ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1805 good J KOG1384 Translation, ribosomal structure and biogenesis tRNA delta(2)-isopentenylpyrophosphate transferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1805 643196 641904 -431
(431 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR274w [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate trans... 512 e-145
SPAC343.15 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tr... 291 1e-78
CE26333 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate trans... 188 2e-47
At2g27760 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 165 1e-40
Hs8923065 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 127 2e-29
At5g20040 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 115 1e-25
At4g24650 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 112 1e-24
At1g68460 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 106 8e-23
At5g19040 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 101 2e-21
At3g19160 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 100 5e-21
At3g63110 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 99 1e-20
At1g25410 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 93 9e-19
At3g23630 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate tra... 86 8e-17
>YOR274w [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 428
Score = 512 bits (1318), Expect = e-145
Identities = 249/410 (60%), Positives = 312/410 (75%), Gaps = 6/410 (1%)
Query: 1 MLRLLIKSPMMSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNK 60
ML+ +K + KVIVIAGTTGVGKS LSIQ+A KFNGE+INSDSMQ+Y IPIITNK
Sbjct: 1 MLKGPLKGCLNMSKKVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNK 60
Query: 61 HPIEQRMGIKHHLMNHVPWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLF 120
HP+++R GI HH+MNHV W+EEYY HRFE ECM IEDIH RGKIPIVVGGTHYYLQTLF
Sbjct: 61 HPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLF 120
Query: 121 NKRVESK--VRQPTESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLEIYY 178
NKRV++K R+ T + IL+S +PD+IYNTL + D IA K+H ND RRV+RMLEIYY
Sbjct: 121 NKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYY 180
Query: 179 TTGEKPSVTFQQQNTSLKFDTLFFWIYSDPAVLDVRLDNRVDKMMKIGAMEEIMELYEYY 238
TG+KPS TF +Q +LKFDTLF W+YS P L RLD+RVD M++ GA++EI +LYEYY
Sbjct: 181 KTGKKPSETFNEQKITLKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYY 240
Query: 239 KQHNYGQEQCENGVWQVIGFKEFLPWL---EESSECDLNECVEKMKVRTRQYAKRQVKWI 295
Q+ + EQCENGVWQVIGFKEFLPWL + + L +C+E+MK RTRQYAKRQVKWI
Sbjct: 241 SQNKFTPEQCENGVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWI 300
