ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0192 good C KOG3440 Energy production and conversion Ubiquinol cytochrome c reductase, subunit QCR7
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0192 61569 61189 -127
(127 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR529c [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7 194 2e-50
SPCC737.02c [C] KOG3440 Ubiquinol cytochrome c reductase subunit... 122 1e-28
7293193 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7 76 8e-15
7301665 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7 74 2e-14
Hs5454152 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7 73 7e-14
CE21147 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7 55 2e-08
>YDR529c [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7
Length = 127
Score = 194 bits (493), Expect = 2e-50
Identities = 88/127 (69%), Positives = 112/127 (87%)
Query: 1 MPQTFTSIAKIGDYILRTPALAKVVVPIAHQFINLSGYRKMGLRFDDLIEEENELAQTAL 60
MPQ+FTSIA+IGDYIL++P L+K+ VP+A+QFINL+GY+K+GL+FDDLI EEN + QTAL
Sbjct: 1 MPQSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTAL 60
Query: 61 RRLPADESYARIYRIINAHQLSLSHHLLPKDKWTKPEDDIPYLTPYLLEAEAFVKEKEEL 120
RRLP DESYAR YRII AHQ L+HHLLP+++W K ++D+PYL PY+LEAEA KEK+EL
Sbjct: 61 RRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDEL 120
Query: 121 DNLEVAK 127
DN+EV+K
Sbjct: 121 DNIEVSK 127
>SPCC737.02c [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7
Length = 137
Score = 122 bits (305), Expect = 1e-28
Identities = 61/117 (52%), Positives = 82/117 (69%)
Query: 11 IGDYILRTPALAKVVVPIAHQFINLSGYRKMGLRFDDLIEEENELAQTALRRLPADESYA 70
+ YI ++P L K+++PI++ +++LSGYRK GLR+DDL+ EEN+ Q AL RLP ESY
Sbjct: 6 LAKYIQKSPFLTKLLLPISNAYVHLSGYRKYGLRYDDLMLEENDDTQKALSRLPKMESYD 65
Query: 71 RIYRIINAHQLSLSHHLLPKDKWTKPEDDIPYLTPYLLEAEAFVKEKEELDNLEVAK 127
R+YRI A QLS+ + +LPK +WTKPE+D YL P L E A KE+E D L V K
Sbjct: 66 RVYRIRRAMQLSIENKILPKSEWTKPEEDYHYLRPVLAEVIAERKEREAFDALIVKK 122
>7293193 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7
Length = 111
Score = 75.9 bits (185), Expect = 8e-15
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 34 NLSGYRKMGLRFDDLIEEENELAQTALRRLPADESYARIYRIINAHQLSLSHHLLPKDKW 93
NLSG+ + GL DD + E NE + A+RRLP R YRI+ A LS++ +LPK++W
Sbjct: 22 NLSGFNQYGLHRDDCLYE-NEDVKEAVRRLPRKLYDERNYRIMRALHLSMTKTILPKEQW 80
Query: 94 TKPEDDIPYLTPYLLEAEAFVKEKEELDNLE 124
TK E+D+ YL PYL E VKE+EE ++ E
Sbjct: 81 TKYEEDVKYLEPYLKEV---VKEREEREDWE 108
>7301665 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7
Length = 111
Score = 74.3 bits (181), Expect = 2e-14
Identities = 39/86 (45%), Positives = 57/86 (65%), Gaps = 1/86 (1%)
Query: 34 NLSGYRKMGLRFDDLIEEENELAQTALRRLPADESYARIYRIINAHQLSLSHHLLPKDKW 93
N+SG+ + GL DD + E ++A+ A+RRLP R YRI+ A LS++ +LPK++W
Sbjct: 22 NMSGFNQYGLYRDDCLYENEDVAE-AVRRLPRKLYDERNYRILRALHLSMTKTILPKEQW 80
Query: 94 TKPEDDIPYLTPYLLEAEAFVKEKEE 119
TK E+DI YL PYL E + +E+EE
Sbjct: 81 TKYEEDIKYLEPYLNEVQKEREEREE 106
>Hs5454152 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7
Length = 111
Score = 72.8 bits (177), Expect = 7e-14
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 32 FINLSGYRKMGLRFDDLIEEENELAQTALRRLPADESYARIYRIINAHQLSLSHHLLPKD 91
+ N +G+ K+GL DD I E+ ++ + A+RRLP + R++RI A L+L H +LPK+
Sbjct: 21 YYNAAGFNKLGLMRDDTIYEDEDVKE-AIRRLPENLYNDRMFRIKRALDLNLKHQILPKE 79
Query: 92 KWTKPEDDIPYLTPYLLEAEAFVKEKEE 119
+WTK E++ YL PYL E KE+EE
Sbjct: 80 QWTKYEEENFYLEPYLKEVIRERKEREE 107
>CE21147 [C] KOG3440 Ubiquinol cytochrome c reductase subunit QCR7
Length = 130
Score = 55.1 bits (131), Expect = 2e-08
Identities = 37/93 (39%), Positives = 47/93 (49%), Gaps = 3/93 (3%)
Query: 34 NLSGYRKMGLRFDDLIEEENELAQTALRRLPADESYA---RIYRIINAHQLSLSHHLLPK 90
NL G R+ GL+F D E ALRRL E + R R+ AH L+L LPK
Sbjct: 29 NLWGGREYGLQFHDTYFEPAPEVTEALRRLNLQEPHVFDQRKIRLSRAHTLALHGEKLPK 88
Query: 91 DKWTKPEDDIPYLTPYLLEAEAFVKEKEELDNL 123
+WT+ + + YL PYL E EA K + E L
Sbjct: 89 AEWTQWDQESWYLKPYLDEIEAEKKARAETSGL 121
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.137 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,766,189
Number of Sequences: 60738
Number of extensions: 315197
Number of successful extensions: 790
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 781
Number of HSP's gapped (non-prelim): 6
length of query: 127
length of database: 30,389,216
effective HSP length: 103
effective length of query: 24
effective length of database: 24,133,202
effective search space: 579196848
effective search space used: 579196848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)