ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1822 check: MH Z KOG0313 Cytoskeleton Microtubule binding protein YTM1 (contains WD40 repeats)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1822 649007 647676 -444
(444 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR272w [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 689 0.0
SPAC890.04c [Z] KOG0313 Microtubule binding protein YTM1 (contai... 338 7e-93
At5g15550 [Z] KOG0313 Microtubule binding protein YTM1 (contains... 183 4e-46
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 169 8e-42
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 168 1e-41
7297759 [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 145 1e-34
CE11196 [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 127 3e-29
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 81 3e-15
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 81 3e-15
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 80 8e-15
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 79 2e-14
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 79 2e-14
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 75 1e-13
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 72 2e-12
7290331 [R] KOG0266 WD40 repeat-containing protein 70 6e-12
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 70 8e-12
At3g49660 [R] KOG0266 WD40 repeat-containing protein 69 1e-11
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 69 1e-11
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 69 1e-11
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 67 7e-11
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 65 2e-10
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 65 3e-10
At5g50120 [R] KOG4155 FOG: WD40 repeat 64 3e-10
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 64 5e-10
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 64 5e-10
SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA... 64 6e-10
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 64 6e-10
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 64 6e-10
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 64 6e-10
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 64 6e-10
At2g32700 [R] KOG0266 WD40 repeat-containing protein 64 6e-10
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 64 6e-10
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 63 1e-09
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 63 1e-09
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 63 1e-09
YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 62 1e-09
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 62 1e-09
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 62 1e-09
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 62 1e-09
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 62 2e-09
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 62 2e-09
At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit 62 2e-09
7302979 [S] KOG0295 WD40 repeat-containing protein 60 9e-09
SPBC32H8.07 [R] KOG0286 G-protein beta subunit 59 1e-08
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 59 1e-08
YMR116c [T] KOG0279 G protein beta subunit-like protein 59 2e-08
CE29339 [S] KOG0295 WD40 repeat-containing protein 59 2e-08
YCR084c [R] KOG0266 WD40 repeat-containing protein 58 2e-08
ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 58 2e-08
CE02186 [R] KOG0286 G-protein beta subunit 58 2e-08
At1g18080 [T] KOG0279 G protein beta subunit-like protein 58 3e-08
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 57 4e-08
Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associat... 57 4e-08
At5g14530 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase comp... 57 4e-08
Hs4557467 [KL] KOG4283 Transcription-coupled repair protein CSA ... 57 6e-08
ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID sub... 57 6e-08
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 57 7e-08
Hs4507283 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 ... 57 7e-08
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 57 7e-08
YPL151c [A] KOG0285 Pleiotropic regulator 1 56 9e-08
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 56 9e-08
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 56 9e-08
CE02005 [R] KOG0288 WD40 repeat protein TipD 56 9e-08
At3g18130 [T] KOG0279 G protein beta subunit-like protein 56 9e-08
7297305 [T] KOG0279 G protein beta subunit-like protein 56 9e-08
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 56 9e-08
Hs4504053 [R] KOG0286 G-protein beta subunit 56 1e-07
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 55 2e-07
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 55 2e-07
Hs11321585 [R] KOG0286 G-protein beta subunit 55 2e-07
At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains D... 55 2e-07
Hs22052079 [R] KOG0266 WD40 repeat-containing protein 55 2e-07
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 55 3e-07
At1g48630 [T] KOG0279 G protein beta subunit-like protein 55 3e-07
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 54 4e-07
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 54 4e-07
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 54 4e-07
Hs11055998 [R] KOG0286 G-protein beta subunit 54 5e-07
7297895 [K] KOG1034 Transcriptional repressor EED/ESC/FIE requir... 54 5e-07
Hs14150011_2 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 54 5e-07
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 54 6e-07
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 54 6e-07
At1g24130 [R] KOG4155 FOG: WD40 repeat 54 6e-07
7299285 [R] KOG4155 FOG: WD40 repeat 54 6e-07
Hs11128017 [D] KOG0642 Cell-cycle nuclear protein contains WD-40... 53 8e-07
YKR036c [R] KOG4155 FOG: WD40 repeat 53 1e-06
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 53 1e-06
At4g15900 [A] KOG0285 Pleiotropic regulator 1 53 1e-06
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 52 1e-06
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 52 1e-06
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 52 1e-06
At4g02730 [R] KOG0266 WD40 repeat-containing protein 52 1e-06
SPBC428.19c [S] KOG0310 Conserved WD40 repeat-containing protein 52 2e-06
SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (c... 52 2e-06
At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i... 52 2e-06
At1g24530 [R] KOG4155 FOG: WD40 repeat 52 2e-06
7303130 [R] KOG0645 WD40 repeat protein 52 2e-06
Hs7662430 [S] KOG0300 WD40 repeat-containing protein 52 2e-06
YKL213c [I] KOG0301 Phospholipase A2-activating protein (contain... 51 3e-06
Hs20357529 [R] KOG0286 G-protein beta subunit 51 3e-06
YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 51 4e-06
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 51 4e-06
Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein 51 4e-06
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 51 4e-06
At4g32551 [R] KOG0266 WD40 repeat-containing protein 51 4e-06
At1g80710 [S] KOG4328 WD40 protein 51 4e-06
7303128 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 ... 51 4e-06
7302600 [R] KOG4155 FOG: WD40 repeat 51 4e-06
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 50 5e-06
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 50 5e-06
7291600 [I] KOG0278 Serine/threonine kinase receptor-associated ... 50 5e-06
CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 50 7e-06
SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 9e-06
At3g42660 [R] KOG1274 WD40 repeat protein 50 9e-06
At3g18860 [I] KOG0301 Phospholipase A2-activating protein (conta... 50 9e-06
>YOR272w [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 460
Score = 689 bits (1778), Expect = 0.0
Identities = 348/460 (75%), Positives = 390/460 (84%), Gaps = 16/460 (3%)
Query: 1 MSTDKTQVKLRFFTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLLELPKSMPFDFLID 60
M+ DK+QVK+RFFTRE+DE LHV D P+YAP+SLKRYGLSEIVNHLL K +PFDFLI+
Sbjct: 1 MTEDKSQVKIRFFTREKDELLHVQDTPMYAPISLKRYGLSEIVNHLLGSEKPVPFDFLIE 60
Query: 61 GELLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVG--SNYIYS 118
GELLRTSL DYL KKGLSSE LNVEYTRA+LPPSYL+SF NEDWVSSLDVG S +I S
Sbjct: 61 GELLRTSLHDYLTKKGLSSEASLNVEYTRAILPPSYLNSFSNEDWVSSLDVGDGSKHIIS 120
Query: 119 GSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSI 178
GSYDGIVRT++LSG V+KQYSGHSGPIRAV YIS+TRLVSAGNDRTLRLWKTKNDDLK
Sbjct: 121 GSYDGIVRTWDLSGNVQKQYSGHSGPIRAVKYISNTRLVSAGNDRTLRLWKTKNDDLKLT 180
Query: 179 ----------DEEEIEDGKTLAILEGHKAPVVSIDVSKD-RILSASCDNTVSLWSTNYKE 227
DE IEDGKTLAILEGHKAPVVSIDVS + RILSAS DN++ WST YKE
Sbjct: 181 SQQQAQEDDDDEVNIEDGKTLAILEGHKAPVVSIDVSDNSRILSASYDNSIGFWSTIYKE 240
Query: 228 MTVIDPMEDLGG---NVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDD 284
MTV+DP+ED+ +STAA+KRRKLT+KDG+IRRRAPL+L ESH+APVE VIFD +D+
Sbjct: 241 MTVVDPLEDINNPNNKISTAARKRRKLTMKDGTIRRRAPLSLLESHTAPVEQVIFDSTDN 300
Query: 285 TVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRV 344
TVGYSVSQDHTIKTWDL+TA+C+DT+TTSYSLLS+AQL LNLLACGSSARHITLHDPRV
Sbjct: 301 TVGYSVSQDHTIKTWDLVTARCIDTRTTSYSLLSIAQLSTLNLLACGSSARHITLHDPRV 360
Query: 345 NSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXX 404
+SSK+TQQQL+GHKNFV +LDTCPENEY++CS SHDGTVKVWDVRS + MYTITRE
Sbjct: 361 GASSKVTQQQLIGHKNFVSSLDTCPENEYILCSGSHDGTVKVWDVRSTSPMYTITREDKS 420
Query: 405 XXXXXXXXXFAVKWAKGVGIISGGQDKKIQINKGDNIFSN 444
FAVKWA+ VGIIS GQDKKIQINKGDNIF N
Sbjct: 421 VQKGVNDKVFAVKWAEKVGIISAGQDKKIQINKGDNIFKN 460
>SPAC890.04c [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 440
Score = 338 bits (868), Expect = 7e-93
Identities = 188/443 (42%), Positives = 266/443 (59%), Gaps = 16/443 (3%)
Query: 2 STDKTQVKLRFFTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLLELPKSMPFDFLIDG 61
S QV++RF TR ED L V D PI+ P SLKRYGLS+IVNHLL+ K PFDFL+ G
Sbjct: 5 SAPSGQVQVRFTTRNED--LAVGDTPIFVPTSLKRYGLSQIVNHLLKTEKPTPFDFLVQG 62
Query: 62 ELLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIYSGSY 121
+LL+T+L +Y+++ GLS+E+ L++EY ++ LPP+YL+SF ++DW+S + + S+ I + SY
Sbjct: 63 QLLKTTLDEYIVQNGLSTESILDIEYIQSTLPPAYLASFSHDDWISGIQLTSDTILTSSY 122
Query: 122 DGIVRTYNLSGKVEKQYSGHSGPIR-AVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDE 180
DGI R ++ SG+++ Q +G ++ A +I + ++A D+ + W + + +D
Sbjct: 123 DGIARVWDKSGEIKFQSTGCGSSLKSASWHIPNQSFLTASLDQKIFHWVIEEPE-SMLDA 181
Query: 181 EEIEDGKTLAILEGHKAPVVSID--VSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLG 238
E+ G + GHK V + S +SAS DNTV +W T ++
Sbjct: 182 EKKSSGILQTLFVGHKDIVERVRSLESSSVFISASADNTVGIWDFERSPETTLESFSS-- 239
Query: 239 GNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKT 298
S + K+RRK R+PL L E H+ PV ++F D +V YSV QDHTIKT
Sbjct: 240 ---SISKKRRRKNAEFTPQAGARSPLILCEGHTGPVMDIVF-SDDPSVAYSVGQDHTIKT 295
Query: 299 WDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGH 358
WDLIT + VD+K T LL V +L L+L+ CGSSARHI +HDPR S KI L GH
Sbjct: 296 WDLITGQNVDSKITKAPLLCVEKLTDLHLVICGSSARHIVVHDPRA-GSDKIVSHTLSGH 354
Query: 359 KNFVVALDTCPENEYMICSASHDGTVKVWDVRSNT-AMYTITREXXXXXXXXXXXXFAVK 417
