ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0656 good K KOG2076 Transcription RNA polymerase III transcription factor TFIIIC
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0656 219826 216743 -1028
(1028 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR047c [K] KOG2076 RNA polymerase III transcription factor TFIIIC 1109 0.0
SPCC16C4.14c [K] KOG2076 RNA polymerase III transcription factor... 313 9e-85
Hs6912398 [K] KOG2076 RNA polymerase III transcription factor TF... 89 4e-17
CE29016 [K] KOG2076 RNA polymerase III transcription factor TFIIIC 63 3e-09
At1g17680 [K] KOG2076 RNA polymerase III transcription factor TF... 62 6e-09
ECU08g0840 [K] KOG2076 RNA polymerase III transcription factor T... 59 4e-08
7302835 [K] KOG2076 RNA polymerase III transcription factor TFIIIC 57 1e-07
SPBC23E6.09 [R] KOG1124 FOG: TPR repeat 53 3e-06
Hs18579281 [R] KOG1124 FOG: TPR repeat 51 8e-06
>YGR047c [K] KOG2076 RNA polymerase III transcription factor TFIIIC
Length = 1025
Score = 1109 bits (2869), Expect = 0.0
Identities = 563/1029 (54%), Positives = 752/1029 (72%), Gaps = 37/1029 (3%)
Query: 6 DDEEQFYEELDQYREIIERXXXXXXXXXXXNQRNSSEDEFN-EDNFDLLAEFSDYGEFSD 64
+DEE Y +D Y+ +I+ Q SEDE+N E + LLAEFSDYGE S+
Sbjct: 28 EDEEHLYGNIDDYKHLIQDEEYDDEDVPHDLQL--SEDEYNSERDSSLLAEFSDYGEISE 85
Query: 65 DDYDEQAFMDAIREANNFKRRKGKKS-AGTKHGPVPKQRRERPLDPEVAQLLSEANEAYV 123
DD E+ FM+AIREA+NFK +K KK+ G +G +QR+ER LDPEVAQLLS+ANEA+V
Sbjct: 86 DD--EEDFMNAIREASNFKVKKKKKNDKGKSYG---RQRKERVLDPEVAQLLSQANEAFV 140
Query: 124 RNDIQVAEQLYNKVIKADAKNFAAYKTLGDIYHLQGRFNDCCNSWFLAAHLNSTDWEFWK 183
RND+QVAE+L+N+VIK DA+NFAAY+TLGDIY LQGR NDCCNSWFLAAHLN++DWEFWK
Sbjct: 141 RNDLQVAERLFNEVIKKDARNFAAYETLGDIYQLQGRLNDCCNSWFLAAHLNASDWEFWK 200
Query: 184 MVAELSAELAHVRQAIYCYTRAIRINNEEWECIYNRALLYKEIGQLGRAFDGFQKLYAYD 243
+VA LSA+L HVRQAIYC++R I +N EWE IY R++LYK+ GQL RA DGFQ+LY Y+
Sbjct: 201 IVAILSADLDHVRQAIYCFSRVISLNPMEWESIYRRSMLYKKTGQLARALDGFQRLYMYN 260
Query: 244 PLDANILRELAVIYVEYNRVSEAIELYMKVFGDNVTRRNAFILAXXXXXXXXXXXXXXXX 303
P DANILRELA++YV+Y+R+ ++IELYMKVF NV RR A + A
Sbjct: 261 PYDANILRELAILYVDYDRIEDSIELYMKVFNANVERREAILAALENALDSSDEESAAEG 320
Query: 304 XXXXXLNLTQEELD--MYPNVSVKKIAKKHRCIPFDWSSLNILAELFIK-QNGELHGIKT 360
+++ D M+P+++ KKI K++CIPFDWSSLNILAELF+K E+ GIKT
Sbjct: 321 EDADEKEPLEQDEDRQMFPDINWKKIDAKYKCIPFDWSSLNILAELFLKLAVSEVDGIKT 380
Query: 361 IKKCARWIQYRETQTFWEDVYDDSEFDNRRFRNAKFQSLTEREKSKSYSLPIDIRVRLGL 420
