ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII0812 good L KOG1508 Replication, recombination and repair DNA replication factor/protein phosphatase inhibitor SET/SPR-2
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII0812  274480  275244 255  
         (255 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNL246w [L] KOG1508 DNA replication factor/protein phosphatase i...   257   1e-68
SPBC36B7.08c [L] KOG1508 DNA replication factor/protein phosphat...    70   3e-12
7299983 [L] KOG1508 DNA replication factor/protein phosphatase i...    52   6e-07

>YNL246w [L] KOG1508 DNA replication factor/protein phosphatase inhibitor
           SET/SPR-2
          Length = 264

 Score =  257 bits (656), Expect = 1e-68
 Identities = 124/210 (59%), Positives = 155/210 (73%), Gaps = 15/210 (7%)

Query: 5   ENEAELYKIKLMAPVFDKRDKLIEKIPFFWNIALTQHSDFSNYVRASDFKYIEAIKKIVV 64
           E E ELY++  M PV++KRD  I++I  FW I L+QH  F+NY+RASDFKYI+ I KI V
Sbjct: 29  EREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKV 88

Query: 65  KPLALEDEECTARDFQITIEFNEIKGDLKAQHVSKVFKIEKDVSKILIKKNRTAEDDELD 124
           + LALE E    RDF IT  F+ I+GD K Q V+KVF+I+K             +DD+ D
Sbjct: 89  EWLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIKK------------GKDDQED 136

Query: 125 ADLGFLTSEPVNIDWPKSYDNINPELISDKSTPEGKKNYRTGMKTFFAWFKWTGLKPGKE 184
              G LTSEPV I+WP+SYD+INP+LI DK +PEGKK YR GMKT F WF+WTGLKPGKE
Sbjct: 137 ---GILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGKE 193

Query: 185 FPNGDALANLFNEELYPYCVKYYTEAQRDV 214
           FP+GD+LA+LF+EE+YP+CVKYY EAQRD+
Sbjct: 194 FPHGDSLASLFSEEIYPFCVKYYAEAQRDL 223


>SPBC36B7.08c [L] KOG1508 DNA replication factor/protein phosphatase inhibitor
           SET/SPR-2
          Length = 244

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 60/216 (27%), Positives = 96/216 (43%), Gaps = 38/216 (17%)

Query: 4   AENEAELYKIKLMAPVFDKRDKLIEKIPFFWNIALTQHSD-FSNYVRASDFKYIEAIKKI 62
           AE E    + +L  P+F++R  +++ I  FW + L    D  S Y+   D   +E ++ I
Sbjct: 20  AEIEILKKQNELFQPLFEQRRDILKTINNFWVVVLEAAGDEISQYITPEDSVLLEKLENI 79

Query: 63  VVKPLALEDEECTARDFQITIEF--NEIKGDLKAQHVSKVFKIEKDVSKILIKKNRTAED 120
            V+       E   RD +I++ F  NE   D     V +V           IK+ +  +D
Sbjct: 80  YVERF----NEKEPRDVRISLTFQPNEYLQDDNLTLVKEV----------RIKEEKAKDD 125

Query: 121 DELDADLGFLTSEPVNIDWPKSYDNINPELISDKSTPEGKKNYRTGMK---TFFAWFKWT 177
           + L+  +   TS+PV+I W                   GK  +R   K    FF +F+WT
Sbjct: 126 EGLEKKITKYTSQPVDIHW-----------------KPGKSLFRKNKKLPPNFFDYFQWT 168

Query: 178 GLKPGKEFPNGDALANLFNEELYPYCVKYYTEAQRD 213
           G +   +F +G  L     E+L+P  VKY+TEA  +
Sbjct: 169 GEEEDDDF-DGATLTIFLAEDLFPNAVKYFTEAMTE 203


>7299983 [L] KOG1508 DNA replication factor/protein phosphatase inhibitor
           SET/SPR-2
          Length = 269

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 32/195 (16%)

Query: 14  KLMAPVFDKRDKLIEKIPFFWNIALTQHSDFSNYVRASDFKYIEAIKKIVVKPLALEDEE 73
           KL  P ++KR +L+++IP FW  +   H   S  +   + + + A+ K     L +E+ E
Sbjct: 63  KLRKPCYEKRSELVKRIPNFWVTSFINHPQVSGILDEEEEECLHALNK-----LEVEEFE 117

Query: 74  CTARDFQITIEFNEIKGDLKAQHVSKVFKIEKDVSKILIKKNRTAEDDELDADLGFLTSE 133
                ++I   F+E          +KV   E  ++     +N          D    TS 
Sbjct: 118 DIKSGYRINFHFDE-----NPYFENKVLTKEFHLNSAAASEN---------GDWPASTST 163

Query: 134 PVNIDWPKSYDNINPELISDKSTPEGKKNYRTG-MKTFFAWFKWTGLKPGKEFPNGDALA 192
           P  I W K   N+   L+   + P G K  R    KTFF WF           P  D +A
Sbjct: 164 P--IKW-KEGKNLLKLLL---TKPYGNKKKRNSEYKTFFDWFS------DNTDPVNDEIA 211

Query: 193 NLFNEELYPYCVKYY 207
            L  ++L+P  ++YY
Sbjct: 212 ELIKDDLWPNPLQYY 226


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,084,983
Number of Sequences: 60738
Number of extensions: 584865
Number of successful extensions: 1518
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1511
Number of HSP's gapped (non-prelim): 3
length of query: 255
length of database: 30,389,216
effective HSP length: 104
effective length of query: 151
effective length of database: 24,072,464
effective search space: 3634942064
effective search space used: 3634942064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)