ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0754 good O KOG4400 Posttranslational modification, protein turnover, chaperones E3 ubiquitin ligase interacting with arginine methyltransferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII0754 253790 253323 -156
(156 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL255c [O] KOG4400 E3 ubiquitin ligase interacting with arginin... 253 7e-68
SPAC13D6.02c [O] KOG4400 E3 ubiquitin ligase interacting with ar... 140 7e-34
Hs4827071 [O] KOG4400 E3 ubiquitin ligase interacting with argin... 133 1e-31
At4g36020 [J] KOG3070 Predicted RNA-binding protein containing P... 132 2e-31
At2g17870 [J] KOG3070 Predicted RNA-binding protein containing P... 108 4e-24
Hs20552876 [O] KOG4400 E3 ubiquitin ligase interacting with argi... 104 5e-23
At3g43590 [O] KOG4400 E3 ubiquitin ligase interacting with argin... 98 5e-21
7291506 [O] KOG4400 E3 ubiquitin ligase interacting with arginin... 97 9e-21
CE21045 [O] KOG4400 E3 ubiquitin ligase interacting with arginin... 93 2e-19
CE29052 [A] KOG0335 ATP-dependent RNA helicase 87 7e-18
CE09012 [A] KOG0335 ATP-dependent RNA helicase 80 1e-15
CE25121 [A] KOG0335 ATP-dependent RNA helicase 78 6e-15
At5g52380 [O] KOG4400 E3 ubiquitin ligase interacting with argin... 75 5e-14
At3g42860 [O] KOG4400 E3 ubiquitin ligase interacting with argin... 74 8e-14
At5g36240 [O] KOG4400 E3 ubiquitin ligase interacting with argin... 69 3e-12
SPBP35G2.08c [O] KOG4400 E3 ubiquitin ligase interacting with ar... 63 1e-10
Hs14150027 [O] KOG4400 E3 ubiquitin ligase interacting with argi... 63 1e-10
SPAC683.02c [O] KOG4400 E3 ubiquitin ligase interacting with arg... 60 2e-09
YDL175c [O] KOG4400 E3 ubiquitin ligase interacting with arginin... 57 8e-09
CE27916 [O] KOG4400 E3 ubiquitin ligase interacting with arginin... 55 3e-08
YIL079c [O] KOG4400 E3 ubiquitin ligase interacting with arginin... 55 5e-08
CE29051 [A] KOG0335 ATP-dependent RNA helicase 53 2e-07
Hs22045627_2 [O] KOG4400 E3 ubiquitin ligase interacting with ar... 52 3e-07
Hs14994312_2 [O] KOG4400 E3 ubiquitin ligase interacting with ar... 49 4e-06
ECU11g0650 [O] KOG4400 E3 ubiquitin ligase interacting with argi... 48 5e-06
At3g53500 [A] KOG0107 Alternative splicing factor SRp20/9G8 (RRM... 48 5e-06
>YNL255c [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 153
Score = 253 bits (646), Expect = 7e-68
Identities = 107/157 (68%), Positives = 130/157 (82%), Gaps = 11/157 (7%)
Query: 1 MSGKACYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKT 60
MS KACY+CGK+GHLA DCDSE+LCYNCNKPGHVQ++CT+P+TVEFKQCYNCGETGHV++
Sbjct: 1 MSQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRS 60
Query: 61 ECTVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEP---- 116
ECTVQ+C+NC+ GHISREC +PK+ KVSCYKCGGPNH+AKDC+K +
Sbjct: 61 ECTVQRCFNCNQTGHISRECPEPKKTSRFS----KVSCYKCGGPNHMAKDCMKEDGISGL 116
Query: 117 TCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDC 153
CY CGQAGH+S+DCQ N+++CYNCN GHI+KDC
Sbjct: 117 KCYTCGQAGHMSRDCQ---NDRLCYNCNETGHISKDC 150
Score = 61.6 bits (148), Expect = 4e-10
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 97 SCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDCQNGENE--KVCYNCNGVGHIAKDCS 154
+CY CG H+A+DC SE CYNC + GH+ DC K CYNC GH+ +C+
Sbjct: 5 ACYVCGKIGHLAEDC-DSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECT 63
Score = 54.3 bits (129), Expect = 7e-08
Identities = 20/41 (48%), Positives = 30/41 (72%), Gaps = 3/41 (7%)
Query: 114 SEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDCS 154
S+ CY CG+ GHL++DC ++E++CYNCN GH+ DC+
Sbjct: 2 SQKACYVCGKIGHLAEDC---DSERLCYNCNKPGHVQTDCT 39
>SPAC13D6.02c [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 179
Score = 140 bits (353), Expect = 7e-34
Identities = 67/167 (40%), Positives = 92/167 (54%), Gaps = 22/167 (13%)
Query: 3 GKACYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTEC 62
G CY CG+ GH A +C +CYNCN+ GH SECT P+ + K CY CG GH+ +C
Sbjct: 16 GPRCYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQ--QEKTCYACGTAGHLVRDC 73
Query: 63 TVQ-------KCYNCDGFGHISRECDQPKRFRNNERSGPK-------VSCYKCGGPNHIA 108
+CY C GHI+R+C N ++SG + ++CY CG H A
Sbjct: 74 PSSPNPRQGAECYKCGRVGHIARDCR-----TNGQQSGGRFGGHRSNMNCYACGSYGHQA 128
Query: 109 KDCLKSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDCSS 155
+DC CY+CG+ GH S +CQ + ++CY CN GHIA +C+S
Sbjct: 129 RDCTMG-VKCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNCTS 174
Score = 70.9 bits (172), Expect = 7e-13
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 91 RSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIA 150
R GP+ CY CG H A++C K CYNC Q GH + +C + EK CY C GH+
Sbjct: 14 RPGPR--CYNCGENGHQARECTKGS-ICYNCNQTGHKASECTEPQQEKTCYACGTAGHLV 70