IKKCARWIQ RE+QTFW+ V DDSEFDNRRF+N+ F SL EK KSY++PIDIRVRLGL
Sbjct: 381 IKKCARWIQRRESQTFWDHVPDDSEFDNRRFKNSTFDSLLAAEKEKSYNIPIDIRVRLGL 440
Query: 421 LRLNNKNVSEAMQQFQFLYEEKFDEIADLYFEVGVQLCKLDRYQEAIDFLAPLSQLDEYD 480
LRLN N+ EA+ FQ LY+E F ++ADLYFE L + ++Y+EAIDF PL L+E+
Sbjct: 441 LRLNTDNLVEALNHFQCLYDETFSDVADLYFEAATALTRAEKYKEAIDFFTPLLSLEEWR 500
Query: 481 TIELYRPLSKCFRELDQLENARDAFEKLVEFDPSDLEHKLSLAEVHHSLGNEDEFDKLLH 540
T ++++PL++C++E++ E A++ +E ++ +P DL+ ++SLAEV++ L + + F +L
Sbjct: 501 TTDVFKPLARCYKEIESYETAKEFYELAIKSEPDDLDIRVSLAEVYYRLNDPETFKHMLV 560
Query: 541 EVVEERKKQAKETAPEAPDDTSTGKKARPRLAIAPLEEELPSEEIRSATLGTGKPLLEDH 600
+VVE RK Q ET ++ S+ + +I S KPLLED
Sbjct: 561 DVVEMRKHQVDETLHRISNEKSSN----------------DTSDISS------KPLLEDS 598
Query: 601 NYXXXXXXXXXXXXXXXXXXXXXXXXXXSNVLNKYGQLQIYKEGMEVGDATKTTLWIDTA 660
+ + V++KY +++ ++ + +A + ++WI+T
Sbjct: 599 KF-RTFRKKKRTPYDAERERIERERRITAKVVDKYEKMKKFELNSGLNEAKQASIWINTV 657
Query: 661 SDLIDIFSSIKNFFVKSRSKKFVGIIKRSRKFNKVIDYRIEKLSKLSQGENLMDGLPLME 720
S+L+DIFSS+KNFF+KSRS+KFVGI++R++KFN +D++IE+LSKL++G+++ +G PLME
Sbjct: 658 SELVDIFSSVKNFFMKSRSRKFVGILRRTKKFNTELDFQIERLSKLAEGDSVFEG-PLME 716
Query: 721 EKITTSSTTELRGLTYDQWFELFMELALTIARLQSANDASSIIETASEVNVFSQHPERVK 780
E++T +S TELRGL+Y+QWFELFMEL+L IA+ QS D S++ETA EVNVF Q PERVK
Sbjct: 717 ERVTLTSATELRGLSYEQWFELFMELSLVIAKYQSVEDGLSVVETAQEVNVFFQDPERVK 776
Query: 781 MMKFVKLAIILRLQDEQEIVENLRGLLNQFQFNRKIFQLFMFSVSEGQTSLKILSSTVQQ 840
MMKFVKLAI+L++ DE+E+ ENLRGLLNQFQFNRK+ Q+FM+S+ G +SL ILSST+QQ
Sbjct: 777 MMKFVKLAIVLQMDDEEELAENLRGLLNQFQFNRKVLQVFMYSLCRGPSSLNILSSTIQQ 836
Query: 841 KFFLRQLKAFDSIRFGQHVNGQASITNK-VSNPERKICTYLNYIYAMLLYSSKGFMPALQ 899
KFFLRQLKAFDS R+ VNGQASITNK V NP +K YL YIYA+LLYSS+GF+ ALQ
Sbjct: 837 KFFLRQLKAFDSCRYNTEVNGQASITNKEVYNPNKKSSPYLYYIYAVLLYSSRGFLSALQ 896
Query: 900 YLKRIELEVGDDPMLDLIIGLSHLHRSMQRLTGNRQFQILQGLKYLYQYHEQRLKYYSDV 959
YL R+E ++ DDPM++L++GLSH+HR+MQRLT R FQI GL+YLY+YH+ R Y+D+
Sbjct: 897 YLTRLEEDIPDDPMVNLLMGLSHIHRAMQRLTAQRHFQIFHGLRYLYRYHKIRKSLYTDL 956
Query: 960 ERQEADYNIGRAYHLLGLFTPAVKYYNKVLNIYDDIKLKRHAAYNLTLIYNESENFNLSN 1019
E+QEADYN+GRA+HL+GL + A++YYN+VL YDD KLK+HAAYN +IY +S N L++
Sbjct: 957 EKQEADYNLGRAFHLIGLVSIAIEYYNRVLENYDDGKLKKHAAYNSIIIYQQSGNVELAD 1016
Query: 1020 DLMERYLSI 1028
LME+YLSI
Sbjct: 1017 HLMEKYLSI 1025
>SPCC16C4.14c [K] KOG2076 RNA polymerase III transcription factor TFIIIC
Length = 1006
Score = 313 bits (802), Expect = 9e-85
Identities = 256/1025 (24%), Positives = 449/1025 (42%), Gaps = 126/1025 (12%)