KN V L PEN YM S SHD T +VWDVR+ + ++YTI+R FAV
Sbjct: 355 KNLVSGLSASPENPYMFASVSHDNTCRVWDVRATSGSIYTISR--AEKTGSQWDKLFAVD 412
Query: 418 WAKGVGIISGGQDKKIQINKGDN 440
W K +GI++GG DK++QIN+ +
Sbjct: 413 WNKSIGIVTGGTDKQLQINQSSS 435
>At5g15550 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 433
Score = 183 bits (465), Expect = 4e-46
Identities = 137/445 (30%), Positives = 217/445 (47%), Gaps = 50/445 (11%)
Query: 13 FTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLLELP----KSMPFDFLIDGELLRTSL 68
F + D V + P ++ R GLS IVN ++E K+ PFDFLIDGEL+R SL
Sbjct: 16 FVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWKTEPFDFLIDGELIRMSL 75
Query: 69 QDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGS-NYIYSGSYDGIVRT 127
+++L+ KG+S+E L +EY RAV P ++DWVS+++ S +I +G YDG+ R
Sbjct: 76 EEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSSPRFILTGCYDGLGRV 135
Query: 128 YNLSGKVEKQYSGHSGPIRAVHYISS-----TRLVSAGNDRTLRLWKTKNDDLKSIDEEE 182
++ +G GHSG I +V ++S + +A DRTLRL+K D +S+D
Sbjct: 136 WSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKF--DPAESVD--S 191
Query: 183 IEDGKTLAILEGHKAPVVSIDVSK--DRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGN 240
+ IL GHKA V S+ K + + S+S D T++LW+TN E
Sbjct: 192 TTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN----------ESTSEG 241
Query: 241 VSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWD 300
S + KKR+ + S + H+ V +V++ + D V YS S DH+++ WD
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHD--VIYSSSWDHSVRRWD 299
Query: 301 LITAKCVDTKTTSYSLLSVAQLPKLN-------LLACGSSARHITLHDPRVNSSSKITQQ 353
V+T S +L L ++ L+A G S + + DPR +S
Sbjct: 300 ------VETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTS-APVF 352
Query: 354 QLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXX 413
Q H +++ A + + + SAS+DG + +WD+R+ + I
Sbjct: 353 QFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVI--------DTHNDKV 404
Query: 414 FAVKWAKGVGIISGGQDKKIQINKG 438
+ W KG ++SGG D ++I+ G
Sbjct: 405 LSADWWKGESVVSGGADSNLRISSG 429
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 169 bits (428), Expect = 8e-42
Identities = 126/438 (28%), Positives = 206/438 (46%), Gaps = 42/438 (9%)
Query: 7 QVKLRFFTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLL----ELPKSMPFDFLIDGE 62
Q++ RF+T +++ V+D P P + + LS I+N LL E K + FDFLI G+
Sbjct: 3 QLQTRFYT--DNKKYAVDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQ 60
Query: 63 LLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIYSGSYD 122
LR L ++ + +SSE + +EY P ++DW+SS+ +I +GSYD
Sbjct: 61 FLRMPLDKHMEMENISSEEVVEIEYVEKYTAPQPEQCMFHDDWISSIKGAEEWILTGSYD 120
Query: 123 GIVRTYNLSGKVEKQYSGHSGPIRAVHYIS----STRLVSAGNDRTLRLWKTKNDDLKSI 178
R ++L GK GH+ ++ V ++ S L+SA D+T+ LW+ ++
Sbjct: 121 KTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW------NV 174
Query: 179 DEEEIEDGKTLAILEGHKAPV--VSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMED 236
+ ++ K L GH V +++D S + S S D + +WST + D ME+
Sbjct: 175 ERNKV---KALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEE--DEMEE 229
Query: 237 LGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTI 296
ST ++++ T + G R P+ H V +V++ +++ S S DHTI
Sbjct: 230 -----STNRPRKKQKTEQLG--LTRTPIVTLSGHMEAVSSVLWSDAEEIC--SASWDHTI 280
Query: 297 KTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLV 356
+ WD+ + T T + ++ P LA GS+ RHI L DPR S + L
Sbjct: 281 RVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGS-LVSLSLT 339
Query: 357 GHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTA-MYTITREXXXXXXXXXXXXFA 415
H +V ++ P +E + S S D VK+WD RS A +Y + +
Sbjct: 340 SHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDL--------AAHEDKVLS 391
Query: 416 VKWAKGVGIISGGQDKKI 433
V W ++SGG D K+
Sbjct: 392 VDWTDTGLLLSGGADNKL 409
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 168 bits (426), Expect = 1e-41
Identities = 126/438 (28%), Positives = 206/438 (46%), Gaps = 42/438 (9%)
Query: 7 QVKLRFFTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLL----ELPKSMPFDFLIDGE 62
Q++ RF+T +++ V+D P P + + LS I+N LL E K + FDFLI G+
Sbjct: 3 QLQTRFYT--DNKKYAVDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQ 60
Query: 63 LLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIYSGSYD 122
LR L ++ + +SSE + +EY P ++DW+SS+ +I +GSYD
Sbjct: 61 FLRMPLDKHMEVENISSEEVVEIEYVEKCTAPQPEQCMFHDDWISSIKGAEEWILTGSYD 120
Query: 123 GIVRTYNLSGKVEKQYSGHSGPIRAVHYIS----STRLVSAGNDRTLRLWKTKNDDLKSI 178
R ++L GK GH+ ++ V ++ S L+SA D+T+ LW+ ++
Sbjct: 121 KTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW------NV 174
Query: 179 DEEEIEDGKTLAILEGHKAPV--VSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMED 236
+ ++ K L GH V +++D S + S S D + +WST + D ME+
Sbjct: 175 ERNKV---KALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEE--DEMEE 229
Query: 237 LGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTI 296
ST ++++ T + G R P+ H V +V++ +++ S S DHTI
Sbjct: 230 -----STNRPRKKQKTEQLG--LTRTPIVTLSGHMEAVSSVLWSDAEEIC--SASWDHTI 280
Query: 297 KTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLV 356
+ WD+ + T T + ++ P LA GS+ RHI L DPR S + L
Sbjct: 281 RVWDVGSGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGS-LVSLSLT 339
Query: 357 GHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTA-MYTITREXXXXXXXXXXXXFA 415
H +V ++ P +E + S S D VK+WD RS A +Y + +
Sbjct: 340 SHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDL--------AAHEDKVLS 391
Query: 416 VKWAKGVGIISGGQDKKI 433
V W ++SGG D K+
Sbjct: 392 VDWTDTGLLLSGGADNKL 409
>7297759 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 420
Score = 145 bits (366), Expect = 1e-34
Identities = 120/448 (26%), Positives = 202/448 (44%), Gaps = 51/448 (11%)
Query: 1 MSTDKTQVKLRFFTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLLELP---KSMPFDF 57
M D + +++ + + E V D P ++ L+ VN LL FDF
Sbjct: 1 MDVDNGEGQVQVHLKTKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTDFDF 60
Query: 58 LIDGELLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIY 117
L+ E LR L D+L +K +S E + +EY P ++DWVS++ +I
Sbjct: 61 LVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGKWIL 120
Query: 118 SGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYIS----STRLVSAGNDRTLRLWKTKND 173
SG YD + + GK SGH+ PI+AV +IS + R VS D+T LW+
Sbjct: 121 SGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQW--- 177
Query: 174 DLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSASCDNTVSLWSTNYKEMTVI 231
++ +E +++ +GH+ V S+ VS D R + S D + +WS
Sbjct: 178 ---NVGSNSVE---CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSA-------- 223
Query: 232 DPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVS 291
+L V ++K+ +K+ + R P + H V AV + D T + S
Sbjct: 224 ----ELDDAVEGSSKR-----MKESGV--RTPKITLQGHRESVSAVQW--MDATTLLTGS 270
Query: 292 QDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLN-LLACGSSARHITLHDPRVNSSSKI 350
DHT+K WDL + + + T+ ++ + A KLN L+ S+ +++ L+DPR N S +
Sbjct: 271 WDHTLKVWDL-SLEGIKTEISTNKSIFDASYSKLNRLILTASADKNLRLYDPRTNQGS-V 328
Query: 351 TQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTA-MYTITREXXXXXXXX 409
+ +GH +V + E++ S ++D K+WD RS A +Y +
Sbjct: 329 VRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDL--------LGH 380
Query: 410 XXXXFAVKWAKGVGIISGGQDKKIQINK 437
+ W+ I+SGG D +++ K
Sbjct: 381 GEKVLDIDWSNPKYIVSGGVDNTVRVFK 408
>CE11196 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 439
Score = 127 bits (319), Expect = 3e-29
Identities = 111/411 (27%), Positives = 181/411 (44%), Gaps = 45/411 (10%)
Query: 2 STDKTQVKLRFFTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLLELP----KSMPFDF 57
S ++ V++ FF+++E E + DA P + ++ ++N +E K F+F
Sbjct: 15 SINQKHVQITFFSKDE-EIPQIPDAVFDVPTGAECDDMNLLLNKTIEANDGAWKERRFEF 73
Query: 58 LIDGELLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIY 117
L+ LRTSL +++ + + +ET L VE + P L DWVSS+ + + +I+
Sbjct: 74 LVGETFLRTSLAEFIEEYEVETETILKVECVIGIEAPKPLHDIQAPDWVSSVQIANGHIF 133
Query: 118 SGSYDGIVRTYNLSGKVEKQYSGHSGPIRAV----------HYISSTRLVSAGNDRTLRL 167
S +Y G + + GK K + + + + T V G ++ L L
Sbjct: 134 STTYGGDIVIVDRKGKETKLAVNSANRLLKCISIVKAPSKKNQLDGTEFVVGGENQLLTL 193
Query: 168 WKTKNDDLKSIDEEEIEDGKTLA--ILEGHKAPVVSIDVSKD--RILSASCDNTVSLWST 223
+ IE G + IL GH+ V + V+ D R +S S D + +W+
Sbjct: 194 YA-------------IEKGALVEKLILRGHERAVECVSVNSDSTRAISGSVDTNLKIWNL 240
Query: 224 NYK-EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKS 282
+ E T + E+ +AKKRRK K + P+ H V AV +
Sbjct: 241 DASDEATTYEKEEE-----EESAKKRRKKETKT-----KVPMVTIGGHRDKVSAVEWCPW 290
Query: 283 DDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDP 342
+ +S S DHTI WDL A + S S+ PK +LL + L+DP
Sbjct: 291 NSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSFTSIDLHPKSDLLISSCTDAIPRLYDP 350
Query: 343 RVNSSSKITQQQLVGHKN-FVVALDTCPENEYMICSASHDGTVKVWDVRSN 392
+ N + +Q +GH+N +V A+ P + S S D T K+WDVRS+
Sbjct: 351 K-NRDGSMVKQSFIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWDVRSS 400
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 81.3 bits (199), Expect = 3e-15
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 58/287 (20%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V S + N I SGS D ++ +N +G+ GH+ +R +H + R+VS D T
Sbjct: 424 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDAT 482
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
LR+W +IE G+ L +L GH A V + R++S + D V +W
Sbjct: 483 LRVW-------------DIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW--- 526
Query: 225 YKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDD 284
DP L + H+ V ++ FD
Sbjct: 527 -------DP-------------------------ETETCLHTLQGHTNRVYSLQFDGIHV 554
Query: 285 TVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRV 344
G S D +I+ WD+ T C+ T T SL S +L K N+L G++ + + D +
Sbjct: 555 VSG---SLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWDIKT 610
Query: 345 NSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRS 391
Q L G A+ N+ + ++S DGTVK+WD+++
Sbjct: 611 GQ----CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 653
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 81.3 bits (199), Expect = 3e-15
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 58/287 (20%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V S + N I SGS D ++ +N +G+ GH+ +R +H + R+VS D T
Sbjct: 344 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDAT 402
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
LR+W +IE G+ L +L GH A V + R++S + D V +W
Sbjct: 403 LRVW-------------DIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW--- 446
Query: 225 YKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDD 284
DP L + H+ V ++ FD
Sbjct: 447 -------DP-------------------------ETETCLHTLQGHTNRVYSLQFDGIHV 474
Query: 285 TVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRV 344
G S D +I+ WD+ T C+ T T SL S +L K N+L G++ + + D +
Sbjct: 475 VSG---SLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWDIKT 530
Query: 345 NSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRS 391
Q L G A+ N+ + ++S DGTVK+WD+++
Sbjct: 531 GQ----CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 573
