ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1630 good K KOG0871 Transcription Class 2 transcription repressor NC2, beta subunit (Dr1)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1630 579217 578759 -153
(153 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR397c [K] KOG0871 Class 2 transcription repressor NC2 beta sub... 151 4e-37
SPBC30D10.02 [K] KOG0871 Class 2 transcription repressor NC2 bet... 125 3e-29
At5g08190 [K] KOG0871 Class 2 transcription repressor NC2 beta s... 88 4e-18
At5g23090 [K] KOG0871 Class 2 transcription repressor NC2 beta s... 87 9e-18
Hs4503381 [K] KOG0871 Class 2 transcription repressor NC2 beta s... 81 6e-16
7298194 [K] KOG0871 Class 2 transcription repressor NC2 beta sub... 74 6e-14
ECU11g0730 [K] KOG0871 Class 2 transcription repressor NC2 beta ... 67 7e-12
Hs8393120 [K] KOG0870 DNA polymerase epsilon subunit D 67 9e-12
7297418 [K] KOG0870 DNA polymerase epsilon subunit D 67 1e-11
At2g47810 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 63 1e-10
At4g14540 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 62 2e-10
At5g47640 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 61 5e-10
At2g13570 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 61 5e-10
At5g47670 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 61 7e-10
At1g09030 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 60 9e-10
CE16097 [K] KOG0871 Class 2 transcription repressor NC2 beta sub... 59 2e-09
At1g21970 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 59 3e-09
Hs5453780 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 58 6e-09
SPAC23C11.08 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 56 2e-08
CE14792 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 56 2e-08
At2g37060 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 56 2e-08
SPBC3D6.09 [K] KOG0870 DNA polymerase epsilon subunit D 54 6e-08
At2g38880 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 54 6e-08
At3g53340 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 53 1e-07
7298623 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 52 3e-07
ECU10g0260 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 50 9e-07
At2g27470 [K] KOG0870 DNA polymerase epsilon subunit D 48 4e-06
>YDR397c [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 146
Score = 151 bits (381), Expect = 4e-37
Identities = 78/138 (56%), Positives = 99/138 (71%)
Query: 1 MVGEVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKEL 60
M G+ D+V+LPKATVQK+ISE+LD DL F+K+AREIII G+EFIM+L+ ASE+AD E
Sbjct: 1 MAGDSDNVSLPKATVQKMISEILDQDLMFTKDAREIIINSGIEFIMILSSMASEMADNEA 60
Query: 61 KKTIAPDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKFKKSGXXXXXXXXXX 120
KKTIAP+HVIK+L++LE++EFIP LEEIL K +QK++E RD+KFKKSG
Sbjct: 61 KKTIAPEHVIKALEELEYNEFIPFLEEILLNFKGSQKVKETRDSKFKKSGLSEEELLRQQ 120
Query: 121 XXXXXXXXXXLQQTSVSD 138
L SVSD
Sbjct: 121 EELFRQSRSRLHHNSVSD 138
>SPBC30D10.02 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 161
Score = 125 bits (313), Expect = 3e-29
Identities = 57/105 (54%), Positives = 86/105 (81%)
Query: 6 DDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIA 65
D+++LPKATVQK++S++L DLTF+KEAR+++IEC VEFI +++ A+EI +KE KKTIA
Sbjct: 8 DELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKTIA 67
Query: 66 PDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKFKKSG 110
+H+IK+L++LEF E+I E+ +HKE QK RE++ +KF++SG
Sbjct: 68 AEHIIKALENLEFKEYIAEALEVAAEHKEQQKNREKKSSKFEQSG 112
>At5g08190 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit
(Dr1)
Length = 162
Score = 88.2 bits (217), Expect = 4e-18
Identities = 39/88 (44%), Positives = 66/88 (74%)
Query: 6 DDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIA 65
+D +LPKAT+ KII E+L +D+ +++A++++IEC VEFI +++ ++E+ +KE K+TIA
Sbjct: 12 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTIA 71
Query: 66 PDHVIKSLQDLEFDEFIPPLEEILHQHK 93
P+HV+K+LQ L F E++ + QHK
Sbjct: 72 PEHVLKALQVLGFGEYVEEVYAAYEQHK 99
>At5g23090 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 159
Score = 87.0 bits (214), Expect = 9e-18
Identities = 41/101 (40%), Positives = 69/101 (67%)
