ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0548 good K KOG1932 Transcription TATA binding protein associated factor
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0548 178544 182683 1380
(1380 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YCR042c [K] KOG1932 TATA binding protein associated factor 1212 0.0
SPAC3A12.05c [K] KOG1932 TATA binding protein associated factor 610 e-174
Hs4507347 [K] KOG1932 TATA binding protein associated factor 191 7e-48
7294859 [K] KOG1932 TATA binding protein associated factor 185 5e-46
At1g73960 [K] KOG1932 TATA binding protein associated factor 181 7e-45
CE19614 [K] KOG1932 TATA binding protein associated factor 131 8e-30
ECU09g0090 [K] KOG1932 TATA binding protein associated factor 89 5e-17
>YCR042c [K] KOG1932 TATA binding protein associated factor
Length = 1407
Score = 1212 bits (3136), Expect = 0.0
Identities = 641/1435 (44%), Positives = 907/1435 (62%), Gaps = 96/1435 (6%)
Query: 6 STPKTPGSAYPVVEQQFGPQFKVAHQRVQIDVDLSKNCIVGTTEMIIMPLTPNLEYIALD 65
+TP+ S + + F+VAH+++ +D+DL+ +CI G+ +II+PL NLEY+ D
Sbjct: 8 ATPRAIVSESSTLHEMKFRNFRVAHEKISLDIDLATHCITGSATIIIIPLIQNLEYVTFD 67
Query: 66 CKNMRIKDIIFENRRLDNFVHDDPYKKLSDSYLNNSEDDILYNCNGIEQSHLLRKKFSEF 125
CK M IKD++ ENRR D F+HDDP L + + ++LY+ N IEQSH LR KF+
Sbjct: 68 CKEMTIKDVLVENRRCDQFIHDDP---LQTNLNGLTSQNVLYSDNSIEQSHFLRSKFASL 124
Query: 126 NHNPEGSSKSQLLVKVPSSVKILPHDVNTLSAYLGTAAGTSGITPSLRNTPSTFPNDTIY 185
N PE SKSQL +K+PSS+KI D N LS Y + ITPS++ TP ++++
Sbjct: 125 NEYPETDSKSQLTIKIPSSIKISLEDANALSNY-------TPITPSIKTTPGF--QESVF 175
Query: 186 TPLTLRVDYELDHPHTGVCFDTI-SPEPHLWNAYTTNSELNSSVSHWLPCIDSLDEKCTW 244
TP+TL+++YE+ +P +G+ FDT+ + +P LWN YT+N E+ SS S+W+PC+D LDEK TW
Sbjct: 176 TPITLQIEYEIRNPKSGIKFDTVYADKPWLWNVYTSNGEICSSASYWVPCVDLLDEKSTW 235
Query: 245 DLEISVPKRVRDIGTTKVVGARNLRKRTAR---------------------DRRSNLNAN 283
+LE SVP+ V++IGT+K++G + D+ SNL +
Sbjct: 236 ELEFSVPRLVKNIGTSKLIGQNGEESEKEKEDTPEHDEEEEGKPARVIKDEDKDSNLKND 295
Query: 284 DEHMKXXXXXXXXXXXXXXXXXXXXGTIQNEDLNR-----------EIVVVCSEMATRKV 332
+E + E+ R +++V CSE + K
Sbjct: 296 EEGKNSKSKDAQDNDEEEEEGESDEEEEEGEEERRNIEESNNPSLRDVIVCCSEYSNIKE 355
Query: 333 TAHPMDMAKKTVSFQIFTPVAPHHIGWAIGAFQTIELPSIL--QADEDEEMDEFKIPQQE 390
HP+D+ KK FQI PVAPHHIGWAIGAF + LP I D ++E++E K+ +
Sbjct: 356 LPHPIDLTKKKCIFQIINPVAPHHIGWAIGAFNSWSLPLISPPSVDAEDEVEEDKLRENV 415
Query: 391 QVLADEPRDE------IPIFVYTLPTVDLNEKTILNSTLVCQEIMDFYSKEFGSYPFTSY 444
++ D+ IPI ++TLPT + +E T++NST+VCQ+I+DFYSKEFGSYPFT Y
Sbjct: 416 VDNVNDTMDDDIGSDIIPIQIFTLPTQETDELTVINSTVVCQKIIDFYSKEFGSYPFTCY 475
Query: 445 SLLFLPTLTTDLMDFTSATFYNSRMLYPPEIIDLIYPTTNTLAWGLANQWSGVNITPLEL 504
S++FLPT + MDF + N+R+LYP E+ID + TTN LAW LANQWS VNITPL++
Sbjct: 476 SMVFLPTAPSKHMDFAALGICNTRLLYPLEVIDKAFSTTNELAWALANQWSCVNITPLDM 535