Query: 296 RKMLIPDVDGKVYILNATDLLEWDVSVSARANAILSDFTKGKDIEAPLAQPDLEKLLAYK 355
+KMLIPD+ G +Y+L+ATDL +WD + S RA AI +DF + I+ A LE+LL+
Sbjct: 301 KKMLIPDIKGDIYLLDATDLSQWDTNASQRAIAISNDFISNRPIKQERAPKALEELLSKG 360
Query: 356 SSNSPKSDMDWKQFSCSLCKDKEDKNLVAIGSRNWEIHLKSRRHKTNINR 405
+ K D DW ++C++C++ + KN+VAIG + W+IHL SRRHK+N+ R
Sbjct: 361 ETTMKKLD-DWTHYTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNLKR 409
>SPAC343.15 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 434
Score = 291 bits (745), Expect = 1e-78
Identities = 163/422 (38%), Positives = 242/422 (56%), Gaps = 31/422 (7%)
Query: 11 MSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQRMGIK 70
M +P +VI GTTG GKSDL++Q+A +F ++IN+DSMQ+Y G ITNK +E++ +
Sbjct: 1 MLKPLCVVI-GTTGAGKSDLAVQLAKRFGSQVINADSMQIYRGFDTITNKITVEEQENVH 59
Query: 71 HHLMNHVPWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRV------ 124
H LM+ + +++EY + FER+ I++IHS+GKIPIVVGGTHYYLQ+L +
Sbjct: 60 HRLMSFLNFDKEYSVPEFERDASRVIDEIHSQGKIPIVVGGTHYYLQSLLFEDTTLSAID 119
Query: 125 ----ESKVRQPTESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLEIYYTT 180
+S +P + ILD ++P + + LK++D +A ++H DTR+++R LEIY+ T
Sbjct: 120 KLTNDSSPSKPPHPDSHILD-DDPSAMLSYLKKIDPVMAEQWHPRDTRKIRRSLEIYFHT 178
Query: 181 GEKPSVTFQQQ-----NTSLKFDTLFFWIYSDPAVLDVRLDNRVDKMMKIGAMEEIMELY 235
G PS + +Q + L++ +L FW ++D VL RLD RVDKM+ G ++EI +
Sbjct: 179 GRPPSEIYSEQKMKSSGSKLRYKSLIFWAFADSLVLMPRLDKRVDKMLSHGLVDEIKSMK 238
Query: 236 EYYKQHNYGQEQCENGVWQVIGFKEFLPWLEESSECDLNECVEKMKVRTRQYAKRQVKWI 295
+ + + G+WQ IGFKEF+PW E S+ N+C+E+MKV TRQYAK Q KWI
Sbjct: 239 SLAESEKFSPD-FTRGIWQCIGFKEFMPWFEAPSDIVFNDCLERMKVSTRQYAKSQKKWI 297
Query: 296 RKMLIP------DVDGKVYIL---NATDLLEWDVSVSARANAILSDFTKGKDIEAPLA-- 344
+ +P D+ + N TDL W+ V +A + F D AP A
Sbjct: 298 QSRFLPMCLAQQDLSPSSILFSTTNTTDLNNWEEQVE-KACRVFQYFFYNGDAIAPSADD 356
Query: 345 QPDLEKLLAYKSSNSPKSDMDWKQFSCSLCKDKEDKNLVAIGSRNWEIHLKSRRHKTNIN 404
Q EK Y S + + K+F C C DK IG + +H+KSR+HKT +
Sbjct: 357 QHAFEKARDYLSIMNGRQSQK-KKFVCEECLDKRGDPFTVIGEDAFNVHIKSRKHKTTVR 415
Query: 405 RQ 406
R+
Sbjct: 416 RK 417
>CE26333 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 447
Score = 188 bits (477), Expect = 2e-47
Identities = 139/444 (31%), Positives = 218/444 (48%), Gaps = 68/444 (15%)
Query: 6 IKSPMMSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQ 65
+K M +I + G TG GKSDL + IA K+ GE+I+ DSMQ Y G+ I TNK E+
Sbjct: 10 LKPYKMRTDPIIFVIGCTGTGKSDLGVAIAKKYGGEVISVDSMQFYKGLDIATNKITEEE 69
Query: 66 RMGIKHHLMNHVPWNE--EYYIHRFERECMETI-----------------EDIHSRGKIP 106