Query: 151 KDCSS 155
+DC S
Sbjct: 71 RDCPS 75
Score = 66.6 bits (161), Expect = 1e-11
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 3 GKACYICGKLGHLASDCD--------------SEKLCYNCNKPGHVQSECTVPKTVEFKQ 48
G CY CG++GH+A DC S CY C GH +CT+ +
Sbjct: 82 GAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGV-----K 136
Query: 49 CYNCGETGHVKTECTV----QKCYNCDGFGHISRECDQP 83
CY+CG+ GH EC Q CY C+ GHI+ C P
Sbjct: 137 CYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNCTSP 175
Score = 59.3 bits (142), Expect = 2e-09
Identities = 25/62 (40%), Positives = 31/62 (49%), Gaps = 2/62 (3%)
Query: 2 SGKACYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTE 61
S CY CG GH A DC CY+C K GH EC + + + CY C + GH+
Sbjct: 114 SNMNCYACGSYGHQARDCTMGVKCYSCGKIGHRSFEC--QQASDGQLCYKCNQPGHIAVN 171
Query: 62 CT 63
CT
Sbjct: 172 CT 173
>Hs4827071 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 177
Score = 133 bits (334), Expect = 1e-31
Identities = 59/131 (45%), Positives = 78/131 (59%), Gaps = 18/131 (13%)
Query: 6 CYICGKLGHLASDCD-SEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTEC-- 62
CY CG+ GHLA DCD E CYNC + GH+ +C PK + CYNCG+ GH+ +C
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Query: 63 -TVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLK-SEPTCYN 120
QKCY+C FGHI ++C KV CY+CG H+A +C K SE CY
Sbjct: 114 ADEQKCYSCGEFGHIQKDC-------------TKVKCYRCGETGHVAINCSKTSEVNCYR 160
Query: 121 CGQAGHLSKDC 131
CG++GHL+++C
Sbjct: 161 CGESGHLAREC 171
Score = 113 bits (282), Expect = 1e-25
Identities = 58/189 (30%), Positives = 84/189 (43%), Gaps = 52/189 (27%)
Query: 1 MSGKACYICGKLGHLASDCDS-----------------------------EKLCYNCNKP 31
MS C+ CG+ GH A +C + +CY C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 32 GHVQSECTVPKTVEFKQCYNCGETGHVKTECTVQK------CYNCDGFGHISRECDQPKR 85
GH+ +C + + CYNCG GH+ +C K CYNC GH++R+CD
Sbjct: 61 GHLAKDCDLQEDA----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH--- 113
Query: 86 FRNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNG 145
+ CY CG HI KDC K + CY CG+ GH++ +C +E CY C
Sbjct: 114 -------ADEQKCYSCGEFGHIQKDCTKVK--CYRCGETGHVAINCSK-TSEVNCYRCGE 163
Query: 146 VGHIAKDCS 154
GH+A++C+
Sbjct: 164 SGHLARECT 172
Score = 70.1 bits (170), Expect = 1e-12
Identities = 32/79 (40%), Positives = 43/79 (53%), Gaps = 17/79 (21%)
Query: 4 KACYICGKLGHLASDCD--SEKLCYNCNKPGHVQSECTVPKTVEFKQ------------- 48
+ CY CGK GHLA DCD E+ CY+C + GH+Q +CT K +
Sbjct: 96 QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSE 155
Query: 49 --CYNCGETGHVKTECTVQ 65
CY CGE+GH+ ECT++
Sbjct: 156 VNCYRCGESGHLARECTIE 174
>At4g36020 [J] KOG3070 Predicted RNA-binding protein containing PIN domain and
invovled in translation or RNA processing
Length = 299
Score = 132 bits (331), Expect = 2e-31
Identities = 73/200 (36%), Positives = 94/200 (46%), Gaps = 48/200 (24%)
Query: 3 GKACYICGKLGHLASDCD-------------SEKLCYNCNKPGHVQSECTVPKTVEFKQ- 48
G CY CG+LGH++ DC + CYNC GH +CT + +
Sbjct: 99 GSGCYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGA 158
Query: 49 -------CYNCGETGHVKTECTVQK----------------CYNCDGFGHISRECDQPKR 85
CY CG+ GHV +CT + CY C GH +R+C Q K
Sbjct: 159 TKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQ-KV 217
Query: 86 FRNNERSGPKVS--CYKCGGPNHIAKDC-LKSEPT--CYNCGQAGHLSKDCQ-----NGE 135
N RSG S CY CGG HIA+DC K +P+ CY CG +GHL++DC G
Sbjct: 218 AAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGSGGGG 277
Query: 136 NEKVCYNCNGVGHIAKDCSS 155
N+ CY C GH A++CSS
Sbjct: 278 NDNACYKCGKEGHFARECSS 297
Score = 64.3 bits (155), Expect = 6e-11
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 66 KCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC------------LK 113
K N G S + + R R G CY CG HI+KDC +
Sbjct: 70 KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129
Query: 114 SEPTCYNCGQAGHLSKDCQNGEN----------EKVCYNCNGVGHIAKDCS 154
CYNCG GH ++DC + N CY C VGH+A+DC+
Sbjct: 130 GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCT 180
>At2g17870 [J] KOG3070 Predicted RNA-binding protein containing PIN domain and
invovled in translation or RNA processing
Length = 299
Score = 108 bits (269), Expect = 4e-24
Identities = 64/211 (30%), Positives = 83/211 (39%), Gaps = 60/211 (28%)
Query: 2 SGKACYICGKLGHLASDCD-----------------SEKLCYNCNKPGHVQSECTVPKTV 44
SG C+ CG++GH+A DCD E CY C GH +C
Sbjct: 90 SGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGG 149
Query: 45 EF-------KQCYNCGETGHVKTECT-----------------VQKCYNCDGFGHISREC 80
+ CY+CGE GH+ +C CY C G GH +R+C
Sbjct: 150 NSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDC 209
Query: 81 DQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEPT--------CYNCGQAGHLSKDCQ 132
Q G +CY CGG HIAK C P+ CY CG GHL++DC