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 79.7 bits (195), Expect = 8e-15
Identities = 80/310 (25%), Positives = 134/310 (42%), Gaps = 41/310 (13%)
Query: 104 DWVSSLDVGSNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHYISSTRLVSAGND 162
D V +L +++GSYD + ++L +GK+ ++ SGHS ++ + Y +L++ D
Sbjct: 303 DGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTL-YFDDRKLITGSLD 361
Query: 163 RTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWS 222
+T+R+W G+ ++ GH V+S+D + I+S S D TV +W
Sbjct: 362 KTIRVWNYIT-------------GECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWH 408
Query: 223 TNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGS------IRRRAPLALFESHSAPVEA 276
+ + + V K + D + IR + L +F H V+
Sbjct: 409 VESRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQK 468
Query: 277 VI--------FDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLP-KLNL 327
+I +D+T S QD T A DT + + +P +L
Sbjct: 469 IIPLTIKDVENLATDNTSDGSSPQDDPTMTDG---ADESDTPSNEQETVLDENIPYPTHL 525
Query: 328 LACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVW 387
L+CG I L D + + K + Q GH V D +N + I S SHDG++KVW
Sbjct: 526 LSCGLD-NTIKLWDVK---TGKCIRTQF-GHVEGV--WDIAADN-FRIISGSHDGSIKVW 577
Query: 388 DVRSNTAMYT 397
D++S M+T
Sbjct: 578 DLQSGKCMHT 587
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 78.6 bits (192), Expect = 2e-14
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 61/289 (21%)
Query: 105 WVSSLDVGSNYIYSGSYDGIVRTYN-LSGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDR 163
W S + YI SGS D V+ ++ + G + GH+ +R + S LV+ D
Sbjct: 298 WTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI-LVTGSRDT 356
Query: 164 TLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWST 223
TLR+W ++E G+ LA L GH A V + ++S D TV +W+
Sbjct: 357 TLRVW-------------DVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNA 403
Query: 224 NYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSD 283
+ + R LT H+ V +++F+ S+
Sbjct: 404 H-------------------TGRCIRTLT----------------GHNNRVYSLLFE-SE 427
Query: 284 DTVGYSVSQDHTIKTWDLITAK---CVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLH 340
++ S S D +I+ WD + CV SL S QL L++C + + H+ +
Sbjct: 428 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADS-HVRVW 486
Query: 341 DPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDV 389
D ++ + + L GH++ + +L N M+ ++S DGTVK+WD+
Sbjct: 487 D--IHEGTCV--HMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDI 529
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 78.6 bits (192), Expect = 2e-14
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 61/289 (21%)
Query: 105 WVSSLDVGSNYIYSGSYDGIVRTYN-LSGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDR 163
W S + YI SGS D V+ ++ + G + GH+ +R + S LV+ D
Sbjct: 300 WTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI-LVTGSRDT 358
Query: 164 TLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWST 223
TLR+W ++E G+ LA L GH A V + ++S D TV +W+
Sbjct: 359 TLRVW-------------DVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNA 405
Query: 224 NYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSD 283
+ + R LT H+ V +++F+ S+
Sbjct: 406 H-------------------TGRCIRTLT----------------GHNNRVYSLLFE-SE 429
Query: 284 DTVGYSVSQDHTIKTWDLITAK---CVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLH 340
++ S S D +I+ WD + CV SL S QL L++C + + H+ +
Sbjct: 430 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADS-HVRVW 488
Query: 341 DPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDV 389
D ++ + + L GH++ + +L N M+ ++S DGTVK+WD+
Sbjct: 489 D--IHEGTCV--HMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDI 531
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 75.5 bits (184), Expect = 1e-13
Identities = 83/321 (25%), Positives = 139/321 (42%), Gaps = 50/321 (15%)
Query: 85 VEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGP 144
V +T AV S + N +W++S I G+YDG K EK GH+
Sbjct: 38 VGHTEAV---SSVKFSPNGEWLASSSADRLIIIWGAYDG---------KYEKTLYGHNLE 85
Query: 145 IRAVHYIS-STRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPV--VS 201
I V + S S+RLVSA +D+TL+LW ++ GK L L+GH V +
Sbjct: 86 ISDVAWSSDSSRLVSASDDKTLKLW-------------DVRSGKCLKTLKGHSNYVFCCN 132
Query: 202 IDVSKDRILSASCDNTVSLWSTN----YKEMTV-IDPME----DLGGNVSTAAKKRRKLT 252
+ + I+S S D TV +W K ++ DP+ + G++ +
Sbjct: 133 FNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCR 192
Query: 253 LKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT--- 309
+ D + + L + + PV V F + + + + D+T+K WD +C+ T
Sbjct: 193 IWDAA-SGQCLKTLVDDDNPPVSFVKFSPNGKYI-LTATLDNTLKLWDYSRGRCLKTYTG 250
Query: 310 -KTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTC 368
K Y + + + + GS + + N +K Q+L GH + V++ C
Sbjct: 251 QKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW----NLQTKEIVQKLQGHTDVVISA-AC 305
Query: 369 PENEYMICSAS--HDGTVKVW 387
E +I SA+ +D T+K+W
Sbjct: 306 HPTENLIASAALENDKTIKLW 326
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 72.0 bits (175), Expect = 2e-12
Identities = 59/219 (26%), Positives = 98/219 (43%), Gaps = 32/219 (14%)
Query: 102 NEDWVSSLDVGSNYIYSGSYDGIVRTYNLSG-KVEKQYSGHSGPIRAVHYISSTRLVSAG 160
+ D V L + N + SGSYD +R +NL+ + GHS + + + +L+S
Sbjct: 272 HSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF-DQCKLISGS 330
Query: 161 NDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSL 220
D+T+R+W + + ++IL GH V+ + ++S S D TV L
Sbjct: 331 MDKTIRIWNYRTSE-------------CISILHGHTDSVLCLTFDSTLLVSGSADCTVKL 377
Query: 221 WS-TNYKEMTV---------IDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESH 270
W + K +T+ + + D G +S + T+K S+ L F +H
Sbjct: 378 WHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDS----TIKIWSLETNTCLHTFSAH 433
Query: 271 SAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT 309
PV+++ D+ +S S D TIK WD+ KCV T
Sbjct: 434 IGPVQSLAL---ADSRLFSCSLDGTIKQWDIEKKKCVHT 469
Score = 61.2 bits (147), Expect = 3e-09
Identities = 63/258 (24%), Positives = 99/258 (37%), Gaps = 35/258 (13%)
Query: 139 SGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAP 198
SGHS + + + + L S D T+RLW + + +A+LEGH +
Sbjct: 270 SGHSDGVMCLQLVRNI-LASGSYDATIRLWN-------------LATFQQVALLEGHSSG 315
Query: 199 VVSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSI 258
V + + +++S S D T+ +W NY+ I + G S L GS
Sbjct: 316 VTCLQFDQCKLISGSMDKTIRIW--NYRTSECISILH--GHTDSVLCLTFDSTLLVSGSA 371
Query: 259 RRRAPLALF--------ESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTK 310
L F H+ PV +V + D + S S D TIK W L T C+ T
Sbjct: 372 DCTVKLWHFSGGKRITLRGHTGPVNSVRIIR-DRGLVLSGSDDSTIKIWSLETNTCLHTF 430
Query: 311 TTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPE 370
+ + L L +C T+ + + L GH + +
Sbjct: 431 SAHIGPVQSLALADSRLFSCSLDG---TIKQWDIEKKKCV--HTLFGH---IEGVWEIAA 482
Query: 371 NEYMICSASHDGTVKVWD 388
+ + S +HDG VKVW+
Sbjct: 483 DHLRLISGAHDGVVKVWE 500
Score = 57.4 bits (137), Expect = 4e-08
Identities = 53/201 (26%), Positives = 83/201 (40%), Gaps = 22/201 (10%)
Query: 104 DWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTRLVSAG-ND 162
D V L S + SGS D V+ ++ SG GH+GP+ +V I LV +G +D
Sbjct: 354 DSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDD 413
Query: 163 RTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWS 222
T+++W +E L H PV S+ ++ R+ S S D T+ W
Sbjct: 414 STIKIW-------------SLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWD 460
Query: 223 TNYKEMTVIDPMEDLGGNVSTAAKKRRKLT-LKDGSIR---RRAPLALFESHSAPVEAVI 278
K+ V + G AA R ++ DG ++ + ++HS PV +V
Sbjct: 461 IE-KKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVA 519
Query: 279 FDKSDDTVGYSVSQDHTIKTW 299
+ G S+D I W
Sbjct: 520 LGDCEVVSG---SEDGKIYLW 537
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 70.1 bits (170), Expect = 6e-12
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 50/319 (15%)
Query: 87 YTRAVLPPSYLSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIR 146
+T+AV S + N +W++S G+YDG K EK SGH I
Sbjct: 71 HTKAV---SAVKFSPNGEWLASSSADKLIKIWGAYDG---------KFEKTISGHKLGIS 118
Query: 147 AVHYISSTR-LVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPV--VSID 203
V + S +R LVS +D+TL++W E+ GK+L L+GH V + +
Sbjct: 119 DVAWSSDSRLLVSGSDDKTLKVW-------------ELSTGKSLKTLKGHSNYVFCCNFN 165
Query: 204 VSKDRILSASCDNTVSLWSTNYKEMTVI-----DPME----DLGGNVSTAAKKRRKLTLK 254
+ I+S S D +V +W + DP+ + G++ ++ +
Sbjct: 166 PQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Query: 255 DGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT----K 310
D + + L + + PV V F + + + + D+T+K WD KC+ T K
Sbjct: 226 D-TASGQCLKTLIDDDNPPVSFVKFSPNGKYI-LAATLDNTLKLWDYSKGKCLKTYTGHK 283
Query: 311 TTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPE 370
Y + + + + GS + + N SK Q+L GH + V+ C
Sbjct: 284 NEKYCIFANFSVTGGKWIVSGSEDNMVYIW----NLQSKEVVQKLQGHTDTVLC-TACHP 338
Query: 371 NEYMICSAS--HDGTVKVW 387
E +I SA+ +D T+K+W
Sbjct: 339 TENIIASAALENDKTIKLW 357
Score = 50.8 bits (120), Expect = 4e-06
Identities = 38/127 (29%), Positives = 58/127 (44%), Gaps = 12/127 (9%)
Query: 97 LSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHY-ISST 154
L N + + + SN I SGS+D VR +++ +GK K HS P+ AVH+ +
Sbjct: 152 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS 211
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
+VS+ D R+W T + KTL + V + IL+A+
Sbjct: 212 LIVSSSYDGLCRIWDTASGQCL----------KTLIDDDNPPVSFVKFSPNGKYILAATL 261
Query: 215 DNTVSLW 221
DNT+ LW
Sbjct: 262 DNTLKLW 268
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 69.7 bits (169), Expect = 8e-12
Identities = 81/330 (24%), Positives = 130/330 (38%), Gaps = 70/330 (21%)
Query: 110 DVGSNYIYSGSYDGIVRTYNLSGKVEK-QYSGHSGPIRAVHYISSTRLVSAGNDRTLRLW 168
D G + SGS D VR +N+ + SGH+ PI V + + S+ D+T+R+W
Sbjct: 236 DSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIW 295
Query: 169 KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTNYKEM 228
K DGK L IL+GH A V + +S + +L + + T++K
Sbjct: 296 DAK-------------DGKCLHILKGHAARVNHLSLSTEHVLRSGAYD-----HTDFKPK 337
Query: 229 TVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGY 288
+ D AK+R + LK R S S ++ +++D T
Sbjct: 338 SFSDERRK--------AKERYEACLKQSGER-------LVSASDDLQLILWDPQKSTKPI 382
Query: 289 SVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSS 348
+ H K +++ S P +A S + L D +
Sbjct: 383 TKMHGHQ--------------KVVNHASFS----PDGRCIATASFDSSVRLWDGK----- 419
Query: 349 KITQQQLVGHKNFVVALDTCP--ENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXX 406
T + L + V A+ C + ++ S+S D T+KVWDVRS + +
Sbjct: 420 --TGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLP------- 470
Query: 407 XXXXXXXFAVKWA-KGVGIISGGQDKKIQI 435
FAV W+ G + SGG DK ++I
Sbjct: 471 -GHEDQVFAVDWSPDGQRVASGGADKAVRI 499
Score = 50.4 bits (119), Expect = 5e-06
Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 18/178 (10%)
Query: 265 ALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLS-VAQLP 323
A H + + F S + + S D T + WD T + T + +S VA P
Sbjct: 128 ASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAP 187
Query: 324 KLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCP------ENEYMICS 377
+++A GS I DP+ S L H ++AL P Y++ S