Query: 505 NDLWCVVGMAGYMVLQLIRKLMGVNEYKFRIKMASEAIVEQDWEKQPIGTTFDSASLPIS 564
ND WC +G+AGYMV Q+ +KLMG N YK+++K SEAIVEQD+EK PIG+TF +S PIS
Sbjct: 536 NDYWCCLGIAGYMVFQVTKKLMGNNTYKYQLKRNSEAIVEQDFEKPPIGSTFTGSSRPIS 595
Query: 565 TLSKEINFIKLKAPMVLFILDRRMTKTERSFGMSRVLPKIYLQAMSGELTNNSLSSTHFQ 624
SK+++FI+LKAPM+L ILDRRMTKTERSFGMSRVLPKI+LQAMSG+L NNSL+S+HFQ
Sbjct: 596 WSSKDLSFIQLKAPMILHILDRRMTKTERSFGMSRVLPKIFLQAMSGDLPNNSLTSSHFQ 655
Query: 625 RVCERVNKNRLETFFKQWVYGSGVPIFRITQRFNKKRMAVEMGIRQVQMQELGLGKIVGK 684
VCERVNK++LE FF +WVYGSGVPI R+TQRFN+KRM +E+GIRQVQ +ELG K+VG+
Sbjct: 656 HVCERVNKSKLENFFNEWVYGSGVPILRVTQRFNRKRMVIELGIRQVQDEELGHEKVVGE 715
Query: 685 ENFNSSAMEYLQDQDKSPTQVFTGSMTIRIHEADGTPYEHIVELKDVFTKLDVQXXXXXX 744
E F SA+++L+ D + T+ FTGSMTIRIHE DGTPYEHIVE+KD FTK+D+Q
Sbjct: 716 EGFFKSALDHLEHPDLNRTECFTGSMTIRIHEHDGTPYEHIVEIKDTFTKIDIQ------ 769
Query: 745 XXXXXXXXXXXXXEAKXXXXXXXXXXXNANED---IVLINCMGDVLVSKDDCNKWNLTDP 801
+ N NE+ +V +NC+G+V +S ++C++++LT+
Sbjct: 770 -----YNTKYRRLRKRGGGANDENGVENNNEEKPIVVDVNCLGNVYMSPEECSRFSLTEF 824
Query: 802 MTTSEGDDLQQQNEAFEWIRIDSDFEWISKVHINQPDYMFASQLQQDRDVEAQVESVRFF 861
TSE ++L +QNEAFEWIRIDSD EWI ++HINQPDYMF+SQL+QD D+EAQ+E++R++
Sbjct: 825 NRTSESNELLKQNEAFEWIRIDSDLEWICQMHINQPDYMFSSQLRQDGDIEAQLEAIRYY 884
Query: 862 EDVILNGTSNSLIYSSILTRTAMDPKYFHGVRLAACRALSKFTIKAEEQQEFKGGPRHLV 921
EDV++NG SL+YSSIL RTA+D +YF G+RLAAC ALSK+ +F GG +HL+
Sbjct: 885 EDVVVNGGVKSLVYSSILFRTAIDERYFFGIRLAACEALSKYVY----DPDFTGGVKHLI 940
Query: 922 QIFRELFCYEDSNIPKNNDFSDYPKYFLQKAIPKLLSSVKNDEGVCPAFVKEFLLDVVRY 981
QIF+ LFC EDSNIPK+N+F + YFLQ IPK L+ VKN+ G CP VK+FLLD++ Y
Sbjct: 941 QIFQILFCLEDSNIPKSNNFENPKLYFLQCNIPKYLAKVKNENGKCPKLVKQFLLDILVY 1000
Query: 982 NDNTDNIYSDTFYITELLESLVDCSISDINDTKYIDEVMNEIQRFYNLDQWMSSYQFLTT 1041
N+N +N YSD Y+ L+E++V ++++ D Y+++V ++ R+ NL W+SSY+ L
Sbjct: 1001 NENGENKYSDDAYVRSLIENVVKVALNEYKDKAYMEKVKTQLLRYENLVNWLSSYESLIK 1060
Query: 1042 KTIQKQRLKLAVHGLYHYEDYNELLSSTM-LDQPTTDHPVICHAREGLQDIALQALKILL 1100
TI + KL G Y + + ++ T+ L D +RE Q+ L LKI+L
Sbjct: 1061 TTIMYAKYKLHKVGAYDFTELTGMIMHTLTLGINNGD-----ISRESFQNEFLMVLKIML 1115
Query: 1101 VIGGIKNKEVLKYYFETLCFHPDVYIRTKLVDTFAGAIDLISSKNSISEIEDDIDYMMNE 1160
+ GG+KNK+ L + E LCFH D YIR K VD + ++L+ S+ I DDI +
Sbjct: 1116 LEGGLKNKDALVLFTEILCFHEDSYIRDKSVDVLSECVNLVVMDGSLDTISDDIKSSVQS 1175
Query: 1161 ICPTDPTTVASIVVED---------FTKEVAHRREKQLRSSINGMITLTRQKFKDYEPLK 1211
+ V +I ED + ++ + EK R +I+G+I + R FK Y PLK
Sbjct: 1176 V----HNEVKNIKSEDDIELFLSGHYVDDMKIKIEKIGRQNISGLIQICRDMFKGYSPLK 1231
Query: 1212 MIMWDVLHSPLINVYQRKRLFDIANVIYQLYDAYNVILPVPRDKKLVCKNIGNN----TV 1267
+++WDVL+ P++++YQRK++ D+ V+Y L +++ V L PR+++LV K N +
Sbjct: 1232 ILLWDVLNLPVLSLYQRKQIHDLVRVMYTLINSFVVRLETPRERRLVAKMNSNEEGKLDI 1291