Sbjct: 210 RQN---GGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCD 266
Query: 133 --------NGENEKVCYNCNGVGHIAKDCSS 155
G C+ C GH A++C+S
Sbjct: 267 RRGSGSSGGGGGSNKCFICGKEGHFARECTS 297
Score = 60.8 bits (146), Expect = 7e-10
Identities = 30/92 (32%), Positives = 40/92 (42%), Gaps = 25/92 (27%)
Query: 87 RNNERSGPKVSCYKCGGPNHIAKDC----------------LKSEPTCYNCGQAGHLSKD 130
+ N G +C+ CG H+AKDC E CY CG GH ++D
Sbjct: 83 KENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARD 142
Query: 131 CQ---------NGENEKVCYNCNGVGHIAKDC 153
C+ G + CY+C VGH+AKDC
Sbjct: 143 CRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC 174
>Hs20552876 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 166
Score = 104 bits (259), Expect = 5e-23
Identities = 57/157 (36%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 1 MSGKACYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKT 60
MS K + CG GH A C GH + T+ + CY CGE+G
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGG-AGGRRGGGHGRGSQCGSTTLSYT-CYCCGESGRNAK 58
Query: 61 ECTV--QKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC-LKSEPT 117
C + CYNC GHI+++C PKR R CY CG H+A+DC + E
Sbjct: 59 NCVLLGNICYNCGRSGHIAKDCKDPKRERRQH-------CYTCGRLGHLARDCDRQKEQK 111
Query: 118 CYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDCS 154
CY+CG+ GH+ KDC + CY C +GH+A +CS
Sbjct: 112 CYSCGKLGHIQKDCAQVK----CYRCGEIGHVAINCS 144
Score = 95.5 bits (236), Expect = 3e-20
Identities = 43/115 (37%), Positives = 59/115 (50%), Gaps = 17/115 (14%)
Query: 6 CYICGKLGHLASDCDS-EKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTEC-- 62
CY CG+ G A +C +CYNC + GH+ +C PK + CY CG GH+ +C
Sbjct: 47 CYCCGESGRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDR 106
Query: 63 -TVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEP 116
QKCY+C GHI ++C Q V CY+CG H+A +C K+ P
Sbjct: 107 QKEQKCYSCGKLGHIQKDCAQ-------------VKCYRCGEIGHVAINCSKARP 148
>At3g43590 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 551
Score = 97.8 bits (242), Expect = 5e-21
Identities = 58/190 (30%), Positives = 77/190 (40%), Gaps = 47/190 (24%)
Query: 4 KACYICGKLGHLASDCDSEKLCYNCNKPGHVQSEC--TVPKTVEFKQCYNCGETGHVKTE 61
K C+ICG L H A C CY C K GH +C + C CG+ GH
Sbjct: 189 KPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRCGDFGHDMIL 248
Query: 62 CTVQ---------KCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC- 111
C + +CY C FGH+ C +P N S VSCY+CG H C
Sbjct: 249 CKYEYSKEDLKDVQCYICKSFGHLC--CVEP----GNSLSW-AVSCYRCGQLGHSGLACG 301
Query: 112 -------------------LKSEPTCYNCGQAGHLSKDCQNG---------ENEKVCYNC 143
+ CY CG+ GH +++C N E++ +CY C
Sbjct: 302 RHYEESNENDSATPERLFNSREASECYRCGEEGHFARECPNSSSISTSHGRESQTLCYRC 361
Query: 144 NGVGHIAKDC 153
NG GH A++C
Sbjct: 362 NGSGHFAREC 371
Score = 67.4 bits (163), Expect = 7e-12
Identities = 43/145 (29%), Positives = 61/145 (41%), Gaps = 22/145 (15%)
Query: 25 CYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTV-QKCYNCDGFGHISRECDQP 83
CY+C + GH C P T K C+ CG H +C+ CY C GH +++C P
Sbjct: 168 CYSCGEQGHTSFNCPTP-TKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDC--P 224
Query: 84 KRFRNNERSGPKVSCYKCGGPNH--------IAKDCLKSEPTCYNCGQAGHLSKDCQNGE 135
+++N + C +CG H +K+ LK + CY C GHL C
Sbjct: 225 DKYKNGSKGAV---CLRCGDFGHDMILCKYEYSKEDLK-DVQCYICKSFGHLC--CVEPG 278
Query: 136 NEKV----CYNCNGVGHIAKDCSSY 156
N CY C +GH C +
Sbjct: 279 NSLSWAVSCYRCGQLGHSGLACGRH 303
Score = 64.3 bits (155), Expect = 6e-11
Identities = 46/204 (22%), Positives = 64/204 (30%), Gaps = 61/204 (29%)
Query: 3 GKACYICGKLGHLASDCDSE-------KLCYNCNKPGHVQSECTVPKTVEFKQ------- 48
G CYIC K GH A DC + +C C GH C + E +
Sbjct: 207 GHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYIC 266
Query: 49 --------------------CYNCGETGHVKTEC----------------------TVQK 66
CY CG+ GH C +
Sbjct: 267 KSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESNENDSATPERLFNSREASE 326
Query: 67 CYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGH 126
CY C GH +REC + + CY+C G H A++C S +
Sbjct: 327 CYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNSSQVSKRDRETST 386
Query: 127 LS-----KDCQNGENEKVCYNCNG 145
S K+ +N E++ + NG
Sbjct: 387 TSHKSRKKNKENSEHDSTPHESNG 410
Score = 57.0 bits (136), Expect = 1e-08
Identities = 35/112 (31%), Positives = 42/112 (37%), Gaps = 31/112 (27%)
Query: 41 PKTVEFKQCYNCGETGHVKTECTVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYK 100
P + CY+CGE GH S C P + R C+
Sbjct: 160 PPDAGWVSCYSCGEQGHT------------------SFNCPTPTKRRK--------PCFI 193
Query: 101 CGGPNHIAKDCLKSEPTCYNCGQAGHLSKDC----QNGENEKVCYNCNGVGH 148
CG H AK C K CY C + GH +KDC +NG VC C GH
Sbjct: 194 CGSLEHGAKQCSKGH-DCYICKKTGHRAKDCPDKYKNGSKGAVCLRCGDFGH 244
Score = 53.1 bits (126), Expect = 1e-07
