ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII3580   suspect: LH   S     KOG4774  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII3580 1230185 1229760 -142 
         (142 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YJR067c [S] KOG4774 Uncharacterized conserved protein                 102   1e-22
SPAC2C4.12c_2 [S] KOG4774 Uncharacterized conserved protein            53   1e-07

>YJR067c [S] KOG4774 Uncharacterized conserved protein
          Length = 141

 Score =  102 bits (255), Expect = 1e-22
 Identities = 59/133 (44%), Positives = 80/133 (59%), Gaps = 3/133 (2%)

Query: 9   ENIWGSDNEASTGPQESLEVKKLQQIHSKRGYLDGISSAKEENLQAGFDDTFPLGAKYGF 68
           +++W SD++  T  + S ++ KL++ HSKRGYLDGI S+KEE LQ GF+D FP GAK G 
Sbjct: 6   DDVWASDSDVET--ERSPDLVKLRENHSKRGYLDGIVSSKEEKLQEGFNDGFPTGAKLGK 63

Query: 69  QIGEIVGKLRLFTTLYGNADPQVAADLKQAQDELRINRVLSARHFDEELQPLDSLKVLLS 128
           Q+G I+G L    T +G+ D  ++     AQ ELRIN+VLS   FD     L     L++
Sbjct: 64  QVGIIMGILLGLRTRFGDEDEDLSKAYIDAQKELRINKVLSKSIFDPNFD-LQEKHPLIT 122

Query: 129 KWQARVLDYEGKY 141
           KW      Y  KY
Sbjct: 123 KWTDIANTYCEKY 135


>SPAC2C4.12c_2 [S] KOG4774 Uncharacterized conserved protein
          Length = 136

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)

Query: 27  EVKKLQQIHSKRGYLDGISSAKEENLQAGFDDTFPLGAKYGFQIGEIVGKLRLFTTLYGN 86
           E++ L++ HS  GY +GI   K +  Q+GFDD F  G++ GFQ+G+ +G L+    LY  
Sbjct: 39  ELELLEEKHSNFGYSEGIIKGKMQVAQSGFDDGFKHGSRLGFQMGKTIGTLK--AKLYIF 96

Query: 87  ADPQVAADLKQAQDELRIN---RVLSARHFDEELQ 118
            + +    LKQ  D L+ +    +  A H +E L+
Sbjct: 97  EENEQMEILKQELDRLQESAEFHIFVANHKEEILK 131


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.313    0.133    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,431,129
Number of Sequences: 60738
Number of extensions: 321210
Number of successful extensions: 656
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 654
Number of HSP's gapped (non-prelim): 2
length of query: 142
length of database: 30,389,216
effective HSP length: 96
effective length of query: 46
effective length of database: 24,558,368
effective search space: 1129684928
effective search space used: 1129684928
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)