Query: 1268 VIKREGILKVHLAPLKPAIVE-PKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 1326
VIKRE ILKVH+ + VE PK
Sbjct: 1292 VIKRESILKVHIKKEVTSTVEAPKKANKIKISLKGDKPVRKVEKQIVKPKVTSKQRKVKS 1351
Query: 1327 TVTKVGTLPIRFLKISTKTN-SVHISSLPHNPNVSILKSNRRTLSIKLKVPANKK 1380
V ++G+LP+RF+KI + VH+SS+P++ V I K R+ +K++ + K
Sbjct: 1352 HVNRMGSLPLRFVKIQQQPRVMVHLSSVPYSQFVQITKVTSRSFMVKIRTKNDAK 1406
>SPAC3A12.05c [K] KOG1932 TATA binding protein associated factor
Length = 1174
Score = 610 bits (1572), Expect = e-174
Identities = 407/1273 (31%), Positives = 646/1273 (49%), Gaps = 167/1273 (13%)
Query: 24 PQFKVAHQRVQIDVDLSKNCIVGTTEMIIMPLTPNLEYIALDCKNMRIKDIIFENRRLDN 83
P +HQ+V ID+D + I+G T++ + P+ NL+ I LDC I + + N L
Sbjct: 8 PARGTSHQKVAIDIDFASQTIIGRTDITVNPIDSNLQKIVLDCYQAEIHSV-YVNGDLTK 66
Query: 84 FVHDDPYKKLSDSYLNNSEDDILYNCNGIEQSHLLRKKFSEFNHNPEGSSKSQLLVKVPS 143
F + D KKL N++ + Q H L ++
Sbjct: 67 FSYSDALKKLRIDEPNST----------VNQHHQLNLQY--------------------- 95
Query: 144 SVKILPHDVNTLSAYLGTAAGTSGITPSLRNTPSTFPNDTIYTPLTLRVDYELDHPHTGV 203
+ L +D+ ++ +L S P D + PL + +D+ + P G+
Sbjct: 96 --EALMNDLGGINIFL-----------------SKPPGDEL-RPLIVSIDFSVHQPIFGI 135
Query: 204 CFDTISPEPHLW-NAYTTNSELNSSVSHWLPCIDSLDEKCTWDLEISVPKRVRDIGTTKV 262
F I P H + + +T NS + S WLPC+D + E+ TW+ EI++PK + +
Sbjct: 136 TFVGIDPVDHRYPHVFTNNSIIPYSTCSWLPCVDGIWERSTWEFEITLPKTLSSL----- 190
Query: 263 VGARNLRKRTARDRRSNLNANDEHMKXXXXXXXXXXXXXXXXXXXXGTIQNE-DL--NRE 319
+ K D + N D H + NE DL + +
Sbjct: 191 ---MHREKTQPSDLNNGANGVDGHDDNYENNRFDHQF----------NLSNEPDLLEDHD 237
Query: 320 IVVVCSEMATRKVTAHPMDMAKKTVSFQIFTPVAPHHIGWAIGAFQTIELPSILQADEDE 379
I V+C +VT HP DM KKTV F + TPVAP++I +A G F+ I L + ++D+
Sbjct: 238 IEVICCGDLLDQVT-HPKDMRKKTVYFSVTTPVAPNYIAFAAGPFKHINLTDFREPEDDD 296
Query: 380 EMDEFKIPQQEQVLADEPRDEIPIFVYTLPTVDLNEKTILNSTLVCQEIMDFYSKEFGSY 439
M I I Y LP + + N+ + + MDF+ +E+GSY
Sbjct: 297 AMGS---------------SAIDITGYYLPKY---AEEVENTCVFLYKAMDFFVREYGSY 338
Query: 440 PFTSYSLLFLPTLTTDLMDFTSATFYNSRMLYPPEIIDLIYPTTNTLAWGLANQWSGVNI 499
PF S+ L F+ ++ S ++ +LYP + +D IY +T TL W LA+QW GV +
Sbjct: 339 PFNSFKLCFVDETNFPIISTPSLVISSNSILYPKDSLDQIYDSTKTLTWALASQWIGVYL 398
Query: 500 TPLELNDLWCVVGMAGYMVLQLIRKLMGVNEYKFRIKMASEAIVEQDWEKQPIGTTFDSA 559
P +DLW + G++ Y+ ++KLMG N+Y+FR+K ++E D K PI +
Sbjct: 399 IPKAWSDLWLIYGLSYYICGLFLKKLMGNNDYRFRLKKQVYRLLELDIGKPPISQR--NI 456
Query: 560 SLPISTLSKEINFIKLKAPMVLFILDRRMTKTERSFGMSRVLPKIYLQAMSGELTNNSLS 619
++PI ++FI LK+P+V+ IL+RR+TKT S GMSRV+PK+ LQ MSG++ N LS
Sbjct: 457 NIPIDP--NTLDFIALKSPLVIHILERRLTKTGGSLGMSRVIPKLLLQVMSGDMLNGCLS 514
Query: 620 STHFQRVCERVNKNRLETFFKQWVYGSGVPIFRITQRFNKKRMAVEMGIRQVQMQELGLG 679
++HF + CE+ + RL+ F +QW+YG G PIFR+ QRFN+K+M +EMGI QVQ +E