Sbjct: 188 DASIIATGSMDNTIRFWDPKKGSP---IGDALRRHTKPIMALCWQPLHLAPDSGPYLLAS 244
Query: 378 ASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAKGVGIISGGQDKKIQI 435
S D TV++W+V+ T ++T++ V+W I S DK I+I
Sbjct: 245 GSKDNTVRIWNVKLRTLLFTLSGHTAPIT--------CVRWGGQNWIYSSSYDKTIRI 294
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 69.3 bits (168), Expect = 1e-11
Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 48/308 (15%)
Query: 106 VSSLDVGSN--YIYSGSYDGIVRTYNLS------GKVEKQYSGHSGPIRAVHYISSTR-L 156
VSS+ S+ + S S D +RTY ++ + ++++GH I V + S R +
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFI 86
Query: 157 VSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHK--APVVSIDVSKDRILSASC 214
VSA +D+TL+LW ++E G + L GH A V+ + + I+S S
Sbjct: 87 VSASDDKTLKLW-------------DVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 215 DNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTL-----KDGSIR------RRAP 263
D TV +W + + P + TA R +L DG R
Sbjct: 134 DETVRIWDVTTGKCLKVLPAH---SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 264 LALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKT----TSYSLLSV 319
L + + PV V F + + + D+T++ W++ +AK + T T Y + S
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVG-TLDNTLRLWNISSAKFLKTYTGHVNAQYCISSA 249
Query: 320 AQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSAS 379
+ + GS + + + +SK Q+L GH V+ + C E +I S S
Sbjct: 250 FSVTNGKRIVSGSEDNCVHMWE----LNSKKLLQKLEGHTETVMNV-ACHPTENLIASGS 304
Query: 380 HDGTVKVW 387
D TV++W
Sbjct: 305 LDKTVRIW 312
Score = 52.4 bits (124), Expect = 1e-06
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 41/211 (19%)
Query: 192 LEGHKAPVVSIDVSKD-RIL-SASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRR 249
L H V S+ S D R+L SAS D T+ ++ N T+ DP+ +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTIN----TINDPIAE------------- 62
Query: 250 KLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT 309
P+ F H + V F SD S S D T+K WD+ T + T
Sbjct: 63 -------------PVQEFTGHENGISDVAFS-SDARFIVSASDDKTLKLWDVETGSLIKT 108
Query: 310 KT--TSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDT 367
T+Y+ V P+ N++ GS + + D K+ L H + V A+D
Sbjct: 109 LIGHTNYAFC-VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV----LPAHSDPVTAVDF 163
Query: 368 CPENEYMICSASHDGTVKVWDVRSNTAMYTI 398
+ +I S+S+DG ++WD + + T+
Sbjct: 164 NRDGS-LIVSSSYDGLCRIWDSGTGHCVKTL 193
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 68.9 bits (167), Expect = 1e-11
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 36/268 (13%)
Query: 154 TRLVSAGNDRT-LRLWKTKNDDLKS----------------IDEEEIED---GKTLAILE 193
++L++AG D + ++LW ++ LKS ++EE+ ED G + IL
Sbjct: 280 SKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILR 339
Query: 194 GHKAPVVSIDVSKDR--ILSASCDNTVSLWSTNYKEMTVI-----DPMEDLGGNVSTA-- 244
GH PV S D +LS S D ++ W TV+ P+ DL + +
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYF 399
Query: 245 AKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITA 304
A T + S R PL ++ H A V+ V F + + + + S D T++ W
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA-TGSTDKTVRLWSAQQG 458
Query: 305 KCVDTKTTSYS-LLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVV 363
V T +LS+A P LA + + L D +S ++L GH + +
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD----LASGTLYKELRGHTDNIT 514
Query: 364 ALDTCPENEYMICSASHDGTVKVWDVRS 391
+L P++ +I SAS D +V+VWD+R+
Sbjct: 515 SLTFSPDSG-LIASASMDNSVRVWDIRN 541
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 68.9 bits (167), Expect = 1e-11
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 39/274 (14%)
Query: 136 KQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGH 195
K GH + S R+VS +D TL++W N GK L L GH
Sbjct: 988 KVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVN-------------GKCLRTLVGH 1034
Query: 196 KAPVVSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVST----------AA 245
V S +S + I+S S D T+ +W +M + L G+ ST
Sbjct: 1035 TGGVWSSQMSGNIIISGSTDRTLKVW-----DMDSGACVHTLQGHTSTVRCMHLHGSKVV 1089
Query: 246 KKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAK 305
R TL+ I + + L + H A V V + D + S + D+ +K W +
Sbjct: 1090 SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY---DGKLIVSGAYDYMVKIWHPERQE 1146
Query: 306 CVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVAL 365
C+ T + + Q L++++ GS I + D + + L+GH++ +
Sbjct: 1147 CLHTLQGHTNRVYSLQFDGLHVVS-GSLDTSIRVWDVETGN----CKHTLMGHQSLTSGM 1201
Query: 366 DTCPENEYMICSASHDGTVKVWDVRSNTAMYTIT 399
+ + ++ S + D TVKVWD+ + + T++
Sbjct: 1202 EL---RQNILVSGNADSTVKVWDITTGQCLQTLS 1232
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 66.6 bits (161), Expect = 7e-11
Identities = 72/303 (23%), Positives = 123/303 (39%), Gaps = 68/303 (22%)
Query: 89 RAVLPPSYLSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNLSGK--VEKQYSGHSGPIR 146
RA L Y +D+E VS GS D V ++++ + + K Y GHSG +
Sbjct: 218 RATLDSVYCVQYDDEIMVS-----------GSKDRTVSVWDVNSRFILYKLY-GHSGSVL 265
Query: 147 AVHYISSTRL-VSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVS 205
+ + L VS +D T+ +W +N + L + GH V+ + VS
Sbjct: 266 CLDFCRRRNLLVSGSSDSTIIIWDWQNR-------------RPLKVYFGHTDNVLGVVVS 312
Query: 206 KDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLA 265
++ I+S+S D+T +W D + A +
Sbjct: 313 ENYIISSSRDHTARVWRL-------------------------------DATSPAEACMH 341
Query: 266 LFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKL 325
+ H A V +V + + + S D T++TWD+ T C+ ++ AQ
Sbjct: 342 VLRGHLASVNSVQYSSKTGLI-VTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY-NG 399
Query: 326 NLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVK 385
+ GSS I + + SS K+ + L GH++ + T N+ I S +DGTV+
Sbjct: 400 KFIVSGSSDLTIRIFEA---SSGKLL-RMLQGHEDLI---RTVRFNDEKIVSGGYDGTVR 452
Query: 386 VWD 388
+W+
Sbjct: 453 IWN 455
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 65.5 bits (158), Expect = 2e-10
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 63/290 (21%)
Query: 116 IYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHYISSTRLVSAGN-DRTLRLWKTKND 173
I +GS+D + +++ +GK + GH+ I + + + LV+ G+ D T +LW
Sbjct: 67 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW----- 121
Query: 174 DLKSIDEEEIEDGKTLAILEGHKAPVVSI--DVSKDRILSASCDNTVSLWSTNYKEMTVI 231
+I++G+ + L GH A ++S+ + S DRI++ S D+TV +W
Sbjct: 122 --------DIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA-------- 165
Query: 232 DPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVS 291
D G RK+ + G H A + + F+ D ++ + S
Sbjct: 166 ----DTG----------RKVNILIG-------------HCAEISSASFNW-DCSLILTGS 197
Query: 292 QDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKIT 351
D T K WD KCV T T + + L +SA D S T
Sbjct: 198 MDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASA------DGTARIFSAAT 251
Query: 352 QQ---QLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTI 398
++ +L GH+ + + P+ +++ + S D T ++WD ++ + +
Sbjct: 252 RKCIAKLEGHEGEISKISFNPQGNHLL-TGSSDKTARIWDAQTGQCLQVL 300
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 64.7 bits (156), Expect = 3e-10
Identities = 76/294 (25%), Positives = 119/294 (39%), Gaps = 69/294 (23%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V L I SGS D VR ++++ G++ H + + + ++ +V+ DR+
Sbjct: 253 VLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF-NNGMMVTCSKDRS 311
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
+ +W D+ S E + +L GH+A V +D + I+SAS D T+ +WST+
Sbjct: 312 IAVW-----DMTSPSEITLR-----RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTS 361
Query: 225 YKEMTVIDPMEDLGGNVSTAA--KKRRKLTL---KDGSIRR-----RAPLALFESHSAPV 274
E + L G+ A + R +L + D SIR A L + E H V
Sbjct: 362 SCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELV 416
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSA 334
+ FD G + D IK WDL+ A
Sbjct: 417 RCIRFDTKRIVSG---AYDGKIKVWDLVAAL----------------------------- 444
Query: 335 RHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
DPR +S+ + LV H V L +E+ I S+SHD T+ +WD
Sbjct: 445 ------DPRA-ASNTLCLNTLVEHTGRVFRLQF---DEFQIVSSSHDDTILIWD 488
Score = 64.7 bits (156), Expect = 3e-10
Identities = 68/246 (27%), Positives = 104/246 (41%), Gaps = 38/246 (15%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
++VS D T+++W D +++ KTL GH V+ + I+S S
Sbjct: 222 KIVSGLRDNTIKIW----------DRTDLQCVKTLM---GHTGSVLCLQYDDKVIISGSS 268
Query: 215 DNTVSLWSTNYKEM--TVIDPMEDL-----GGNVSTAAKKRRKLTLKDGSIRRRAPL-AL 266
D+TV +W N EM T+I E + + K R + + D + L +
Sbjct: 269 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRV 328
Query: 267 FESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLP-KL 325
H A V V F D+ S S D TIK W T+ C +T + +A L +
Sbjct: 329 LVGHRAAVNVVDF---DEKYIVSASGDRTIKVWS--TSSCEFVRTLNGHKRGIACLQYRD 383
Query: 326 NLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFV--VALDTCPENEYMICSASHDGT 383
L+ GSS I L D + ++ L GH+ V + DT I S ++DG
Sbjct: 384 RLVVSGSSDNSIRLWDIECGACLRV----LEGHEELVRCIRFDT-----KRIVSGAYDGK 434
Query: 384 VKVWDV 389
+KVWD+
Sbjct: 435 IKVWDL 440
>At5g50120 [R] KOG4155 FOG: WD40 repeat
Length = 388
Score = 64.3 bits (155), Expect = 3e-10
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 25/253 (9%)
Query: 151 ISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRIL 210
++ RL + ND +RLW L+++ E +G + G V S+ + D++
Sbjct: 46 LAGKRLYTGSNDGVVRLWNANT--LETLAEAS-SNGDVITGERGGGGAVKSLVILADKLF 102
Query: 211 SASCDNTVSLWSTNYKEMTVIDPMEDLGGN-------VSTAAKKRRKLTLKDGSIR-RRA 262
+A D+ + +W N V++ ED+GG + T + + K + + RR
Sbjct: 103 TAHQDHKIRVWKIN----DVVE--EDVGGKKYMHLATMPTISDRFAKCLMPKNQVEIRRH 156
Query: 263 PLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSY-SLLSVAQ 321
A + H V + + D T+ YSVS D T+K W KC+++ T ++ ++
Sbjct: 157 KKASWVHHVDAVSGLALSR-DGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVA 215
Query: 322 LPKLNLLACGSSARHITLHDPRVNSSS--KITQQQLVG----HKNFVVALDTCPENEYMI 375
L + + GSS + I + +N + K + LV H + + AL N ++
Sbjct: 216 LSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLL 275
Query: 376 CSASHDGTVKVWD 388
S DG++ VW+
Sbjct: 276 HSGGSDGSILVWE 288
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 63.9 bits (154), Expect = 5e-10
Identities = 71/258 (27%), Positives = 113/258 (43%), Gaps = 28/258 (10%)
Query: 155 RLVSAG-NDRTLRLWKTKNDDLKS----IDEEEIEDGKTLAILEGHKAPVVSIDVSKDR- 208
R+ +AG D +++W L + ++ + ++ T L GH V S S D
Sbjct: 479 RIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNK 538
Query: 209 -ILSASCDNTVSLWSTNYKEMTVI-----DPMED-----LGGNVSTAAKKRRKLTLKDGS 257
+LS S D TV LWS + V P+ D LG +TA+ + T + S
Sbjct: 539 YLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQ---TARLWS 595
Query: 258 IRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYS-L 316
PL +F H V+ V F + V ++ S D T + WD+ T V + +
Sbjct: 596 CDHIYPLRIFAGHLNDVDCVSFHPNGCYV-FTGSSDKTCRMWDVSTGDSVRLFLGHTAPV 654
Query: 317 LSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGH-KNFVVALDTCPENEYMI 375
+S+A P L+ GS I + D + + ++ Q + GH KN + +L E +I
Sbjct: 655 ISIAVCPDGRWLSTGSEDGIINVWD--IGTGKRLKQMR--GHGKNAIYSLSYSKEGNVLI 710
Query: 376 CSASHDGTVKVWDVRSNT 393
S D TV+VWD++ T
Sbjct: 711 -SGGADHTVRVWDLKKAT 727
