ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1588 good C KOG2495 Energy production and conversion NADH-dehydrogenase (ubiquinone)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1588 561371 562927 519
(519 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YML120c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 738 0.0
YMR145c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 391 e-108
YDL085w [C] KOG2495 NADH-dehydrogenase (ubiquinone) 356 5e-98
SPAC3A11.07 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 332 1e-90
SPBC947.15c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 306 4e-83
At4g21490 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 288 2e-77
At4g05020 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 249 9e-66
At1g07180 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 226 5e-59
At2g20800 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 217 4e-56
At2g29990 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 212 1e-54
At4g28220 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 207 3e-53
>YML120c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 513
Score = 738 bits (1906), Expect = 0.0
Identities = 370/507 (72%), Positives = 426/507 (83%), Gaps = 4/507 (0%)
Query: 13 RRLSSVSLAVRHSSTSTVHSAKDGSKVPAGSASFTTTKLIENNADNKPNVVILGSGWGAI 72
R L+S + VR +ST + G AG SF T K+I+ +KPNV+ILGSGWGAI
Sbjct: 11 RLLTSTNTLVRFASTRSTGVENSG----AGPTSFKTMKVIDPQHSDKPNVLILGSGWGAI 66
Query: 73 SFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPVVNFALKKKGNVSYYE 132
SFL+HID KKYNVSI+SPR+YFLFTPLLPS PVGTVDEKSIIEP+VNFALKKKGNV+YYE
Sbjct: 67 SFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYE 126
Query: 133 AEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIKYDYLLTAVGAEPNTFGIP 192
AEATSINPDRNTVTIKS+S VSQLYQPE HLGL Q + AEIKYDYL++AVGAEPNTFGIP
Sbjct: 127 AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIP 186
Query: 193 GVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRLLTIXXXXXXXXXXETAGE 252
GV YG+FLKEIP+SL+IR+ F AN+EKANLLPKGDPER+RLL+I E AGE
Sbjct: 187 GVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGE 246
Query: 253 LQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQDVLSKTNINLMLRTAV 312
LQDYV QDL++F+P++AEEVQIHLVEALP VLNMFEKKL+SYAQ L T+I + LRTAV
Sbjct: 247 LQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAV 306
Query: 313 GKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDLFKKITEQNASTRALNV 372
KVE+ L+AKTK DG +TE+T+PYGTLIWATGNKARP++TDLFKKI EQN+S R L V
Sbjct: 307 AKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAV 366
Query: 373 DEHLLVKGSNNIFAIGDNAFAGLPPTAQVAHQQAEYLAKVFDKMAKIPGFQQELATRKEK 432
++ L VKGSNNIFAIGDNAFAGLPPTAQVAHQ+AEYLAK FDKMA+IP FQ+ L++RK+K
Sbjct: 367 NDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDK 426