Sbjct: 515 TSHFLKTCEKASHMRLDVFAQQWIYGYGYPIFRVVQRFNRKKMIIEMGIDQVQTKEAPRA 574
Query: 680 KIVGKENFNSSAMEYLQDQDKSPT--QVFTGSMTIRIHEADGTPYEHIVELKDVFTKLDV 737
+ K NF S A+ +L ++ PT VF+G MTIRIHEADGTPYEH+VELKD FTKLD+
Sbjct: 575 PMSDK-NFLSDAIRHLNNES-IPTGLPVFSGPMTIRIHEADGTPYEHVVELKDSFTKLDI 632
Query: 738 QXXXXXXXXXXXXXXXXXXXEAKXXXXXXXXXXXNANEDIVLINCMGDVLVSKDDCNKWN 797
Q + N ++ +I +GDVL S +D +W+
Sbjct: 633 QYNTKYKRISRNRSTKNVKRDG----------DHNGDDSDYVIRSLGDVLQSDEDIERWH 682
Query: 798 LTDPMTTSEGDDLQQQNEAFEWIRIDSDFEWISKVHINQPDYMFASQLQQDRDVEAQVES 857
L D T E +D EAFEWIR+D+DFEWI + + QP++M+ SQLQQDRDV AQ+E+
Sbjct: 683 LYD--YTKEEED-TMATEAFEWIRVDADFEWICDLRVRQPEHMYVSQLQQDRDVVAQLET 739
Query: 858 VRFFEDVILNGTSNSLIYSSILTRTAMDPKYFHGVRLAACRALSKFTIKAEEQQEFKGGP 917
+R F + S S++L RT +D +Y++G+R A RAL++ I + G
Sbjct: 740 IRHFTS---ESFTVSQQVSTVLLRTLLDNRYYYGIRQEAARALARCAIPELDWV----GY 792
Query: 918 RHLVQIFRELFCYEDSNIPKNNDFSDYPKYFLQKAIPKLLSSVKNDEGVCPAFVKEFLLD 977
HL + E FC++DS IPK+NDFS+ +Y+++ A+ + ++++ +GV P+ VK+ LLD
Sbjct: 793 YHLRMAYLEKFCFKDSTIPKSNDFSNITEYYVKCAMLESFPNIRDRKGVTPSSVKKLLLD 852
Query: 978 VVRYNDNTDNIYSDTFYITELLESLVD----------CSISDINDTKYIDEVMNEIQRFY 1027
++ YNDN +N +SD ++I L++SLV+ + SD +++++V+NEI R+
Sbjct: 853 LLCYNDNANNEFSDAYFICLLIDSLVEGLIPRGETVQYAFSDPEHMEFVNQVINEIDRYM 912
Query: 1028 NLDQWMSSYQFLTTKTIQKQRLKLAVHGLYHYE-DYNELLSSTMLDQPTTDHPVICHARE 1086
+D M S++ + T K +L+LA +H E ELL T +E
Sbjct: 913 RIDACMPSFKNIITCKSLKAKLRLA--QTFHLEFGPKELLPYT---------------QE 955
Query: 1087 G-LQDIALQALKILLVIGGIKNKEVLKYYFETLCFHPDVYIRTKLVDTFAGAIDLISSKN 1145
G + A ++L G +K ++KY F YI T + + ++
Sbjct: 956 GNYVLVRCIAFNLMLQAGALKYTPLIKYIF---------YILT-------NDLSPVVRRS 999
Query: 1146 SISEIEDDIDYMMNEICPTDPTTVASIVVEDFTKEVAHRREKQLRSSINGMITLTRQKFK 1205
+ ++D + + +D + IV ED TK V R + R+SI+G I R
Sbjct: 1000 LLYSVQDGLGALARGGTKSDVASEDLIVEEDITKAVEKRIDITSRASISGAIEALRNDLG 1059
Query: 1206 DYEPLKMIMWDVLHSPLINVYQRKRLFDIANVIYQLYDAYNVILPVPR-DKKLVCKNIGN 1264
+W+ +++P ++ ++ L I V+Y+ + V L +P +L ++G
Sbjct: 1060 QNHDFATEIWNAINNPKSDLLTKRNLLMICRVLYKAKSSLLVTLKIPSLIPRLRAIHLGK 1119
Query: 1265 NTVVIKREGILKV 1277
+VIK+ + ++
Sbjct: 1120 GKIVIKKAPLKQI 1132
>Hs4507347 [K] KOG1932 TATA binding protein associated factor
Length = 1199
Score = 191 bits (485), Expect = 7e-48
Identities = 182/742 (24%), Positives = 319/742 (42%), Gaps = 146/742 (19%)
Query: 333 TAHPMDMAKKTVSFQIFTPVAPHHIGWAIGAFQTIELPSILQADEDEEMDEFKIPQQEQV 392
T + DM KKT + + P A +I AIG F+ + P + E+ F +PQ
Sbjct: 223 TVYTHDMRKKTFHYMLTIPTAASNISLAIGPFEILVDPYM------HEVTHFCLPQL--- 273
Query: 393 LADEPRDEIPIFVYTLPTVDLNEKTILNSTLVCQEIMDFYSKEFGS-YPFTSYSLLFLPT 451
+P+ +T T E+ +FY + YP++ + +F+
Sbjct: 274 --------LPLLKHT--------------TSYLHEVFEFYEEILTCRYPYSCFKTVFIDE 311
Query: 452 LTTDLMDFTSATFYNSRMLYPPEIIDLIYPTTNTLAWGLANQWSGVNITPLELNDLWCVV 511