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 63.9 bits (154), Expect = 5e-10
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 42/250 (16%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
++VS D T+++W K D IL GH V+ + I+S S
Sbjct: 234 KIVSGLRDNTIKIWDRK-------------DYSCSRILSGHTGSVLCLQYDNRVIISGSS 280
Query: 215 DNTVSLWSTNYKE--MTVIDPMEDL------GGNVSTAAKKRR-----KLTLKDGSIRRR 261
D TV +W E T+I E + G + T +K R ++ +D +IRR
Sbjct: 281 DATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRR- 339
Query: 262 APLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQ 321
+ H A V V F DD S S D TIK W + T + V T ++ Q
Sbjct: 340 ----VLVGHRAAVNVVDF---DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ 392
Query: 322 LPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHD 381
+ L+ GSS I L D S + + L GH+ V + +E I S ++D
Sbjct: 393 Y-RGRLVVSGSSDNTIRLWD----IHSGVCLRVLEGHEELVRCIRF---DEKRIVSGAYD 444
Query: 382 GTVKVWDVRS 391
G +KVWD+++
Sbjct: 445 GKIKVWDLQA 454
Score = 58.9 bits (141), Expect = 1e-08
Identities = 73/294 (24%), Positives = 112/294 (37%), Gaps = 69/294 (23%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V L + I SGS D VR +++ +G+ K H + + + + +V+ DR+
Sbjct: 265 VLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI-MVTCSKDRS 323
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
+ +W D D +L GH+A V +D I+SAS D T+ +WS
Sbjct: 324 IAVW----------DMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWS-- 371
Query: 225 YKEMTVIDPMEDLGGNVSTAA--KKRRKLTLKDGS--------IRRRAPLALFESHSAPV 274
M ++ + L G+ A + R +L + S I L + E H V
Sbjct: 372 ---MDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELV 428
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSA 334
+ FD+ G + D IK WDL A
Sbjct: 429 RCIRFDEKRIVSG---AYDGKIKVWDLQAAL----------------------------- 456
Query: 335 RHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
DPR SS+I LV H V L +++ I S+SHD T+ +WD
Sbjct: 457 ------DPRA-LSSEICLCSLVQHTGRVFRLQF---DDFQIVSSSHDDTILIWD 500
>SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 404
Score = 63.5 bits (153), Expect = 6e-10
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 269 SHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLN-- 326
SH + + + D+ + S S DHT+K WD+ T + T T + S A P +
Sbjct: 101 SHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHC 160
Query: 327 LLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKV 386
L+A + I L D + S + L GH V+A+D CP+NE+++ S S DGT ++
Sbjct: 161 LIATAYRSSSIRLCDMQSGSYT----HSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRL 216
Query: 387 WDVRSNTAMY 396
WD+R ++ +
Sbjct: 217 WDIRKVSSSF 226
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 63.5 bits (153), Expect = 6e-10
Identities = 78/317 (24%), Positives = 127/317 (39%), Gaps = 76/317 (23%)
Query: 102 NEDWVSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRL---- 156
+++ V ++ + N + SGS D VR +N+ K + GH IR + + +RL
Sbjct: 390 HKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHG 449
Query: 157 -----------VSAGNDRTLRLWKT-KN-------DDLKSIDEEEIEDGKTLAILEGHKA 197
VS D TLR+WK KN D+ SID E ++ + L GH
Sbjct: 450 VEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWE-KNPYFVHTLIGHTD 508
Query: 198 PVVSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGS 257
V +I D ++S S D+++ +W + E
Sbjct: 509 SVRTISGYGDILVSGSYDSSIRIWRVSTGEC----------------------------- 539
Query: 258 IRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKC---VDTKTTSY 314
L HS + +V+++ + + S S D +I+ WDL T C ++
Sbjct: 540 ------LYHLRGHSLRIYSVLYEP-ERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFV 592
Query: 315 SLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYM 374
+LL+V Q N L GS+ I + D + +FV +E+
Sbjct: 593 TLLNVFQ----NRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFV-------SDEHK 641
Query: 375 ICSASHDGTVKVWDVRS 391
I S + DG+VK+WDVR+
Sbjct: 642 IISGN-DGSVKLWDVRT 657
Score = 59.3 bits (142), Expect = 1e-08
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 18/159 (11%)
Query: 104 DWVSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGN- 161
D V ++ + + SGSYD +R + +S G+ GHS I +V Y + +G+
Sbjct: 508 DSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSM 567
Query: 162 DRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLW 221
D+++R+W ++ G +LEGH A V ++V ++R++S S D+T+ +W
Sbjct: 568 DKSIRVW-------------DLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIW 614
Query: 222 STNYKEMTVIDPMEDLGGNVSTAAKKRRK-LTLKDGSIR 259
N + ++ P G +S+ K ++ DGS++
Sbjct: 615 DLNTGKPLMVLPSN--SGYISSFVSDEHKIISGNDGSVK 651
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 63.5 bits (153), Expect = 6e-10
Identities = 64/255 (25%), Positives = 99/255 (38%), Gaps = 55/255 (21%)
Query: 139 SGHSGPIRAVHYI-SSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKA 197
SGH G + + + + L SAG DR + LW D A L+GH
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC------------DNYATLKGHSG 110
Query: 198 PVVSIDVSKD--RILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKD 255
V+ + + D + SAS D TV++W + E KR K
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERV-----------------KRLK----- 148
Query: 256 GSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYS 315
H++ V + + + + S D T+K WD+ + T +Y
Sbjct: 149 -------------GHTSFVNSCYPARKSPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ 195
Query: 316 LLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMI 375
+L+V + + G I + D R N K+T + GH + V L E Y++
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYT-MRGHADSVTGLSLSSEGSYLL 251
Query: 376 CSASHDGTVKVWDVR 390
+A D TV+VWDVR
Sbjct: 252 SNAM-DNTVRVWDVR 265
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 63.5 bits (153), Expect = 6e-10
Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
++VS D T+++W + K I L GH V+ + + I++ S
Sbjct: 279 KIVSGLRDNTIKIWDKNTLECKRI-------------LTGHTGSVLCLQYDERVIITGSS 325
Query: 215 DNTVSLWSTNYKEM--TVIDPMEDL------GGNVSTAAKKRRKLTLKDGSIRRRAPLAL 266
D+TV +W N EM T+I E + G + T +K R S +
Sbjct: 326 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 385
Query: 267 FESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLP-KL 325
H A V V F DD S S D TIK W+ T+ C +T + +A L +
Sbjct: 386 LVGHRAAVNVVDF---DDKYIVSASGDRTIKVWN--TSTCEFVRTLNGHKRGIACLQYRD 440
Query: 326 NLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVK 385
L+ GSS I L D + ++ L GH+ V + + I S ++DG +K
Sbjct: 441 RLVVSGSSDNTIRLWDIECGACLRV----LEGHEELVRCIRF---DNKRIVSGAYDGKIK 493
Query: 386 VWDV 389
VWD+
Sbjct: 494 VWDL 497
Score = 59.3 bits (142), Expect = 1e-08
Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 69/300 (23%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V L I +GS D VR ++++ G++ H + + + ++ +V+ DR+
Sbjct: 310 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRS 368
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
+ +W D D +L GH+A V +D I+SAS D T+ +W+T+
Sbjct: 369 IAVW----------DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTS 418
Query: 225 YKEMTVIDPMEDLGGNVSTAA--KKRRKLTLKDGS--------IRRRAPLALFESHSAPV 274
E + L G+ A + R +L + S I A L + E H V
Sbjct: 419 TCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 473
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSA 334
+ FD G + D IK WDL+ A
Sbjct: 474 RCIRFDNKRIVSG---AYDGKIKVWDLVAAL----------------------------- 501
Query: 335 RHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTA 394
DPR + + + + LV H V L +E+ I S+SHD T+ +WD ++ A
Sbjct: 502 ------DPRAPAGT-LCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFLNDPA 551
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 63.5 bits (153), Expect = 6e-10
Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
++VS D T+++W + K I L GH V+ + + I++ S
Sbjct: 315 KIVSGLRDNTIKIWDKNTLECKRI-------------LTGHTGSVLCLQYDERVIITGSS 361
Query: 215 DNTVSLWSTNYKEM--TVIDPMEDL------GGNVSTAAKKRRKLTLKDGSIRRRAPLAL 266
D+TV +W N EM T+I E + G + T +K R S +
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 421
Query: 267 FESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLP-KL 325
H A V V F DD S S D TIK W+ T+ C +T + +A L +
Sbjct: 422 LVGHRAAVNVVDF---DDKYIVSASGDRTIKVWN--TSTCEFVRTLNGHKRGIACLQYRD 476
Query: 326 NLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVK 385
L+ GSS I L D + ++ L GH+ V + + I S ++DG +K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRV----LEGHEELVRCIRF---DNKRIVSGAYDGKIK 529
Query: 386 VWDV 389
VWD+
Sbjct: 530 VWDL 533
Score = 59.3 bits (142), Expect = 1e-08
Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 69/300 (23%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V L I +GS D VR ++++ G++ H + + + ++ +V+ DR+
Sbjct: 346 VLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRS 404
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
+ +W D D +L GH+A V +D I+SAS D T+ +W+T+
Sbjct: 405 IAVW----------DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTS 454
Query: 225 YKEMTVIDPMEDLGGNVSTAA--KKRRKLTLKDGS--------IRRRAPLALFESHSAPV 274
E + L G+ A + R +L + S I A L + E H V
Sbjct: 455 TCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSA 334
+ FD G + D IK WDL+ A
Sbjct: 510 RCIRFDNKRIVSG---AYDGKIKVWDLVAAL----------------------------- 537
Query: 335 RHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTA 394
DPR + + + + LV H V L +E+ I S+SHD T+ +WD ++ A
Sbjct: 538 ------DPRAPAGT-LCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFLNDPA 587
>At2g32700 [R] KOG0266 WD40 repeat-containing protein
Length = 787
Score = 63.5 bits (153), Expect = 6e-10
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 34/292 (11%)
Query: 108 SLDVGSNYIYSGSYDGIVRTYNLSG-KVEKQYSGHSGPIRAVHYI-SSTRLVSAGNDRTL 165
S + S +D V +N+ +VE H+ I V + +ST+L ++ D+T+
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 166 RLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVS-KDRILSASCD--NTVSLWS 222
++W + G L + GH APV+SID K L SCD N + W
Sbjct: 577 KIWDAS------------DPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD 624
Query: 223 TNYKEMTVIDP------MEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEA 276
N + + + G AA + + +R + +F+ HS+ V +
Sbjct: 625 INASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKR--VNIFKGHSSNVHS 682
Query: 277 VIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLL-SVAQLPKLNLLACGSSAR 335
V + + + V SVS+D +K W L + C+ + S + SV P L +
Sbjct: 683 VCWSPNGELVA-SVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQ 740
Query: 336 HITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVW 387
I L + N + GH+ + AL P ++ SASHD +VK+W
Sbjct: 741 AIELWNTMENKCMTVA-----GHECVISALAQSPSTG-VVASASHDKSVKIW 786
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 63.5 bits (153), Expect = 6e-10
Identities = 68/317 (21%), Positives = 115/317 (35%), Gaps = 57/317 (17%)
Query: 123 GIVRTYNLSGKVEKQYSGHSGPI-RAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEE 181
G+ RT NL + Q GH G I A + L+S+G DR + +W+
Sbjct: 37 GVRRTSNLQAPI-MQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQV----------- 84
Query: 182 EIEDGKTLAILEGHKAPVVSIDVSKD--RILSASCDNTVSLWSTNYKEMTVIDPMEDLGG 239
ED + + + GH V+ + D I + S D T++ W
