ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1520 good S KOG4090 Function unknown Uncharacterized conserved protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1520 535919 535473 -149
(149 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR002w [S] KOG4090 Uncharacterized conserved protein 172 1e-43
Hs7705851 [S] KOG4090 Uncharacterized conserved protein 77 6e-15
SPAC6C3.02c [S] KOG4090 Uncharacterized conserved protein 72 3e-13
Hs17485016 [S] KOG4090 Uncharacterized conserved protein 70 8e-13
Hs20548057 [S] KOG4090 Uncharacterized conserved protein 69 2e-12
7293321 [S] KOG4090 Uncharacterized conserved protein 69 2e-12
Hs22049381 [S] KOG4090 Uncharacterized conserved protein 68 5e-12
CE01491 [S] KOG4090 Uncharacterized conserved protein 53 2e-07
>YMR002w [S] KOG4090 Uncharacterized conserved protein
Length = 156
Score = 172 bits (437), Expect = 1e-43
Identities = 97/156 (62%), Positives = 105/156 (67%), Gaps = 7/156 (4%)
Query: 1 MARSRGSARPVSRP---QTRSASTVXXXXXXXXXXX-XXYSHPPHT-AQPQQPGMFAQMA 55
MARSRGS+RP+SR QTRSAST+ YSHPP AQ +QPGMFAQMA
Sbjct: 1 MARSRGSSRPISRSRPTQTRSASTMAAPVHPQQQQQPNAYSHPPAAGAQTRQPGMFAQMA 60
Query: 56 STAAGVAVGSTIGHTLGAGITGMFSGSSSXXXXXXXXXXXXXXXXDTFQNQQ--ATHCDV 113
STAAGVAVGSTIGHTLGAGITGMFSGS S Q Q C++
Sbjct: 61 STAAGVAVGSTIGHTLGAGITGMFSGSGSDSAPVEQQQQNMANTSGQTQTDQQLGRTCEI 120
Query: 114 DARNFTRCLEDNGGNMQICDYYLQQLKACQEAARQY 149
DARNFTRCL++N GN QICDYYLQQLKACQEAARQY
Sbjct: 121 DARNFTRCLDENNGNFQICDYYLQQLKACQEAARQY 156
>Hs7705851 [S] KOG4090 Uncharacterized conserved protein
Length = 151
Score = 77.4 bits (189), Expect = 6e-15
Identities = 43/103 (41%), Positives = 59/103 (56%), Gaps = 3/103 (2%)
Query: 43 AQPQQPGMFAQMASTAAGVAVGSTIGHTLGAGITGMFSGSSSXXXXXXXXXXXXXXXXDT 102
A P+QPG+ AQMA+TAAGVAVGS +GHTLG ITG FSG S+
Sbjct: 48 AAPRQPGLMAQMATTAAGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQEPQGTQP 107
Query: 103 FQNQQATHCDVDARNFTRCLEDNGGNMQICDYYLQQLKACQEA 145
Q QQ C + + F C + N G++++C+ + + LK C+ A
Sbjct: 108 AQQQQP--CLYEIKQFLECAQ-NQGDIKLCEGFNEVLKQCRLA 147
>SPAC6C3.02c [S] KOG4090 Uncharacterized conserved protein
Length = 172
Score = 72.0 bits (175), Expect = 3e-13
Identities = 55/167 (32%), Positives = 66/167 (38%), Gaps = 26/167 (15%)
Query: 1 MARSRGSARPVSRPQ-TRSASTVXXXXXXXXXXXXXYSH----PPHTAQP--QQPGMFAQ 53
M R R +A P R RSAST S PP TA PG F
Sbjct: 1 MPRRRSAAPPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPPTAVQGGSSPGFFGN 60
Query: 54 MASTAAGVAVGSTIGHTLGAGITGMFSGSSSXXX-----------------XXXXXXXXX 96
+ STAAGV +GS IGHT+G+ ITG FSGS S
Sbjct: 61 LVSTAAGVGIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQSSYSNSVPEAAYGSAPPS 120
Query: 97 XXXXDTFQNQQATHCDVDARNFTRCLEDNGGNMQICDYYLQQLKACQ 143
+ C DA+ F C+ ++ C YYL+QLKACQ
Sbjct: 121 TFASSAISEEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165
>Hs17485016 [S] KOG4090 Uncharacterized conserved protein
Length = 142
Score = 70.5 bits (171), Expect = 8e-13
Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 5 RGSARPVSRPQTRSASTVXXXXXXXXXXXXXYSHPPHTAQPQ------QPGMFAQMASTA 58
RGS SRP +R A+ +HPP +A QPG+ AQMA+TA
