ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1218 good M KOG4701 Cell wall/membrane/envelope biogenesis Chitinase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1218 433306 431654 -551
(551 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR286c [M] KOG4701 Chitinase 396 e-110
SPAPB1E7.04c [M] KOG4701 Chitinase 150 5e-36
At5g24090 [M] KOG4701 Chitinase 134 5e-31
>YLR286c [M] KOG4701 Chitinase
Length = 562
Score = 396 bits (1017), Expect = e-110
Identities = 191/293 (65%), Positives = 228/293 (77%), Gaps = 2/293 (0%)
Query: 17 TSAFDINAKDNVAVYWGQASAGTQESLGTYCASDNVDVVVLSFLYQFPDNLAIDFASACS 76
T AFD +A N+AVYWGQ SAGTQESL TYC S + D+ +LSFL QFP L ++FA+ACS
Sbjct: 18 TDAFDRSANTNIAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQFP-TLGLNFANACS 76
Query: 77 TTFDDGLLHCPSIAADIESCQAKGKKVFLSLGGAIGSYGFTDDSQAEEFATTLWNTFGEG 136
TF DGLLHC IA DIE+CQ+ GKKV LSLGGA GSY F+DDSQAE FA TLW+TFGEG
Sbjct: 77 DTFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEG 136
Query: 137 TADNVERPFDTAVVDGFDFDIENNNPTGYASLATKLRSLYAKGSKDYYLAAAPQCVYPDA 196
T + ERPFD+AVVDGFDFDIENNN GY++LATKLR+L+A+G+K YYL+AAPQC YPDA
Sbjct: 137 TGAS-ERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDA 195
Query: 197 SVGDALANADIDIAFVQFYNNYCNVDKQFNWDTWADFVENTSPNKDIKLYXXXXXXXXXX 256
SVGD L NADID AF+QFYNNYC+V QFNWDTW + + SPNK+IKL+
Sbjct: 196 SVGDLLENADIDFAFIQFYNNYCSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAA 255
Query: 257 XXXYISDLSLLKSTVQTIGENSHFGGIMLWDASQGFTNQVDGEPYVAQVKSIL 309
YISD SLL+ST+ I +S FGGI LWDASQ F+N+++GEPYV +K++L
Sbjct: 256 GSGYISDTSLLESTIADIASSSSFGGIALWDASQAFSNELNGEPYVEILKNLL 308
Score = 120 bits (300), Expect = 7e-27
Identities = 50/74 (67%), Positives = 64/74 (85%)
Query: 473 AVTRAKELNEQFVKGELNGKDSCSDGEISCTADGKIAICNYGAWVYTECAAGTTCFAYDS 532
A T AKELN Q+ G+LNGK +C++GEI+C+ADGK A+C++ AWVY ECA+GTTC+AYDS
Sbjct: 485 ARTLAKELNAQYAAGKLNGKSTCTEGEIACSADGKFAVCDHSAWVYMECASGTTCYAYDS 544
Query: 533 GDSVYTSCNFTYLK 546
GDSVYT CNF+YL+
Sbjct: 545 GDSVYTQCNFSYLE 558
>SPAPB1E7.04c [M] KOG4701 Chitinase
Length = 1236
Score = 150 bits (379), Expect = 5e-36
Identities = 93/313 (29%), Positives = 153/313 (48%), Gaps = 21/313 (6%)
Query: 19 AFDINAKDNVAV--YWGQASAGT-----QESLGTYCASDNVDVVVLSFLYQFP-DNLAI- 69
A +N + AV YWG AG Q+ L +YC + D ++LS + F D +
Sbjct: 17 ALSLNLTNQTAVLGYWGSNLAGKMGDRDQKRLSSYCQNTTYDAIILSSVIDFNVDGWPVY 76
Query: 70 DFASACST--TFDDG-LLHCPSIAADIESCQAKGKKVFLSLGGAIGSYGFTDDSQAEEFA 126
DF++ CS TF L CP I DI+ CQ G KV LS+GG G++ +D FA
Sbjct: 77 DFSNLCSDSDTFSGSELKKCPQIETDIQVCQENGIKVLLSIGGYNGNFSLNNDDDGTNFA 136
Query: 127 TTLWNTFGEGTADNVERPFDTAVVDGFDFDIENNNPTGYASLATKLRSLYAKG-SKDYYL 185
+WN FG G ++ RPF AVVDGFD ++ T Y++ A ++ +YA + YY+
Sbjct: 137 FQVWNIFGSG--EDSYRPFGKAVVDGFDLEVNKGTNTAYSAFAKRMLEIYASDPRRKYYI 194
Query: 186 AAAPQCVYPDASVGDALANADIDIAFVQFYNNY----CNVDKQFNWDTWADFVENTSPNK 241
+AAP C+ PD ++ A++ D + +N+ C+ + +D W ++ E+++ N
Sbjct: 195 SAAPTCMVPDHTLTKAISENSFDFLSIHTFNSSTGEGCSGSRNSTFDAWVEYAEDSAYNT 254
Query: 242 DIKLYXXXXXXXXXXXXXYISDLSLLKSTVQTIGENSHFGGIMLWDAS-QGFTNQVDGEP 300
+ L+ +IS +L + + ++ FGG+ +WD S + E
Sbjct: 255 NTSLF-YGVVGHQNGSNGFISPKNLTRDLLNYKANSTLFGGVTIWDTSLAAMSYDNSSET 313
Query: 301 YVAQVKSILEANT 313
+V + IL+ +
Sbjct: 314 FVEAIHKILDTKS 326
>At5g24090 [M] KOG4701 Chitinase
Length = 302
Score = 134 bits (336), Expect = 5e-31
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 22/283 (7%)
Query: 24 AKDNVAVYWGQASAGTQESLGTYCASDNVDVVVLSFLYQFPDNLA--IDFASACSTTFDD 81
++ +A+YWGQ G + +L CA+ V ++FL +F + ++ A C+ +
Sbjct: 28 SRGGIAIYWGQN--GNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANT 85
Query: 82 GLLHCPSIAADIESCQAKGKKVFLSLGGAIGSYGFTDDSQAEEFATTLWNTFGEGTADNV 141
C + ++ CQ++G KV LSLGG IG+Y A+ A LWN F G + +
Sbjct: 86 ----CTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSS- 140
Query: 142 ERPFDTAVVDGFDFDIENNNPTGYASLATKLRSLYAKGSKDYYLAAAPQCVYPDASVGDA 201
RP AV+DG DF+IE +P + LA L +G K YL APQC +PD +G A
Sbjct: 141 -RPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRK-IYLTGAPQCPFPDRLMGSA 198
Query: 202 LANADIDIAFVQFYNN----YCNVDKQFNWDTWADFVENTSPNKDIKLYXXXXXXXXXXX 257
L D ++QFYNN Y + + Q +D+W + + + K +
Sbjct: 199 LNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQ---KFFLGLPAAPEAAG 255
Query: 258 XXYISDLSLLKSTVQTIGENSHFGGIML----WDASQGFTNQV 296
YI L + T+ ++ +GG+ML WD G+++ +
Sbjct: 256 SGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,334,444
Number of Sequences: 60738
Number of extensions: 924930
Number of successful extensions: 1764
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1751
Number of HSP's gapped (non-prelim): 4
length of query: 551
length of database: 30,389,216
effective HSP length: 111
effective length of query: 440
effective length of database: 23,647,298
effective search space: 10404811120
effective search space used: 10404811120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)