GI+HH+M+ + +E Y +H F ++ I + I +R KIP
Sbjct: 70 SEGIQHHMMSFLNPSESSSYNVHSFREVTLDLIKVLNSPLFELDPNFHNFQKIRARSKIP 129
Query: 107 IVVGGTHYY----------LQTLFNKRVESKVRQPTESEKSILDS--NNPDLIYNTLKEV 154
++VGGT YY ++T + V+SK R +ES + +N +L ++ LK++
Sbjct: 130 VIVGGTTYYAESVLYENNLIETNTSDDVDSKSRTSSESSSEDTEEGISNQEL-WDELKKI 188
Query: 155 DLSIANKFHINDTRRVKRMLEIYYTTGEKPSVTFQQQNTS--------LKFD-TLFFWIY 205
D A H N+ RV+R L+I+ TG + S ++Q + L+FD +L ++
Sbjct: 189 DEKSALLLHPNNRYRVQRALQIFRETGIRKSELVEKQKSDETVDLGGRLRFDNSLVIFMD 248
Query: 206 SDPAVLDVRLDNRVDKMMKIGAMEEIMELYEYYKQHNYGQEQCENGVWQVIGFKEFLPWL 265
+ P VL+ RLD RVDKM+K+G EL E+Y +H + GV Q IG KEF+PWL
Sbjct: 249 ATPEVLEERLDGRVDKMIKLGLKN---ELIEFYNEHAEYINHSKYGVMQCIGLKEFVPWL 305
Query: 266 E-ESSECD-------LNECVEKMKVRTRQYAKRQVKWIRKMLIPDVDGKVYILNATDLLE 317
+ SE D + + +K+ TRQYA+RQ +W R L+ DG + + L
Sbjct: 306 NLDPSERDTLNGDKLFKQGCDDVKLHTRQYARRQRRWYRSRLLKRSDGDRKMASTKMLDT 365
Query: 318 WD-VSVSARANAILSDFTKGKDIEAPLAQPDLEKLLAYKSSNSPKSDMDWKQFSCSLCKD 376
D + + I+ + G D+ ++ D +L +N +C +C
Sbjct: 366 SDKYRIISDGMDIVDQWMNGIDLFEDIS-TDTNPILKGSDANI--------LLNCEIC-- 414
Query: 377 KEDKNLVAIGSRNWEIHLKSRRHK 400
N+ G NW+ H+ ++HK
Sbjct: 415 ----NISMTGKDNWQKHIDGKKHK 434
>At2g27760 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 461
Score = 165 bits (418), Expect = 1e-40
Identities = 126/469 (26%), Positives = 217/469 (45%), Gaps = 99/469 (21%)
Query: 10 MMSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQRMGI 69
M + KV+VI G TG GKS L++ +AS F EIIN+D+MQ+Y+G+ ++TNK ++++ G+
Sbjct: 1 MKKKAKVVVIMGPTGSGKSKLAVDLASHFPVEIINADAMQIYSGLDVLTNKVTVDEQKGV 60
Query: 70 KHHLMNHVPWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRVESKVR 129
HHL+ V + E+ F + IE+I SR IP++VGGTHYY+Q + +K +
Sbjct: 61 PHHLLGTVSSDMEFTARDFRDFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAA 120
Query: 130 QPTE----SEKSILDSN--------NPDLI--YNTLKEVDLSIANKFHINDTRRVKRMLE 175
+ TE S++D + DL Y LKE+D AN+ H N+ R++ + L
Sbjct: 121 EDTEECCADVASVVDQDMVVESVFGRDDLSHGYELLKELDPVAANRIHPNNHRKINQYLS 180
Query: 176 IYYTTGEKPSVTFQ-------------QQN----TSLKFDTLFFWIYSDPAVLDVRLDNR 218
++ + G PS +Q +QN + +FD + ++ AVLD ++ R
Sbjct: 181 LHASRGVLPSKLYQGKTAEVDSFFLTSRQNWGCINASRFDYCLICMDAETAVLDRYVEQR 240
Query: 219 VDKMMKIGAMEEIMELYEYYKQHNYGQEQCENGVWQVIGFKEFLPWL------------- 265
VD M+ G ++E+ ++Y+ + G+ Q IG +EF +L
Sbjct: 241 VDAMVDAGLLDEVYDIYKPGADYT-------RGLRQSIGVREFEDFLKIHLSETCAGHLT 293
Query: 266 ---------------------EESSECDLNECVEKMKVRTRQYAKRQVKWIRKM------ 298
++ L E ++++K+ TR+ +RQ + + ++
Sbjct: 294 SLSNDDKVMKENLRKILNFPKDDKLRIMLEEAIDRVKLNTRRLLRRQKRRVSRLETVFGW 353