Identities = 25/61 (40%), Positives = 30/61 (48%), Gaps = 6/61 (9%)
Query: 96 VSCYKCGGPNHIAKDC---LKSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKD 152
VSCY CG H + +C K C+ CG H +K C G + CY C GH AKD
Sbjct: 166 VSCYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHD---CYICKKTGHRAKD 222
Query: 153 C 153
C
Sbjct: 223 C 223
>7291506 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 124
Score = 97.1 bits (240), Expect = 9e-21
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 25 CYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTVQK---CYNCDGFGHISRECD 81
CY CN+ GH C E ++CY C GH+ +CT CY C+ GH R C
Sbjct: 16 CYKCNQFGHFARACPE----EAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCP 71
Query: 82 QPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDC 131
+ NER VSCYKC HI+K+C ++ TCY CG++GHL ++C
Sbjct: 72 EAV----NERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 117
Score = 85.9 bits (211), Expect = 2e-17
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 21/116 (18%)
Query: 47 KQCYNCGETGHVKTECT--VQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGP 104
++CY C + GH C ++CY C+G GHIS++C Q +CY+C
Sbjct: 14 EKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ----------ADNPTCYRCNKT 63
Query: 105 NHIAKDCLKSE----PT---CYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDC 153
H ++C ++ PT CY C + GH+SK+C E K CY C GH+ ++C
Sbjct: 64 GHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCP--ETSKTCYGCGKSGHLRREC 117
Score = 78.2 bits (191), Expect = 4e-15
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 24/116 (20%)
Query: 6 CYICGKLGHLASDCDSE-KLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTEC-- 62
CY C + GH A C E + CY CN GH+ +CT + CY C +TGH C
Sbjct: 16 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDCT---QADNPTCYRCNKTGHWVRNCPE 72
Query: 63 -------TVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC 111
T CY C+ GHIS+ C + + +CY CG H+ ++C
Sbjct: 73 AVNERGPTNVSCYKCNRTGHISKNCPETSK-----------TCYGCGKSGHLRREC 117
Score = 73.6 bits (179), Expect = 1e-13
Identities = 34/86 (39%), Positives = 43/86 (49%), Gaps = 11/86 (12%)
Query: 6 CYICGKLGHLASDCDS--EKLCYNCNKPGHVQSECTVPKTVEFK-----QCYNCGETGHV 58
CY C +GH++ DC CY CNK GH C P+ V + CY C TGH+
Sbjct: 36 CYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNC--PEAVNERGPTNVSCYKCNRTGHI 93
Query: 59 KTEC--TVQKCYNCDGFGHISRECDQ 82
C T + CY C GH+ RECD+
Sbjct: 94 SKNCPETSKTCYGCGKSGHLRRECDE 119
Score = 62.0 bits (149), Expect = 3e-10
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 87 RNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGV 146
RN E+ CYKC H A+ C + CY C GH+SKDC +N CY CN
Sbjct: 11 RNREK------CYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADN-PTCYRCNKT 63
Query: 147 GHIAKDC 153
GH ++C
Sbjct: 64 GHWVRNC 70
Score = 51.2 bits (121), Expect = 6e-07
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 113 KSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDCS 154
++ CY C Q GH ++ C E + CY CNG+GHI+KDC+
Sbjct: 11 RNREKCYKCNQFGHFARACP--EEAERCYRCNGIGHISKDCT 50
>CE21045 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 151
Score = 92.8 bits (229), Expect = 2e-19
Identities = 53/160 (33%), Positives = 73/160 (45%), Gaps = 38/160 (23%)
Query: 21 SEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTVQKCYNCDGFGHISREC 80
S++ CY C +PGH+ C ++ ++ G T CYNC GH SR+C
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGST-----------CYNCQETGHFSRDC 50
Query: 81 DQPKRFRNNER---SGPKVSCYKCGGPNHIAKDC--LKSE------------------PT 117
PK + G SCY CGG H ++DC +SE
Sbjct: 51 --PKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQK 108
Query: 118 CYNCGQAGHLSKDC--QNGENEKVCYNCNGVGHIAKDCSS 155
CYNCG++GH+S++C EK CY C GHI++DC S
Sbjct: 109 CYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPS 148
Score = 74.3 bits (181), Expect = 6e-14
Identities = 44/153 (28%), Positives = 62/153 (39%), Gaps = 49/153 (32%)
Query: 1 MSGKACYICGKLGHLASDCDSEK------------LCYNCNKPGHVQSECTVPKTVEFKQ 48
MS + CY C + GH++ +C + + CYNC + GH +C + ++
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQR 60
Query: 49 --------CYNCGETGHVKTECTV----------------------QKCYNCDGFGHISR 78
CYNCG GH +C QKCYNC GHISR
Sbjct: 61 GGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISR 120
Query: 79 ECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC 111
EC + S + CY+C HI++DC
Sbjct: 121 ECTE-------SGSAEEKRCYQCQETGHISRDC 146
Score = 66.2 bits (160), Expect = 2e-11
Identities = 30/84 (35%), Positives = 39/84 (45%), Gaps = 21/84 (25%)
Query: 3 GKACYICGKLGHLASDCDSEKL---------------------CYNCNKPGHVQSECTVP 41
G +CY CG GH + DC S + CYNC + GH+ ECT
Sbjct: 66 GGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTES 125