Query: 6 DDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIA 65
+D +LPKAT+ KII E+L D+ +++A++++IEC VEFI +++ ++++ +KE K+TIA
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 66 PDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKF 106
P+HV+K+LQ L F E+I + QHK +R K+
Sbjct: 72 PEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKW 112
>Hs4503381 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 176
Score = 80.9 bits (198), Expect = 6e-16
Identities = 38/108 (35%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 3 GEVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKK 62
G DD+T+P+A + K+I E L + + + +ARE+++ C EFI +++ A+EI +K KK
Sbjct: 6 GNDDDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKK 64
Query: 63 TIAPDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKFKKSG 110
TI+P+HVI++L+ L F +I ++E+L + K R + ++ + G
Sbjct: 65 TISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLG 112
>7298194 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 183
Score = 74.3 bits (181), Expect = 6e-14
Identities = 37/107 (34%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 4 EVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKT 63
E D++TLP+A++ KII E++ + + + E+RE+I+ C EFI +++ A+E+ + KKT
Sbjct: 14 EDDELTLPRASINKIIKELVPT-VRVANESRELILNCCSEFIHLISSEANEVCNMRNKKT 72
Query: 64 IAPDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKFKKSG 110
I +HV+++L+ L F ++ E +LH KE R R+ + + G
Sbjct: 73 INAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLG 119
>ECU11g0730 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 147
Score = 67.4 bits (163), Expect = 7e-12
Identities = 37/108 (34%), Positives = 66/108 (60%), Gaps = 6/108 (5%)
Query: 6 DDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIA 65
D+ TLPKATV K++S +L + KE++EI + F+ ML A++ ++E KKTI+
Sbjct: 8 DENTLPKATVDKMVSSMLPKNSVVPKESKEIFQNACIYFLNMLTLEANKACEEEKKKTIS 67
Query: 66 PDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDA---KFKKSG 110
+HV K+L++L F+ ++ E + +H+ + +++ + KFK SG
Sbjct: 68 YEHVYKALKNLGFESYV---ESCMKEHENYESYIKQKPSKIDKFKDSG 112
>Hs8393120 [K] KOG0870 DNA polymerase epsilon subunit D
Length = 147
Score = 67.0 bits (162), Expect = 9e-12
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 1 MVGEVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKEL 60
M +D+ LP A + +II E L + SKEAR I F++ A+ A K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 KKTIAPDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKFKK 108
+KT+ V+ +++++EF F+ PL+E L ++ QK ++ + KK
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKK 108
>7297418 [K] KOG0870 DNA polymerase epsilon subunit D
Length = 128
Score = 66.6 bits (161), Expect = 1e-11
Identities = 32/108 (29%), Positives = 63/108 (57%), Gaps = 2/108 (1%)
Query: 1 MVGEVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKEL 60
MV ++D+ LP A + ++I E L + SKEAR I F + + S++ +A K+
Sbjct: 1 MVERIEDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQN 60
Query: 61 KKTIAPDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKFKK 108
KTI ++++L +L+F+ F+P L + L ++ + ++E++++K K
Sbjct: 61 HKTITAKDILQTLTELDFESFVPSLTQDLEVYR--KVVKEKKESKASK 106
>At2g47810 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 160
Score = 63.2 bits (152), Expect = 1e-10
Identities = 32/93 (34%), Positives = 56/93 (59%)
Query: 1 MVGEVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKEL 60
M+ + D LP A V +I+ +L ++ SKEA+E + EC EFI + G AS+ KE
Sbjct: 47 MMVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEK 106
Query: 61 KKTIAPDHVIKSLQDLEFDEFIPPLEEILHQHK 93
+KT+ D + ++ +L FD++ L++ LH+++
Sbjct: 107 RKTVNGDDICWAMANLGFDDYAAQLKKYLHRYR 139
>At4g14540 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 161
Score = 62.4 bits (150), Expect = 2e-10
Identities = 30/88 (34%), Positives = 54/88 (61%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D LP A V +I+ + L ++ SK+A+E + EC EFI + G AS+ +E +KTI
Sbjct: 23 DRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTING 82
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKE 94
D ++ ++ L F++++ PL+ L +++E
Sbjct: 83 DDLLWAMTTLGFEDYVEPLKVYLQKYRE 110
>At5g47640 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 190