Sbjct: 85 -YEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFW------------------ 125
Query: 240 NVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTW 299
+++T ++RR F+ H V +V + + S S D TIK W
Sbjct: 126 DIATGQRQRR-----------------FKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIW 168
Query: 300 DLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHK 359
D T + + + +V + G + + D R + L GH
Sbjct: 169 DARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIR----KQAVLHHLRGHS 224
Query: 360 NFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWA 419
+ + + PE ++++ +A D T++VWDVR + W+
Sbjct: 225 DTITGMSLSPEGDFILTNAM-DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWS 283
Query: 420 KGVG-IISGGQDKKIQI 435
G I SG D+ + I
Sbjct: 284 PGSDKITSGSADRHVYI 300
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 62.8 bits (151), Expect = 1e-09
Identities = 73/293 (24%), Positives = 118/293 (39%), Gaps = 54/293 (18%)
Query: 139 SGHSGPI-RAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKA 197
SGH P+ R + + + +VSA D T+++W + E G L+GH
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVW-------------DYETGDFERTLKGHTD 151
Query: 198 PV--VSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAA---------K 246
V +S D S + S S D T+ LW +++ I M NVS+ A
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVS 209
Query: 247 KRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKC 306
R T+K ++ + F H V ++ D T+ S S D T++ W + T +C
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKEC 268
Query: 307 VD--------------TKTTSYSLLSVAQLPKLN-------LLACGSSARHITLHDPRVN 345
+SYS +S A + L GS + I + D
Sbjct: 269 KAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---- 324
Query: 346 SSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTI 398
S+ + LVGH N+V + ++ I S + D T++VWD ++ M T+
Sbjct: 325 VSTGMCLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKNKRCMKTL 376
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 62.8 bits (151), Expect = 1e-09
Identities = 64/255 (25%), Positives = 99/255 (38%), Gaps = 55/255 (21%)
Query: 139 SGHSGPIRAVHYI-SSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKA 197
SGH G + + + + L SAG DR + LW D A L+GH
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC------------DNYATLKGHSG 110
Query: 198 PVVSIDVSKD--RILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKD 255
V+ + + D + SAS D TV++W + E KR K
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERV-----------------KRLK----- 148
Query: 256 GSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYS 315
H++ V + + + + S D T+K WD+ + T +Y
Sbjct: 149 -------------GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ 195
Query: 316 LLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMI 375
+L+V + + G I + D R N K+T + GH + V L E Y++
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQN---KLTYT-MRGHADSVTGLSLSSEGSYLL 251
Query: 376 CSASHDGTVKVWDVR 390
+A D TV+VWDVR
Sbjct: 252 SNAM-DNTVRVWDVR 265
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 62.8 bits (151), Expect = 1e-09
Identities = 70/298 (23%), Positives = 117/298 (38%), Gaps = 70/298 (23%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSA 212
+L SAG D +R+W T+ D + K + +E H V I + + ++SA
Sbjct: 42 KLYSAGRDAIIRVWNTRTDSSE----------KYIQSMEHHNDWVNDIVLCCNGRNLISA 91
Query: 213 SCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSA 272
SCD TV +W+ ++ ++ +H
Sbjct: 92 SCDTTVKVWNA-----------------------------------QKGFCMSTLRTHRD 116
Query: 273 PVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV----DTKTTSY------SLLSVAQL 322
V+A+ + K + V S D I WD+ T + +T TTS S+ S+A
Sbjct: 117 YVQALAYAKDREQVA-SAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMN 175
Query: 323 PKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDG 382
P ++ GS+ + + DPR + + + +L GH V L P+ ++ S S DG
Sbjct: 176 PSGTVIVSGSTENILRIWDPR----TCMRRMKLRGHTENVRCLVVSPDGNQVV-SGSSDG 230
Query: 383 TVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAKGVGIISGGQDKKIQINKGDN 440
T+KVW++ + TI F IISG +D+ I + + N
Sbjct: 231 TIKVWNLGQQRCVQTIHVHKEGVWSLLMSENFQY-------IISGSRDRNIIVTEMRN 281
>YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 779
Score = 62.4 bits (150), Expect = 1e-09
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYN-LSGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
++ L NY+ +G+ D ++R Y+ ++ K Q SGH G + A+ Y LVS DRT
Sbjct: 385 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRT 444
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR----ILSASCDNTVSL 220
+R+W +I+ G + +GH + V +D+ + + I++ S DNT+ +
Sbjct: 445 VRVW-------------DIKKGCCTHVFKGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 491
Query: 221 WSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFD 280
W KE +V D E+ + + + + H A V V
Sbjct: 492 WKLP-KESSVPDHGEEHDYPLVFHTPEENPYF-----------VGVLRGHMASVRTV--- 536
Query: 281 KSDDTVGYSVSQDHTIKTWDLITAKCV 307
+ S S D+T+ WD+ KC+
Sbjct: 537 SGHGNIVVSGSYDNTLIVWDVAQMKCL 563
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 62.4 bits (150), Expect = 1e-09
Identities = 74/294 (25%), Positives = 114/294 (38%), Gaps = 69/294 (23%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V L I +GS D VR ++++ G+V H+ + + + S+ +V+ DR+
Sbjct: 249 VLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRS 307
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
+ +W D D +L GH+A V +D I+SAS D T+ +WST+
Sbjct: 308 IAVW----------DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTS 357
Query: 225 YKEMTVIDPMEDLGGNVSTAA--KKRRKLTLKDGS--------IRRRAPLALFESHSAPV 274
E + L G+ A + R +L + S I A L + E H V
Sbjct: 358 TCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 412
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSA 334
+ FD G + D IK WDL A
Sbjct: 413 RCIRFDNKRIVSG---AYDGKIKVWDLQAAL----------------------------- 440
Query: 335 RHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
DPR +S+ + + LV H V L +E+ I S+SHD T+ +WD
Sbjct: 441 ------DPRAPAST-LCLRTLVEHSGRVFRLQF---DEFQIISSSHDDTILIWD 484
Score = 61.6 bits (148), Expect = 2e-09
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 34/246 (13%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
+++S D ++++W D+ +E L +L GH V+ + + I++ S
Sbjct: 218 KIISGLRDNSIKIW----------DKTSLE---CLKVLTGHTGSVLCLQYDERVIVTGSS 264
Query: 215 DNTVSLWSTNYKEM--TVIDPMEDL------GGNVSTAAKKRRKLTLKDGSIRRRAPLAL 266
D+TV +W N E+ T+I E + G + T +K R S +
Sbjct: 265 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 324
Query: 267 FESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLP-KL 325
H A V V F DD S S D TIK W T+ C +T + +A L +
Sbjct: 325 LVGHRAAVNVVDF---DDKYIVSASGDRTIKVWS--TSTCEFVRTLNGHKRGIACLQYRD 379
Query: 326 NLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVK 385
L+ GSS I L D + ++ L GH+ V + + I S ++DG +K
Sbjct: 380 RLVVSGSSDNTIRLWDIECGACLRV----LEGHEELVRCIRF---DNKRIVSGAYDGKIK 432
Query: 386 VWDVRS 391
VWD+++
Sbjct: 433 VWDLQA 438
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 62.4 bits (150), Expect = 1e-09
Identities = 74/294 (25%), Positives = 114/294 (38%), Gaps = 69/294 (23%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V L I +GS D VR ++++ G+V H+ + + + S+ +V+ DR+
Sbjct: 270 VLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRS 328
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
+ +W D D +L GH+A V +D I+SAS D T+ +WST+
Sbjct: 329 IAVW----------DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTS 378
Query: 225 YKEMTVIDPMEDLGGNVSTAA--KKRRKLTLKDGS--------IRRRAPLALFESHSAPV 274
E + L G+ A + R +L + S I A L + E H V
Sbjct: 379 TCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 433
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSA 334
+ FD G + D IK WDL A
Sbjct: 434 RCIRFDNKRIVSG---AYDGKIKVWDLQAAL----------------------------- 461
Query: 335 RHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
DPR +S+ + + LV H V L +E+ I S+SHD T+ +WD
Sbjct: 462 ------DPRAPAST-LCLRTLVEHSGRVFRLQF---DEFQIISSSHDDTILIWD 505
Score = 61.6 bits (148), Expect = 2e-09
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 34/246 (13%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
+++S D ++++W D+ +E L +L GH V+ + + I++ S
Sbjct: 239 KIISGLRDNSIKIW----------DKTSLE---CLKVLTGHTGSVLCLQYDERVIVTGSS 285
Query: 215 DNTVSLWSTNYKEM--TVIDPMEDL------GGNVSTAAKKRRKLTLKDGSIRRRAPLAL 266
D+TV +W N E+ T+I E + G + T +K R S +
Sbjct: 286 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 345
Query: 267 FESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLP-KL 325
H A V V F DD S S D TIK W T+ C +T + +A L +
Sbjct: 346 LVGHRAAVNVVDF---DDKYIVSASGDRTIKVWS--TSTCEFVRTLNGHKRGIACLQYRD 400
Query: 326 NLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVK 385
L+ GSS I L D + ++ L GH+ V + + I S ++DG +K
Sbjct: 401 RLVVSGSSDNTIRLWDIECGACLRV----LEGHEELVRCIRF---DNKRIVSGAYDGKIK 453
Query: 386 VWDVRS 391
VWD+++
Sbjct: 454 VWDLQA 459
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 62.4 bits (150), Expect = 1e-09
Identities = 74/294 (25%), Positives = 114/294 (38%), Gaps = 69/294 (23%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRT 164
V L I +GS D VR ++++ G+V H+ + + + S+ +V+ DR+
Sbjct: 283 VLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRS 341
Query: 165 LRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTN 224
+ +W D D +L GH+A V +D I+SAS D T+ +WST+
Sbjct: 342 IAVW----------DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTS 391
Query: 225 YKEMTVIDPMEDLGGNVSTAA--KKRRKLTLKDGS--------IRRRAPLALFESHSAPV 274
E + L G+ A + R +L + S I A L + E H V
Sbjct: 392 TCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 446
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSA 334
+ FD G + D IK WDL A
Sbjct: 447 RCIRFDNKRIVSG---AYDGKIKVWDLQAAL----------------------------- 474
Query: 335 RHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
DPR +S+ + + LV H V L +E+ I S+SHD T+ +WD
Sbjct: 475 ------DPRAPAST-LCLRTLVEHSGRVFRLQF---DEFQIISSSHDDTILIWD 518
Score = 61.6 bits (148), Expect = 2e-09
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 34/246 (13%)
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
+++S D ++++W D+ +E L +L GH V+ + + I++ S
Sbjct: 252 KIISGLRDNSIKIW----------DKTSLE---CLKVLTGHTGSVLCLQYDERVIVTGSS 298
Query: 215 DNTVSLWSTNYKEM--TVIDPMEDL------GGNVSTAAKKRRKLTLKDGSIRRRAPLAL 266
D+TV +W N E+ T+I E + G + T +K R S +
Sbjct: 299 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 267 FESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLP-KL 325
H A V V F DD S S D TIK W T+ C +T + +A L +
Sbjct: 359 LVGHRAAVNVVDF---DDKYIVSASGDRTIKVWS--TSTCEFVRTLNGHKRGIACLQYRD 413
Query: 326 NLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVK 385
L+ GSS I L D + ++ L GH+ V + + I S ++DG +K
Sbjct: 414 RLVVSGSSDNTIRLWDIECGACLRV----LEGHEELVRCIRF---DNKRIVSGAYDGKIK 466
Query: 386 VWDVRS 391
VWD+++
Sbjct: 467 VWDLQA 472
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 61.6 bits (148), Expect = 2e-09
Identities = 53/208 (25%), Positives = 84/208 (39%), Gaps = 51/208 (24%)
Query: 187 KTLAILEGHKAPVVSIDVSK--DRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTA 244
