ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII1167  suspect: LH   S     KOG4463  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII1167 415111 414278 -278 
         (278 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YOL073c [S] KOG4463 Uncharacterized conserved protein                 216   3e-56
SPAC1486.02c [S] KOG4463 Uncharacterized conserved protein             59   8e-09

>YOL073c [S] KOG4463 Uncharacterized conserved protein
          Length = 322

 Score =  216 bits (550), Expect = 3e-56
 Identities = 117/323 (36%), Positives = 169/323 (52%), Gaps = 52/323 (16%)

Query: 7   VGVEIPTGLVQFPITKILMICCVGVALTASLFNMKYLFLLQYDPFIVEYGQYWRYFTFQL 66
           + +E P GL   P+TK+ MI  + V L AS+ + K++FLLQYDPF+  Y QY+R   FQ 
Sbjct: 1   MSMEPPVGLTAMPVTKLAMITTLVVPLVASIASYKHIFLLQYDPFLQTYHQYYRLLIFQF 60

Query: 67  GSLNESDVAIMTLIWYQFRSLERLFGSRKYLNIVILSWAYTTVVIFLISNLLNKLL---P 123
            ++NESD  I+ LIWY FR LERL GS KYL +++LSWAYTT+ I+ ++ + N  +    
Sbjct: 61  CAINESDTVILALIWYLFRHLERLLGSHKYLTLIVLSWAYTTLGIWGLNLIWNAFIGQYK 120

Query: 124 GIWWDQYTNGPLPVILCLTHFYKQYTPRLYEFNIII----------NQPFLLHSNTIVWK 173
            + W+ ++ G LP++L L HFYK+YTP++YE+NI +          N       + + WK
Sbjct: 121 WLQWNNFSTGSLPIVLSLVHFYKEYTPQIYEWNIRLLGPRGGASSHNDNKREDKSAVEWK 180

Query: 174 LTDQFFIHGLLFLAMVNQGATGLVIGLISWICAILMDNGLLPGTDSFQLAPFKDSWNRSS 233
           + DQF ++GL+ L ++NQG  G++ G ISW+C I +D GLLPG D +++ PF   +    
Sbjct: 181 INDQFLLNGLILLLILNQGFAGILCGFISWMCGIFIDKGLLPGLDHWRI-PFVSYFISQG 239

Query: 234 STLNRPSAVMTNDMTSXXXXXXXXXXXXXXX----------------------------- 264
                  A+  N  T+                                            
Sbjct: 240 PPTRANVAIAANAATNTAAARATVEAATAATGNGNTGNSGPTSLPLRGSSTTPTNTSSAG 299

Query: 265 ---------XRTLGVQFLDTFRR 278
                     R LGVQFLDTFRR
Sbjct: 300 DDEPGADEPARPLGVQFLDTFRR 322


>SPAC1486.02c [S] KOG4463 Uncharacterized conserved protein
          Length = 372

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 24/203 (11%)

Query: 20  ITKILMICCVGVALTASLFNMKYLFLLQYDPFIVEYGQYWRYFTFQLGSLNESDVAIMTL 79
           ITK L++     ++ A +F +K  F + +   ++ + QYWR   +Q    N ++V     
Sbjct: 13  ITKFLLLTISTSSVVAGVFALKPFFHINFGLHLLSHYQYWRILLWQFIYWNSTEVFQALF 72

Query: 80  IWYQFRSLERLFGSRKYLN----IVILSWAYTTVVIFLISNLLNKLLPGIWWDQYTNGPL 135
           I YQ R +ERL GS ++ +    + IL    T +  FL S L   L      D    GP 
Sbjct: 73  IIYQARDVERLLGSHRFASFCVYMFILGMFVTPIFSFLYSLLFKNL------DYIQPGPT 126

Query: 136 PVILCLTHFYKQYTPRLYEFNIIINQPFLLHSNTIVWKLTDQF-FIHGLLFLAMVNQGAT 194
            +I  +          LY++  I+     +    I  K TD+F  +  ++ LA  +  +T
Sbjct: 127 FLIFAI----------LYQYYYIVPSTVFVRLFNI--KFTDKFQMVIPMIGLAFSHFPST 174

Query: 195 GLVIGLISWICAILMDNGLLPGT 217
             +   + W   +     LLPGT
Sbjct: 175 -FINAFLGWTMGMFYHLSLLPGT 196


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.328    0.143    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,692,363
Number of Sequences: 60738
Number of extensions: 647204
Number of successful extensions: 1510
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1506
Number of HSP's gapped (non-prelim): 3
length of query: 278
length of database: 30,389,216
effective HSP length: 105
effective length of query: 173
effective length of database: 24,011,726
effective search space: 4154028598
effective search space used: 4154028598
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)