSRRGNWQELVASLTPCLMGYGEALTKMKGKVT 484
Query: 478 VTEESHPDLYQWLQEYLRPDFYEAALDGIKTLDIILK--QSHDAPTLVKIFQVVCDLECK 535
E S ++W + Y + EA +G K L+ IL+ TLV I+ VC+LE
Sbjct: 485 APEGS--VYHEWCETYASSWYREAMDEGEKLLNHILETYPPEQLDTLVTIYAEVCELETN 542
Query: 536 FW 537
FW
Sbjct: 543 FW 544
>YPR121w [HK] KOG2598 Phosphomethylpyrimidine kinase
Length = 572
Score = 258 bits (660), Expect = 1e-68
Identities = 169/543 (31%), Positives = 285/543 (52%), Gaps = 59/543 (10%)
Query: 43 PLYLGTHWSERKLPGVLTXXXXXXXXXXXXXXXVKTISAQGCYAMTCITALTCQTPGKVY 102
P YL +E KLP V++ +KTI+A CYAMTC+T LT QTP KVY
Sbjct: 34 PPYLTLACNE-KLPTVMSIAGSDSSGGAGVEADIKTITAHRCYAMTCVTTLTAQTPVKVY 92
Query: 103 SFINTDEQHIKEILGHNLRSMRCDAIKIGMLNLGALKAV---VSQLDQIKVPIVLDPVMV 159
N ++ + +IL NL+ M+C+ IK GML + A++ + + QL + + +V+DPV+
Sbjct: 93 GAHNIPKKMVSQILDANLQDMKCNVIKTGMLTVDAIEVLHEKLLQLGENRPKLVIDPVLC 152
Query: 160 ATSGSPLSSGDVWESSEIKLLMDKVA----LITPNIPEAKALIRDESYDLKTVSDMVALS 215
A S S + DV + L+++K++ ++TPNI + L+ E+ ++ + D++ ++
Sbjct: 153 AASDSSPTGKDV-----VSLIIEKISPFADILTPNISDCFMLL-GENREVSKLQDVLEIA 206
Query: 216 KRVAADCRC-NVLLKGGHCPI----EGKVIDVLFV--DGQVYIYNSDRLNSVNLHGTGCT 268
K ++ C N+L+KGGH P E + DVL++ + + + +N+ HG GCT
Sbjct: 207 KDLSRITNCSNILVKGGHIPCDDGKEKHITDVLYLGAEQKFITFKGQFVNTTRTHGAGCT 266
Query: 269 LSSCIASKLAYNVSLPEAVYQSIQYVHSAIICGENIKVTNCTENGPLNHIYST----AKG 324
L+S IAS LA SL ++VY I+YV +AI G ++ + GP+NH+Y+ K
Sbjct: 267 LASAIASNLARGYSLSQSVYGGIEYVQNAIAIGCDV-TKKAVKVGPINHVYAVEIPLEKM 325
Query: 325 IPHVSNVAMD-------------------YESMLALPSVKQSWENYINHEFVEMVSNGTM 365
+ A D + ++ P VK W+ Y+NHEFV+ V++GT+
Sbjct: 326 LTDECFTASDAVPKKPIEGSLDKIPGGSFFNYLINHPKVKPHWDAYVNHEFVKRVADGTL 385
Query: 366 NMERFHKYLKQDYNYLQVFARIHAKLAADTEDLEHFERETMVLQNIIHEMAKQESILGEN 425
++F +++QDY YL + R+ + + LE E++ ++ +E+ + E L E
Sbjct: 386 ERKKFQFFIEQDYLYLIDYVRVCCVTGSKSPTLEDLEKDLVIADCARNELNEHERRLREE 445
Query: 426 I----KTHVKSIE----MLNYTNYLKEVAQYGTWEQLYTASMPCCLGYVFAVRKIADKIT 477
+++ I+ + Y YL ++++ G W+++ A PC +GYV+AV K+ DKIT
Sbjct: 446 FGVKDPDYLQKIKRGPALRAYCRYLIDISRRGNWQEIVVALNPCLMGYVYAVDKVKDKIT 505
Query: 478 VTEESHPDLY-QWLQEYLRPDFYEAALDGIKTLDIILK--QSHDAPTLVKIFQVVCDLEC 534
E S +Y +W Y+A L+G + ++ IL+ +LV IF C+LE
Sbjct: 506 AAEGS---IYSEWCDTCASSFCYQAVLEGERLMNHILETYPPDQLDSLVTIFARGCELET 562
