ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0316 good O KOG0856 Posttranslational modification, protein turnover, chaperones Predicted pilin-like transcription factor
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0316 104954 104358 -199
(199 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YCL033c [O] KOG0856 Predicted pilin-like transcription factor 194 9e-50
At4g04800 [O] KOG0856 Predicted pilin-like transcription factor 149 3e-36
At4g04830 [O] KOG0856 Predicted pilin-like transcription factor 141 5e-34
SPBC216.04c [O] KOG0856 Predicted pilin-like transcription factor 140 9e-34
At4g21840 [O] KOG0856 Predicted pilin-like transcription factor 140 1e-33
At4g21830 [O] KOG0856 Predicted pilin-like transcription factor 140 1e-33
At4g04840 [O] KOG0856 Predicted pilin-like transcription factor 135 3e-32
At4g04810 [O] KOG0856 Predicted pilin-like transcription factor 130 1e-30
Hs22060707 [O] KOG0856 Predicted pilin-like transcription factor 124 8e-29
Hs20149600 [O] KOG0856 Predicted pilin-like transcription factor 110 2e-24
At1g53670 [O] KOG0856 Predicted pilin-like transcription factor 108 5e-24
7299377 [O] KOG0856 Predicted pilin-like transcription factor 105 4e-23
CE00184 [O] KOG0856 Predicted pilin-like transcription factor 95 7e-20
At4g21850 [O] KOG0856 Predicted pilin-like transcription factor 95 7e-20
Hs7706511 [O] KOG0856 Predicted pilin-like transcription factor 52 4e-07
>YCL033c [O] KOG0856 Predicted pilin-like transcription factor
Length = 168
Score = 194 bits (492), Expect = 9e-50
Identities = 86/140 (61%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 60 NLSKQFYRTMNSTGKWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIY 119
N SK+ N KWN +LT QL VLRDK TERPNTG YLH ++G+Y CANCD P+Y
Sbjct: 29 NKSKKMSDESNDV-KWNDALTPLQLMVLRDKATERPNTGAYLHTNESGVYHCANCDRPLY 87
Query: 120 KSETKFDSGCGWPAFYDAI-PGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKI 178
S+ KFD+ CGWPAFY+ + PG++T+ RD S R+EICC+RCGGH+GHVFEGEGW+++
Sbjct: 88 SSKAKFDARCGWPAFYEEVSPGAITYHRDNSLMPARVEICCARCGGHLGHVFEGEGWKQL 147
Query: 179 LNLPTDQRHCVNSCSLNFKE 198
LNLP D RHCVNS SLN K+
Sbjct: 148 LNLPKDTRHCVNSASLNLKK 167
>At4g04800 [O] KOG0856 Predicted pilin-like transcription factor
Length = 136
Score = 149 bits (375), Expect = 3e-36
Identities = 67/123 (54%), Positives = 87/123 (70%), Gaps = 6/123 (4%)
Query: 74 KWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPA 133
+W L+ EQ R+LR KGTE P TG Y++ + G+Y C C+ P+YKS TKF++GCGWPA
Sbjct: 13 EWRAILSPEQFRILRQKGTEYPGTGEYVNFDKEGVYGCVGCNAPLYKSTTKFNAGCGWPA 72
Query: 134 FYDAIPGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVNSCS 193
F++ IPG++T T D RIEI C+ CGGH+GHVF+GEG+ PTD+RHCVNS S
Sbjct: 73 FFEGIPGAITRTTDPDGR--RIEINCATCGGHLGHVFKGEGFA----TPTDERHCVNSVS 126
Query: 194 LNF 196
L F
Sbjct: 127 LKF 129
>At4g04830 [O] KOG0856 Predicted pilin-like transcription factor
Length = 139
Score = 141 bits (356), Expect = 5e-34
Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 6/123 (4%)
Query: 74 KWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPA 133
+W L+ EQ R+LR KGTE+P TG Y + GI+ C C P+YKS TKFDSGCGWPA
Sbjct: 14 EWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCGWPA 73
Query: 134 FYDAIPGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVNSCS 193
F++ +PG++ T D R EI C+ C GH+GHVF+GEG+ PTD+RHCVNS S
Sbjct: 74 FFEGLPGAINRTPDPDGR--RTEITCAACDGHLGHVFKGEGYGN----PTDERHCVNSVS 127
Query: 194 LNF 196
++F
Sbjct: 128 ISF 130
>SPBC216.04c [O] KOG0856 Predicted pilin-like transcription factor
Length = 138
Score = 140 bits (354), Expect = 9e-34
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 71 STGKWNPSLTSEQLRVLRDKGTERPNTGNYLHN-KQTGIYSCANCDLPIYKSETKFDSGC 129
S +W L E+ R++R KGTE P G + H + G++ CA C +YK+ TKF+S C
Sbjct: 8 SEDEWKKELGPEKYRIMRQKGTEHPGAGRFTHQFPKQGVFVCAACKELLYKASTKFESHC 67