Query: 42 KTVEFKQCYNCGETGHVKTECTVQ 65
+ E K+CY C ETGH+ +C Q
Sbjct: 126 GSAEEKRCYQCQETGHISRDCPSQ 149
>CE29052 [A] KOG0335 ATP-dependent RNA helicase
Length = 1156
Score = 87.4 bits (215), Expect = 7e-18
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 20/117 (17%)
Query: 49 CYNCGETGHVKTECTVQK-----CYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGG 103
C+NCGE GH+ EC K C NC+ GH + +CDQP+ P+ C CG
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRV--------PRGPCRNCGI 623
Query: 104 PNHIAKDCLKSEPT---CYNCGQAGHLSKDCQNG----ENEKVCYNCNGVGHIAKDC 153
H A DC + + C NCGQ GH +KDCQN E + C C GH +C
Sbjct: 624 EGHFAVDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 84.3 bits (207), Expect = 6e-17
Identities = 43/118 (36%), Positives = 57/118 (47%), Gaps = 20/118 (16%)
Query: 25 CYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTVQK-----CYNCDGFGHISRE 79
C+NC + GH+ EC PK F C NC + GH ++C + C NC GH + +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRF-PCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVD 630
Query: 80 CDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC----LKSEPT--CYNCGQAGHLSKDC 131
CDQPK P+ C CG H AKDC ++ EPT C C + GH +C
Sbjct: 631 CDQPK--------VPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
>CE09012 [A] KOG0335 ATP-dependent RNA helicase
Length = 974
Score = 80.1 bits (196), Expect = 1e-15
Identities = 46/141 (32%), Positives = 64/141 (44%), Gaps = 30/141 (21%)
Query: 25 CYNCNKPGHVQSECTVPKTV-EFKQCYNCGETGHVKTECTVQK--------------CYN 69
C+NC +PGH ++C PK E + CYNC + GH +C ++ N
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGN 432
Query: 70 CDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSK 129
GFG + E F NNE GP + C+ C G H + +C + C+NCG+ GH S
Sbjct: 433 DGGFGGGNAE-----GFGNNEERGP-MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSN 486
Query: 130 DCQN---------GENEKVCY 141
+C N GE K Y
Sbjct: 487 ECPNPAKPREGAEGEGPKATY 507
Score = 62.8 bits (151), Expect = 2e-10
Identities = 55/217 (25%), Positives = 78/217 (35%), Gaps = 76/217 (35%)
Query: 6 CYICGKLGHLASDCDSEK------LCYNCNKPGHVQSECTVP-KTVEFKQCYNCGETGH- 57
C+ C + GH ++DC K +CYNC +PGH +C K E + + G +G
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFG 318
Query: 58 ----------------VKTECTVQKCYNCDGFGHISRECD-----QPKRFRNNERSGPKV 96
+ + + GFG S Q + RNN
Sbjct: 319 GGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN------- 371
Query: 97 SCYKCGGPNHIAKDC----LKSEP-TCYNCGQAGHLSKDCQN------------------ 133
+C+ C P H + DC + EP CYNC Q GH S+DC
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGG 431
Query: 134 -------------GENEK----VCYNCNGVGHIAKDC 153
G NE+ C+NC G GH + +C
Sbjct: 432 NDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAEC 468
>CE25121 [A] KOG0335 ATP-dependent RNA helicase
Length = 763
Score = 77.8 bits (190), Expect = 6e-15
Identities = 49/160 (30%), Positives = 68/160 (41%), Gaps = 38/160 (23%)
Query: 10 GKLGHLASDCDSEKLCYNCNKPGHVQSECTVP-KTVEFKQCYNCGETGHVKTECTVQKCY 68
G+ GH + ++ C+NC +PGH S+C P K E + CYNC + GH ECT ++
Sbjct: 147 GEGGHGGGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 69 N------------------CDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKD 110
DGFG F E GP + C+ C G H + +
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGG-------FGGGEERGP-MKCFNCKGEGHRSAE 256
Query: 111 CLKSEPTCYNCGQAGHLSKDCQN---------GENEKVCY 141
C + C+NCG+ GH S +C N GE K Y
Sbjct: 257 CPEPPRGCFNCGEQGHRSNECPNPAKPREGVEGEGPKATY 296
Score = 52.0 bits (123), Expect = 3e-07
Identities = 35/118 (29%), Positives = 51/118 (42%), Gaps = 24/118 (20%)
Query: 53 GETGHVKTECTVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCL 112
GE GH E C+NC GH S +C +P++ R P+V CY C P H +++C
Sbjct: 147 GEGGHGGGERN-NNCFNCQQPGHRSSDCPEPRKERE-----PRV-CYNCQQPGHTSRECT 199
Query: 113 KS-EPTCYNCGQAGHLSKDCQNGENEKV----------------CYNCNGVGHIAKDC 153
+ +P G G + NG N+ C+NC G GH + +C
Sbjct: 200 EERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAEC 257
>At5g52380 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 268
Score = 74.7 bits (182), Expect = 5e-14
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 3 GKACYICGKLGHLASDC------DSEKLCYNCNKPGHVQSECTVP--KTVEFKQCYNCGE 54
G+ C+IC H+A C + K+C C + GH C ++ E K CYNCG+
Sbjct: 73 GEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGD 132
Query: 55 TGHVKTEC---------TVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYK-CGGP 104
TGH + C C+ C G GHIS+ C + N P C K CG
Sbjct: 133 TGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPE-----NKHGIYPMGGCCKVCGSV 187
Query: 105 NHIAKDC 111
H+ KDC
Sbjct: 188 AHLVKDC 194
Score = 53.9 bits (128), Expect = 9e-08
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 67 CYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKS------EPTCYN 120