Query: 299 LIPDVDGKVYILNATDLLEWDVSVSARANAILSDF--TKGKDIEAPLAQPDLEKLLAYKS 356
I +D YIL+ ++ W+ V A+ I+ F T+ + P + +E+ L
Sbjct: 354 NIHYIDATEYILSKSE-ESWNAQVVKPASEIIRCFLETETESGRDPTSGKSIERDL---- 408
Query: 357 SNSPKSDMDWKQFSCSLCKDKEDKNLVAIGSRNWEIHLKSRRHKTNINR 405
W Q+ C C +K + G WE H + R H+ R
Sbjct: 409 ---------WTQYVCEACGNK-----ILRGRHEWEHHKQGRTHRKRTTR 443
>Hs8923065 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 326
Score = 127 bits (320), Expect = 2e-29
Identities = 84/291 (28%), Positives = 143/291 (48%), Gaps = 41/291 (14%)
Query: 139 LDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLEIYYTTGEKPSVTFQQQNTS---- 194
L+ + +++ L +VD +A K H +D R+V R L+++ TG S +Q+T
Sbjct: 13 LEKEDGLVLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHTEEGGG 72
Query: 195 -----LKFDT-LFFWIYSDPAVLDVRLDNRVDKMMKIGAMEEIMELYEYYKQHNYGQ--E 246
LKF W+++D AVLD RLD RVD M+ G +EE+ + + Y Q N + +
Sbjct: 73 PLGGPLKFSNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQ 132
Query: 247 QCENGVWQVIGFKEFLPWLEESSECD-------LNECVEKMKVRTRQYAKRQVKWIRKML 299
++G++Q IGFKEF +L +C L + +E +K T++YA++Q +W++
Sbjct: 133 DYQHGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQVTKRYARKQNRWVKNRF 192
Query: 300 IP---DVDGKVYILNATDLLEWDVSVSARANAILSDFTKG-KDIEAPLAQPDLEKLLAYK 355
+ + VY L +D+ +W+ SV A I+ F +G K P+ P Y
Sbjct: 193 LSRPGPIVPPVYGLEVSDVSKWEESVLEPALEIVQSFIQGHKPTATPIKMP-------YN 245
Query: 356 SSNSPKSDMDWKQFSCSLCKDKEDKNLVAIGSRNWEIHLKSRRHKTNINRQ 406
+ + +S C LC + + IG R W H+KS+ H + ++
Sbjct: 246 EAENKRS-----YHLCDLC------DRIIIGDREWAAHIKSKSHLNQLKKR 285
>At5g20040 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 447
Score = 115 bits (289), Expect = 1e-25
Identities = 91/338 (26%), Positives = 157/338 (45%), Gaps = 58/338 (17%)
Query: 7 KSPMMSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQR 66
K + KVIVI+G TG GKS L++++A + NGEII++DS+Q+Y G+ + + K R
Sbjct: 43 KKKKSEKEKVIVISGPTGAGKSRLAMELAKRLNGEIISADSVQVYKGLDVGSAKPSDSDR 102
Query: 67 MGIKHHLMNHVPWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRVES 126
+ HHL++ + +++Y + +F + + +DI +RG++PIV GGT YL+ +
Sbjct: 103 KVVPHHLIDILHPSQDYSVGQFYDDGRQATKDILNRGRVPIVTGGTGLYLRWF----MYG 158
Query: 127 KVRQPTESEKSILDSNNPDLIYNTLKEVDLSI----------ANKFHINDTRRVKRMLEI 176
K P S + I ++++ + + T D ++ A+ ND R++R LEI
Sbjct: 159 KPDVPKPSPEVIAEAHDMLVGFQTEYNWDAAVELVVNAGDPKASSLPRNDWYRLRRSLEI 218
Query: 177 YYTTGEKPS-----------------------------VTFQQQNTSLKFDTLFFWIYSD 207
+TG PS ++ Q T L +D L F++ S
Sbjct: 219 LKSTGSPPSSFRIPYDSFRVNLVAPDADDFLEDGSSADISIQNIETDLDYDFLCFFLSSP 278
Query: 208 PAVLDVRLDNRVDKMMK--IGAMEEIMELYEYYKQHNYGQEQCENGVWQVIGFKEFLPWL 265