Query: 41 SEDEFNEDNFDLLAEFSDYGEFSDDDYDEQAFMDAIREANNFKR-RKGKKSAGTKHGPVP 99
S++E + + D + FS ++DD + + + ++ F++ RKG K G
Sbjct: 67 SDEESDYEGSDDESNFSKTASRTEDDIANEEWEENLKAVAGFRKVRKGHKGRGRV----- 121
Query: 100 KQRRERPLDPEVAQLLSEANEAYVRN-DIQVAEQLYNKVIKADAKNFAAYKTLGDIYHLQ 158
R + EV Q+LS AN + + + A++L ++++ D AA+K LG+ + +
Sbjct: 122 -SRADMLPSVEVQQMLSLANHLFAQEGNFDEAQKLAEEIVRIDNNVIAAWKMLGECHRQR 180
Query: 159 GR----FNDCCNSWFLAAHLNSTDWEFWKMVAELSAELAHVRQAIYCYTRAIRIN----N 210
G C +W AAHL D E W A+LS L QA YCY RA+ +
Sbjct: 181 GNGRVNIEKCLIAWMAAAHLKPKDHELWFTCAKLSESLEFWDQADYCYNRAVSAKPPNKS 240
Query: 211 EEWECIYNRALLYKEIGQLGRAFDGFQKLYAYDPLDANILRELAVIYVEYNRVSEAIELY 270
E + I+NR++L KE G L +A +GF+ L P +A+IL+ LA E+Y
Sbjct: 241 ELKKYIWNRSVLNKEHGSLKKAAEGFKFLLQSSPYNASILKNLA-------------EIY 287
Query: 271 MKVFGDNVTRRNAFILAXXXXXXXXXXXXXXXXXXXXXLNLTQEELDMYPNVSVKKIAKK 330
+K+ + + + YP +
Sbjct: 288 IKIHAPREILKQ--------------------------FEIAWKYFYQYPAPPIGNDI-- 319
Query: 331 HRCIPFDWSSLNILAELFIKQNGELHGIKTIKKCARWIQYRETQTFWEDVYDDSEFD--- 387
FD +LN+ AEL + + + I+ I + RW + R++++FW++ DD E+D
Sbjct: 320 -----FDLPTLNLYAELLLLDHQWSNLIRLINRGVRWFRGRKSESFWDEFDDDREWDVDE 374
Query: 388 -NRRFRNAKFQSLTEREKSKSYSLPIDIRVRLGLLRLNNKNVSEAMQQFQFLYEEKFDEI 446
R F NA E ++Y LP R +LG+ RL + EA F + D
Sbjct: 375 RRREFPNAS----EEHTNKEAYLLPHLFRTKLGIARLKTGELPEAELHFSVIKNLPPDYA 430
Query: 447 ADLYFEVGVQLCKLDRYQEAIDFLAPLSQLDEYDTIELYRPLSKCFRELDQLENARDAFE 506
+ +++ ++R A+++ + + I L+ + C+ EL + E+A+ E
Sbjct: 431 WGMLYDIAKAYMDIERLDLALEYFVLICNHEPAQNIGLWYNMGVCYLELKEYEHAQQCME 490
Query: 507 KLVEFDPSDLEHKLSLAEVHHSLGNEDEFDKLLHEVVEERKKQAKETAPEAPDDTSTGKK 566
++ D S+ + LAE++ N D +++ + E+R+
Sbjct: 491 AILIVDNSNTNALIKLAEINELQDNRDAALEIVTNIFEQRRN------------------ 532
Query: 567 ARPRLAIAPLEEELPSEEIRSATLGTGKPLLEDHNYXXXXXXXXXXXXXXXXXXXXXXXX 626
I LE E E +G+ + + +
Sbjct: 533 ------INELEREQSQNEDHEKNVGS-QLFVGNQKVPQDKWEKRARISRSKEEARQFTIW 585
Query: 627 XXSNVLNKYGQLQIYKEGMEVGDATKTTL--WIDTASDLIDIFSSIKNFFV-KSRSKKFV 683
++ +L I ++ ++ + +L W+ AS+LID F SIK FF + +++
Sbjct: 586 KTEETQRRFHKLDILRQSLKKEENVSESLNEWLAIASELIDEFVSIKAFFPSEKKARARA 645
Query: 684 GIIKRSRKFNKVIDYRIEKLSKLSQGENLMDGLPLMEEKITTSSTTELRGLTYDQWFELF 743
G++ R ++ + D +++L+ L + T T R ++ D W++LF
Sbjct: 646 GLLTRRTRYASLNDQLTSMINRLNDSLTRTKYGDL--DLDTILRTGYFRNVSIDAWYQLF 703
Query: 744 MELALTIARLQSANDASSIIETASEVNVFSQHPERVKMMKFVKLAIILRLQDEQEIVENL 803
+E +L + ++ S A ++ TA +F Q + + +++ LA + +D Q + L