++ +L GH PV S S D +LS+S D T+ LWST
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWST--------------------- 447
Query: 245 AKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGY---SVSQDHTIKTWDL 301
+ A L ++ H+ PV +D G+ S S D T + W +
Sbjct: 448 --------------KLNANLVCYKGHNYPV----WDAQFSPFGHYFASCSHDRTARIWSM 489
Query: 302 ITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNF 361
+ + + L V P N +A GSS + + L D + +I +GH++
Sbjct: 490 --DRIQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRI----FIGHRSM 543
Query: 362 VVALDTCPENEYMICSASHDGTVKVWDV 389
V++L P+ YM S DGT+ +WD+
Sbjct: 544 VLSLAMSPDGRYM-ASGDEDGTIMMWDL 570
Score = 55.5 bits (132), Expect = 2e-07
Identities = 70/271 (25%), Positives = 104/271 (37%), Gaps = 47/271 (17%)
Query: 140 GHSGPIRAVHYISSTRLV-SAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAP 198
GHSGP+ + + V S+ D T+RLW TK + L +GH P
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLN-------------ANLVCYKGHNYP 462
Query: 199 VVSIDVSKDRILSASC--DNTVSLWSTNYKEMTVIDPMEDLGGNVSTA---------AKK 247
V S ASC D T +WS M I P+ + G++S A
Sbjct: 463 VWDAQFSPFGHYFASCSHDRTARIWS-----MDRIQPLRIMAGHLSDVDWHPNCNYIATG 517
Query: 248 RRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV 307
T++ ++ + +F H + V ++ D S +D TI WDL TA+C
Sbjct: 518 SSDKTVRLWDVQTGECVRIFIGHRSMVLSLAM-SPDGRYMASGDEDGTIMMWDLSTARC- 575
Query: 308 DTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDT 367
+ L N S R + +D + +G +VV T
Sbjct: 576 -----------ITPLMGHNSCVWSLSYRVVQGYDIEWYGFLSWVVECCIGLMCWVVNGMT 624
Query: 368 ---CPENEYMICSASHDGTVKVWDVRSNTAM 395
C E ++ S S D TVK+WDV S+T +
Sbjct: 625 GFGCGEGS-LLASGSADCTVKLWDVTSSTKL 654
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 61.6 bits (148), Expect = 2e-09
Identities = 69/243 (28%), Positives = 112/243 (45%), Gaps = 28/243 (11%)
Query: 87 YTRAVLPPSYLSSFDNEDWVSSLDV-----GSNYIYSGSYDGIVRTYNLSGK-VEKQYSG 140
Y A + SY+ + +++ V SLD G+ I +GS D VR +N + K +G
Sbjct: 386 YDVATMSCSYVLA-GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTG 444
Query: 141 HSGPIRAVHYI--SSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAP 198
H+G I AV + S + VS DRTL++W D S D EE + KT +++ H
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL---DGISEDSEEPINLKTRSVVAAHDKD 501
Query: 199 VVSIDVSKDRIL--SASCDNTVSLWST----------NYKEMTVIDPMEDLGGNVSTAAK 246
+ S+ V+++ L + S D T S+W +K + V TA+
Sbjct: 502 INSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASG 561
Query: 247 KRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKC 306
+ T+K +I + L FE H++ V F +D T S D +K W++ T++C
Sbjct: 562 DK---TVKIWAISDGSCLKTFEGHTSSVLRASFI-TDGTQFVSCGADGLLKLWNVNTSEC 617
Query: 307 VDT 309
+ T
Sbjct: 618 IAT 620
Score = 54.3 bits (129), Expect = 4e-07
Identities = 75/381 (19%), Positives = 145/381 (37%), Gaps = 70/381 (18%)
Query: 108 SLDVGSNYIYSGSYDGIVRTYNLSG-KVEKQYSGHSGPIRAVH-YISSTRLVSAGNDRTL 165
+L ++S + +R ++L K + + GH GP+ + + S L +AG DR +
Sbjct: 67 ALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKV 126
Query: 166 RLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSI----DVSKDRILSASCDNTVSLW 221
+W +++ G GHK V SI D +K+ ++S S D TV +W
Sbjct: 127 LVW-------------DVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVW 173
Query: 222 STNYK--EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRR------------RAPLALF 267
N K E + ME V++ A LTL + +A +A +
Sbjct: 174 DLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATY 233
Query: 268 E--------SHSAPVEAVIFD---------KSDDTVGY--SVSQDHTIKTWDLITAKCV- 307
E S P + + +SD Y +V + ++ W + C+
Sbjct: 234 EVLEAVTTVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLY 293
Query: 308 -----------DTKTTSYSLLSVAQLPKLNLLACGSSARHITLHD--PRVNSSSKITQQQ 354
D + + + A LP + L C ++ + + V + + ++
Sbjct: 294 EQKSSDITVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEETELVLSKR 353
Query: 355 LVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXF 414
LVG+ + + + E + A++ V+V+DV + + Y +
Sbjct: 354 LVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDT---- 409
Query: 415 AVKWAKGVGIISGGQDKKIQI 435
V + V I++G +DK +++
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRL 430
>At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1218
Score = 61.6 bits (148), Expect = 2e-09
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 36/295 (12%)
Query: 115 YIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRL-VSAGNDRTLRLWKTKN 172
+I + + G+++ ++ G + ++ H GP+R VH+ +S L VS G+D +++W K
Sbjct: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKT 82
Query: 173 DDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVSLWSTNYKEMTV 230
+ L L GH + ++ + I+SAS D T+ +W N++ T
Sbjct: 83 H-------------RCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW--NWQSRTC 127
Query: 231 IDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPL----ALFESHSAPVEAVIFDKSDDTV 286
I + V A+ ++ + S+ + + AL + ++P +DD +
Sbjct: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASP--------ADDLM 179
Query: 287 GYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNS 346
+S D I ++ + S P L L+ G+ R + L R+N
Sbjct: 180 RFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFH--PTLPLIVSGADDRQVKLW--RMNE 235
Query: 347 SSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITRE 401
+ L GH N V ++ + + +I S S D +++VWD T + T RE
Sbjct: 236 TKAWEVDTLRGHMNNVSSVMFHAKQD-IIVSNSEDKSIRVWDATKRTGIQTFRRE 289
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 59.7 bits (143), Expect = 9e-09
Identities = 71/293 (24%), Positives = 115/293 (39%), Gaps = 53/293 (18%)
Query: 139 SGHSGPI-RAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKA 197
+GH I R + + +VSA D T+R+W + E G+ L+GH
Sbjct: 105 TGHRASITRVIFHPIFALMVSASEDATIRIW-------------DFETGEYERSLKGHTD 151
Query: 198 PV--VSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAA---------K 246
V V+ D + S S D ++ LW + I M NVS+ A
Sbjct: 152 SVQDVAFDAQGKLLASCSADLSIKLWDFQ-QSYECIKTMHGHDHNVSSVAFVPAGDYVLS 210
Query: 247 KRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKC 306
R T+K + + + H V V + ++ + S D TI+ W + C
Sbjct: 211 ASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVH-IEGSIFATCSNDQTIRVWLTNSKDC 269
Query: 307 -VDTKTTSYSLLSVAQLPKLN--------------------LLACGSSARHITLHDPRVN 345
V+ + +++ +A P+ LA GS + I + D V
Sbjct: 270 KVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVG 329
Query: 346 SSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTI 398
+ L GH N+V L P +Y++ SAS D T++VWD+R+ M T+
Sbjct: 330 ----LCLLTLSGHDNWVRGLAFHPGGKYLV-SASDDKTIRVWDLRNKRCMKTL 377
>SPBC32H8.07 [R] KOG0286 G-protein beta subunit
Length = 305
Score = 59.3 bits (142), Expect = 1e-08
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 140 GHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPV 199
GH+G + Y+ L++ D+T W +IE K +++L+GH+ +
Sbjct: 104 GHAGFVSCCKYVDDGHLLTGSGDKTCMFW-------------DIEQAKAISVLKGHEMDI 150
Query: 200 VSIDV---SKDRILSASCDNTVSLWSTN--YKEMTVIDPMEDLGGNVSTAAKKRRKLTLK 254
VS+D + + ++ CD LW Y T D+ ++S +T
Sbjct: 151 VSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTSDI-NSISFFPSNADFVTGA 209
Query: 255 DGSIRR----RAPLALFE---SHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV 307
+ I R RA +F+ S+P+ +V+F KS + +++D T + WD I++K +
Sbjct: 210 EDGIARCFDIRASAEIFQYSSPSSSPINSVLFSKSGKLL--FIAKDKTCEVWDSISSKTI 267
Query: 308 DTKTTSYS-LLSVAQLPKLNLLACGS 332
+ T + + S+A +LA GS
Sbjct: 268 TSLTGHENRISSLALTSDGTMLATGS 293
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 58.9 bits (141), Expect = 1e-08
Identities = 70/326 (21%), Positives = 127/326 (38%), Gaps = 59/326 (18%)
Query: 92 LPPS---YLSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAV 148
+PP+ L ++E ++ + + S+ + SGS D R +NLS E SG + +
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLS---ENSTSGSTQLVLRH 213
Query: 149 HYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEI-----EDGKTLAILEGHKAPVVSID 203
+ V + D T W ++ L + + +DG + L HK P+ ++
Sbjct: 214 CIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALK 273
Query: 204 VSK--DRILSASCDNTVSLWSTNYKEMTVIDPMEDLGG------NVSTAAKKRRKLTLKD 255
+K + ILSA D T +W + E P + +T A + +
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHV 333
Query: 256 GSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV-DTKTTSY 314
+ + P+ F+ H+ V A+ +D + + + S S D T+K W + CV D + +
Sbjct: 334 CKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA-SCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 315 SLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYM 374
+ ++ P P N+ P M
Sbjct: 393 EIYTIKWSPT----------------GPGTNN----------------------PNANLM 414
Query: 375 ICSASHDGTVKVWDVRSNTAMYTITR 400
+ SAS D TV++WDV ++T+T+
Sbjct: 415 LASASFDSTVRLWDVDRGICIHTLTK 440
>YMR116c [T] KOG0279 G protein beta subunit-like protein
Length = 319
Score = 58.5 bits (140), Expect = 2e-08
Identities = 67/270 (24%), Positives = 111/270 (40%), Gaps = 55/270 (20%)
Query: 140 GHSGPIRAVHYISS--TRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKA 197
GH+G + ++ + L+SA D+TL WK DD K G + +GH
Sbjct: 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF--------GVPVRSFKGHSH 66
Query: 198 PVVSIDVSKDRI--LSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKD 255
V ++ D LSAS D T+ LW +V+T +R
Sbjct: 67 IVQDCTLTADGAYALSASWDKTLRLW------------------DVATGETYQR------ 102
Query: 256 GSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYS 315
F H + V +V DK + S S+D TIK W I +C+ T
Sbjct: 103 -----------FVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWT-IKGQCLATLLGHND 149
Query: 316 LLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQL----VGHKNFVVALDTCPEN 371
+S ++ N A S I+ + ++ + + Q Q+ +GH + + L P+
Sbjct: 150 WVSQVRVVP-NEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208
Query: 372 EYMICSASHDGTVKVWDVRSNTAMYTITRE 401
+I SA DG + +W++ + AMYT++ +
Sbjct: 209 T-LIASAGKDGEIMLWNLAAKKAMYTLSAQ 237
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 58.5 bits (140), Expect = 2e-08
Identities = 70/295 (23%), Positives = 125/295 (41%), Gaps = 56/295 (18%)
Query: 136 KQYSGHSGPI-RAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEG 194
++ +GH PI R + + T + S D T+++W + E G+ L+G
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVW-------------DYETGQLERTLKG 146
Query: 195 HKAPV--VSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAK------ 246
H V ++ID + +++S S D ++ LW D ++ L G+ T +
Sbjct: 147 HTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ----TYDCLKSLKGHEHTVSSVTFLPT 202
Query: 247 ------KRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWD 300
R T+K I + F H+ V + +D T+ S S D T+ W
Sbjct: 203 GDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS-NDGTLFASASLDQTVTVWS 261
Query: 301 LIT-------------AKCVD-TKTTSYSLLSVAQLPKLN---LLACGSSARHITLHDPR 343
T +CV+ T+Y+ ++ Q P+ N +L GS R I +
Sbjct: 262 FATKSAKLVLRDHEHAVECVEWAPDTAYTNVT-GQQPEGNSTHILFSGSRDRSIKAWN-- 318
Query: 344 VNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTI 398
+N+ + L+ H+N+V L P+ +Y+I S + D T++VW++ + M I
Sbjct: 319 INTGDVLFT--LLAHENWVRGLAFHPKGKYLI-SVADDKTLRVWELSAQRCMKAI 370
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 58.2 bits (139), Expect = 2e-08