Query: 433 IDLLFEENGFKPFKYVHLGALAYLGAEKAIANITYGKRSFYTGGGLITFYIWRVLYVGMI 492
IDLLFEEN FKPFKY LGALAYLG+E+AIA I GKR+FYTGGGL+TFY+WR+LY+ MI
Sbjct: 427 IDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMI 486
Query: 493 LSARSRFKVIADWLKLAFFKRDCFKEL 519
LSARSR KV DW+KLAFFKRD FK L
Sbjct: 487 LSARSRLKVFFDWIKLAFFKRDFFKGL 513
>YMR145c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 560
Score = 391 bits (1004), Expect = e-108
Identities = 213/469 (45%), Positives = 295/469 (62%), Gaps = 28/469 (5%)
Query: 55 NADNKPNVVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSII 114
N + +VILGSGWG++S L+++D YNV +VSPRNYFLFTPLLPSTPVGT++ KSI+
Sbjct: 108 NGSKRKTLVILGSGWGSVSLLKNLDTTLYNVVVVSPRNYFLFTPLLPSTPVGTIELKSIV 167
Query: 115 EPVVNFALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIK 174
EPV A + G V YYEAEA ++P+ T+ +KS + + + ++K
Sbjct: 168 EPVRTIARRSHGEVHYYEAEAYDVDPENKTIKVKSSAK-------------NNDYDLDLK 214
Query: 175 YDYLLTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRL 234
YDYL+ VGA+PNTFG PGV +Y +FLKEI + +IR + +++IEKA L DPER RL
Sbjct: 215 YDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKDPERARL 274
Query: 235 LTIXXXXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSY 294
L+ E A EL+DYVDQDL+++MP +++E+++ LVEALPN+LNMF+K L Y
Sbjct: 275 LSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMFDKYLVDY 334
Query: 295 AQDVLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVT 354
AQD+ + I+L L+T V KV+ + AKT D D + +PYG L+WATGN R +
Sbjct: 335 AQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGD----IENIPYGVLVWATGNAPREVSK 390
Query: 355 DLFKKITEQNASTRALNVDEHLLVKGS-NNIFAIGDNAF-AGLPPTAQVAHQQAEYLAKV 412
+L K+ EQ+ S R L +D L + G+ +IFAIGD F GL PTAQVAHQ+ EYLA+
Sbjct: 391 NLMTKLEEQD-SRRGLLIDNKLQLLGAKGSIFAIGDCTFHPGLFPTAQVAHQEGEYLAQY 449
Query: 413 FDKMAKIPGFQQELATRKE-------KIDLLFEENGFKPFKYVHLGALAYLGAEKAIANI 465
F K KI ++ K+ K ++ ++ + FKY H GALAY+G++KAIA++
Sbjct: 450 FKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALAYIGSDKAIADL 509
Query: 466 TYGKRSFYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
G+ Y G TF W+ Y+ M LS R+R V DW K+ F RD
Sbjct: 510 AVGEAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGRD 557
>YDL085w [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 545
Score = 356 bits (913), Expect = 5e-98
Identities = 199/469 (42%), Positives = 284/469 (60%), Gaps = 28/469 (5%)
Query: 55 NADNKPNVVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSII 114
N K +VILG+GWGAIS L+ +D YNV++VSPR++FLFTPLLPSTPVGT++ KSI+
Sbjct: 93 NGLKKKELVILGTGWGAISLLKKLDTSLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIV 152
Query: 115 EPVVNFALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIK 174
EPV + A + G V Y EAEA ++P V ++SVS + + +
Sbjct: 153 EPVRSIARRTPGEVHYIEAEALDVDPKAKKVMVQSVSE-------------DEYFVSSLS 199
