ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII0677  suspect: LH   O     KOG0716  Posttranslational modification, protein turnover, chaperones   Molecular chaperone (DnaJ superfamily)

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII0677  227533 226724 -270 
         (270 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YGL128c [O] KOG0716 Molecular chaperone (DnaJ superfamily)             80   2e-15

>YGL128c [O] KOG0716 Molecular chaperone (DnaJ superfamily)
          Length = 347

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 69/284 (24%), Positives = 134/284 (46%), Gaps = 21/284 (7%)

Query: 2   DLAHVKDNHVDLYRILHIHVNDNEHLNSVTPTLINKQFRKLSLTLHPDKSNESDLNITRD 61
           +L  V +  ++LY +L +    + H        I +++R L+L  HPDK  ++   I   
Sbjct: 69  ELEDVINQRLNLYDVLELPTPLDVHTIYDDLPQIKRKYRTLALKYHPDKHPDNPSII--H 126

Query: 62  RWDNLQSAYRILS--EHKKEYDIWYQRTFLHSN----RELLEKLEISEKAKKEKLISYDE 115
           ++  L +A  IL+  + +  YD W       +N     +L++KLE SE +       + +
Sbjct: 127 KFHLLSTATNILTNADVRPHYDRWLIEFLRKTNDIERNKLIQKLEESESSTIPTTTPHPD 186

Query: 116 IEKIQRYGQTLRKLVHFEIPISDWR--NPSFTENTDDLNKLTETCLFRIKLVKRKEYNNE 173
           + +IQR+G+ LRKL HF +P  DW+  N    EN    +   +    RI L    + NN+
Sbjct: 187 LLQIQRHGELLRKLKHFNLPYGDWKHLNTQDQENASQ-HPYYDCSTLRIVLDNFLQSNNK 245

Query: 174 QK-LNEWFRKIDIPITVQ-----YYSENNDQREDDLVVYASARNVQTTIEILRTIENEKE 227
              L+    ++ I ++       Y+SE N+  +DD ++  +  +   T + +    +   
Sbjct: 246 SNCLSHLRNQVFITLSANEIYDIYFSERNNYSKDDSIIIYTVFDTPITAQHVFRNWSSGN 305

Query: 228 LHPDILEFTPAVEFEHFS-FKEKVELDPSLGSIIYNSSDNPIIM 270
           L P + + +P +   ++S F  + EL+  +  ++   S+ PI++
Sbjct: 306 LIPTVKDISPLIPLHYYSDFNLETELNDDIARLV---SNEPILL 346


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,161,837
Number of Sequences: 60738
Number of extensions: 755137
Number of successful extensions: 2892
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2891
Number of HSP's gapped (non-prelim): 1
length of query: 270
length of database: 30,389,216
effective HSP length: 105
effective length of query: 165
effective length of database: 24,011,726
effective search space: 3961934790
effective search space used: 3961934790
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)