C+ C HI++ C + + N+ C +C H K+C + + CYN
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNK------ICLQCRRRGHSLKNCPEKNNESSEKKLCYN 129
Query: 121 CGQAGHLSKDC-----QNGENEKVCYNCNGVGHIAKDC 153
CG GH C G C+ C G GHI+K+C
Sbjct: 130 CGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNC 167
Score = 48.9 bits (115), Expect = 3e-06
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 81 DQPKRFRNNERSGPKV-------SCYKCGGPNHIAKDCL-KSE----PTCYNCGQAGHLS 128
D+P+R ++ R +V C+ C HIAK C KSE C C + GH
Sbjct: 52 DRPQRTGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSL 111
Query: 129 KDCQNGENE----KVCYNCNGVGHIAKDC 153
K+C NE K+CYNC GH C
Sbjct: 112 KNCPEKNNESSEKKLCYNCGDTGHSLSHC 140
>At3g42860 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 372
Score = 73.9 bits (180), Expect = 8e-14
Identities = 42/131 (32%), Positives = 56/131 (42%), Gaps = 38/131 (29%)
Query: 25 CYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTVQKCYNCDGFGHISRECD--- 81
CY C K GH +CTV +TG VK+ C+ C GH SR+C
Sbjct: 239 CYKCGKEGHWARDCTVQS-----------DTGPVKSTSAAGDCFKCGKPGHWSRDCTAQS 287
Query: 82 -----QPKRFRNNERSGPKVSCYKCGGPNHIAKDCL----------------KSEPTCYN 120
+P + +++ SG CYKCG H ++DC S CY
Sbjct: 288 GNPKYEPGQMKSSSSSG---ECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGDCYK 344
Query: 121 CGQAGHLSKDC 131
CG+AGH S+DC
Sbjct: 345 CGKAGHWSRDC 355
Score = 70.9 bits (172), Expect = 7e-13
Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 31/143 (21%)
Query: 2 SGKACYICGKLGHLASDCDSEKL------------CYNCNKPGHVQSECTV----PKTVE 45
+G CY CGK GH A DC + C+ C KPGH +CT PK
Sbjct: 235 TGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSGNPKY-- 292
Query: 46 FKQCYNCGETGHVKTECTVQKCYNCDGFGHISREC---DQPKRFRNNERSGPKVS--CYK 100
E G +K+ + +CY C GH SR+C ++F++ + + CYK
Sbjct: 293 --------EPGQMKSSSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGDCYK 344
Query: 101 CGGPNHIAKDCLKSEPTCYNCGQ 123
CG H ++DC T G+
Sbjct: 345 CGKAGHWSRDCTSPAQTTNTPGK 367
>At5g36240 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 254
Score = 68.9 bits (167), Expect = 3e-12
Identities = 49/175 (28%), Positives = 63/175 (36%), Gaps = 46/175 (26%)
Query: 6 CYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTEC--- 62
CY+C LGHL C +PGH QS CY CG+ GH C
Sbjct: 55 CYVCNSLGHLC-----------CIEPGHTQSWTV--------SCYRCGQLGHTGLACGRH 95
Query: 63 ----TVQKCYNCDGFGHISRECDQ------PKRFRNNERSGPKVSCYKCGG------PNH 106
C+ C GH +C P+ +E GP S + H
Sbjct: 96 YDDSVSPSCFICGREGHFEHQCHNSFSVCFPEDSSEDECQGPDSSSVRFQENTREEEEGH 155
Query: 107 IAKDCLKSEPTCYN--CGQAGHLS-----KDCQNG-ENEKVCYNCNGVGHIAKDC 153
C S C+ + G +S K G E ++CY C G GHIA+DC
Sbjct: 156 FEHQCPDSSSVCFQEISREEGFISLNSSSKSTSKGRETRRLCYECKGKGHIARDC 210
Score = 56.6 bits (135), Expect = 1e-08
Identities = 34/111 (30%), Positives = 46/111 (40%), Gaps = 23/111 (20%)
Query: 45 EFKQCYNCGETGHVKTECTVQ---------KCYNCDGFGHISRECDQPKRFRNNERSGPK 95
E + C CG GH T C + KCY C+ GH+ C +P
Sbjct: 24 EAEVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLC--CIEP-----GHTQSWT 76
Query: 96 VSCYKCGGPNHIAKDCLKS-----EPTCYNCGQAGHLSKDCQNGENEKVCY 141
VSCY+CG H C + P+C+ CG+ GH C N + VC+
Sbjct: 77 VSCYRCGQLGHTGLACGRHYDDSVSPSCFICGREGHFEHQCHN--SFSVCF 125
Score = 48.1 bits (113), Expect = 5e-06
Identities = 33/119 (27%), Positives = 53/119 (43%), Gaps = 17/119 (14%)
Query: 5 ACYICGKLGHLASDC-DSEKLCYNCNKPGHVQSECTVP--KTVEFKQCYNCGETGHVKTE 61
+C+ICG+ GH C +S +C+ + + EC P +V F++ E GH + +
Sbjct: 103 SCFICGREGHFEHQCHNSFSVCFPEDSS---EDECQGPDSSSVRFQENTREEEEGHFEHQ 159
Query: 62 CT------VQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKS 114
C Q+ +GF ++ + R R CY+C G HIA+DC S
Sbjct: 160 CPDSSSVCFQEISREEGFISLNSSSKSTSKGRETRRL-----CYECKGKGHIARDCPNS 213
>SPBP35G2.08c [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 313
Score = 63.2 bits (152), Expect = 1e-10
Identities = 40/143 (27%), Positives = 56/143 (38%), Gaps = 19/143 (13%)
Query: 14 HLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETG-HVKTECT-VQKCYNCD 71
+ SD +C+NC GH+ +C P + C CG H+ C +KC NC
Sbjct: 78 YFGSDPSESIVCHNCKGNGHISKDC--PHVL----CTTCGAIDDHISVRCPWTKKCMNCG 131
Query: 72 GFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDC 131
GHI+ C +P++ GP+V C C H + C P +
Sbjct: 132 LLGHIAARCSEPRK------RGPRV-CRTCHTDTHTSSTC----PLIWRYYVEKEHPVRI 180
Query: 132 QNGENEKVCYNCNGVGHIAKDCS 154
E K CYNC H DC+
Sbjct: 181 DVSEVRKFCYNCASDEHFGDDCT 203
Score = 50.8 bits (120), Expect = 7e-07
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 20/120 (16%)
Query: 6 CYICGKLGHLASDCDSEKLCYNCNK-PGHVQSECTVPKTVEFKQCYNCGETGHVKTECTV 64
C+ C GH++ DC LC C H+ C P T K+C NCG GH+ C+
Sbjct: 89 CHNCKGNGHISKDC-PHVLCTTCGAIDDHISVRC--PWT---KKCMNCGLLGHIAARCSE 142