L +D R + M+ G + E L + G N + IG+++ + +L
Sbjct: 279 RVALYRSIDFRCEDMLSGPNGVLSEARWLLD------LGLLPNSNPATRAIGYRQAMEYL 332
Query: 266 -------EESSECDLNECVEKMKVRTRQYAKRQVKWIR 296
ESS + + K + +R +AKRQ+ W R
Sbjct: 333 LQCRRYEGESSPREFYAFLNKFQTASRNFAKRQMTWFR 370
>At4g24650 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 318
Score = 112 bits (280), Expect = 1e-24
Identities = 90/302 (29%), Positives = 125/302 (40%), Gaps = 71/302 (23%)
Query: 10 MMSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQRMGI 69
M K++VI G TG GKS LS+ +A F EIINSD MQ Y G+ I TN+ IE R G+
Sbjct: 1 MKCNDKMVVIMGATGSGKSSLSVDLALHFKAEIINSDKMQFYDGLKITTNQSTIEDRRGV 60
Query: 70 KHHLMNHV-PWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRVESKV 128
HHL+ + P E F E I +I R K+PI+ GG++ Y+ L K +
Sbjct: 61 PHHLLGELNPEAGEVTAAEFRVMAAEAISEITQRKKLPILAGGSNSYIHALLAKSYDP-- 118
Query: 129 RQPTESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLEIYYTTGEKPSVTF 188
E Y + K S+
Sbjct: 119 ----------------------------------------------ENYPFSDHKGSIC- 131
Query: 189 QQQNTSLKFDTLFFWIYSDPAVLDVRLDNRVDKMMKIGAMEEIMELYEYYKQHNYGQEQC 248
+ LK+D F WI D +VL L R+D MMK G EEI E+++ +E
Sbjct: 132 ----SELKYDCCFIWIDVDQSVLFEYLSLRLDLMMKSGMFEEIA---EFHRSKKAPKEPL 184
Query: 249 ENGVWQVIGFKEF------LPWLEESSECD------LNECVEKMKVRTRQYAKRQVKWIR 296
G+W+ IG +EF W + + D + V +K T Q K Q+ I
Sbjct: 185 --GIWKAIGVQEFDDYLKMYKWDNDMDKWDPMRKEAYEKAVRAIKENTFQLTKDQITKIN 242
Query: 297 KM 298
K+
Sbjct: 243 KL 244
>At1g68460 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 357
Score = 106 bits (264), Expect = 8e-23
Identities = 87/315 (27%), Positives = 139/315 (43%), Gaps = 74/315 (23%)
Query: 13 RPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQRMGIKHH 72
+ KV+VI G TG GKS LS+ +A++F EIINSD +Q+Y G+ I TN+ ++ R G+ HH
Sbjct: 64 KDKVVVILGATGAGKSRLSVDLATRFPSEIINSDKIQVYEGLEITTNQITLQDRRGVPHH 123
Query: 73 LMNHV-PWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRVESKVRQP 131
L+ + P + E F +++I SR K+PI+ GG++ ++ L +R + K P
Sbjct: 124 LLGVINPEHGELTAGEFRSAASNVVKEITSRQKVPIIAGGSNSFVHALLAQRFDPKF-DP 182
Query: 132 TESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLEIYYTTGEKPSVTFQQQ 191
S ++ S+
Sbjct: 183 FSSGSCLISSD------------------------------------------------- 193
Query: 192 NTSLKFDTLFFWIYSDPAVLDVRLDNRVDKMMKIGAMEEIMELYEYYKQHNYGQEQCENG 251
L+++ F W+ VL L RVD+MM G EE+ Y+ K G E G
Sbjct: 194 ---LRYECCFIWVDVSETVLYEYLLRRVDEMMDSGMFEELSRFYDPVKS---GLE-TRFG 246
Query: 252 VWQVIG-------FKEFLP------WLEESSECDLNECVEKMKVRTRQYAKRQVKWIRKM 298
+ + IG FKE+ P W + + ++ V+ +K T AKRQVK I