Sbjct: 704 VEFSLRLTKVGSVQQAYDVLTTAMGAILFDQDTIKRQNLRWCMLACSMYARDPQGALTPL 763
Query: 804 RGLLNQFQFNRKIFQLFMFSVSEGQTSLKILSSTVQQKFFLRQLKAFDSIRFGQHVNGQA 863
R + FQF + ++LF +S+G + + QKF LR +K D + V+G A
Sbjct: 764 RWVFTTFQFRQDTYRLFSAVLSQGYECSRAFVDSANQKFLLRLIKLMDQLMSNSLVSGAA 823
Query: 864 SITNKVSNPERKICTY---LNYIYAMLLYSSKGFMPALQYLKRIELEVGDDPMLDLIIGL 920
++ +Y L +Y ++ ++ ++PA+ Y R D P+ +L +GL
Sbjct: 824 TLVKNDDGLATVPTSYDPVLVLLYGHIMARNRSWIPAINYYSRAFAINPDCPITNLSLGL 883
Query: 921 SHLHRSMQRLTGNRQFQILQGLKYLYQYHEQRLKYYSDVERQEADYNIGRAYHLLGLFTP 980
++LHR+MQRL+ NR +QILQG +LY+Y++ R+ E+QEA YN+G+AYH +GL
Sbjct: 884 AYLHRAMQRLSDNRHYQILQGFTFLYRYYDLRVNEGLG-EKQEALYNLGKAYHFIGLEHY 942
Query: 981 AVKYYNKVLNI-------------------YDDIKLKRHAAYNLTLIYNESENFNLSNDL 1021
AVKYY VL + YD AAYNL LIY S N L+ +
Sbjct: 943 AVKYYEAVLGLSPMSQGDKMTSSESTVSTTYD---FGFEAAYNLRLIYICSGNIKLAFQI 999
Query: 1022 MERYL 1026
+YL
Sbjct: 1000 SSKYL 1004
>Hs6912398 [K] KOG2076 RNA polymerase III transcription factor TFIIIC
Length = 886
Score = 89.0 bits (219), Expect = 4e-17
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 100 KQRRERPLDPEVAQ-LLSEANEAYVRNDIQVAEQLYNKVIKADAKNFAAYKTLGDIYHLQ 158
K++R R P + L+ EAN + R + + A + ++I+ + + TL IY Q
Sbjct: 137 KEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQ 196
Query: 159 GRFNDCCNSWFLAAHLNSTDWEFWKMVAELSAELAHVRQAIYCYTRAIRINNEEWECIYN 218
G +AAHLN +D E W +AE+S E +++QAI+CYT+A++ ++
Sbjct: 197 GDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWE 256
Query: 219 RALLYKEIGQLGRAFDGFQK-LYAYDPLDA----NILRELAVIYVEYNRVSEAIELYMKV 273
R+ LY+++G A DG+++ L P D + R++A Y E N V+ AI + +
Sbjct: 257 RSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINIIDEA 316
Query: 274 F 274
F
Sbjct: 317 F 317
Score = 82.0 bits (201), Expect = 4e-15
Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 48/305 (15%)
Query: 734 LTYDQWFELFMELALTIARLQSANDASSIIETASEVNVFSQHPERVKMMKFVKLAIILRL 793
LT D W+ L ++ ++ L +A +++++ E F ++ K +++ L+ +
Sbjct: 620 LTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILD 679
Query: 794 QDEQEIVENLRGLLNQFQFNRKIFQLFMFSVSEGQTSLKILSSTVQQKFFLRQLKAFDSI 853
++ ++ +R ++ + +++ +F Q +F LR +
Sbjct: 680 KNFRKAYNYIRIMVMENVNKPQLWNIFNQVTMHSQ-------DVRHHRFCLRLM------ 726
Query: 854 RFGQHVNGQASITNKVSNPERKICTYLNYIYAMLLYSSKGFMPAL-QYLKRIELEVGDDP 912
+ NPE LN A + S F AL QY++ D+P
Sbjct: 727 ---------------LKNPENHALCVLNGHNAFV---SGSFKHALGQYVQAFRTHP-DEP 767
Query: 913 MLDLIIGLSHLHRSMQRLTGNRQFQILQGLKYLYQYHEQRLKYYSDVERQEADYNIGRAY 972
