ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0155 good K KOG2097 Transcription Predicted N6-adenine methylase involved in transcription regulation
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0155 49512 50480 323
(323 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YCL055w [K] KOG2097 Predicted N6-adenine methylase involved in t... 478 e-135
At4g09980 [K] KOG2097 Predicted N6-adenine methylase involved in... 136 4e-32
Hs20536396 [K] KOG2097 Predicted N6-adenine methylase involved i... 130 3e-30
7297377 [K] KOG2097 Predicted N6-adenine methylase involved in t... 122 9e-28
>YCL055w [K] KOG2097 Predicted N6-adenine methylase involved in
transcription regulation
Length = 335
Score = 478 bits (1230), Expect = e-135
Identities = 211/298 (70%), Positives = 259/298 (86%)
Query: 22 EHVTLRPANEFHTNDHSNNYIHTGSLPQTHVRNIENTVDGYPKLQRLFSLKERQVMQFNT 81
+HV+ +P+ +FHTND+SNNYIH SLPQ HV NIEN VDGYPKLQ+LF K +Q+ QF T
Sbjct: 34 KHVSFKPSRDFHTNDYSNNYIHGKSLPQQHVTNIENRVDGYPKLQKLFQAKAKQINQFAT 93
Query: 82 KPFGCKVELDEIVPTLNDWVQKDGLTFDVVMIGCLTDNQFIYPLLTQLPIHKLISKPGFL 141
PFGCK+ +D IVPTLN W+Q + LTFDVVMIGCLT+NQFIYP+LTQLP+ +LISKPGFL
Sbjct: 94 TPFGCKIGIDSIVPTLNHWIQNENLTFDVVMIGCLTENQFIYPILTQLPLDRLISKPGFL 153
Query: 142 FVWGSAQKINELSRLLNNEIWAKKFRRSEELVFVPVNKNSPFYPGLEADDESLFEKMQWH 201
F+W ++QKINEL++LLNNEIWAKKFRRSEELVFVP++K SPFYPGL+ DDE+L EKMQWH
Sbjct: 154 FIWANSQKINELTKLLNNEIWAKKFRRSEELVFVPIDKKSPFYPGLDQDDETLMEKMQWH 213
Query: 202 CWMCITGTVRRATDGHLIHCNIDTDLAIESKNSKVGAIPNQLYKVAENFSTATRRLHIVP 261
CWMCITGTVRR+TDGHLIHCN+DTDL+IE+K++ GA+P+ LY++AENFSTATRRLHI+P
Sbjct: 214 CWMCITGTVRRSTDGHLIHCNVDTDLSIETKDTTNGAVPSHLYRIAENFSTATRRLHIIP 273
Query: 262 ARTGSETPIRMRPGWVIMGPDVLLDNFNAMEYKNEVGRVGSNLPKDPSIESLRPKSPI 319
ARTG ETP+++RPGWVI+ PDV+LDNF+ YK E+ +GSN+P IE LRP+SP+
Sbjct: 274 ARTGYETPVKVRPGWVIVSPDVMLDNFSPKRYKEEIANLGSNIPLKNEIELLRPRSPV 331
>At4g09980 [K] KOG2097 Predicted N6-adenine methylase involved in
transcription regulation
Length = 963
Score = 136 bits (343), Expect = 4e-32
Identities = 104/319 (32%), Positives = 159/319 (49%), Gaps = 50/319 (15%)
Query: 35 NDHSNNYIHTGSLPQTHVRNIENT-VDGYPKLQRLFSLKERQVMQFNTKPFGCKVELDEI 93
ND+S N++ TG PQ +R +E T V+ YPKL+ L K+ V + P K +L E+
Sbjct: 568 NDYSQNFVDTGMRPQNFIRELELTNVEDYPKLRELIQKKDEIVSNSASAPMYLKGDLHEV 627
Query: 94 VPTLNDWVQKDGLTFDVVMIGC-----------LTDNQ--FIYPLLTQLPIHKLISKPGF 140
+ + G FDV+++ ++D+ + + + L I + P F
Sbjct: 628 ELS----PELFGTKFDVILVDPPWEEYVHRAPGVSDSMEYWTFEDIINLKIEAIADTPSF 683
Query: 141 LFVW-GSAQKINELSRLLNNEIWAKKFRRSEELVFVPVNKNSPFYPGLEADDESLFEKMQ 199
LF+W G + + + L W FRR E++ +V NK++ P L D ++F++ +
Sbjct: 684 LFLWVGDGVGLEQGRQCLKK--WG--FRRCEDICWVKTNKSNAA-PTLRHDSRTVFQRSK 738
Query: 200 WHCWMCITGTVRRATDGHLIHCNIDTDLAIESKNSKVGAI--PNQLYKVAENFSTATRRL 257
HC M I GTVRR+TDGH+IH NIDTD+ I ++ G+ P +Y++ E+F+ RRL
Sbjct: 739 EHCLMGIKGTVRRSTDGHIIHANIDTDVII-AEEPPYGSTQKPEDMYRIIEHFALGRRRL 797
Query: 258 HIVPARTGSETPIRMRPGWVIMG---------PDVLLDNFNAMEYKNEVGRVGSNLPKD- 307
+ G + I R GW+ +G P + NF E K +G G N P D
Sbjct: 798 ELF----GEDHNI--RAGWLTVGKGLSSSNFEPQAYVRNFADKEGKVWLGGGGRNPPPDA 851
Query: 308 -------PSIESLRPKSPI 319
P IESLRPKSP+