Query: 535 KFW 537
FW
Sbjct: 563 NFW 565
>SPBP8B7.18c [HK] KOG2598 Phosphomethylpyrimidine kinase
Length = 551
Score = 201 bits (510), Expect = 3e-51
Identities = 156/521 (29%), Positives = 249/521 (46%), Gaps = 41/521 (7%)
Query: 46 LGTHWSERKLPGVLTXXXXXXXXXXXXXXXVKTISAQGCYAMTCITALTCQTPGKVYSFI 105
+G R LP LT +KT+++ G Y M+ IT L + G V S
Sbjct: 26 MGYTIKRRALPVSLTIAGSDCSGGAGIQADLKTMTSLGVYGMSAITCLVAENAGGVDSVE 85
Query: 106 NTDEQHIKEILGHNLRSMRCDAIKIGMLNLGAL-KAVVSQLDQIKVP-IVLDPVMVATSG 163
++ + +R + C +K GML + KAV + +V+DPVMVATSG
Sbjct: 86 EMSPAFVESQIDCCIRDIPCHVVKTGMLGSPEIVKAVARSAKKFNFSKLVVDPVMVATSG 145
Query: 164 SPLSSGDVWESSEIKLLMDKVALITPNIPEAKALIRDESYDLKTVSDMVALSKRVAADCR 223
L + D+ +LL L+TPNIPEA L +++ D+ ++ + + + A +
Sbjct: 146 DSLVTKDIVSVLNEELL-PLTYLVTPNIPEAIVLAKNQGLDISNINSVSDMERCAAVIHK 204
Query: 224 C---NVLLKGGHCPIEG-----------KVIDVLFVDGQVYIYNSDRLNSVNLHGTGCTL 269
+VLLKGGH P+ +V+D+L+ + Y ++S L +HGTGCTL
Sbjct: 205 LGPKHVLLKGGHMPVNNLGLKSSDDEDLRVVDILYDGNRFYHFSSSYLKKGEVHGTGCTL 264
Query: 270 SSCIASKLAYNVSLPEAVYQSIQYVHSAIICGENIKVTNCTENGPLNHIYSTAKGIPHVS 329
SS IAS LA+ SL EAV I YVH AI + + NC+ N LNH+ + + +P
Sbjct: 265 SSAIASFLAWEHSLTEAVQFGIDYVHGAIT--HSPPINNCSTN-ILNHM-TRLRIVPFAP 320
Query: 330 NVAMDYESMLALPSVKQSWENYINHEFVEMVSNGTMNMERFHKYLKQDYNYLQVFARIHA 389
++Y +L+ P V +W+ YINH+F M++ GT+ + F YLKQDY YL FAR ++
Sbjct: 321 GHFIEY--ILSHPQVVPAWKEYINHKFTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYS 378
Query: 390 KLAADTEDLEHFERETMVLQNIIHEMAKQE---------SILGENIKTHVKSIEMLNYTN 440
L E+ F Q++IH + ++E + +++K+ +S Y+
Sbjct: 379 -LKGYKENT--FPNILEAAQSVIHVIEEKELHVSMCSSYGVSLQDLKSCEESPACTAYSR 435
Query: 441 YLKEVAQYGTWEQLYTASMPCCLG-YVFAVRKIADKITVTEESHPDLYQWLQEYLRPDFY 499
Y+ + L PC +G YV A R + + + + +W+ Y D+
Sbjct: 436 YILDTGAAQDVAALDFVQAPCLIGYYVIAARLMKEPFRNPQGPY---QKWVDNYFCEDYL 492
Query: 500 EAALDGIKTL-DIILKQSHD-APTLVKIFQVVCDLECKFWD 538
A G + + +I+LK S + L++IF E FW+
Sbjct: 493 SAVRRGCRQIEEIVLKLSPERIQELIEIFIRATKFETLFWE 533
>At1g22940 [HK] KOG2598 Phosphomethylpyrimidine kinase
Length = 525
Score = 123 bits (309), Expect = 6e-28
Identities = 114/414 (27%), Positives = 187/414 (44%), Gaps = 33/414 (7%)
Query: 41 SSPLYLGTHWSERKLPGVLTXXXXXXXXXXXXXXXVKTISAQGCYAMTCITALTCQTPGK 100
