ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII0128  good          S     KOG4604  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII0128  41149 40904 -82  
         (82 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPJ691.03 [S] KOG4604 Uncharacterized conserved protein              79   8e-16
Hs17439908_1 [S] KOG4604 Uncharacterized conserved protein             53   8e-08
CE25901 [S] KOG4604 Uncharacterized conserved protein                  48   2e-06
7292950 [S] KOG4604 Uncharacterized conserved protein                  46   8e-06

>SPAPJ691.03 [S] KOG4604 Uncharacterized conserved protein
          Length = 86

 Score = 79.3 bits (194), Expect = 8e-16
 Identities = 35/69 (50%), Positives = 52/69 (74%)

Query: 5  VQTTKAVPSILDKRWDVVLSNVVAKTALGAGVGIVASVLFFKRRAFPVWVGVGFGLGRGY 64
          + T+++    L+ +WDV LSN+V ++ +G G GIV+SVLFF+R A+PVW G+GFGLG+ Y
Sbjct: 1  MSTSQSSEQTLNYQWDVCLSNMVVQSGIGLGAGIVSSVLFFRRAAWPVWGGLGFGLGKSY 60

Query: 65 AEGDAIFRT 73
          A+ +A  RT
Sbjct: 61 ADSNARLRT 69


>Hs17439908_1 [S] KOG4604 Uncharacterized conserved protein
          Length = 70

 Score = 52.8 bits (125), Expect = 8e-08
 Identities = 25/53 (47%), Positives = 34/53 (63%)

Query: 13 SILDKRWDVVLSNVVAKTALGAGVGIVASVLFFKRRAFPVWVGVGFGLGRGYA 65
          S L ++WD  L++ V K   G G+GIV S+ FFKRR +P+  G G GLG  Y+
Sbjct: 4  SELGRKWDRCLADAVVKIGTGFGLGIVFSLTFFKRRMWPLAFGSGMGLGMAYS 56


>CE25901 [S] KOG4604 Uncharacterized conserved protein
          Length = 105

 Score = 48.1 bits (113), Expect = 2e-06
 Identities = 21/46 (45%), Positives = 30/46 (64%)

Query: 20 DVVLSNVVAKTALGAGVGIVASVLFFKRRAFPVWVGVGFGLGRGYA 65
          D   ++ + K   G  +GIVASV FFK R++P+W G G GLG G++
Sbjct: 22 DRCFADSLLKVTGGVAIGIVASVAFFKSRSWPIWFGSGVGLGTGWS 67


>7292950 [S] KOG4604 Uncharacterized conserved protein
          Length = 74

 Score = 46.2 bits (108), Expect = 8e-06
 Identities = 20/42 (47%), Positives = 29/42 (68%)

Query: 23 LSNVVAKTALGAGVGIVASVLFFKRRAFPVWVGVGFGLGRGY 64
          LS+ + K   G  +G V ++LFF+RR +PVW+G GFG+G  Y
Sbjct: 17 LSDSLVKGVGGLVIGSVVTLLFFRRRIWPVWLGTGFGVGVAY 58


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.323    0.138    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,199,985
Number of Sequences: 60738
Number of extensions: 135571
Number of successful extensions: 309
Number of sequences better than 1.0e-05: 4
Number of HSP's better than  0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 305
Number of HSP's gapped (non-prelim): 4
length of query: 82
length of database: 30,389,216
effective HSP length: 58
effective length of query: 24
effective length of database: 26,866,412
effective search space: 644793888
effective search space used: 644793888
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)