Sbjct: 247 IRKAIGVPEFDGYFKEYPPEKKMIKW-DALRKAAYDKAVDDIKRNTWTLAKRQVKKIE-- 303
Query: 299 LIPDVDGKVYILNAT 313
++ D ++ ++AT
Sbjct: 304 MLKDAGWEIERVDAT 318
>At5g19040 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 330
Score = 101 bits (251), Expect = 2e-21
Identities = 61/243 (25%), Positives = 128/243 (52%), Gaps = 15/243 (6%)
Query: 13 RPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQRMGIKHH 72
+ KV+ + G TG GKS L+I +A++F EI+NSD +Q+Y G+ I+TNK E+ +G+ HH
Sbjct: 32 KDKVVFVMGATGTGKSRLAIDLATRFPAEIVNSDKIQVYKGLDIVTNKVTPEESLGVPHH 91
Query: 73 LMNHV-PWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRVESKVRQP 131
L+ V E++ F+RE + +E I R ++PI+ GG++ Y++ L N V+ ++R
Sbjct: 92 LLGTVHDTYEDFTAEDFQREAIRAVESIVQRDRVPIIAGGSNSYIEALVNDCVDFRLRYN 151
Query: 132 -----TESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLEIYYTTGEKPSV 186
+ + +L S + + K VD+ + +++ RR+ Y+ G + ++
Sbjct: 152 CCFLWVDVSRPVLHSFVSERVD---KMVDMGL-----VDEVRRIFDPSSSDYSAGIRRAI 203
Query: 187 TFQQQNTSLKFDTLFFWIYSDPAVLDVRLDNRVDKMMKIGAMEEIMELYEYYKQHNYGQE 246
+ + L+ + + + +L+ ++ ++ + + A ++ ++ YKQ +
Sbjct: 204 GVPELDEFLRSEMRNYPAETTERLLETAIE-KIKENTCLLACRQLQKIQRLYKQWKWNMH 262
Query: 247 QCE 249
+ +
Sbjct: 263 RVD 265
>At3g19160 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 330
Score = 100 bits (248), Expect = 5e-21
Identities = 59/164 (35%), Positives = 95/164 (56%), Gaps = 6/164 (3%)
Query: 13 RPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQRMGIKHH 72
+ KV+VI G TG GKS LSI +A++F+GEI+NSD +Q Y G+ + TN+ I +R G+ HH
Sbjct: 42 KQKVVVIMGATGSGKSCLSIDLATRFSGEIVNSDKIQFYDGLKVTTNQMSILERCGVPHH 101
Query: 73 LMNHVPWNE-EYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRVESKVRQP 131
L+ +P ++ E F +I +I +RG +PI+ GG++ ++ L R + K P
Sbjct: 102 LLGELPPDDSELTTSEFRSLASRSISEITARGNLPIIAGGSNSFIHALLVDRFDPKT-YP 160
Query: 132 TESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLE 175
SE SI + + VD+S++ F ++RV +M+E
Sbjct: 161 FSSETSISSGLRYECCF---LWVDVSVSVLFEYL-SKRVDQMME 200
>At3g63110 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 330
Score = 99.0 bits (245), Expect = 1e-20
Identities = 50/126 (39%), Positives = 80/126 (62%), Gaps = 1/126 (0%)
Query: 4 LLIKSPMMSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPI 63
+L +P + KV+VI G TG GKS LS+ IA++F EIINSD +Q++ G+ I+TNK
Sbjct: 25 MLTLNPYGPKDKVVVIMGATGTGKSRLSVDIATRFRAEIINSDKIQVHQGLDIVTNKITS 84
Query: 64 EQRMGIKHHLMNHVPWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKR 123
E+ G+ HHL+ +P + + +IE + +RGK+PI+VGG++ Y++ L + +
Sbjct: 85 EESCGVPHHLLGVLPPEADLTAANYCHMANLSIESVLNRGKLPIIVGGSNSYVEALVDDK 144
