ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0091 good K KOG0773 Transcription Transcription factor MEIS1 and related HOX domain proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0091 25132 25800 223
(223 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YCR039c [K] KOG0773 Transcription factor MEIS1 and related HOX d... 94 1e-19
YCL067c [K] KOG0773 Transcription factor MEIS1 and related HOX d... 94 1e-19
YCR096c [K] KOG0773 Transcription factor MEIS1 and related HOX d... 84 1e-16
ECU06g0740 [K] KOG0773 Transcription factor MEIS1 and related HO... 49 7e-06
>YCR039c [K] KOG0773 Transcription factor MEIS1 and related HOX domain
proteins
Length = 210
Score = 94.4 bits (233), Expect = 1e-19
Identities = 63/223 (28%), Positives = 120/223 (53%), Gaps = 22/223 (9%)
Query: 1 MSRIPIHSLLNPSESCKSISNVPSNYRDLSTFNKERAKVITTFQEMFYSMLENNDDYNKI 60
M++IPI LLNP + + S++ NK+ + ++ S+
Sbjct: 1 MNKIPIKDLLNPQITDEFKSSILD-------INKKLFSICCNLPKLPESVTTEE------ 47
Query: 61 ESLIRNFQPKLTWSHKCESLTFKQKAYLTAIIQKSIKSLLVLLKEKGKMREIEFSRKEVR 120
E +R+ L+ ++K ++ ++K L Q + ++ VLLKE MR IE R +
Sbjct: 48 EVELRDILGFLSRANKNRKISDEEKKLLQTTSQLTT-TITVLLKE---MRSIENDRSNYQ 103
Query: 121 KINKYRQSSKNFESVNIKILTQDLMHSNNNEFKKGKRFPKSHIQLLENWYSMNRRNPYLA 180
Q +K+ + + ++TQD+++ + ++ G RF K ++++LE+W++ N NPYL
Sbjct: 104 ----LTQKNKSADGLVFNVVTQDMINKSTKPYR-GHRFTKENVRILESWFAKNIENPYLD 158
Query: 181 ENDLAYISKNTTLTKTQIKNWLANRRRKDKITEVSSDIRNILN 223
L + KNT+L++ QIKNW++NRRRK+K ++ ++ ++L+
Sbjct: 159 TKGLENLMKNTSLSRIQIKNWVSNRRRKEKTITIAPELADLLS 201
>YCL067c [K] KOG0773 Transcription factor MEIS1 and related HOX domain
proteins
Length = 210
Score = 94.4 bits (233), Expect = 1e-19
Identities = 63/223 (28%), Positives = 120/223 (53%), Gaps = 22/223 (9%)
Query: 1 MSRIPIHSLLNPSESCKSISNVPSNYRDLSTFNKERAKVITTFQEMFYSMLENNDDYNKI 60
M++IPI LLNP + + S++ NK+ + ++ S+
Sbjct: 1 MNKIPIKDLLNPQITDEFKSSILD-------INKKLFSICCNLPKLPESVTTEE------ 47
Query: 61 ESLIRNFQPKLTWSHKCESLTFKQKAYLTAIIQKSIKSLLVLLKEKGKMREIEFSRKEVR 120
E +R+ L+ ++K ++ ++K L Q + ++ VLLKE MR IE R +
Sbjct: 48 EVELRDILGFLSRANKNRKISDEEKKLLQTTSQLTT-TITVLLKE---MRSIENDRSNYQ 103
Query: 121 KINKYRQSSKNFESVNIKILTQDLMHSNNNEFKKGKRFPKSHIQLLENWYSMNRRNPYLA 180
Q +K+ + + ++TQD+++ + ++ G RF K ++++LE+W++ N NPYL
Sbjct: 104 ----LTQKNKSADGLVFNVVTQDMINKSTKPYR-GHRFTKENVRILESWFAKNIENPYLD 158
Query: 181 ENDLAYISKNTTLTKTQIKNWLANRRRKDKITEVSSDIRNILN 223
L + KNT+L++ QIKNW++NRRRK+K ++ ++ ++L+
Sbjct: 159 TKGLENLMKNTSLSRIQIKNWVSNRRRKEKTITIAPELADLLS 201
>YCR096c [K] KOG0773 Transcription factor MEIS1 and related HOX domain
proteins
Length = 119
Score = 84.3 bits (207), Expect = 1e-16
Identities = 39/115 (33%), Positives = 73/115 (62%), Gaps = 5/115 (4%)
Query: 109 MREIEFSRKEVRKINKYRQSSKNFESVNIKILTQDLMHSNNNEFKKGKRFPKSHIQLLEN 168
MR IE R + Q +K+ + + ++TQD+++ + ++ G RF K ++++LE+
Sbjct: 1 MRSIENDRSNYQ----LTQKNKSADGLVFNVVTQDMINKSTKPYR-GHRFTKENVRILES 55
Query: 169 WYSMNRRNPYLAENDLAYISKNTTLTKTQIKNWLANRRRKDKITEVSSDIRNILN 223
W++ N NPYL L + KNT+L++ QIKNW++NRRRK+K ++ ++ ++L+
Sbjct: 56 WFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKTITIAPELADLLS 110
>ECU06g0740 [K] KOG0773 Transcription factor MEIS1 and related HOX domain
proteins
Length = 193
Score = 48.5 bits (114), Expect = 7e-06
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 38 KVITTFQEMFYSMLENNDDYNKIESLIRNFQPKLTWSHKCESL--TFKQKAYLTAIIQKS 95
+++ ++ F S + ++D ++ +I Q H + L + K L II+K
Sbjct: 7 EILIAKEKYFQSSINDHD----LKEIILKIQQDCITYHSTDLLGSSLLHKLILILIIEK- 61
Query: 96 IKSLLVLLKE------------KGKMREIEFSRKEVRKINKYRQSSKNFESVNIKILTQD 143
KSLL+ K + +M I + EV K +Y +S K S + LT
Sbjct: 62 FKSLLLFEKNIISIFDLECVNFQEEMNSIMYVMNEVEK--QYLRSDKF--STHNHSLTGG 117
Query: 144 LMHSNNNEFKKGKRFPKSHIQLLENWYSMNRRNPYLAENDLAYISKNTTLTKTQIKNWLA 203
L SN+ + FPK ++L W + PY ++ + +SK T L +QI NW A
Sbjct: 118 LFASNS--VIRRINFPKEISKILRKWLKKHLTYPYPSKIEKKMLSKETGLKLSQIDNWFA 175
Query: 204 NRRRK 208
N RR+
Sbjct: 176 NARRR 180
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.130 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,735,901
Number of Sequences: 60738
Number of extensions: 502411
Number of successful extensions: 2269
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2264
Number of HSP's gapped (non-prelim): 4
length of query: 223
length of database: 30,389,216
effective HSP length: 102
effective length of query: 121
effective length of database: 24,193,940
effective search space: 2927466740
effective search space used: 2927466740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)