Sbjct: 852 PHLVVTTPDIESLRPKSPM 870
>Hs20536396 [K] KOG2097 Predicted N6-adenine methylase involved in
transcription regulation
Length = 456
Score = 130 bits (327), Expect = 3e-30
Identities = 87/303 (28%), Positives = 158/303 (51%), Gaps = 38/303 (12%)
Query: 35 NDHSNNYIHTGSLPQTHVRNI--ENTVDGYPKLQRLFSLKERQVMQFNTKPFGCKVELDE 92
ND+ +++ TG PQ +R++ + + YPKL+ L LK+ + + NT P + +++
Sbjct: 117 NDYCQHFVDTGHRPQNFIRDVGLADRFEEYPKLRELIRLKDELIAKSNTPPMYLQADIEA 176
Query: 93 --------------IVPTLNDWVQKDGLTFDVVMIGCLTDNQFIYPLLTQLPIHKLISKP 138
+ P L ++ ++ G+T + + + + + +L I ++ +
Sbjct: 177 FDIRELTPKFDVILLEPPLEEYYRETGITAN--------EKCWTWDDIMKLEIDEIAAPR 228
Query: 139 GFLFVWGSAQKINELSRLLNNEIWAKKFRRSEELVFVPVNKNSPFYPGLEADDESLFEKM 198
F+F+W + + +L R+ + W +RR E++ ++ NKN+P D +++F++
Sbjct: 229 SFIFLWCGSGEGLDLGRVCLRK-WG--YRRCEDICWIKTNKNNPGKTKT-LDPKAVFQRT 284
Query: 199 QWHCWMCITGTVRRATDGHLIHCNIDTDLAIESKNSKVGAI--PNQLYKVAENFSTATRR 256
+ HC M I GTV+R+TDG IH N+D DL I ++ ++G I P +++ + E+F RR
Sbjct: 285 KEHCLMGIKGTVKRSTDGDFIHANVDIDLII-TEEPEIGNIEKPVEIFHIIEHFCLGRRR 343
Query: 257 LHIVPARTGSETPIRMRPGWVIMGPDVLLDNFNAMEYKNEVGRVGSNLPK-DPSIESLRP 315
LH+ G ++ I RPGW+ +GP + N+NA Y + S L IE LRP
Sbjct: 344 LHLF----GRDSTI--RPGWLTVGPTLTNSNYNAETYASYFSAPNSYLTGCTEEIERLRP 397
Query: 316 KSP 318
KSP
Sbjct: 398 KSP 400
>7297377 [K] KOG2097 Predicted N6-adenine methylase involved in
transcription regulation
Length = 397
Score = 122 bits (305), Expect = 9e-28
Identities = 90/307 (29%), Positives = 154/307 (49%), Gaps = 43/307 (14%)
Query: 35 NDHSNNYIHTGSLPQTHVRNI--ENTVDGYPKLQRLFSLKERQVMQFNTKPFGCKVELDE 92
ND+ +++ TG PQ +R++ + + YPKL+ L LK++ + + P K +L
Sbjct: 89 NDYCQHFVDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDKLIQDTASAPMYLKADLKS 148
Query: 93 I-VPTLNDWVQKDGLTFDVVMI-----------------GCLTDNQFIYPLLTQLPIHKL 134
+ V TL G FDV++I G + + + L + ++
Sbjct: 149 LDVKTL-------GAKFDVILIEPPLEEYARAAPSVATVGGAPRVFWNWDDILNLDVGEI 201
Query: 135 ISKPGFLFVW-GSAQKINELSRLLNNEIWAKKFRRSEELVFVPVNKNSPFYPGLEADDES 193
+ F+F+W GS++ ++ L W FRR E++ ++ N N P + + + ++
Sbjct: 202 AAHRSFVFLWCGSSEGLDMGRNCLKK--WG--FRRCEDICWIRTNINKPGH-SKQLEPKA 256
Query: 194 LFEKMQWHCWMCITGTVRRATDGHLIHCNIDTDLAIESKNSKVGAI--PNQLYKVAENFS 251
+F++ + HC M I GTVRR+TDG IH N+D DL I S+ + G+ P +++ + E+F
Sbjct: 257 VFQRTKEHCLMGIKGTVRRSTDGDFIHANVDIDLII-SEEEEFGSFEKPIEIFHIIEHFC 315
Query: 252 TATRRLHIVPARTGSETPIRMRPGWVIMGPDVLLDNFNAMEYKNEVGRVGSNLPKDPSIE 311
RRLH+ G ++ I RPGW+ +GP++ NFN+ Y+ + IE
Sbjct: 316 LGRRRLHLF----GRDSSI--RPGWLTVGPELTNSNFNSELYQTYFAEAPAT-GCTSRIE 368
Query: 312 SLRPKSP 318
LRPKSP
Sbjct: 369 LLRPKSP 375
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,716,021
Number of Sequences: 60738
Number of extensions: 915503
Number of successful extensions: 1882
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1865
Number of HSP's gapped (non-prelim): 4
length of query: 323
length of database: 30,389,216
effective HSP length: 106
effective length of query: 217
effective length of database: 23,950,988
effective search space: 5197364396
effective search space used: 5197364396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)