Query: 175 YDYLLTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRL 234
YDYL+ +VGA+ TF IPGV NFLKEI + IR + + IE+A+ P DPERKRL
Sbjct: 200 YDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIRMKLMKTIEQASSFPVNDPERKRL 259
Query: 235 LTIXXXXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSY 294
LT E A ELQDY++QDL+++MP +++E+++ L+EALPN+LNMF+K L Y
Sbjct: 260 LTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEMKVILIEALPNILNMFDKTLIKY 319
Query: 295 AQDVLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVT 354
A+D+ ++ I+L + TAV VE ++ + T + YG L+WATGN+
Sbjct: 320 AEDLFARDEIDLQVNTAVKVVEPTYI----RTLQNGQTNTDIEYGMLVWATGNEPIDFSK 375
Query: 355 DLFKKITEQNASTRALNVDEHLLVKGS-NNIFAIGD-NAFAGLPPTAQVAHQQAEYLAKV 412
L +I EQ + R L +++ L + GS N+I+AIGD A G PTAQVAHQ+ EYLAK+
Sbjct: 376 TLMSRIPEQ-TNRRGLLINDKLELLGSENSIYAIGDCTAHTGFFPTAQVAHQEGEYLAKI 434
Query: 413 FDKMAKIPGFQQEL--ATRKEKIDLLFEENGFK-----PFKYVHLGALAYLGAEKAIANI 465
DK +I + ++ +T + ++ L +E + F Y H+GALAY+G+E AIA++
Sbjct: 435 LDKKLQIEQLEWDMLNSTDETEVSRLQKEVNLRKSKLDKFNYKHMGALAYIGSETAIADL 494
Query: 466 TYGKRSFYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
G S Y G+ F W+ Y+ M LS R+R + DW K+ F RD
Sbjct: 495 HMGDSS-YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRD 542
>SPAC3A11.07 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 551
Score = 332 bits (850), Expect = 1e-90
Identities = 190/473 (40%), Positives = 273/473 (57%), Gaps = 31/473 (6%)
Query: 58 NKPNVVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPV 117
+K +V+LG+GWGA S L+ ID +NV +VSPRNYFLFT LLPST G+V +SI++P+
Sbjct: 90 SKKTLVVLGAGWGATSILRTIDTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSIVQPI 149
Query: 118 VNFALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIKYDY 177
K V +YEAE T ++ D+ + IK +T G+ E EIKYDY
Sbjct: 150 RYMLRHKSCYVKFYEAECTDVDADKKVIHIKKTTTD----------GVDLEQ--EIKYDY 197
Query: 178 LLTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRLLTI 237
L+ + GAE TF IPG+ +YG FLKEI + +IR R L +E+A R+R +
Sbjct: 198 LVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYVHT 257
Query: 238 XXXXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQD 297
E AGE+ D+++ DLK + P +A++ + LVEALP+VL MF KL Y Q
Sbjct: 258 VVVGGGPTGMEFAGEMADFIEDDLKSWYPELADDFAVTLVEALPSVLPMFSAKLRDYTQS 317
Query: 298 VLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDLF 357
+ ++I + TA+ KV +++ + K+ DG+ E+ +PYG L+WA GN+ARP+ L
Sbjct: 318 LFDSSHIKIRTNTALKKVTAENIHVEVKNPDGSKQEEVIPYGLLVWAGGNRARPLTKKLM 377
Query: 358 KKITEQNASTRALNVDEHLLVKGSNNIFAIGDNAFAGLPPTAQVAHQQAEYLAKVFDKMA 417
+ EQN + R L VDE+L +KG +IFA+GD PTAQVA QQ YL ++F+K+
Sbjct: 378 EGSEEQN-NRRGLVVDEYLKLKGYKDIFALGDCTHTAYAPTAQVASQQGAYLGQLFNKLG 436
Query: 418 KI----PGFQQELATRKEK-----IDLLFEENG----FKPFKYVHLGALAYLGAEKAIAN 464