Score = 61.2 bits (147), Expect = 5e-10
Identities = 31/88 (35%), Positives = 53/88 (60%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D LP A V +I+ + L ++ SK+A+E + EC EFI + G AS+ KE +KTI
Sbjct: 29 DRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTING 88
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKE 94
D ++ ++ L F++++ PL+ L + +E
Sbjct: 89 DDLLWAMTTLGFEDYVEPLKVYLQRFRE 116
>At2g13570 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 215
Score = 61.2 bits (147), Expect = 5e-10
Identities = 31/90 (34%), Positives = 55/90 (60%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D LP A V +I+ +VL + SK+A+E + EC EFI + G AS+ +E +KTI
Sbjct: 38 DRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTING 97
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKENQ 96
D +I ++ L F++++ PL+ L ++++ +
Sbjct: 98 DDIIWAITTLGFEDYVAPLKVYLCKYRDTE 127
>At5g47670 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 205
Score = 60.8 bits (146), Expect = 7e-10
Identities = 30/88 (34%), Positives = 52/88 (59%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D +P A V +I+ +L + S +++E I EC E+I + G A+E +E +KTI
Sbjct: 31 DRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITA 90
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKE 94
+ V+ ++ L FD++I PL LH+++E
Sbjct: 91 EDVLWAMSKLGFDDYIEPLTLYLHRYRE 118
>At1g09030 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 139
Score = 60.5 bits (145), Expect = 9e-10
Identities = 32/105 (30%), Positives = 56/105 (52%)
Query: 6 DDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIA 65
+D LP A V +++ ++L S+ SKEA++ + EC EFI + ASE +E +KT+
Sbjct: 4 EDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVN 63
Query: 66 PDHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERRDAKFKKSG 110
D + +L L D + + LH+++E ++ R + SG
Sbjct: 64 GDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNKGSNDSG 108
>CE16097 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 184
Score = 59.3 bits (142), Expect = 2e-09
Identities = 35/109 (32%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 4 EVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKT 63
E +++ LP+ + +II EV+ ++ + E+R++I C VEF+ +A A IA ++ +KT
Sbjct: 16 EDNEIGLPQKGINQIIKEVVP-EMRIANESRDMINACCVEFVKHIAREAQRIASQDQRKT 74
Query: 64 IAPDHVIKSLQDLEF-DEFIPPLEEILHQHK-ENQKIRERRDAKFKKSG 110
I +HV K+LQ+L F +++ + +L K E +K R++++ +K G
Sbjct: 75 IYHEHVQKALQNLGFTPDYLEAADSVLDACKVEAEKKLRRKNSRLEKCG 123
>At1g21970 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 208
Score = 58.9 bits (141), Expect = 3e-09
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 2 VGEVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELK 61
V D +P A V +I+ + L S S +A+E I EC E+I + G A+E +E +
Sbjct: 26 VAREQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQR 85
Query: 62 KTIAPDHVIKSLQDLEFDEFIPPLEEILHQHKE 94
KTI + ++ ++ L FD ++ PL +++++E
Sbjct: 86 KTITAEDILWAMSKLGFDNYVDPLTVFINRYRE 118
>Hs5453780 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 207
Score = 57.8 bits (138), Expect = 6e-09
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D+ LP A V +I+ + +K+A+E + EC EFI + ASE +E +KTI
Sbjct: 56 DIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTING 115
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKENQK 97
+ ++ ++ L FD ++ PL+ L + +E K
Sbjct: 116 EDILFAMSTLGFDSYVEPLKLYLQKFREAMK 146
>SPAC23C11.08 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 116
Score = 56.2 bits (134), Expect = 2e-08
Identities = 30/87 (34%), Positives = 49/87 (55%)
Query: 10 LPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAPDHV 69
LP A V +I+ L + SKEA++ + +C EFI + G ASE +E +KTI + V
Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDV 71
Query: 70 IKSLQDLEFDEFIPPLEEILHQHKENQ 96
+ +L L F+ + L+ L +++E Q
Sbjct: 72 LLALNTLGFENYAEVLKISLTKYREQQ 98
>CE14792 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 403
Score = 56.2 bits (134), Expect = 2e-08
Identities = 28/89 (31%), Positives = 49/89 (54%)
Query: 10 LPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAPDHV 69
LP A V +I+ +D +K+A+E EC EFI +A A+EI + +KTI D +
Sbjct: 66 LPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTITADDL 125