Query: 65 QK------CYNCDGFGHISRECDQPKRFRNNERSGPKVS-------CYKCGGPNHIAKDC 111
+ C C H S C R+ + ++ CY C H DC
Sbjct: 143 PRKRGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSEVRKFCYNCASDEHFGDDC 202
>Hs14150027 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 271
Score = 63.2 bits (152), Expect = 1e-10
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 24/109 (22%)
Query: 24 LCYNCNKPGHVQSECTVPKTVEFKQ-----CYNCGETGHVKTECTVQ-----------KC 67
+C++C KPGH ++C P +E + CY CG T H T+C + KC
Sbjct: 129 VCFHCRKPGHGIADC--PAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKC 186
Query: 68 YNCDGFGHISREC-DQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSE 115
+ C GH+SR C D PK + C CG H+ KDC +S+
Sbjct: 187 FVCGEMGHLSRSCPDNPKGLYADGG-----GCKLCGSVEHLKKDCPESQ 230
Score = 49.3 bits (116), Expect = 2e-06
Identities = 31/101 (30%), Positives = 43/101 (41%), Gaps = 18/101 (17%)
Query: 67 CYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC-LKSEPT-------- 117
C++C GH +C P N + G + CY+CG H C K +P
Sbjct: 130 CFHCRKPGHGIADC--PAALENQDM-GTGI-CYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 118 CYNCGQAGHLSKDCQNGENEKV-----CYNCNGVGHIAKDC 153
C+ CG+ GHLS+ C + C C V H+ KDC
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
>SPAC683.02c [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 218
Score = 59.7 bits (143), Expect = 2e-09
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 4 KACYICGKLGHLASDC----DSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVK 59
K C+ C + GH+ DC D+ +C+ C H + C+ ++F +C+ C E GH+
Sbjct: 77 KFCFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAKCFICHENGHLS 136
Query: 60 TECTVQK---------CYNCDGFGHISRECDQ 82
+C C C H++++CDQ
Sbjct: 137 GQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQ 168
Score = 58.9 bits (141), Expect = 3e-09
Identities = 31/97 (31%), Positives = 46/97 (46%), Gaps = 13/97 (13%)
Query: 22 EKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTVQ------KCYNCDGFGH 75
+K C+ C + GH+ +C K C+ CG H C+ + KC+ C GH
Sbjct: 76 DKFCFACRQQGHIVQDCPEAKD-NVSICFRCGSKEHSLNACSKKGPLKFAKCFICHENGH 134
Query: 76 ISRECDQPKRFRNNERSGPKVSCYK-CGGPNHIAKDC 111
+S +C+Q N + PK C K C +H+AKDC
Sbjct: 135 LSGQCEQ-----NPKGLYPKGGCCKFCSSVHHLAKDC 166
Score = 54.3 bits (129), Expect = 7e-08
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 67 CYNCDGFGHISRECDQPKRFRNNERSGPKVS-CYKCGGPNHIAKDCLKSEPT----CYNC 121
C+ C GHI ++C + K VS C++CG H C K P C+ C
Sbjct: 79 CFACRQQGHIVQDCPEAK---------DNVSICFRCGSKEHSLNACSKKGPLKFAKCFIC 129
Query: 122 GQAGHLSKDCQNGENEK-------VCYNCNGVGHIAKDC 153
+ GHLS C+ +N K C C+ V H+AKDC
Sbjct: 130 HENGHLSGQCE--QNPKGLYPKGGCCKFCSSVHHLAKDC 166
>YDL175c [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 344
Score = 57.4 bits (137), Expect = 8e-09
Identities = 41/142 (28%), Positives = 54/142 (37%), Gaps = 27/142 (19%)
Query: 6 CYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTVQ 65
C C + GHL DC Y H C PK + QC C E GH +++C +
Sbjct: 63 CNNCSQRGHLKKDCPHIICSYCGATDDHYSRHC--PKAI---QCSKCDEVGHYRSQCPHK 117
Query: 66 ----KCYNCDGFGHISRECDQPKR----FRNNERSGPKVSCYKCGGPNHIAKDCLKSEPT 117
+C C H C R +NE++ PKV P H
Sbjct: 118 WKKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVL------PFHTIY-------- 163
Query: 118 CYNCGQAGHLSKDCQNGENEKV 139
CYNCG GH DC+ + +V
Sbjct: 164 CYNCGGKGHFGDDCKEKRSSRV 185
Score = 53.9 bits (128), Expect = 9e-08
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 30/137 (21%)
Query: 25 CYNCNKPGHVQSECTVPKTVEFKQCYNCGETG-HVKTECTVQ-KCYNCDGFGHISRECDQ 82
C NC++ GH++ +C P + C CG T H C +C CD GH +C
Sbjct: 63 CNNCSQRGHLKKDC--PHII----CSYCGATDDHYSRHCPKAIQCSKCDEVGHYRSQC-- 114
Query: 83 PKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDCQNGENEKV--- 139
P +++ KV C C H S+ C + +A L D + + + +
Sbjct: 115 PHKWK-------KVQCTLCKSKKH-------SKERCPSIWRAYILVDDNEKAKPKVLPFH 160
Query: 140 ---CYNCNGVGHIAKDC 153
CYNC G GH DC
Sbjct: 161 TIYCYNCGGKGHFGDDC 177
>CE27916 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 384
Score = 55.5 bits (132), Expect = 3e-08
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 56 GHVKTECTVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSE 115
G + T C++C GH +C PKR N S V C+KCG H +C K
Sbjct: 220 GRQDQKITGSACFHCREPGHRLADC--PKR---NSSSSDGV-CFKCGSMEHSIHECKKKG 273
Query: 116 ------PTCYNCGQAGHLSKDCQNGEN-----EKVCYNCNGVGHIAKDC 153
TC+ C Q GH+S+DC N C C H+ +DC
Sbjct: 274 VKGFPYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDC 322
Score = 49.3 bits (116), Expect = 2e-06
Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 30/155 (19%)
Query: 1 MSGKACYICGKLGHLASDC------DSEKLCYNCNKPGHVQSECTVP--KTVEFKQCYNC 52
++G AC+ C + GH +DC S+ +C+ C H EC K + C+ C
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVC 285