++ + S + +++ +L+ IID T LA LA Q+ G I+ + +D W +
Sbjct: 312 AYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFISRMSWSDEWVLK 371
Query: 512 GMAGYMVLQLIRKLMGVNEYKFRIKMASEAIVEQDWEK-----QPIGTTFDSASLPIS-- 564
G++GY+ ++K GVNEY+ IK + IV + + PI P S
Sbjct: 372 GISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGGGKEKDNPASHL 431
Query: 565 --------TLSKEI-NFIKLKAPMVLFILDRRMTKTERSFGMSRVLPKIYLQAMSGELTN 615
TLS E + KA +V+ +++ R++ E + L + A S + +
Sbjct: 432 HFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISM-EFMLQVFNKLLSLASTASSQKFQS 490
Query: 616 NS-----LSSTHFQRVCERVNKNRLETFFKQWVYGSGVPIFRITQRFNKKRMAVEMGIRQ 670
+ +S++ F + V+ ++ KQWV SGV F + FN+KR +E+ I+Q
Sbjct: 491 HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ 550
Query: 671 VQMQELGLGKIVGKENFNSSAMEYLQDQDKSPTQVFTGSMTIRIHEADGTPYEHIVELKD 730
D TQ + G + + + E DG+ + H +++++
Sbjct: 551 --------------------------DYTSPGTQKYVGPLKVTVQELDGS-FNHTLQIEE 583
Query: 731 VFTKLDVQXXXXXXXXXXXXXXXXXXXEAKXXXXXXXXXXXNANEDIVLINCMGDVLVSK 790
K D+ N + I L+N G+ +
Sbjct: 584 NSLKHDIPCHSKSRR--------------------------NKKKKIPLMN--GEEVDM- 614
Query: 791 DDCNKWNLTDPMTTSEGDDLQQQNEAFEWIRIDSDFEWISKVHINQPDYMFASQLQQDRD 850
D + + P+ WIRID D + KV Q D+M+ QL+ +RD
Sbjct: 615 -DLSAMDADSPLL---------------WIRIDPDMSVLRKVEFEQADFMWQYQLRYERD 658
Query: 851 VEAQVESVRFFEDVILNGTSNSLIYSSILTRTAMDPKYFHGVRLAACRALSKFTIKAEEQ 910
V AQ ES+ E ++ L + IL + + F+ VR++AC L+K A
Sbjct: 659 VVAQQESILALEK--FPTPASRLALTDILEQE----QCFYRVRMSACFCLAKI---ANSM 709
Query: 911 QEFKGGPRHLVQIFRELFCYEDS-NIPKNNDFSDYPKYFLQKAIPKLLSSVKNDEGVCPA 969
GP + +F +FC + NI K N+F + YFLQK +P ++ +++ +CP
Sbjct: 710 VSTWTGPPAMKSLFTRMFCCKSCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPK 769
Query: 970 FVKEFLLDVVRYNDNTDNIYSDTFYITELLESL---VDCSISDINDTKYIDE-------V 1019
V F+LD+++YNDN N +SD +Y E++++L V ++S N+ + +D +
Sbjct: 770 EVLTFILDLIKYNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLI 829
Query: 1020 MNEIQRFYNLDQWMSSYQFLTT 1041
+ EI RF N+++ + SY+ T
Sbjct: 830 LEEITRFLNMEKLLPSYRHTIT 851
>7294859 [K] KOG1932 TATA binding protein associated factor
Length = 1219
Score = 185 bits (469), Expect = 5e-46
Identities = 187/786 (23%), Positives = 324/786 (40%), Gaps = 174/786 (22%)
Query: 322 VVCSEMATRKVTAHPMDMAKKTVSFQIFTPVAPHHIGWAIGAFQTIELPSILQADEDEEM 381
V C E+ +T D+ KKT + + TPV +I A+G F+ P + E+
Sbjct: 205 VSCGELLEVIMTP---DLRKKTFHYSVSTPVCAPNIALAVGQFEIYVDPHM------HEV 255
Query: 382 DEFKIPQQEQVLADEPRDEIPIFVYTLPTVDLNEKTILNSTLVCQEIMDFYSKEFGS-YP 440
F +P +L N+ E +FY + + YP
Sbjct: 256 THFCLPGLLPLLK-------------------------NTVRYLHEAFEFYEETLSTRYP 290
Query: 441 FTSYSLLFLPTLTTDLMDFTSATFYNSRMLYPPEIIDLIYPTTNTLAWGLANQWSGVNIT 500
F+ Y +F+ L TD+ + + + + +L+ IID Y + ++ +A Q+ G IT