Query: 124 VESKVR 129
E+K R
Sbjct: 145 -ENKFR 149
>At1g25410 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 342
Score = 92.8 bits (229), Expect = 9e-19
Identities = 83/301 (27%), Positives = 130/301 (42%), Gaps = 70/301 (23%)
Query: 13 RPKVIVIAGTTGVGKSDLSIQIASKF-NGEIINSDSMQMYTGIPIITNKHPIEQRMGIKH 71
+ KV++I GTTG GKS LS+ +A++F EIINSD MQ+Y G I+TN P+ ++ G+ H
Sbjct: 44 KDKVVLITGTTGTGKSRLSVDLATRFFPAEIINSDKMQIYKGFEIVTNLIPLHEQGGVPH 103
Query: 72 HLMNHV-PWNEEYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRVESKVRQ 130
HL+ P + E F +I + S K+PIVVGG++ + L +R + +
Sbjct: 104 HLLGQFHPQDGELTPAEFRSLATLSISKLISSKKLPIVVGGSNSFNHALLAERFDPDI-- 161
Query: 131 PTESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLEIYYTTGEKPSVTFQQ 190
D +P +T+
Sbjct: 162 ---------DPFSPGSSLSTI--------------------------------------- 173
Query: 191 QNTSLKFDTLFFWIYSDPAVLDVRLDNRVDKMMKIGAMEEIMELYEYYKQHNYGQEQCEN 250
+ L++ W+ VL L NRVD+M++ G +E++ ELY+
Sbjct: 174 -CSDLRYKCCILWVDVLEPVLFQHLCNRVDQMIESGLVEQLAELYDPVVDSGR-----RL 227
Query: 251 GVWQVIGFKEF------LPWLEESSECDL------NECVEKMKVRTRQYAKRQVKWIRKM 298
GV + IG +EF P + DL E V+ MK RT + K+Q + I K+
Sbjct: 228 GVRKTIGVEEFDRYFRVYPKEMDKGIWDLARKAAYEETVKGMKERTCRLVKKQKEKIMKL 287
Query: 299 L 299
+
Sbjct: 288 I 288
>At3g23630 [J] KOG1384 tRNA delta(2)-isopentenylpyrophosphate transferase
Length = 329
Score = 86.3 bits (212), Expect = 8e-17
Identities = 56/171 (32%), Positives = 91/171 (52%), Gaps = 18/171 (10%)
Query: 6 IKSPMMSRPKVIVIAGTTGVGKSDLSIQIASKFNGEIINSDSMQMYTGIPIITNKHPIEQ 65
+ S + + KVI + G TG GKS L+I +A++F GEIINSD +Q+Y G+ ++TNK ++
Sbjct: 26 VNSFLHPKEKVIFVMGATGSGKSRLAIDLATRFQGEIINSDKIQLYKGLDVLTNKVTPKE 85
Query: 66 RMGIKHHLMNHVPWNE-EYYIHRFERECMETIEDIHSRGKIPIVVGGTHYYLQTLFNKRV 124
G+ HHL+ ++ R + I + + K+PIV GG++ Y++ L N
Sbjct: 86 CRGVPHHLLGVFDSEAGNLTATQYSRLASQAISKLSANNKLPIVAGGSNSYIEALVN--- 142
Query: 125 ESKVRQPTESEKSILDSNNPDLIYNTLKEVDLSIANKFHINDTRRVKRMLE 175
S +L NN D + + +V L + N F ++RV RM+E
Sbjct: 143 --------HSSGFLL--NNYDCCFIWV-DVSLPVLNSF---VSKRVDRMME 179
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,780,965
Number of Sequences: 60738
Number of extensions: 1133692
Number of successful extensions: 3270
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3219
Number of HSP's gapped (non-prelim): 22
length of query: 431
length of database: 30,389,216
effective HSP length: 109
effective length of query: 322
effective length of database: 23,768,774
effective search space: 7653545228
effective search space used: 7653545228
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)