S+ + T S RK+P VLT +K +A+G Y + ITA+T Q
Sbjct: 16 STTASMTTTESVRKVPQVLTVAGSDSGAGAGIQADLKVCAARGVYCASVITAVTAQNTRG 75
Query: 101 VYSFINTDEQHIKEILGHNLRSMRCDAIKIGML-NLGALKAVVSQLDQIKV--------- 150
V S + I E L L D +K GML + ++ ++ L V
Sbjct: 76 VQSVHLLPPEFISEQLKSVLSDFEFDVVKTGMLPSTEIVEVLLQNLSDFPVRGRDYLALF 135
Query: 151 PIVLDPVMVATSGSPLSSGDVWESSEIKLLMDKVALITPNIPEAKALIRDESYDLKTVSD 210
+V+DPVMV+TSG L+ + +LL +ITPN+ EA AL+ + + ++TV++
Sbjct: 136 SLVVDPVMVSTSGHVLAGSSILSIFRERLL-PIADIITPNVKEASALL--DGFRIETVAE 192
Query: 211 MVALSKRVAADCRCNVLLKGGHCPIEGKVIDVLFVDGQVYIYNSDRLNSVNLHGTGCTLS 270
M + +K + VL+KGG P +DV F + + S R+ + N HGTGCTL+
Sbjct: 193 MRSAAKSLHEMGPRFVLVKGGDLPDSSDSVDVYFDGKEFHELRSPRIATRNTHGTGCTLA 252
Query: 271 SCIASKLAYNVSLPEAVYQSIQYVHSAIICGENIKVTNCTENGPLNHIYSTAKGIPHVSN 330
SCIA++LA S+ AV + ++V +A+ ++I V GP +H + K P S
Sbjct: 253 SCIAAELAKGSSMLSAVKVAKRFVDNALDYSKDI-VIGSGMQGPFDHFFGLKKD-PQSSR 310
Query: 331 VAMDYESMLALPSVKQS-----WENYINHEFVEMVSNG-TMNMERFHKYLKQDYNYLQVF 384
++ L L +V S W I + G T+ RF +L++ + +
Sbjct: 311 CSIFNPDDLFLYAVTDSRMNKKWNRSIVDALKAAIEGGATIIQLRFDHFLEEAKACIDIC 370
Query: 385 A----------RIHAKLAADTEDLEHFERETMVLQNIIHEMAKQESILGENIKT 428
RI LA D + + + + V +++ + + I+G + KT
Sbjct: 371 RSHGVSLLINDRIDIALACDADGVHVGQSDMPV--DLVRSLLGPDKIIGVSCKT 422
>SPBP8B7.17c [HK] KOG2598 Phosphomethylpyrimidine kinase
Length = 506
Score = 108 bits (270), Expect = 2e-23
Identities = 98/430 (22%), Positives = 193/430 (44%), Gaps = 39/430 (9%)
Query: 76 VKTISAQGCYAMTCITALTCQTPGKVYSFINTDEQHIKEILGHNLRSMRCDAIKIGML-N 134
+K +A Y M+ +TA+T Q V ++++ + L + C+ +K GML N
Sbjct: 23 LKVFTAHSVYGMSAVTAITSQNTIGVNGVHLIPASYVEQQISACLLDVHCEVMKTGMLFN 82
Query: 135 LGALKAVVSQLDQIKVP-IVLDPVMVATSGSPLSSGDVWESSEIKLLMDKVALITPNIPE 193
LK +V +D+ K+ +V+DP++ G+ L D E +K L+ + ++ PNI E
Sbjct: 83 QQILKVIVESIDRFKIKKVVVDPLIATRKGALLVMPDYLELF-VKELIPRAEVLIPNIAE 141
Query: 194 AKALIR---DESYDLKTVSDMVALSKR-VAADCRCNVLLKGGHCPIEGKV---------- 239
A +++ +E ++ + D+ A+ K+ + A C+ NV+++ P
Sbjct: 142 ALIILKHMTNEFVEIHHLEDVKAVGKKLIKAGCK-NVVIRCDDIPFASDFFCSRETNMPP 200
Query: 240 ---IDVLFVDGQVYIYNSDRLNSVNLHGTGCTLSSCIASKLAYNVSLPEAVYQSIQYVHS 296
+ VL + L S GT C LSS +AS LA + L A ++ Y
Sbjct: 201 TWYLYVLCTSEGEVLLPQKWLASKTARGTSCALSSAVASNLAIGLDLVTATQNAVSYTQR 260