Query: 70 IKSLQDLEFDEFIPPLEEILHQHKENQKI 98
+ +++ FD + P+ L ++++ KI
Sbjct: 126 LTAMEATGFDNYAEPMRIFLQKYRQAHKI 154
>At2g37060 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 178
Score = 56.2 bits (134), Expect = 2e-08
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D LP A + +I+ L ++ +K+A+EI+ EC EFI + AS+ +E +KTI
Sbjct: 32 DRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTING 91
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKENQKIRERR--DAKFKKSG 110
D ++ ++ L F++++ PL+ L +++E + D KK G
Sbjct: 92 DDLLWAMATLGFEDYMEPLKVYLMRYREGDTKGSAKGGDPNAKKDG 137
>SPBC3D6.09 [K] KOG0870 DNA polymerase epsilon subunit D
Length = 210
Score = 54.3 bits (129), Expect = 6e-08
Identities = 25/90 (27%), Positives = 49/90 (53%)
Query: 4 EVDDVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKT 63
E+DD+ LP++ + +++ VL KEA + +I F+ L ++ EIA +K
Sbjct: 11 ELDDLALPRSIIMRLVKGVLPEKSLVQKEALKAMINSATLFVSFLTSASGEIATNNNRKI 70
Query: 64 IAPDHVIKSLQDLEFDEFIPPLEEILHQHK 93
+ P V+ +L ++E+ EF L++ L ++
Sbjct: 71 LMPQDVLNALDEIEYPEFSKTLKKHLEAYE 100
>At2g38880 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 138
Score = 54.3 bits (129), Expect = 6e-08
Identities = 26/88 (29%), Positives = 51/88 (57%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D LP A + +I+ + L + K+A++ + EC EFI + AS+ KE +KT+
Sbjct: 23 DRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNG 82
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKE 94
D ++ ++ L F++++ PL+ L +++E
Sbjct: 83 DDLLWAMATLGFEDYLEPLKIYLARYRE 110
>At3g53340 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 228
Score = 53.1 bits (126), Expect = 1e-07
Identities = 28/88 (31%), Positives = 51/88 (57%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D LP A + +I+ L + +K+A+E + EC EFI + AS+ +E +KTI
Sbjct: 31 DRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTING 90
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKE 94
D ++ ++ L F+++I PL+ L +++E
Sbjct: 91 DDLLWAMATLGFEDYIDPLKVYLMRYRE 118
>7298623 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 183
Score = 52.0 bits (123), Expect = 3e-07
Identities = 29/92 (31%), Positives = 50/92 (53%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D LP + KI+ + + +K+ARE I EC EFI ++ A E + E +KT+
Sbjct: 40 DRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNG 99
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKENQKI 98
D ++ + +L FD ++ PL L +++E +I
Sbjct: 100 DDLLVAFSNLGFDNYVEPLSIYLQKYREVSEI 131
>ECU10g0260 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 118
Score = 50.4 bits (119), Expect = 9e-07
Identities = 25/97 (25%), Positives = 56/97 (56%), Gaps = 3/97 (3%)
Query: 7 DVTLPKATVQKIISEVLDSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTIAP 66
D +LP A + KI+ + + + +K+A+EI+ + EFI ++ A EI + E +KT+
Sbjct: 12 DRSLPIANISKIMKKPIPKEAKVAKDAKEIMQKSAGEFIAIITCRAKEICESEARKTVTG 71
Query: 67 DHVIKSLQDLEFDEFIPPLEEILHQHKE---NQKIRE 100
+ +I+++ +L+ + + Q++E N+++R+
Sbjct: 72 EDLIRAMDELDMPYYAELARKYYIQYRELAKNERVRK 108
>At2g27470 [K] KOG0870 DNA polymerase epsilon subunit D
Length = 275
Score = 48.1 bits (113), Expect = 4e-06
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 10 LPKATVQKIISEVL-----DSDLTFSKEAREIIIECGVEFIMMLAGSASEIADKELKKTI 64
LP A V++++ + L D D++ KEA E FI L+ +A++ ++T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 65 APDHVIKSLQDLEFDEFIPPLEEILHQHKE 94
D V K+L++++F EF+ PL+ L K+
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDFKK 100
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.313 0.132 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,080,305
Number of Sequences: 60738
Number of extensions: 229791
Number of successful extensions: 684
Number of sequences better than 1.0e-05: 27
Number of HSP's better than 0.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 657
Number of HSP's gapped (non-prelim): 27
length of query: 153
length of database: 30,389,216
effective HSP length: 97
effective length of query: 56
effective length of database: 24,497,630
effective search space: 1371867280
effective search space used: 1371867280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)