+ P + +A E I L E++ F PFKY H G+LAY+G EKAIA+
Sbjct: 437 SLNFEKPSEDRHIALGDEMDSSTLISLANEKHASTKVFLPFKYSHQGSLAYVGHEKAIAD 496
Query: 465 IT---YGKRSFYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
I +GK+ G + FY WR +Y+ + S R+R V DW+++ F RD
Sbjct: 497 IEVPWFGKQ--LHASGALAFYFWRSVYLSELYSLRNRTNVTLDWIRVKLFGRD 547
>SPBC947.15c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 551
Score = 306 bits (785), Expect = 4e-83
Identities = 175/469 (37%), Positives = 263/469 (55%), Gaps = 26/469 (5%)
Query: 59 KPNVVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPVV 118
K N+V+LGSGWGA++ ++++D YN+++VSPR++FLFTP+LPS VGT+ SI EP+V
Sbjct: 90 KKNIVVLGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSITEPIV 149
Query: 119 NFALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIKYDYL 178
K + ++AE T+I+ VTI+ + ++ + A I YD L
Sbjct: 150 ALFKGKIDPSNIHQAECTAIDTSAKKVTIRGTTEANEGKE------------AVIPYDTL 197
Query: 179 LTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPE-RKRLLTI 237
+ A+GA TFGI GV +G FLKE + ++ R +E+ PE R RLL I
Sbjct: 198 VFAIGAGNQTFGIQGVRDHGCFLKEAGDAKKVFNRIFEILEQVRFNKDLSPEERARLLHI 257
Query: 238 XXXXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQD 297
E A E+QD++D D+K P + +++ + L+EA P VL MF K L +Y ++
Sbjct: 258 TVVGGGPTGMEFAAEMQDFIDNDVKDMFPELQKDIHVTLIEAAPGVLPMFTKSLITYTEN 317
Query: 298 VLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDLF 357
+ NI +M +T V V + +LI + + DG+ Q +PYG L+WA G ARP+ L
Sbjct: 318 LFKNLNIKIMTKTVVKDVNEKNLIVQKTNPDGSKAMQEIPYGMLVWAAGITARPLTRTLM 377
Query: 358 KKITEQNASTRALNVDEHLLVKGSNNIFAIGDNAFAGLPPTAQVAHQQAEYLA------- 410
I EQ+ + + L VDE VKG ++A+GD AF+GLP TAQVA+QQ +LA
Sbjct: 378 SSIPEQSGARKGLIVDEFFRVKGVPEMYAVGDCAFSGLPATAQVANQQGAWLAKNLNVEG 437
Query: 411 KVFDKMAKIPGFQQELATRKEKIDLL-----FEENGFKPFKYVHLGALAYLGAEKAIANI 465
K F +I +++L ++ + E+ +PFKY H GALAY+G EKAIA++
Sbjct: 438 KKFALHERIQALEKQLGEKEAPSQVAGLKQQVEQLKLEPFKYHHQGALAYVGDEKAIADL 497
Query: 466 TYG-KRSFYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKR 513
+ G++ WR+ Y+ ++SARS+F V+ DWLK F R
Sbjct: 498 KLPFMKKMLPLQGIVGHTFWRLAYLNELISARSQFMVLIDWLKTRLFGR 546
>At4g21490 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 478
Score = 288 bits (736), Expect = 2e-77
Identities = 167/459 (36%), Positives = 254/459 (54%), Gaps = 30/459 (6%)
Query: 59 KPNVVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPVV 118
K VV+LG+GW SFL+ ++ Y V ++SPRNYF FTPLLPS GTV+ +S++EP+
Sbjct: 43 KRKVVLLGTGWAGASFLKTLNNSSYEVQVISPRNYFAFTPLLPSVTCGTVEARSVVEPIR 102
Query: 119 NFALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIKYDYL 178
N A K+ +S+ EAE I+P V +S V+ + E ++ YDYL
Sbjct: 103 NIARKQNVEMSFLEAECFKIDPGSKKVYCRSKQGVNSKGKKE----------FDVDYDYL 152
Query: 179 LTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRLLTIX 238