Query: 53 GETGHVKTECTVQK---------CYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGG 103
+ GH+ +C C C H+ R+C P+++ K GG
Sbjct: 286 KQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDC-------------PELAAQKAGG 332
Query: 104 PNHIAKDCLKSEPTCYNCGQAGHLSKDCQNGENEK 138
+ K + +N A +N EK
Sbjct: 333 AHFEKKHFTARAASNWNTQSADADYDPTENSTQEK 367
>YIL079c [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 360
Score = 54.7 bits (130), Expect = 5e-08
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 36/141 (25%)
Query: 20 DSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCG-ETGHVKTECTVQK-CYNCDGFGHIS 77
++E C NC++ GH++ C P + C CG H C C NC+ GH
Sbjct: 71 EAEPKCNNCSQRGHLKRNC--PHVI----CTYCGFMDDHYSQHCPKAIICTNCNANGHYK 124
Query: 78 RECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC--------LKSEPT-----------C 118
+C P +++ KV C C H + C LK++ C
Sbjct: 125 SQC--PHKWK-------KVFCTLCNSKRHSRERCPSIWRSYLLKTKDANQGDFDFQTVFC 175
Query: 119 YNCGQAGHLSKDCQNGENEKV 139
YNCG AGH DC + +V
Sbjct: 176 YNCGNAGHFGDDCAERRSSRV 196
>CE29051 [A] KOG0335 ATP-dependent RNA helicase
Length = 1016
Score = 52.8 bits (125), Expect = 2e-07
Identities = 27/74 (36%), Positives = 35/74 (46%), Gaps = 14/74 (18%)
Query: 64 VQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC----LKSEPT-- 117
+ C NC GH + +CDQPK P+ C CG H AKDC ++ EPT
Sbjct: 578 ISPCRNCGIEGHFAVDCDQPK--------VPRGPCRNCGQEGHFAKDCQNERVRMEPTEP 629
Query: 118 CYNCGQAGHLSKDC 131
C C + GH +C
Sbjct: 630 CRRCAEEGHWGYEC 643
>Hs22045627_2 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 356
Score = 52.0 bits (123), Expect = 3e-07
Identities = 31/136 (22%), Positives = 52/136 (37%), Gaps = 34/136 (25%)
Query: 24 LCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECTV------------------- 64
+C NC+K GH+ C +P+ V ++C+ C GH+ C
Sbjct: 55 ICRNCDKRGHLSKNCPLPRKV--RRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFR 112
Query: 65 ----QKCYNCDGFGHISRECDQP-KRFRNNERSGPKVSCYKCGGPNHIAKDCLKSEPTCY 119
++C C GH + C + +++ + GP P+ +A CY
Sbjct: 113 HSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAY--------CY 164
Query: 120 NCGQAGHLSKDCQNGE 135
+C Q GH +C E
Sbjct: 165 HCAQKGHYGHECPERE 180
Score = 51.2 bits (121), Expect = 6e-07
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 4 KACYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTECT 63
+ C++C + GHL C + LC C P + C + + KQC C GH CT
Sbjct: 76 RRCFLCSRRGHLLYSCPA-PLCEYCPVPKMLDHSCLFRHSWD-KQCDRCHMLGHYTDACT 133
Query: 64 -VQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKSE 115
+ + Y H++ + PK+ + R CY C H +C + E
Sbjct: 134 EIWRQY------HLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHECPERE 180
>Hs14994312_2 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 115
Score = 48.5 bits (114), Expect = 4e-06
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 93 GPKVSCYKCGGPNHIAKDCLKSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKD 152
G +C+KCG H++ C ++ C+ CG+ GHLS C+ G VC C GH
Sbjct: 42 GQPKTCFKCGSRTHMSGSC--TQDRCFRCGEEGHLSPYCRKG---IVCNLCGKRGHAFAQ 96
Query: 153 C 153
C
Sbjct: 97 C 97
>ECU11g0650 [O] KOG4400 E3 ubiquitin ligase interacting with arginine
methyltransferase
Length = 220
Score = 48.1 bits (113), Expect = 5e-06
Identities = 31/126 (24%), Positives = 52/126 (40%), Gaps = 20/126 (15%)
Query: 5 ACYICGKLGHLASDC---DSEKLCYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTE 61
AC+ CG+ GH +C + +C C+ GH C ++ C CG GH +
Sbjct: 82 ACFRCGETGHGIRECPKAPGKDVCELCSWDGHRSLCC------PYRLCPRCGRCGHSPDD 135
Query: 62 C-------TVQKCYNCDGFGHISRECDQP-KRFRNNERSGPKV---SCYKCGGPNHIAKD 110
C + C C H + +C + KR++ N + + +C C H D
Sbjct: 136 CLEPESLDRSKMCEACPTGFHSTEDCPRTWKRYKLNRNTSKRTIYKACPICLSRKHFIGD 195
Query: 111 CLKSEP 116
C +++P
Sbjct: 196 CSENKP 201
>At3g53500 [A] KOG0107 Alternative splicing factor SRp20/9G8 (RRM superfamily)
Length = 302
Score = 48.1 bits (113), Expect = 5e-06
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 83 PKRFRNNERSGPKVS---CYKCGGPNHIAKDCLKSE--PTCYNCGQAGHLSKDCQNGENE 137
P+ R+N GP C+ CG H A+DC + CY CG+ GH+ ++C+N +
Sbjct: 101 PRGSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSP 160
Query: 138 K 138
K
Sbjct: 161 K 161
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,386,948
Number of Sequences: 60738
Number of extensions: 599825
Number of successful extensions: 3399
Number of sequences better than 1.0e-05: 26
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2713
Number of HSP's gapped (non-prelim): 178
length of query: 156
length of database: 30,389,216
effective HSP length: 97
effective length of query: 59
effective length of database: 24,497,630
effective search space: 1445360170
effective search space used: 1445360170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)