Sbjct: 291 FSCYKQVFVDELDTDISAYATMSIASVNLLHSIAIIDQTYISRTFMSRAVAEQFFGCFIT 350
Query: 501 PLELNDLWCVVGMAGYMVLQLIRKLMGVNEYKFRIKMASEAIVEQDWEKQ---------- 550
+D W G+A Y+ RK G NEY+ ++ +V +E+Q
Sbjct: 351 SHHWSDTWLAKGIAEYLCGLYSRKCFGNNEYRAWVQSELARVVR--YEEQYGGIILDCSQ 408
Query: 551 -----PIGTTFDSAS----------LPISTLS----KEINFIKLKAPMVLFILDRRMTKT 591
P+ T SA+ PI +L K + ++ KA V+ +L+ R+ +
Sbjct: 409 PPAPLPVSGTNQSAASSKQQEIVHYFPIKSLHTVSPKYVEAMRRKAHFVIRMLENRIGQE 468
Query: 592 ERSFGMSRVLPKIYLQAMSGELTNNS--------LSSTHFQRVCERVNKNRLETFFKQWV 643
+ +V K A S T +S+ F + V + F QWV
Sbjct: 469 L----LIQVFNKQLALASSAATTKIGAGLWSQLLISTNIFIKAIFTVTGKDMSVFMDQWV 524
Query: 644 YGSGVPIFRITQRFNKKRMAVEMGIRQVQMQELGLGKIVGKENFNSSAMEYLQDQDKSPT 703
G F +T FN+KR +E+ IRQ + + G+ K
Sbjct: 525 RTGGHAKFSLTSVFNRKRNTIELEIRQDYVNQRGIRK----------------------- 561
Query: 704 QVFTGSMTIRIHEADGTPYEHIVELKDVFTKLDVQXXXXXXXXXXXXXXXXXXXEAKXXX 763
+ G + +++ E DGT ++H ++++ K D+
Sbjct: 562 --YNGPLMVQLQELDGT-FKHTLQIESTLVKSDI-------------------------- 592
Query: 764 XXXXXXXXNANEDIVLINCMGDVLVSKDDCNKWNLTDPMTTSEGDDLQQQNEAFEWIRID 823
N + I L C G+ + M S DD WIR+D
Sbjct: 593 TCHSKSRRNKKKKIPL--CTGEEV-------------DMDLSAMDD-----SPVLWIRLD 632
Query: 824 SDFEWISKVHINQPDYMFASQLQQDRDVEAQVESVRFFEDVILNGTSNSLIYSSILTRTA 883
+ + + I QPD+ + QL+ +RDV AQ ++++ + N T +L T T
Sbjct: 633 PEMILLRDLIIEQPDFQWQYQLRHERDVTAQFQAIQALQKYPTNATRLAL------TDTI 686
Query: 884 MDPKYFHGVRLAACRALSKFTIKAEEQQEFKGGPRHLVQIFRELF-CYEDSNIPKNNDFS 942
+ F+ VR A +L+K A + GP ++ IFR+ F + +I K N+FS
Sbjct: 687 ESERCFYQVRCEAAHSLTKV---ANQMVASWSGPPAMLNIFRKFFGSFSAPHIIKLNNFS 743
Query: 943 DYPKYFLQKAIPKLLSSVKNDEGVCPAFVKEFLLDVVRYNDNTDNIYSDTFYITELLESL 1002
++ YFLQKAIP ++ ++ G+CP V FL D+ +YN+N+ N Y+D +Y L+E+L
Sbjct: 744 NFQLYFLQKAIPVAMAGLRTSHGICPPEVMRFLFDLFKYNENSRNHYTDAYYRAALVEAL 803
Query: 1003 VD-----CSISDINDTKYIDE--------VMNEIQRFYNLDQWMSSYQFLTTKTIQKQRL 1049
+ S++ I+ T+ + V++E+ R N+++ + SY+++ + + K
Sbjct: 804 GETLTPVVSVA-IHGTQITTDSLSTDAKLVLDEVTRLLNMEKHLPSYKYMVSVSCLKVIR 862
Query: 1050 KLAVHG 1055
KL G
Sbjct: 863 KLQKFG 868
>At1g73960 [K] KOG1932 TATA binding protein associated factor
Length = 1273
Score = 181 bits (459), Expect = 7e-45
Identities = 170/661 (25%), Positives = 294/661 (43%), Gaps = 125/661 (18%)
Query: 438 SYPFTSYSLLFLPT--LTTDLMDFTSATFYNSRMLYPPEIIDLIYPTTNTLAWGLANQWS 495
++PF Y +FLP + T S + ++S +LY +ID T LA LA QW
Sbjct: 257 NFPFGFYKQVFLPPEMVVTSSTSGASLSIFSSHILYDERVIDQTIDTRIKLASALAKQWF 316
Query: 496 GVNITPLELNDLWCVVGMAGYMVLQLIRKLMGVNEYKFRIKMASEAIVEQDWEKQPIGTT 555
GV ITP ND W + G+AG++ I++ +G NE ++R A+ A+ + D
Sbjct: 317 GVYITPESPNDDWLLDGLAGFLTDMFIKQFLGNNEARYRRYKANCAVCKAD--------- 367
Query: 556 FDSASLPISTLSKEINFIKLKAPMVLFILDRRMTKTERSFGMSR----VLPKIYLQAMSG 611