+ A GA+ NTF IPGVE+ +FLKE+ + +IR + + EKA+L + ERKR+L
Sbjct: 153 VIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKASLPGLNEQERKRMLHFV 212
Query: 239 XXXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQDV 298
E A EL D+V++DL + P VQI L+EA ++L MF+K++T +A++
Sbjct: 213 VVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADHILTMFDKRITEFAEEK 272
Query: 299 LSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDLFK 358
++ I++ L + V KV + AKTK + T+PYG ++W+TG RP++ D K
Sbjct: 273 FTRDGIDVKLGSMVVKVNDKEISAKTKAGE----VSTIPYGMIVWSTGIGTRPVIKDFMK 328
Query: 359 KITEQNASTRALNVDEHLLVKGSNNIFAIGDNAFAGLPPTAQVAHQQAEYLAKVFDKMAK 418
+I + ++ RAL DE L V+G +NI+A+GD A VA QQ YLAK FD+M
Sbjct: 329 QIGQVSSQRRALATDEWLRVEGCDNIYALGDCATIN-QRKVMVAAQQGTYLAKCFDRM-- 385
Query: 419 IPGFQQELATRKEKIDLLFEENG---FKPFKYVHLGALAYLGAEKAIANITYGKRSFYTG 475
E+ + + + G F+PF+Y HLG A LG E+ A + +
Sbjct: 386 ------EVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGEQTAAQLP----GDWVS 435
Query: 476 GGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
G + ++W +Y +S R+R V++DW++ F RD
Sbjct: 436 IGHSSQWLWYSVYASKQVSWRTRVLVVSDWMRRFIFGRD 474
>At4g05020 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 583
Score = 249 bits (635), Expect = 9e-66
Identities = 148/389 (38%), Positives = 216/389 (55%), Gaps = 35/389 (8%)
Query: 5 SQTRNLAVRRLSSVSLAVRHSSTSTVHSAKDGSKVPAGSASFTTTKLIENNADNKPNVVI 64
S TR L V +S L + +S + + A G+ V G+ K VV+
Sbjct: 19 SLTRILVVSTISGGGL-IAYSEANASYGANGGAVVETGT--------------KKKKVVL 63
Query: 65 LGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPVVNFALKK 124
LG+GW SFL++++ +Y V I+SPRNYF FTPLLPS GTV+ +S++EP+ N KK
Sbjct: 64 LGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIGRKK 123
Query: 125 KGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAE--IKYDYLLTAV 182
+ SY EAE I+P V +S GLS E + YDYL+ A
Sbjct: 124 NVDTSYLEAECFKIDPASKKVYCRSKQ------------GLSSNGKKEFSVDYDYLVIAT 171
Query: 183 GAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRLLTIXXXXX 242
GA+ NTF IPGVE+ +FLKE+ + +IRK + + EKA+L D ERKR+L
Sbjct: 172 GAQSNTFNIPGVEENCHFLKEVEDAQRIRKTVIDSFEKASLPELSDEERKRILHFVVVGG 231
Query: 243 XXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQDVLSKT 302
E A EL D+V +DL P V+I L+EA ++L MF+K++T +A++ S+
Sbjct: 232 GPTGVEFAAELHDFVTEDLVSLYPRAKGSVRITLLEAADHILTMFDKRITEFAEEKFSRD 291
Query: 303 NINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDLFKKITE 362
I++ L + V KV + + AKTK + ++PYG ++W+TG RP++ D K+I +
Sbjct: 292 GIDVKLGSMVTKVNEKDISAKTKGGE----VSSIPYGMIVWSTGIGTRPVIKDFMKQIGQ 347
Query: 363 QNASTRALNVDEHLLVKGSNNIFAIGDNA 391
N RAL DE L V+G++NI+A+GD A
Sbjct: 348 GN--RRALATDEWLRVEGTDNIYALGDCA 374
Score = 65.9 bits (159), Expect = 1e-10
Identities = 48/163 (29%), Positives = 77/163 (46%), Gaps = 15/163 (9%)