+ IGL+ +H + Q+ R I+QG +L +Y R QE+ YN+GR
Sbjct: 768 LYSFCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYLSLRGPC------QESFYNLGRGL 821
Query: 973 HLLGLFTPAVKYYNKVLNI---------YDDIKLKRHAAYNLTLIYNESENFNLSNDLME 1023
H LGL A+ YY K L + D + L+R AYNL+LIY S N ++ L+
Sbjct: 822 HQLGLIHLAIHYYQKALELPPLVVEGIELDQLDLRRDIAYNLSLIYQSSGNTGMAQTLLY 881
Query: 1024 RYLSI 1028
Y SI
Sbjct: 882 TYCSI 886
>CE29016 [K] KOG2076 RNA polymerase III transcription factor TFIIIC
Length = 1037
Score = 62.8 bits (151), Expect = 3e-09
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 19/225 (8%)
Query: 6 DDEEQFYEELDQYREIIERXXXXXXXXXXXNQRNSSEDEFN----EDNFDLLAEFSDYGE 61
DDEE+ E+++ ++ E Q D ++ E + + S E
Sbjct: 135 DDEEEDDEDVELMEDVEEVSTSQHAGSSYSFQSAGPSDRYDALPEEARYIMTQMMSGKDE 194
Query: 62 FSDDDYDEQAFMDAI----REANNFKRRK--GKK--SAGTKHGPVPKQRRERPLDPEVAQ 113
+ DE + RE K+ K G+K S T+ + R+R +
Sbjct: 195 GQVNHSDEMEVEYEVETEEREPPPLKQVKIEGQKADSTSTETPATNAEPRDRGKLKRLDA 254
Query: 114 LLSEANEAYVRNDIQVAEQLYNKVIKADAKNFAAYKTLGDIYHLQGRFNDCCNSWFLAAH 173
+L +AN R +I A ++ +VIK D K+ AY+ + +Y G LA+H
Sbjct: 255 MLGQANVLAARGNITDAMEILREVIKQDHKHAIAYQQIATVYEQLGDHQKALQFGLLASH 314
Query: 174 LN----STDWEFWKMVAELSAELAHVRQAIYCYTRAIRINNEEWE 214
L+ DW W AE + + +A CY RAI +NNE W+
Sbjct: 315 LDPKTPPDDWVHWGDEAE---KFGMIEEAAVCYDRAIHLNNENWK 356
Score = 52.8 bits (125), Expect = 3e-06
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 24/136 (17%)
Query: 911 DPMLDLIIGLSHLHRSMQRLTGNRQFQILQGLKYLYQYHEQRLKYYSDVERQEADYNIGR 970
+P++ +++ L+ H S ++ +R ++G+ ++ +Y + R +QE YNI R
Sbjct: 908 NPLICMLLALTFTHMSCKKDLSSRHLIGIRGIAFMKKYSKARAC------QQEVFYNIAR 961
Query: 971 AYHLLGLFTPAVKYYNKVLNI-------YDD-----------IKLKRHAAYNLTLIYNES 1012
+H + + A +Y+KVL + +D+ L++ AA+NL LIY S
Sbjct: 962 MFHQMSILPLAKHFYDKVLEVDPPCVFDFDEDGNEVIIPAMKYDLRKMAAHNLALIYRTS 1021
Query: 1013 ENFNLSNDLMERYLSI 1028
N + + E+YL +
Sbjct: 1022 GNNFAARKIYEKYLVV 1037
>At1g17680 [K] KOG2076 RNA polymerase III transcription factor TFIIIC
Length = 882
Score = 61.6 bits (148), Expect = 6e-09
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 29/149 (19%)
Query: 897 ALQYLKRIELEVGDDPMLDLIIGLSHLHRSMQRLTGNRQFQILQGLKYLYQYHEQRLKYY 956
A +YL+ +L + + P+++L +G + ++ ++ NR + QG +LY L+
Sbjct: 736 AREYLEAYKL-MPESPLINLCVGAALINLALGFRLKNRHECLAQGFAFLYN----NLRIC 790
Query: 957 SDVERQEADYNIGRAYHLLGLFTPAVKYYNKVLNIYD----------------------D 994
S+ QEA YN+ RAY +GL T A YY KVL IY+ +
