ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0713 good P KOG1603 Inorganic ion transport and metabolism Copper chaperone
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0713 239813 239592 -74
(74 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL259c [P] KOG1603 Copper chaperone 108 2e-24
SPBC1709.10c [P] KOG1603 Copper chaperone 68 2e-12
7296474_2 [P] KOG1603 Copper chaperone 65 2e-11
CE29163 [P] KOG1603 Copper chaperone 55 2e-08
Hs4757804 [P] KOG1603 Copper chaperone 47 6e-06
>YNL259c [P] KOG1603 Copper chaperone
Length = 73
Score = 108 bits (269), Expect = 2e-24
Identities = 52/73 (71%), Positives = 60/73 (81%)
Query: 1 MSSTNHYQFNVQMSCSGCSSAVERALSKLEPEVSKTEISLEKQTVDVYTSLPYDTVLEKI 60
M+ HYQFNV M+CSGCS AV + L+KLEP+VSK +ISLEKQ VDVYT+LPYD +LEKI
Sbjct: 1 MAEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKI 60
Query: 61 KKTGKEVISGTTL 73
KKTGKEV SG L
Sbjct: 61 KKTGKEVRSGKQL 73
>SPBC1709.10c [P] KOG1603 Copper chaperone
Length = 68
Score = 68.2 bits (165), Expect = 2e-12
Identities = 36/67 (53%), Positives = 45/67 (66%), Gaps = 2/67 (2%)
Query: 7 YQFNVQMSCSGCSSAVERALSKLEPEVSKTEISLEKQTVDVYTSLPYDTVLEKIKKTGKE 66
YQFNV M+C GC +A++R L++L V IS+EKQ V V T PY+ V + IKKTGKE
Sbjct: 3 YQFNVAMACDGCKNAIDRVLTRLG--VEDKSISVEKQEVIVTTDKPYELVEQTIKKTGKE 60
Query: 67 VISGTTL 73
V SG L
Sbjct: 61 VRSGKVL 67
>7296474_2 [P] KOG1603 Copper chaperone
Length = 68
Score = 64.7 bits (156), Expect = 2e-11
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 7 YQFNVQMSCSGCSSAVERALSKLEPEVSKTEISLEKQTVDVYTSLPYDTVLEKIKKTGK 65
++F V+M+C GC+SAVER L KL +V K I+LE +TV V ++L D ++E+++KTGK
Sbjct: 1 HEFKVEMTCGGCASAVERVLGKLGDKVEKVNINLEDRTVSVTSNLSSDELMEQLRKTGK 59
>CE29163 [P] KOG1603 Copper chaperone
Length = 69
Score = 55.1 bits (131), Expect = 2e-08
Identities = 26/62 (41%), Positives = 41/62 (65%), Gaps = 1/62 (1%)
Query: 7 YQFNVQMSCSGCSSAVERALSKL-EPEVSKTEISLEKQTVDVYTSLPYDTVLEKIKKTGK 65
Y F + M+C+GC++A + L KL E ++ +I++E + + V T LP VLE +KKTGK
Sbjct: 4 YVFEMGMTCNGCANAARKVLGKLGEDKIKIDDINVETKKITVTTDLPASDVLEALKKTGK 63
Query: 66 EV 67
E+
Sbjct: 64 EI 65
>Hs4757804 [P] KOG1603 Copper chaperone
Length = 68
Score = 46.6 bits (109), Expect = 6e-06
Identities = 25/61 (40%), Positives = 37/61 (59%), Gaps = 2/61 (3%)
Query: 7 YQFNVQMSCSGCSSAVERALSKLEPEVSKTEISLEKQTVDVYTSLPYDTVLEKIKKTGKE 66
++F+V M+C GC+ AV R L+KL K +I L + V + + DT+L +KKTGK
Sbjct: 4 HEFSVDMTCGGCAEAVSRVLNKLGG--VKYDIDLPNKKVCIESEHSMDTLLATLKKTGKT 61
Query: 67 V 67
V
Sbjct: 62 V 62
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.306 0.122 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,741,254
Number of Sequences: 60738
Number of extensions: 105831
Number of successful extensions: 443
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 438
Number of HSP's gapped (non-prelim): 5
length of query: 74
length of database: 30,389,216
effective HSP length: 50
effective length of query: 24
effective length of database: 27,352,316
effective search space: 656455584
effective search space used: 656455584
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)