Query: 130 GWPAFYDAIPGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCV 189
GWPAF+D +PG + D S+GM R+E C+ CGGH+GH+F+GEG+ PTD+RHC+
Sbjct: 68 GWPAFFDNLPGKVKRIEDNSYGMHRVEAVCANCGGHLGHIFKGEGYSN----PTDERHCI 123
Query: 190 NSCSLNF 196
NS SL F
Sbjct: 124 NSASLEF 130
>At4g21840 [O] KOG0856 Predicted pilin-like transcription factor
Length = 143
Score = 140 bits (352), Expect = 1e-33
Identities = 67/123 (54%), Positives = 84/123 (67%), Gaps = 6/123 (4%)
Query: 74 KWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPA 133
+W L+ EQ RVLR KGT++ G + + G YSCA C +YKS TKFDSGCGWPA
Sbjct: 20 EWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGWPA 79
Query: 134 FYDAIPGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVNSCS 193
F+DAIPG++ T + G R+EI C+ C GH+GHVF+GEG+ + PTDQRHCVNS S
Sbjct: 80 FFDAIPGAIKQTPEA--GGRRMEITCAVCDGHLGHVFKGEGY----STPTDQRHCVNSVS 133
Query: 194 LNF 196
L F
Sbjct: 134 LKF 136
>At4g21830 [O] KOG0856 Predicted pilin-like transcription factor
Length = 141
Score = 140 bits (352), Expect = 1e-33
Identities = 67/123 (54%), Positives = 84/123 (67%), Gaps = 6/123 (4%)
Query: 74 KWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPA 133
+W L+ EQ RVLR KGT++ G + + G YSCA C +YKS TKFDSGCGWPA
Sbjct: 18 EWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGWPA 77
Query: 134 FYDAIPGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVNSCS 193
F+DAIPG++ T + G R+EI C+ C GH+GHVF+GEG+ + PTDQRHCVNS S
Sbjct: 78 FFDAIPGAIKQTPEA--GGRRMEITCAVCDGHLGHVFKGEGY----STPTDQRHCVNSVS 131
Query: 194 LNF 196
L F
Sbjct: 132 LKF 134
>At4g04840 [O] KOG0856 Predicted pilin-like transcription factor
Length = 141
Score = 135 bits (341), Expect = 3e-32
Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 6/126 (4%)
Query: 71 STGKWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCG 130
S +W L+ EQ ++LR+K E+ +G Y+ + GIY C C P+YKS TKFDSGCG
Sbjct: 15 SNEEWRTVLSPEQFKILREKSIEKRGSGEYVKLFEEGIYCCVGCGNPVYKSTTKFDSGCG 74
Query: 131 WPAFYDAIPGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVN 190
WPAF+DAIPG++ R E +R EI C++C GH+GHV + EG+ PTD+RHCVN
Sbjct: 75 WPAFFDAIPGAI--NRTEERAGLRYEITCTKCDGHLGHVLKNEGFP----TPTDERHCVN 128
Query: 191 SCSLNF 196
S +L F
Sbjct: 129 SVALKF 134
>At4g04810 [O] KOG0856 Predicted pilin-like transcription factor
Length = 139
Score = 130 bits (327), Expect = 1e-30
Identities = 61/123 (49%), Positives = 80/123 (64%), Gaps = 6/123 (4%)
Query: 74 KWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPA 133
+W L+ EQ R+LR KGTE P T Y + GI+SC C P+YKS TKFD+GCGWPA
Sbjct: 14 EWRAVLSPEQFRILRQKGTETPGTEEYDKFFEEGIFSCIGCKTPLYKSTTKFDAGCGWPA 73
Query: 134 FYDAIPGSLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVNSCS 193
F++ +PG++ D R EI C+ C GH+GHV +GEG+ + PTD+R CVNS S
Sbjct: 74 FFEGLPGAINRAPDPDGR--RTEITCAVCDGHLGHVHKGEGY----STPTDERLCVNSVS 127
Query: 194 LNF 196
+NF
Sbjct: 128 INF 130
>Hs22060707 [O] KOG0856 Predicted pilin-like transcription factor
Length = 185
Score = 124 bits (311), Expect = 8e-29
Identities = 59/119 (49%), Positives = 81/119 (67%), Gaps = 7/119 (5%)
Query: 79 LTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPAFYDAI 138
LT Q V ++KGTE G Y H+K GIY C C P++KSETKFDSG GWP+F+D I
Sbjct: 47 LTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKFDSGSGWPSFHDVI 106
Query: 139 PG-SLTFTRDESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVNSCSLNF 196
++TFT D S+GM R+E CS+CG H+GH+F+ +G + PT +R+C+NS +L+F
Sbjct: 107 NSEAITFTDDFSYGMHRVETSCSQCGAHLGHIFD-DGPR-----PTGKRYCINSAALSF 159
>Hs20149600 [O] KOG0856 Predicted pilin-like transcription factor
Length = 201
Score = 110 bits (274), Expect = 2e-24
Identities = 57/133 (42%), Positives = 75/133 (55%), Gaps = 16/133 (12%)
Query: 74 KWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPA 133
+W LT EQ V R+KGTE P +G YL+NK+ G+Y C CD P++ SE K+ SG GWP+
Sbjct: 72 EWQKKLTPEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPLFSSEKKYCSGTGWPS 131
Query: 134 FYDAIPGS--------LTFTRDESFGMVRIEICCSRCGGHMGHVF-EGEGWQKILNLPTD 184
F +A S + D S G R E+ C +C H+GHVF +G G P
Sbjct: 132 FSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQCEAHLGHVFPDGPG-------PNG 184
Query: 185 QRHCVNSCSLNFK 197
QR C+NS +L FK
Sbjct: 185 QRFCINSVALKFK 197
>At1g53670 [O] KOG0856 Predicted pilin-like transcription factor
Length = 202
Score = 108 bits (270), Expect = 5e-24
Identities = 54/125 (43%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Query: 71 STGKWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCG 130
S +W LT EQ + R KGTER TG Y ++K G+Y+C CD P++ S TKFDSG G
Sbjct: 74 SENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLFDSSTKFDSGTG 133
Query: 131 WPAFYDAIPGSLTFTRDES-FGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCV 189
WP++Y I ++ D S M R E+ C+ C H+GHVF+ +G + PT +R+C+
Sbjct: 134 WPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFD-DGPR-----PTGKRYCL 187
Query: 190 NSCSL 194
NS +L
Sbjct: 188 NSAAL 192
>7299377 [O] KOG0856 Predicted pilin-like transcription factor
Length = 166
Score = 105 bits (262), Expect = 4e-23
Identities = 56/131 (42%), Positives = 76/131 (57%), Gaps = 19/131 (14%)
Query: 79 LTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPAFYDAI 138
LT Q +V ++ GTERP TG Y + + G+Y C C ++ SETK+DSGCGWPAF D +
Sbjct: 19 LTPVQYQVTQEAGTERPFTGCYNKHYEKGVYQCIVCHQDLFSSETKYDSGCGWPAFNDVL 78
Query: 139 -PGSLTFTRDESF------------GMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQ 185
G +T RD S +R E+ C+RC HMGHVFE +G + PT +
Sbjct: 79 DKGKVTLHRDASIPGGNILLLIAHPERIRTEVRCARCNAHMGHVFE-DGPK-----PTRK 132
Query: 186 RHCVNSCSLNF 196
R+C+NS S+ F
Sbjct: 133 RYCINSASIEF 143
>CE00184 [O] KOG0856 Predicted pilin-like transcription factor
Length = 152
Score = 94.7 bits (234), Expect = 7e-20
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 74 KWNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPA 133
+W L +E RV R+ GTE P+TG + + + G Y C C ++ S+ KF +GCGWPA
Sbjct: 29 EWKSVLPNEVYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88
Query: 134 FYDAIPGSLTFTR--DESFGMVRIEICCSRCGGHMGHVFEGEGWQKILNLPTDQRHCVNS 191
F +++ R D S GM R E+ C C H+GHVF +G ++ T +R+C+NS
Sbjct: 89 FSESVGQDANIVRIVDRSHGMHRTEVRCKTCDAHLGHVF-NDGPKE----TTGERYCINS 143
Query: 192 CSLNFKE 198
+ F++
Sbjct: 144 VCMAFEK 150
>At4g21850 [O] KOG0856 Predicted pilin-like transcription factor
Length = 124
Score = 94.7 bits (234), Expect = 7e-20
Identities = 42/71 (59%), Positives = 49/71 (68%)
Query: 75 WNPSLTSEQLRVLRDKGTERPNTGNYLHNKQTGIYSCANCDLPIYKSETKFDSGCGWPAF 134
W L+ EQ RVLR+KGTE G Y GIYSCA C P+YKS TKFDSGCGWP+F
Sbjct: 22 WRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLYKSTTKFDSGCGWPSF 81
Query: 135 YDAIPGSLTFT 145
+DAIPG++ T
Sbjct: 82 FDAIPGAIKQT 92
>Hs7706511 [O] KOG0856 Predicted pilin-like transcription factor
Length = 116
Score = 52.4 bits (124), Expect = 4e-07
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 105 QTGIYSCANCDLPIYKSETKFDSGCGWPAFYDAIPGSLTFTRDESFGMVRIEICCSRCGG 164
+ G+Y CA C ++ S +K+ WPAF + I R E +++ C +CG
Sbjct: 17 EPGVYVCAKCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPEHNRSEALKVSCGKCGN 76
Query: 165 HMGHVFEGEG 174
+GH F +G
Sbjct: 77 GLGHEFLNDG 86
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.323 0.137 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,036,053
Number of Sequences: 60738
Number of extensions: 482727
Number of successful extensions: 858
Number of sequences better than 1.0e-05: 15
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 817
Number of HSP's gapped (non-prelim): 16
length of query: 199
length of database: 30,389,216
effective HSP length: 101
effective length of query: 98
effective length of database: 24,254,678
effective search space: 2376958444
effective search space used: 2376958444
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)