Query: 353 VTDLFKKITEQNASTRALNVDEHLLVKGSNNIFAIGDNAFAGLPPTAQVAHQQAEYLAKV 412
+ DL K+ + S + L ++ + + D+ LP TAQVA QQ YLAK
Sbjct: 431 IADLLKEAETDDVSKNNIE----LKIEEFKSALSQVDSQVKFLPATAQVAAQQGAYLAKC 486
Query: 413 FDKMAKIPGFQQ-ELATRKEKIDLLFEENGFKPFKYVHLGALAYLGAEKAIANITYGKRS 471
FD+M + + + R E + F+PF+Y HLG A LG E+ A +
Sbjct: 487 FDRMEECEKSPEGPIRMRGE------GRHRFRPFRYRHLGQFAPLGGEQTAAQLP----G 536
Query: 472 FYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
+ G + ++W +Y +S R+R V++DW++ F RD
Sbjct: 537 DWVSIGHSSQWLWYSVYASKQVSWRTRVLVVSDWMRRFIFGRD 579
>At1g07180 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 510
Score = 226 bits (577), Expect = 5e-59
Identities = 153/467 (32%), Positives = 248/467 (52%), Gaps = 44/467 (9%)
Query: 59 KPNVVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPV- 117
KP V++LGSGW L+ ID Y+V VSPRN+ +FTPLL ST VGT++ +S+ EP+
Sbjct: 73 KPRVLVLGSGWAGCRVLKGIDTSIYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIS 132
Query: 118 -VNFALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIKYD 176
+ A+ ++ Y+ A + ++ D + V ++V+ S +P K +I YD
Sbjct: 133 RIQPAISREPGSYYFLANCSKLDADNHEVHCETVTEGSSTLKPWKF---------KIAYD 183
Query: 177 YLLTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRLLT 236
L+ A GAE +TFGI GV + FL+E+ H+ +IR++ L N+ + + G+ E+KRLL
Sbjct: 184 KLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRKLLLNLMLSEVPGIGEDEKKRLLH 243
Query: 237 IXXXXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQ 296
E +GEL D++ +D+++ + +++++ L+EA ++L+ F+ +L YA
Sbjct: 244 CVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEA-RDILSSFDDRLRHYAI 302
Query: 297 DVLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDL 356
L+K+ + L +R V +V+ LI DG VPYG L+W+TG V L
Sbjct: 303 KQLNKSGVKL-VRGIVKEVKPQKLILD----DGT----EVPYGPLVWSTGVGPSSFVRSL 353
Query: 357 -FKKITEQNASTRALNVDEHLLVKGSNNIFAIGD-------NAFAGLPPTAQVAHQQAEY 408
F K + +DE + V ++FAIGD + LP AQVA ++ +Y
Sbjct: 354 DFPK-----DPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKY 408
Query: 409 LAKVFDKMAKIPGFQQELATRKEKIDLLFEENGFKPFKYVHLGALAYLGAEKAIANITYG 468
LA +F+ M K G + A E +PF Y HLG++A +G KA+ ++
Sbjct: 409 LANLFNVMGKAGGGRANSAKEMEL---------GEPFVYKHLGSMATIGRYKALVDLRES 459
Query: 469 KR-SFYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
K + G ++++IWR Y+ ++S R+RF V +WL F RD
Sbjct: 460 KEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRD 506
>At2g20800 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 582
Score = 217 bits (552), Expect = 4e-56
Identities = 125/341 (36%), Positives = 193/341 (55%), Gaps = 21/341 (6%)
Query: 53 ENNADNKPNVVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKS 112
+ N K VV+LGSGW SFL +++ Y+V +VSPRN+FLFTPLLPS GTV+ +S
Sbjct: 57 DGNPIRKKKVVVLGSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARS 116
