ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII0709  suspect: LH   S     KOG4595  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII0709  239189 238698 -164 
         (164 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNL260c [S] KOG4595 Uncharacterized conserved protein                 126   1e-29

>YNL260c [S] KOG4595 Uncharacterized conserved protein
          Length = 198

 Score =  126 bits (317), Expect = 1e-29
 Identities = 67/165 (40%), Positives = 103/165 (61%), Gaps = 4/165 (2%)

Query: 1   MDFDELLNLXXXXXXXXXXXXRNENLKHNLLEGKQYGLQVGFQRFQLLGIIYGISDVL-I 59
           MDFD LLNL            +NEN+K + LEGKQYGLQVGFQRF LLG + G+ DV+  
Sbjct: 37  MDFDNLLNLEEQYYQEGFLEGQNENIKQSFLEGKQYGLQVGFQRFTLLGQMEGLCDVIES 96

Query: 60  QKFDDAALQKNAKVIKDLIEEIQMDNNQENVAIYEKSIFKIRNKFRLVLMSLHKNISSID 119
                  L+KN   I+ L++ ++M+N+ E+V  +E+ + K++NKFR +L++LH+ +   D
Sbjct: 97  YGLHSPTLEKNIHTIRTLMKGLKMNNDDESVMEFERVLIKLKNKFRTILITLHRLVK--D 154

Query: 120 SSSDRLTLEKIESLSREIAGKLHGYTEDDSGSNNETMMQDQTTDW 164
             +  +T E  E +SR IAG++ G+ E++  + N+T  Q+Q   W
Sbjct: 155 KRTPTVTFEVFEDVSRAIAGEIRGFVENEDIAKNKT-KQNQAQSW 198


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.135    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,239,107
Number of Sequences: 60738
Number of extensions: 295084
Number of successful extensions: 1131
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1128
Number of HSP's gapped (non-prelim): 1
length of query: 164
length of database: 30,389,216
effective HSP length: 98
effective length of query: 66
effective length of database: 24,436,892
effective search space: 1612834872
effective search space used: 1612834872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)