DS ++ +S+ D T + G R +L KI +A
Sbjct: 368 -DSGAMCLSSSPS--------------CRDLFGTHSIGMHGKIRSWKSILQKIISRAKDP 412
Query: 612 ELTNNSLSSTHFQRVCERV-NKNR--LETFFKQWVYGSGVPIFRITQRFNKKRMAVEMG- 667
+ SLS+ F++ ++ N R L+ FF++WV G P+ RI +NK++ VEM
Sbjct: 413 SNSIRSLSTKEFRQFANKIGNLERPFLKEFFQRWVASYGCPVLRIGLSYNKRKNNVEMAA 472
Query: 668 IRQVQMQELGLGKIVGKENFNSSAMEYLQDQDKSPTQVFTGSMTIRIHEADG-TPYEHIV 726
+R+ ++G + + S +D D + G M+IR++E DG + + +
Sbjct: 473 LRECTAALDARLSVIGATSDSES-----RDVDAG----WPGIMSIRVYELDGMSDHPKLP 523
Query: 727 ELKDVFTKLDVQXXXXXXXXXXXXXXXXXXXEAKXXXXXXXXXXXNANEDIVLINCMGDV 786
D + L++ AK + ED V D
Sbjct: 524 MAGDRWQLLELPCHSKLA--------------AKRYQKPKKGGKPDGAEDNV------DA 563
Query: 787 LVSKDDCNKWNLTDPMTTSEGDDLQQQNEAFEWIRIDSDFEWISKVHINQPDYMFASQLQ 846
+ + NK ++ P+ WI+ D + E+I+++H++QP M+ +QL+
Sbjct: 564 IAPLE--NKTSIESPLA---------------WIKADPEMEYIAEIHLHQPLQMWVNQLE 606
Query: 847 QDRDVEAQVESVRFFEDVILNGTSNSLIYSSILTRTAMDPKYFHGVRLAACRALSKFTIK 906
+D DV AQ +++ E + + S ++LT D K F +R+AA AL+K
Sbjct: 607 KDGDVVAQAQAIASLEALKQHSFSIVNALKNVLT----DSKVFWRIRIAAAFALAK---T 659
Query: 907 AEEQQEFKGGPRHLVQIFRELFCYEDSNIPKNNDFSDYPKYFLQK--------------- 951
A E+ ++ G +HL++ ++ + +PK NDF D+P+YF+ +
Sbjct: 660 ASEESDW-AGLQHLIKFYKSRRFDAEIGLPKPNDFRDFPEYFVLEVGNELDIVSRIDLRS 718
Query: 952 ----------------AIPKLLSSVKNDEGVCPAFVKEFLLDVVRYNDNTDNIYSDTFYI 995
AIP ++ V+ EG P EF+L +++YNDN+ N YSD F++
Sbjct: 719 CFPLGVSIVIPLPETMAIPHAIAIVRGAEGKSPREAVEFILQLLKYNDNSGNSYSDVFWL 778
Query: 996 TELLESLVDCSISDINDTKYIDEVMNEIQRFYNLDQWMSSYQFLTT----KTIQKQRLKL 1051
L++S+ D + T ++ ++ I R D+ M SY + T +T+ + LKL
Sbjct: 779 AVLVQSVGDLEFCQQSLT-FLAPLLKRIDRLLQFDRLMPSYNGILTISCIRTLAQTALKL 837
Query: 1052 A 1052
+
Sbjct: 838 S 838
>CE19614 [K] KOG1932 TATA binding protein associated factor
Length = 1086
Score = 131 bits (329), Expect = 8e-30
Identities = 144/680 (21%), Positives = 282/680 (41%), Gaps = 136/680 (20%)
Query: 346 FQIFTPVAPHHIGWAIGAFQTIELPSILQADEDEEMDEFKIPQQEQVLADEPRDEIP-IF 404
F P + +IGWAIG F+ EP E P I+
Sbjct: 277 FHQTVPTSACNIGWAIGRFKL-----------------------------EPHPESPTIY 307
Query: 405 VYTLPTVDLNEKTILNSTLVCQEIMDFYSKEFGS-YPFTSYSLLFLPTLTTDLMDFTSAT 463
++LP + E + ++T+ ++++F ++ +P+ + ++F+ T ++ ++S
Sbjct: 308 TFSLPGL---EPFVNHTTMYLDKMVEFLEEKLSCRFPYPTLKVVFVDQCTEEIQVYSSLL 364
Query: 464 FYNSRMLYPPEIIDLIYPTTNTLAWGLANQWSGVNITPLELNDLWCVVGMAGYMVLQLIR 523
+ MLY +IID++ L + +A Q+ G I+P + W V +A ++ +
Sbjct: 365 IVPTAMLYHKKIIDVVQEARQKLIFSIALQFFGCLISPAQWWHWWIPVSIARFLTSLYVE 424
Query: 524 KLMGVNEYKFRIKMASEAI--VEQDWEKQPIGTTFDSASLPISTLSKE---INFIKLKAP 578
+G E ++++K A + + E W K + + LP+ + + + ++A
Sbjct: 425 TKLGTAEARWQLKRAMDDVCDYEHQWGKIVLSPPEPTKKLPLHVDPRHEYTASPLYVEAM 484
Query: 579 MVLFILDRRMTKTERSFGMS---RVLPKIYLQA--MSGELT-----NNSLSSTH-FQRVC 627