Query: 113 IIEPVVNFALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAE 172
I+EP+ ++KKG Y EAE I+ + +S G S + T E
Sbjct: 117 IVEPIRGL-MRKKG-FEYKEAECVKIDASNKKIHCRSKE------------GSSLKGTTE 162
Query: 173 --IKYDYLLTAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPE 230
+ YD L+ AVGA+PNTF PGVE++ FLKE +L IR + E+A+L + E
Sbjct: 163 FDMDYDILILAVGAKPNTFNTPGVEEHAYFLKEAEDALNIRHSVIDCFERASLPNLTEEE 222
Query: 231 RKRLLTIXXXXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKK 290
RK++L E + EL D++ QD+ + P + E +I L+EA ++LNMF+K+
Sbjct: 223 RKKILHFVVVGGGPTGVEFSAELHDFLVQDVAKIYPKVQEFTKITLLEAGDHILNMFDKR 282
Query: 291 LTSYAQDVLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKAR 350
+T++A++ + I+L + V V D + K ++ V+E PYG ++W+TG +R
Sbjct: 283 ITAFAEEKFQRDGIDLKTGSMVVGVTADEISTKERETGKIVSE---PYGMVVWSTGIGSR 339
Query: 351 PIVTDLFKKITEQNASTRALNVDEHLLVKGSNNIFAIGDNA 391
P++ D ++I + R L DE L V+G + ++A+GD A
Sbjct: 340 PVIKDFMQQIGQ--GQRRVLATDEWLRVEGCDGVYALGDTA 378
Score = 72.4 bits (176), Expect = 2e-12
Identities = 46/129 (35%), Positives = 66/129 (50%), Gaps = 15/129 (11%)
Query: 389 DNAFAGLPPTAQVAHQQAEYLAKVFDKMAKIPGFQQELATRKEKIDLLFEENG---FKPF 445
D+ LP TAQVA QQ +YLAK F+KM K +K + L F G F+PF
Sbjct: 462 DSQMKNLPATAQVASQQGKYLAKCFNKMEK--------CEKKPEGPLRFRGEGRHRFQPF 513
Query: 446 KYVHLGALAYLGAEKAIANITYGKRSFYTGGGLITFYIWRVLYVGMILSARSRFKVIADW 505
+Y H G+ A LG E+ A + + G + ++W +Y ++S R+R VI+DW
Sbjct: 514 RYRHFGSFAPLGGEQTAAELP----GDWVSIGHSSQWLWYSVYASKLVSWRTRMLVISDW 569
Query: 506 LKLAFFKRD 514
+ F RD
Sbjct: 570 TRRFVFGRD 578
>At2g29990 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 508
Score = 212 bits (540), Expect = 1e-54
Identities = 153/523 (29%), Positives = 265/523 (50%), Gaps = 47/523 (8%)
Query: 7 TRNLAVRRLSSVSLAVRHSSTSTVHSAKDG-----SKVPAGSASFTTTKLIENNADNKPN 61
T ++ R +S S ++ ++ S +A++ +K+P + L KP
Sbjct: 14 TSSIITRFRNSGSSSLSYTLASRFCTAQETQIQSPAKIPNDVDRSQYSGLPPTREGEKPR 73
Query: 62 VVILGSGWGAISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPV--VN 119
VV+LGSGW ++ ID Y+V VSPRN+ +FTPLL ST VGT++ +S+ EP+ +
Sbjct: 74 VVVLGSGWAGCRLMKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRIQ 133
Query: 120 FALKKKGNVSYYEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIKYDYLL 179
A+ ++ ++ A + ++ D + V ++++ +P K +I YD L+
Sbjct: 134 PAISREPGSFFFLANCSRLDADAHEVHCETLTDGLNTLKPWKF---------KIAYDKLV 184
Query: 180 TAVGAEPNTFGIPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRLLTIXX 239
A GAE +TFGI GV + FL+E+ H+ +IR++ L N+ ++ E++RLL
Sbjct: 185 IASGAEASTFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRRLLHCVV 244
Query: 240 XXXXXXXXETAGELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQDVL 299
E +GEL D++ +D+++ + +++ + L+EA ++L+ F+ +L YA L
Sbjct: 245 VGGGPTGVEFSGELSDFIMKDVRQRYAHVKDDIHVTLIEA-RDILSSFDDRLRRYAIKQL 303