Sbjct: 791 SN--SQEALYNVARAYQHVGLVTLAASYYEKVLAIYEKDYTMPKLPNEDPIVAEERKPVN 848
Query: 995 IKLKRHAAYNLTLIYNESENFNLSNDLME 1023
L++ AA+NL LIY S F+L+ +++
Sbjct: 849 CDLRKEAAHNLHLIYKHSGAFDLARQVLK 877
>ECU08g0840 [K] KOG2076 RNA polymerase III transcription factor TFIIIC
Length = 795
Score = 58.9 bits (141), Expect = 4e-08
Identities = 49/192 (25%), Positives = 83/192 (42%), Gaps = 16/192 (8%)
Query: 84 RRKGKKSAGTKHGPVPKQRRERPLDPEVAQLLSEANEAYVRNDIQVAEQLYNKVIKADAK 143
RR +KS+ V K R LL+ AN YVRND++ ++ + I +
Sbjct: 25 RRPRRKSSSRGSQRVAKAR----------SLLAIANNLYVRNDLERCTEVLKEAICLVPR 74
Query: 144 NFAAYKTLGDIYHLQGRFNDCCNSWFLAAHLNSTDWEFWKMVAELSAELAHVRQAIYCYT 203
N Y TLG I+ +G + +AAHL ++ W + + S +L + R+ IY +
Sbjct: 75 NPQPYFTLGLIFEERGDITKAYYCFLVAAHLQKNNYGLWSKLYDYSRQLGYNRERIY-FI 133
Query: 204 RAIRINNEEWECIYNRALLYKEIGQLGRAFDGFQKLYAYDPLDANILRELAVIYVEYNRV 263
++ + E + + LY+ G R +L+ +D +D I R I+ E
Sbjct: 134 EVLQRRGSKREMVVEKMSLYQ--GDKFRELTCRIELFEFDGVDDGIFR---AIHEEITHK 188
Query: 264 SEAIELYMKVFG 275
+ L K+ G
Sbjct: 189 ARLARLAKKLLG 200
>7302835 [K] KOG2076 RNA polymerase III transcription factor TFIIIC
Length = 868
Score = 57.0 bits (136), Expect = 1e-07
Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 55 EFSDYGEFSDDDYDEQAFMDAIREANNFKRRKGKKSAGTKHGPVPKQR-RERPLDPEVAQ 113
E SD E +D+ +A +I + N + K + T G R+ L +
Sbjct: 80 EASDEDEEGNDEEPSEA-AGSIEKPNTSAQAKTSQEQSTGSGRSGGGGFRKSQLSTALQG 138
Query: 114 LLSEANEAYVRNDIQVAEQLYNKVIKADAKNFAAYKTLGDIYHLQGRFNDCCNSWFLAAH 173
L+ EAN ++V + AE++ ++I+ + + TL +IY + N LAAH
Sbjct: 139 LMGEANLSFVYGRYETAERICMEIIRQNPLASEPFYTLAEIYENRDEVK-FLNFSTLAAH 197
Query: 174 LNSTDWEFWKMVAELSAELAHVRQAIYCYTRAIRINNEEWECIYNRALLYKEIGQLGRAF 233
LN D + W V++L + ++ +A YT+AI++ + ++ +A L +++G+ +
Sbjct: 198 LNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLLQKMGETNASM 257
Query: 234 DGFQKLYAYDPLD 246
+ K+ P D
Sbjct: 258 FTYLKMLPLMPPD 270
Score = 51.2 bits (121), Expect = 8e-06
Identities = 67/312 (21%), Positives = 120/312 (37%), Gaps = 46/312 (14%)
Query: 726 SSTTELRGLTYDQWFELFMELALTIARLQSANDASSIIETASEVNVFSQHPERVKMMKFV 785
++ +E LT FELF EL T + + A I F+ + ++ +
Sbjct: 588 NAASETSDLTVKDEFELFRELVRTAFKHGMHSAAEKICFAMVTTKRFTYYHHEIERI--- 644
Query: 786 KLAIILRLQDEQEIVENLRGLLNQFQFNRKIFQLFMFSVSEGQTSLKILSSTVQQKFFLR 845
+ + D+ I F + R++ + QT+L + S + QK
Sbjct: 645 -MVLTCYYNDDCAIA---------FSYLRELI-----AKQPSQTTLWNMLSLMIQKG--- 686
Query: 846 QLKAFDSIRFGQHVNGQASITNKVSNPERKICTYLNYIYAMLLYSSKGFMPALQYLKRIE 905
D +R+ +++ + P R + + A Y+ +MP L+