+ L RM +R G+ RVL ++ MS + T + L++T F R
Sbjct: 485 LKKGFLTMRM--LQRRIGLEPFMRVLHRVLTVGLDMSEKKTTPAAWRHLLTTTESFFRSV 542
Query: 628 ERVNKNRLETFFKQWVYGSGVPIFRITQRFNKKRMAVEMGIRQVQMQELGLGKIVGKENF 687
V + +F Q+V G F + FN+KR VE+ I+Q
Sbjct: 543 ISVTGKEIPSFLSQFVRTGGHAAFAVKFDFNRKRNIVEIEIKQ----------------- 585
Query: 688 NSSAMEYLQDQDKSPTQVFTGSMTIRIHEADGTPYEHIVELKDVFTKLDVQXXXXXXXXX 747
D + + +TG +++ + E DG + H +++ + ++
Sbjct: 586 --------DDTEGNGRTQYTGPLSVVVQEVDGA-FTHTIQIDGAVSHAEISCHSKGRKQR 636
Query: 748 XXXXXXXXXXEAKXXXXXXXXXXXNANEDIVLINCMGDVLVSKDDCNKWNLTDPMTTSEG 807
E + D+ ++ +L W DP
Sbjct: 637 KKKVPLLTGEEIEI--------------DLTNMDAESPIL--------WLRIDP------ 668
Query: 808 DDLQQQNEAFEWIRIDSDFEWISKVHINQPDYMFASQLQQDRDVEAQVESVRFFEDVILN 867
D+ I ++ I+QP + + L+ +RDV AQ+E++ + + +
Sbjct: 669 -----------------DYLLIREITISQPMFHWEYMLRYERDVIAQMEALERIQ-ALPS 710
Query: 868 GTSNSLIYSSILTRTAMDPKYFHGVRLAACRALSKFTIKAEEQQEFKGGPRHLVQIFREL 927
S S+I ++ + K+F+ +R A L+ ++ + + G L+ +FRE
Sbjct: 711 AHSRSVIVDAV-----ANEKFFYRIRYRAAFVLT--FVQNRKSEALTVGTPVLINMFRES 763
Query: 928 F-CYEDSNIPKNNDF----SDYPKYFLQKAIPKLLSSVKNDEGVCPAFVKEFLLDVVRYN 982
F +NIP++N+F + +YF+ +A+P+ ++ ++ G C V+ FLLD++++N
Sbjct: 764 FGSKAATNIPRSNNFVVTAQNLQQYFVMQALPQAIARLRRQSGECHEDVQPFLLDLIKFN 823
Query: 983 DNTDNIYSDTFYITELLESL 1002
DN+ N YSD FY L SL
Sbjct: 824 DNSTNRYSDDFYRAALYNSL 843
>ECU09g0090 [K] KOG1932 TATA binding protein associated factor
Length = 1137
Score = 89.0 bits (219), Expect = 5e-17
Identities = 59/192 (30%), Positives = 98/192 (50%), Gaps = 22/192 (11%)
Query: 819 WIRIDSDFEWISKVHINQPDYMFASQLQQDRDVEAQVESVRFFEDVILNGTSNSLIYSSI 878
W+R D E ++K+ + QPDYMF QL D++V Q+E++ T S I
Sbjct: 537 WVRADPKGEHLAKIIVEQPDYMFIEQLL-DKNVVGQMEALESLS------TKPSTQVCEI 589
Query: 879 LTRTAMDPKYFHGVRLAACRALSKFTIKAEEQQEFKGGPRHLVQIFRELFCYEDSNIPKN 938
L R + F+ +R+ LS+ T+ G + L+Q F + +C + S + K
Sbjct: 590 LERVLENTHIFYKIRIHILYILSRTTVGNYY------GFQRLIQFFVKKYCVQTSTVVKP 643
Query: 939 NDFSDYPKYFLQKAIPKLLS--------SVKNDEGVCPAFVKEFLLDVVRYNDNTDNIYS 990
NDFS P YF+QK + + LS S E + F+++++++NDN+ N YS
Sbjct: 644 NDFSFIP-YFIQKHLVRALSIADPFVFRSYSGREVGSANIISAFIINILKFNDNSFNSYS 702
Query: 991 DTFYITELLESL 1002
D +YI+ ++ES+
Sbjct: 703 DGWYISSVIESI 714
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,672,766
Number of Sequences: 60738
Number of extensions: 3390548
Number of successful extensions: 8633
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8571
Number of HSP's gapped (non-prelim): 29
length of query: 1380
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1261
effective length of database: 23,161,394
effective search space: 29206517834
effective search space used: 29206517834
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)