Query: 300 SKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDLFKK 359
+K+ + +R V V+ LI DG VPYG L+W+TG P V +
Sbjct: 304 NKSGVR-FVRGIVKDVQSQKLILD----DGT----EVPYGLLVWSTGVGPSPFV----RS 350
Query: 360 ITEQNASTRALNVDEHLLVKGSNNIFAIGD-------NAFAGLPPTAQVAHQQAEYLAKV 412
+ T + +DE + V ++FAIGD LP AQVA ++ +YLA +
Sbjct: 351 LGLPKDPTGRIGIDEWMRVPSVQDVFAIGDCSGYLETTGKPTLPALAQVAEREGKYLANL 410
Query: 413 FDKMAKIPGFQQELATRKEKIDLLFEENGFKPFKYVHLGALAYLGAEKAIANITYGK-RS 471
+ + K G + A ++I+L PF Y HLG++A +G KA+ ++ K
Sbjct: 411 LNAIGKGNGGR---ANSAKEIEL------GVPFVYKHLGSMATIGRYKALVDLRESKDAK 461
Query: 472 FYTGGGLITFYIWRVLYVGMILSARSRFKVIADWLKLAFFKRD 514
+ G ++++IWR Y+ ++S R+RF V +W F RD
Sbjct: 462 GISMTGFVSWFIWRSAYLTRVISWRNRFYVAINWFTTFVFGRD 504
>At4g28220 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 559
Score = 207 bits (527), Expect = 3e-53
Identities = 127/381 (33%), Positives = 205/381 (53%), Gaps = 22/381 (5%)
Query: 15 LSSVSLAVRHSSTST----VHSAKDGSKVPAGSASFTTTKLIENNADNKPNVVILGSGWG 70
LSS+ A R + ++ + + GS V A+ K E+ K VV+LG+GW
Sbjct: 4 LSSLGRASRSAPLASKLLLLGTLSGGSIVAYADANEEANKKEEHK---KKKVVVLGTGWA 60
Query: 71 AISFLQHIDAKKYNVSIVSPRNYFLFTPLLPSTPVGTVDEKSIIEPVVNFALKKKGNVSY 130
ISFL+ +D Y+V +VSP+NYF FTPLLPS GTV+ +SI+E V N KK G +
Sbjct: 61 GISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVESVRNITKKKNGEIEL 120
Query: 131 YEAEATSINPDRNTVTIKSVSTVSQLYQPEKHLGLSQEDTAEIKYDYLLTAVGAEPNTFG 190
+EA+ I+ V + V E LG YDYL+ AVGA+ NTFG
Sbjct: 121 WEADCFKIDHVNQKVHCRPVFKDDPEASQEFSLG----------YDYLIVAVGAQVNTFG 170
Query: 191 IPGVEQYGNFLKEIPHSLQIRKRFLANIEKANLLPKGDPERKRLLTIXXXXXXXXXXETA 250
PGV + +FLKE+ + +IR+ + EKA L + +R+R L E A
Sbjct: 171 TPGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGVEFA 230
Query: 251 GELQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMFEKKLTSYAQDVLSKTNINLMLRT 310
EL D++ +D+ + PS+ E V+I L+++ ++LN F+++++S+A+ ++ I++
Sbjct: 231 AELHDFIIEDITKIYPSVKELVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQTGM 290
Query: 311 AVGKVEKDHLIAKTKDADGNVTEQTVPYGTLIWATGNKARPIVTDLFKKITEQNASTRAL 370
V V + K K + V ++P+G ++W+TG RP+++D +++ + RA+
Sbjct: 291 RVMSVTDKDITVKVKSSGELV---SIPHGLILWSTGVGTRPVISDFMEQVGQ--GGRRAV 345
Query: 371 NVDEHLLVKGSNNIFAIGDNA 391
+E L V G N++A+GD A
Sbjct: 346 ATNEWLQVTGCENVYAVGDCA 366
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,110,891
Number of Sequences: 60738
Number of extensions: 1234638
Number of successful extensions: 3377
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3313
Number of HSP's gapped (non-prelim): 14
length of query: 519
length of database: 30,389,216
effective HSP length: 111
effective length of query: 408
effective length of database: 23,647,298
effective search space: 9648097584
effective search space used: 9648097584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)