Sbjct: 687 -----DEVRYYRYMRRLMQRHPVDTKPMRIFQGHYHLNCASFKYALNIYMPILRE----- 736
Query: 906 LEVGDDPMLDLIIGLSHLHRSMQRLTGNRQFQILQGLKYLYQYHEQRLKYYSDVE---RQ 962
DP++ L I ++ S+Q+ + + Q + + +Y E R + + +Q
Sbjct: 737 ---NPDPLVALCIAVAFNQLSLQKKVLRKSASVAQAVAFGQRYKELRSAGHELADCAAQQ 793
Query: 963 EADYNIGRAYHLLGLFTPAVKYYNKVLNI---------YDDIKLKRHAAYNLTLIYNESE 1013
E YNIGR YH + AV YY K L + + L+ A+NL LIY +
Sbjct: 794 EIFYNIGRIYHQANILHLAVDYYEKALAVPVHPLIAEHESTLGLQHEVAFNLHLIYRANG 853
Query: 1014 NFNLSNDLMERY 1025
N + + RY
Sbjct: 854 NKWKARQYLMRY 865
>SPBC23E6.09 [R] KOG1124 FOG: TPR repeat
Length = 1102
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 110 EVAQLLSEANEAYVRNDIQVAEQLYNKVIKADAKNFAAYKTLGDIYHLQGRFNDCCNSWF 169
++ L + + ++ D+ + Q K ++AD + ++ +G Y Q ++N ++
Sbjct: 551 QLGWLCHQQSSSFTNQDLAI--QYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQ 608
Query: 170 LAAHLNSTDWEFWKMVAELSAELAHVRQAIYCYTRAIRINNEEWECIYNRALLYKEI-GQ 228
A + + + FW + L ++ + A+ Y+RAIR+N E Y+ LY+ Q
Sbjct: 609 QAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESCHNQ 668
Query: 229 LGRAFDGFQKLYAYDPLDANILRELAVI 256
+ A D +Q+ DP + +I L ++
Sbjct: 669 ISDALDAYQRAAELDPTNPHIKARLQLL 696
>Hs18579281 [R] KOG1124 FOG: TPR repeat
Length = 733
Score = 51.2 bits (121), Expect = 8e-06
Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 115 LSEANEAYVRNDIQVAEQLYNKVIKADAKNFAAYKTLGDIYHLQGRFNDCCNSWFLAAHL 174
L ANE+ ++ A+QLY + I AY + G++ + ++ A L
Sbjct: 356 LIRANESR----LEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALEL 411
Query: 175 NSTDWEFWKMVAELSAELAHVRQAIYCYTRAIRINNEEWECIYNRALLYKEIGQLGRAFD 234
+ + + W +A + EL +A+ + RA+ +N + ++N A++ +E G++ +
Sbjct: 412 DRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPE 471
Query: 235 GFQKLYAY---DPLDANILRELAVIYVEYNRVSEAIELYMK 272
++L +Y +PLDAN L ++ ++ + +EA E++MK
Sbjct: 472 ARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNEA-EIWMK 511
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,864,869
Number of Sequences: 60738
Number of extensions: 2420273
Number of successful extensions: 8655
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8593
Number of HSP's gapped (non-prelim): 35
length of query: 1028
length of database: 30,389,216
effective HSP length: 117
effective length of query: 911
effective length of database: 23,282,870
effective search space: 21210694570
effective search space used: 21210694570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)