Query: 297 AIICGENIKVTNCTENGPLNHIYSTA-KGIPHVSNVAMDYESMLALPSVKQSWENYINHE 355
A+ ++ G + Y++A +P+ +++ + PS+ W + +NH
Sbjct: 261 ALEMSFHLG------RGANSLDYASALTRLPYEKGEFINF--VRYHPSITPKWLSIVNHP 312
Query: 356 FVEMVSNGTMNMERFHKYLKQDYNYLQVFARIHAKLAADTEDLEHFERETMVLQ-----N 410
FVE + GT++ F KYL Y+ L A+ +A + + E ++Q N
Sbjct: 313 FVEQLKAGTLSRLPFQKYLVLKYHMLINNAQAAGMMAFSSSSISAIEHSAKIIQAIKEEN 372
Query: 411 IIHEMAKQESILGENIKTHVKSIEMLNYTNYLKEVAQYGTWEQLYTASMPCCLGYVFAVR 470
+ H ++ L + T K + +++ ++ + AQ + A +P +VF ++
Sbjct: 373 VTHLRICEQYGLSASQITKSKPEIVKSHSLFIHDTAQQDGLRGIQIAMLP----FVFMIQ 428
Query: 471 KIADKITVTE 480
++ +I+ ++
Sbjct: 429 EVVSQISASD 438
>SPCC18B5.05c [HK] KOG2598 Phosphomethylpyrimidine kinase
Length = 327
Score = 70.1 bits (170), Expect = 8e-12
Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 48 THWSERKLPGVLTXXXXXXXXXXXXXXXVKTISAQGCYAMTCITALTCQTPGKVYSFINT 107
+H ++ P LT +K ++A Y M+ +TALTCQ +
Sbjct: 6 SHNAKTNHPTCLTIAGSDCSGAAGIQADLKVMTAHQVYGMSVLTALTCQNSHGITGIYPL 65
Query: 108 DEQHIKEILGHNLRSMRCDAIKIGMLNLGALKAVVSQ-LDQIKVP-IVLDPVMVATSGSP 165
I+ + L ++C +KIGML V+SQ L + K+ +V+D V++++ G+
Sbjct: 66 HPSLIQRQIDACLSDIQCRVVKIGMLPDPKSIPVISQALTKYKITDVVMDSVIISSMGNV 125
Query: 166 LSSGDVWESSEIKLLMDKVALITPNIPEAKALI----RDESYDLKTVSDMVALSKRVAAD 221
+ ++ I+ L + + N+ EA L+ + LK+ D+ L +
Sbjct: 126 MCETPTIPAT-IQHLFPHLLVYASNVMEAFILVEKTLKKSPPPLKSFPDIQNLMSIIHRL 184
Query: 222 CRCNVLLKGGHCPIEGKVI------------DVLFVDGQVYIYNSDRLNSVNLHGTGCTL 269
V+L+G H + ++ D+++ + YI+ + ++HG C+L
Sbjct: 185 GPKFVVLRGHHVAFDKNMMITEKPDSKSWTADLIYDGKEFYIFEKPYNTTKSIHGESCSL 244
Query: 270 SSCIASKLAYNVSLPEAVYQSIQYVHSAI 298
++ IAS LA N+ +A+++++ + AI
Sbjct: 245 TAAIASNLACNIPPLQAIHEALYSIEWAI 273
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,730,466
Number of Sequences: 60738
Number of extensions: 1224247
Number of successful extensions: 3314
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3277
Number of HSP's gapped (non-prelim): 7
length of query: 539
length of database: 30,389,216
effective HSP length: 111
effective length of query: 428
effective length of database: 23,647,298
effective search space: 10121043544
effective search space used: 10121043544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)