ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1483 good R KOG3335 General function prediction only Predicted coiled-coil protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1483 522074 522547 158
(158 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.11 [R] KOG3335 Predicted coiled-coil protein 102 3e-22
At3g58150 [R] KOG3335 Predicted coiled-coil protein 66 2e-11
At1g28510 [R] KOG3335 Predicted coiled-coil protein 66 2e-11
7301068 [R] KOG3335 Predicted coiled-coil protein 60 2e-09
Hs13376717 [R] KOG3335 Predicted coiled-coil protein 54 1e-07
7301069 [R] KOG3335 Predicted coiled-coil protein 48 6e-06
>SPBC1703.11 [R] KOG3335 Predicted coiled-coil protein
Length = 218
Score = 102 bits (253), Expect = 3e-22
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Query: 1 MSAIALKLGALLVRQVTRPMANVLKRQAKEHAVFKEICIGLAQKMHVADVVLRSKLTPTK 60
MS++ALK+G+LLVR +++P+AN +K QAKEH F++ CI AQ MH A+ ++T
Sbjct: 1 MSSLALKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEF----RITGIN 56
Query: 61 FSKT------IRPLNDTKAVENGATLLSEXXXXXXXXXXXXWETLRQRQKELDRREQVTQ 114
+K+ +RPLND KAV+ GAT LSE +ET R R+KE +RR++V +
Sbjct: 57 RAKSGGANVRLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRARRKEKNRRDEVAE 116
Query: 115 DIAFLQSEIEELRSTTKTQSDQIKSCQSLKEELKLIQS 152
I LQ EI + + Q K L+ + I S
Sbjct: 117 AILGLQHEIVRINEIMEKQFVLQKKKNELQSSTEEIDS 154
>At3g58150 [R] KOG3335 Predicted coiled-coil protein
Length = 183
Score = 66.2 bits (160), Expect = 2e-11
Identities = 41/142 (28%), Positives = 70/142 (48%), Gaps = 3/142 (2%)
Query: 6 LKLGALLVRQVTRPMANVLKRQAKEHAVFKEICIGLAQKMHVADVVLRSKLTPTKFSKTI 65
LKLG L +R + +P+AN LK++A + F++ I +AQ H L+ + + I
Sbjct: 6 LKLGTLALRTICKPIANQLKKEAGVNPKFRQFIINIAQANHRFTTKLQRRASGRITDAVI 65
Query: 66 RPLNDTKAVENGATLLSEXXXXXXXXXXXXWETLRQRQKELDRREQVTQDIAFLQSEIEE 125
RPLN+ +AV+ A LL E +E R + E + E+ Q++A + + E+
Sbjct: 66 RPLNEERAVQAAADLLGELFAFTVAGAALVYEVQRNARGEAKKEEKRQQELAEFRRKHEK 125
Query: 126 LRSTTKTQSDQIKSCQSLKEEL 147
+ + + + C L EEL
Sbjct: 126 MENEIEEMKQR---CCLLHEEL 144
>At1g28510 [R] KOG3335 Predicted coiled-coil protein
Length = 171
Score = 65.9 bits (159), Expect = 2e-11
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 LKLGALLVRQVTRPMANVLKRQAKEHAVFKEICIGLAQKMHVADVVLRSKLTPTKFSKTI 65
+KLG L V+ +++P+A+ LK QAK H F++ I AQ+ H ++ ++ I
Sbjct: 6 MKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHATDVEI 65
Query: 66 RPLNDTKAVENGATLLSEXXXXXXXXXXXXWETLRQRQKELDRREQVTQDIAFLQSEIEE 125
RPL++ KAV+ L+ E +E R + E + E Q E+EE
Sbjct: 66 RPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKEEARKQ-------ELEE 118
Query: 126 LRSTTKTQSDQIKSCQSLKEELK 148
LR + Q+ +S EEL+
Sbjct: 119 LRIKDEELEKQVADLKSKLEELE 141
>7301068 [R] KOG3335 Predicted coiled-coil protein
Length = 255
Score = 59.7 bits (143), Expect = 2e-09
Identities = 43/144 (29%), Positives = 66/144 (44%), Gaps = 1/144 (0%)
Query: 5 ALKLGALLVRQVTRPMANVLKRQAKEHAVF-KEICIGLAQKMHVADVVLRSKLTPTKFSK 63
A KLG L ++QV++P+ANV+K AK F K IC+ AQ + +V +
Sbjct: 8 AAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYNWVEVKTKMWALNMGGRV 67
Query: 64 TIRPLNDTKAVENGATLLSEXXXXXXXXXXXXWETLRQRQKELDRREQVTQDIAFLQSEI 123
+ PLN+ A+E GA LL E +E RQ KE + E + L + +
Sbjct: 68 NVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFEYSRQTIKENKKNELAQSEKMELTNML 127
Query: 124 EELRSTTKTQSDQIKSCQSLKEEL 147
E+ + Q QI+ + +L
Sbjct: 128 TEMNFRLERQDAQIREMTRVLADL 151
>Hs13376717 [R] KOG3335 Predicted coiled-coil protein
Length = 179
Score = 53.5 bits (127), Expect = 1e-07
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 7 KLGALLVRQVTRPMANVLKRQAKEHAVFKE-ICIGLAQKMHVADVVLRSKLTPTKFSKT- 64
KL L +RQV++P+AN +K A+ FK IC+ AQ H V +R+K+ F T
Sbjct: 10 KLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHW--VEMRTKMRIMGFRGTV 67
Query: 65 IRPLNDTKAVENGATLLSEXXXXXXXXXXXXWETLR----QRQKELDRR---EQVTQDIA 117
I+PLN+ A E GA LL E E R QR KE ++R + ++
Sbjct: 68 IKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAWNALRDEVG 127
Query: 118 FLQSEIEELRSTTKTQSDQIKSCQSLKEELKLIQSKL 154
L +E L++ + Q + + L+ EL+ ++++L
Sbjct: 128 HLALALEALQAQVQAAPPQ-GALEELRTELQEVRAQL 163
>7301069 [R] KOG3335 Predicted coiled-coil protein
Length = 166
Score = 47.8 bits (112), Expect = 6e-06
Identities = 31/137 (22%), Positives = 61/137 (43%), Gaps = 1/137 (0%)
Query: 7 KLGALLVRQVTRPMANVLKRQAKEHAVFKEICIGLAQKM-HVADVVLRSKLTPTKFSKTI 65
KL L ++ +++P+ N++K+ AK++ FK + + ++ HV DV + + + I
Sbjct: 10 KLALLAIKHISKPIGNLIKQTAKKNKSFKTLVVAPPARLYHVIDVRSKMWMLGLGQPRLI 69
Query: 66 RPLNDTKAVENGATLLSEXXXXXXXXXXXXWETLRQRQKELDRREQVTQDIAFLQSEIEE 125
PL D ++ G +L E E RQ + + + E+ L+ I
Sbjct: 70 PPLTDAMTIQMGGDILGEMVIFIIGATLIVGEFKRQAKNDRLKHEKHKMHREKLEERIGN 129
Query: 126 LRSTTKTQSDQIKSCQS 142
L + Q+ +I +S
Sbjct: 130 LTNKVARQTKEINQLRS 146
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.127 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,956,743
Number of Sequences: 60738
Number of extensions: 222015
Number of successful extensions: 1334
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1326
Number of HSP's gapped (non-prelim): 7
length of query: 158
length of database: 30,389,216
effective HSP length: 97
effective length of query: 61
effective length of database: 24,497,630
effective search space: 1494355430
effective search space used: 1494355430
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)