ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII0815  suspect: LH   S     KOG3869  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII0815  275942 275325 -206 
         (206 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNL245c [S] KOG3869 Uncharacterized conserved protein                  85   6e-17

>YNL245c [S] KOG3869 Uncharacterized conserved protein
          Length = 179

 Score = 85.1 bits (209), Expect = 6e-17
 Identities = 58/156 (37%), Positives = 74/156 (47%), Gaps = 15/156 (9%)

Query: 3   DLNLLKSWNPKLVKNRKKVWEAQQQLVXXXXXXXXXXXXXXXXXXLDRY---SSLIRDED 59
           DLNLLKSWNPKL+KNRKKVWE +Q L+                  L+     SS  + E 
Sbjct: 5   DLNLLKSWNPKLMKNRKKVWETEQDLITEQQKLNTRLKEIEKERELNELLNESSKDKPET 64

Query: 60  QKN--VKRKTGLEWMYDNTSTALTENVDYLLGKKEITDTLLDLSGXXXXXXXXXXXXXTI 117
            KN    +K+GLEWMY +   +  E  DYLLGKK++  ++L+                  
Sbjct: 65  LKNDLALKKSGLEWMYQDAKLS-DEKEDYLLGKKKLDSSILNQPATPPVRAATTISA--- 120

Query: 118 RKHYQGIEDVICSKTNHKNVDLSSDDPMAKFKAAKQ 153
                G    I S+   K   L  DDPM+KFK  KQ
Sbjct: 121 ----SGAATSISSQ--KKKSKLLKDDPMSKFKVTKQ 150


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.312    0.129    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,371,812
Number of Sequences: 60738
Number of extensions: 290614
Number of successful extensions: 561
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 557
Number of HSP's gapped (non-prelim): 1
length of query: 206
length of database: 30,389,216
effective HSP length: 101
effective length of query: 105
effective length of database: 24,254,678
effective search space: 2546741190
effective search space used: 2546741190
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)