Sbjct: 3 RGSRSAASRPASRPAAP----------SAHPPAHPPPSAAAPAPAPSGQPGLMAQMATTA 52
Query: 59 AGVAVGSTIGHTLGAGITGMFSGSSSXXXXXXXXXXXXXXXXDTFQNQQATHCDVDARNF 118
AGVAVGS +GH +G+ +TG FSG SS Q Q C + R F
Sbjct: 53 AGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQAPTPAAP---QPLQMGPCAYEIRQF 109
Query: 119 TRCLEDNGGNMQICDYYLQQLKACQ 143
C ++ +C+ + + LK C+
Sbjct: 110 LDC-STTQSDLSLCEGFSEALKQCK 133
>Hs20548057 [S] KOG4090 Uncharacterized conserved protein
Length = 278
Score = 69.3 bits (168), Expect = 2e-12
Identities = 43/118 (36%), Positives = 58/118 (48%), Gaps = 10/118 (8%)
Query: 37 SHPPHTAQPQQ-------PGMFAQMASTAAGVAVGSTIGHTLGAGITGMFSGSSSXXXXX 89
+ PP A P P + AQMA+TAAG AVGS +GHTLG ITG FSG S+
Sbjct: 162 AQPPAAAPPSAVGSPAAVPRLMAQMATTAAGAAVGSAVGHTLGHAITGGFSGGSNAEPAR 221
Query: 90 XXXXXXXXXXXDTFQNQQATHCDVDARNFTRCLEDNGGNMQICDYYLQQLKACQEAAR 147
Q QQ C + F C + N G++++C+ + + LK C+ A R
Sbjct: 222 PDITYQEPQGTQLAQQQQP--CFYEIEQFLECAQ-NHGDIKLCEGFNEVLKQCRLAKR 276
>7293321 [S] KOG4090 Uncharacterized conserved protein
Length = 170
Score = 68.9 bits (167), Expect = 2e-12
Identities = 36/107 (33%), Positives = 55/107 (50%), Gaps = 7/107 (6%)
Query: 45 PQQPGMFAQMASTAAGVAVGSTIGHTLGAGITGMFSGSSSXXXXXXXXXXXXXXXXDTFQ 104
PQQP MF QMA+TA GVAVGS IGHT+G G+T +FSGS +
Sbjct: 61 PQQPSMFQQMAATAGGVAVGSAIGHTVGHGLTSLFSGSGDKEAAAPAPAAAAPAPQQPYY 120
Query: 105 NQQAT------HCDVDARNFTRCLEDNGGNMQICDYYLQQLKACQEA 145
QQ C + + F +C + ++ +C+ + + L+ C+++
Sbjct: 121 AQQQQPNEPQGACAWELKQFIQCAQGQ-ADLTLCEGFNEALRQCKQS 166
>Hs22049381 [S] KOG4090 Uncharacterized conserved protein
Length = 377
Score = 67.8 bits (164), Expect = 5e-12
Identities = 35/88 (39%), Positives = 48/88 (53%), Gaps = 2/88 (2%)
Query: 45 PQQPGMFAQMASTAAGVAVGSTIGHTLGAGITGMFSGSSSXXXXXXXXXXXXXXXXDTFQ 104
P+QP + AQMA+TAAGVAVGS +GHTLG +TG FSG S+ T+
Sbjct: 50 PRQPSLMAQMATTAAGVAVGSAVGHTLGYALTGSFSGGSN--GEPAKLDITYQQHQGTWP 107
Query: 105 NQQATHCDVDARNFTRCLEDNGGNMQIC 132
QQ C + + F C ++ G ++C
Sbjct: 108 AQQQQPCFHEIKQFLECAQNQGDTNKLC 135
>CE01491 [S] KOG4090 Uncharacterized conserved protein
Length = 154
Score = 52.8 bits (125), Expect = 2e-07
Identities = 31/104 (29%), Positives = 48/104 (45%), Gaps = 6/104 (5%)
Query: 40 PHTAQPQQPGMFAQMASTAAGVAVGSTIGHTLGAGITGMFSGSSSXXXXXXXXXXXXXXX 99
P A Q PG+ QMA+TA GVA+GS +GH +G GMF+G S
Sbjct: 53 PMGAPSQGPGLMKQMAATAGGVAIGSAVGHAVG----GMFTGGGSSHAEQAPAAAAAPAG 108
Query: 100 XDTFQNQQATHCDVDARNFTRCLEDNGGNMQICDYYLQQLKACQ 143
+ + C+ + R F C + N ++ +C+ + K C+
Sbjct: 109 APQ-ASGYSQPCEFEWRQFVDCAQ-NQSDVSLCNGFNDIFKQCK 150
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.126 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,940,648
Number of Sequences: 60738
Number of extensions: 212427
Number of successful extensions: 596
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 9
length of query: 149
length of database: 30,389,216
effective HSP length: 96
effective length of query: 53
effective length of database: 24,558,368
effective search space: 1301593504
effective search space used: 1301593504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)