Identities = 65/271 (23%), Positives = 109/271 (39%), Gaps = 71/271 (26%)
Query: 145 IRAVHYISSTRLVSAG-NDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSID 203
IR+V + + ++ G DR +R+W +IE+ K + IL+GH+ + S+D
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIW-------------DIENRKIVMILQGHEQDIYSLD 492
Query: 204 V--SKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRR 261
S D+++S S D TV +W + ++ +ED G + A + GS+ R
Sbjct: 493 YFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED--GVTTVAVSPGDGKYIAAGSLDRA 550
Query: 262 APLALFES----------------HSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITA- 304
+ E+ H V +V+F + +V S S D ++K W+L A
Sbjct: 551 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV-VSGSLDRSVKLWNLQNAN 609
Query: 305 KCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVA 364
D+KT + V +GHK+FV++
Sbjct: 610 NKSDSKTPNSGTCEVT----------------------------------YIGHKDFVLS 635
Query: 365 LDTCPENEYMICSASHDGTVKVWDVRSNTAM 395
+ T +EY I S S D V WD +S +
Sbjct: 636 VATTQNDEY-ILSGSKDRGVLFWDKKSGNPL 665
>ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 423
Score = 58.2 bits (139), Expect = 2e-08
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 66/300 (22%)
Query: 102 NEDWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTRLVSAGN 161
N+ ++ + + + + S D ++ + + G++ + + GH G + + + LVS
Sbjct: 114 NQSDITFMQIDKDKVACSSDDQTIKIFGMDGRLIRTFVGHKGGVWTFMF-NDKYLVSGST 172
Query: 162 DRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLW 221
D+T R+W ++ G TL +L GHK+ V S+ + D I + S D + +W
Sbjct: 173 DKTARIW-------------DLWTGCTLCVLIGHKSVVRSLKIYDDYIATGSRDAEIRIW 219
Query: 222 STNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDK 281
+ R L + + H+ V + +
Sbjct: 220 NF------------------------------------RGTCLNVLKGHTMSVRCMDMGE 243
Query: 282 SDDTVGYSVSQDHTIKTWDLITAKCVD-TKTTSYSLLSVAQLPKLNLLACGS--SARHIT 338
S G S D ++ WD K + K S + SV+ + +A GS S+ H++
Sbjct: 244 SYLVSG---SYDGSVALWDYRRGKLLRYLKPHSLRVYSVSL--SSSYVASGSLDSSVHVS 298
Query: 339 LHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTI 398
D ++ S +I H++ V+ L +++ S + DG + WDV N +Y I
Sbjct: 299 TLDGKLQCSYRI-------HRSLVIWLKFVGSGRFLLSSGA-DGILCKWDVLENALVYKI 350
>CE02186 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 58.2 bits (139), Expect = 2e-08
Identities = 62/289 (21%), Positives = 108/289 (36%), Gaps = 72/289 (24%)
Query: 114 NYIYSGSYDGIVRTYNLSGK-----VEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLW 168
+++ G D I Y+L + V ++ GH+G + ++ ++V++ D T LW
Sbjct: 110 SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALW 169
Query: 169 KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSASCDNTVSLWSTNYK 226
+IE G+ GH V+S+ +S D +S +CD + LW
Sbjct: 170 -------------DIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWD---- 212
Query: 227 EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTV 286
++DG ++ F H + + AV F S +
Sbjct: 213 --------------------------IRDGMCKQ-----TFPGHESDINAVAFFPSGNAF 241
Query: 287 GYSVSQDHTIKTWDLITAKCVDTKTTSYS-------LLSVAQLPKLNLLACGSSARHITL 339
+ S D T + +D+ D + YS + SVA LL G + +
Sbjct: 242 A-TGSDDATCRLFDI----RADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNV 296
Query: 340 HDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
D + + L GH N V L E+ +C+ S D +K+W+
Sbjct: 297 WDSMRQERAGV----LAGHDNRVSCLGV-TEDGMAVCTGSWDSFLKIWN 340
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 57.8 bits (138), Expect = 3e-08
Identities = 60/225 (26%), Positives = 102/225 (44%), Gaps = 40/225 (17%)
Query: 103 EDWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVE-KQYSGHSGPIRAVHY-ISSTRLVSAG 160
ED V S D + SGS+DG +R ++L+ V +++ GH+ + +V + + + ++VSA
Sbjct: 67 EDVVLSSD--GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS 124
Query: 161 NDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVS----KDRILSASCDN 216
DRT++LW T + +I E EGH+ V + S + I+SAS D
Sbjct: 125 RDRTIKLWNTLGECKYTISEGG----------EGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Query: 217 TVSLWS-------------TNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAP 263
TV +W+ T Y + P G++ + K + L D +
Sbjct: 175 TVKVWNLSNCKLRSTLAGHTGYVSTVAVSP----DGSLCASGGKDGVVLLWD--LAEGKK 228
Query: 264 LALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVD 308
L E++S + A+ F S + + +H IK WDL + V+
Sbjct: 229 LYSLEANSV-IHALCF--SPNRYWLCAATEHGIKIWDLESKSIVE 270
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 57.4 bits (137), Expect = 4e-08
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 289 SVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSS 348
S DHTI+ W+ +T C T S S ++ ++ L + +++ L+D R + +
Sbjct: 7 SAGYDHTIRFWEALTGVCSRTIQHSDSQVNRLEITNDKKLLATAGHQNVRLYDIRTTNPN 66
Query: 349 KITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRS 391
+ + GH+ V ++ +N +M+ S S DGT+KVWDVRS
Sbjct: 67 PVASFE--GHRGNVTSVSFQQDNRWMVTS-SEDGTIKVWDVRS 106
>Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 350
Score = 57.4 bits (137), Expect = 4e-08
Identities = 54/204 (26%), Positives = 90/204 (43%), Gaps = 28/204 (13%)
Query: 113 SNYIYSGSYDGIVRTYNLSGKVE---KQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLW- 168
SNY+ +G D ++R Y+L+ K E K+ SGH+ I+ + S + + + +D+T+RLW
Sbjct: 112 SNYLLTGGQDKLLRIYDLN-KPEAEPKEISGHTSGIKKALWCSEDKQILSADDKTVRLWD 170
Query: 169 -------KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLW 221
K+ N ++ E I +G+ L I G S VS D I S T++
Sbjct: 171 HATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSA-VSLDPIKSFEAPATINSA 229
Query: 222 STNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDK 281
S + ++ ++ ED K K G L ++ H P+ V F
Sbjct: 230 SLHPEKEFLVAGGEDF---------KLYKYDYNSGE-----ELESYKGHFGPIHCVRF-S 274
Query: 282 SDDTVGYSVSQDHTIKTWDLITAK 305
D + S S+D T++ W + K
Sbjct: 275 PDGELYASGSEDGTLRLWQTVVGK 298
>At5g14530 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA
cleavage factor II complex subunit SWD2
Length = 330
Score = 57.4 bits (137), Expect = 4e-08
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 253 LKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV----- 307
L DG +RR A A+F + +V F ++DD + S S+D +++ +D+ AK +
Sbjct: 6 LDDGLVRRMAMGAVFSDFGGKIHSVGFHRTDDLLVTS-SEDDSLRLFDIANAKQLKITYH 64
Query: 308 -----DTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFV 362
D ++ S+ + NL + G S R+++++D R+ K GHK+ V
Sbjct: 65 KKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFK-------GHKDRV 117
Query: 363 VALDTCPENEYMICSASHDGTVKVWDVRSN 392
V+L P N+ + S S D +V++WD+R N
Sbjct: 118 VSLCMSPINDSFM-SGSLDRSVRLWDLRVN 146
>Hs4557467 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 396
Score = 57.0 bits (136), Expect = 6e-08
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 270 HSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT---KTTSYSLLSVAQLPKLN 326
H VE V + D + S S D T+K WD T + D + T YS K
Sbjct: 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHC 157
Query: 327 LLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKV 386
L+A G+ + L D + S S I Q GH+ ++A+ P +Y++ +AS D VK+
Sbjct: 158 LVAVGTRGPKVQLCDLKSGSCSHILQ----GHRQEILAVSWSPRYDYILATASADSRVKL 213
Query: 387 WDVR 390
WDVR
Sbjct: 214 WDVR 217
>ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 556
Score = 57.0 bits (136), Expect = 6e-08
Identities = 64/230 (27%), Positives = 106/230 (45%), Gaps = 26/230 (11%)
Query: 174 DLKSIDEEEIEDGKTLAILEGHKAPVVSIDV--SKDRILSASCDNTVSLWSTN------- 224
D+K+++EE+ E+ + L GH PV + S ++S+S D TV LWS +
Sbjct: 300 DIKTLNEEKFEEVGSSYKLVGHSGPVYGLKFFSSNKFLVSSSQDCTVCLWSLDLLCLLAV 359
Query: 225 YKEMTVIDPMEDLGGN---VSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDK 281
YK D+ N ++ A R+ + S+ P L S + V AV F
Sbjct: 360 YKAHAFPVWCVDVAPNDYFFASGAGDRQAIV---WSVMTSKPERLIISSLSDVTAVKFHP 416
Query: 282 SDDTVGYSVSQDHTIKTWDLITAKCVDT---KTTSYSLLSVAQLPKLNLLACGSSARHIT 338
+ + ++ S DH ++ D+ TA V T + + + V+ K LA GS R +
Sbjct: 417 NSSYL-FTGSSDHRVRMHDISTASVVRIFCGHTDTVTCMDVSHCGK--FLASGSKDRTVL 473
Query: 339 LHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
L D + SSK+ + VGH+N V ++ C ++ S D +V++WD
Sbjct: 474 LWDIQ---SSKLL-GKYVGHENTVFSVSFCFYGS-VLASCGADNSVRLWD 518
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 56.6 bits (135), Expect = 7e-08
Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 22/250 (8%)
Query: 153 STRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR--IL 210
ST + + +RLW K D +ED L H PV S D +L
Sbjct: 336 STMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLL 395
Query: 211 SASCDNTVSLWSTNYKEMTV-----IDPMEDL-----GGNVSTAAKKRRKLTLKDGSIRR 260
S S D + LWS + K V P+ D+ G +TA+ + T + S
Sbjct: 396 SCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQ---TAQLWSCDH 452
Query: 261 RAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT-KTTSYSLLSV 319
PL +F H + V+ V F + V + S D T + WD+ V + + +V
Sbjct: 453 IYPLRVFAGHLSDVDCVTFHPNSAYV-LTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Query: 320 AQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSAS 379
A P + +A S I L D + + +I + + GH+ + +L E+ ++ S
Sbjct: 512 AIAPDGHTMASADSEGLIHLWD--IGTGRRI--KTMRGHRGNIYSLSFSRESTVLV-SGG 566
Query: 380 HDGTVKVWDV 389
D TV+ WDV
Sbjct: 567 SDCTVRAWDV 576
>Hs4507283 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 780
Score = 56.6 bits (135), Expect = 7e-08
Identities = 60/267 (22%), Positives = 107/267 (39%), Gaps = 38/267 (14%)
Query: 138 YSGHSGPIRAVHYISS-TRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHK 196
+ H GP+ V S+ + S G D ++ W T N ++ D + L GH
Sbjct: 512 FRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDS--YDPSVLRGPLLGHT 569
Query: 197 APV--VSIDVSKDRILSASCDNTVSLWSTNY--KEMTVIDPMEDLGGNVSTAAKKRRKLT 252
V ++ + R+LS S D T+ LW+T ++V + +++LG
Sbjct: 570 DAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDIKELG-------------- 615
Query: 253 LKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTT 312
P ++ S P V T +++ I T + + T +
Sbjct: 616 ---------IPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILT---LESNVDTTANS 663
Query: 313 SYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENE 372
S + V P L++ RHI +D N++ K+ +V H V +L P
Sbjct: 664 SCQINRVISHPTLSISITAHEDRHIKFYD---NNTGKLIHS-MVAHLEAVTSLAVDPNGL 719
Query: 373 YMICSASHDGTVKVWDVRSNTAMYTIT 399
Y++ S SHD ++++W++ S T + T
Sbjct: 720 YLM-SGSHDCSIRLWNLESKTCIQEFT 745
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 56.6 bits (135), Expect = 7e-08
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 50/314 (15%)
Query: 102 NEDWVSSLD--VGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYIS-STRLVS 158
N+D V+SLD + + +GSYDG R + G++ H GPI A+ + ++S
Sbjct: 410 NKD-VTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNYILS 468
Query: 159 AGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTV 218
AG D+T +W + G+ H AP + +D ++ ASC
Sbjct: 469 AGVDKTTIIW-------------DASTGQCTQQFAFHSAPALDVDWQTNQAF-ASCSTDQ 514
Query: 219 SLWSTNYKEMTVIDPMEDLGGNVSTA------------AKKRRKLTLKDGSIRRRAPLAL 266
+ + + V +P++ G+ + A +TLK S+ R
Sbjct: 515 RI---HVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHD 571
Query: 267 FESHSAPVEAVIF--------DKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTT-SYSLL 317
++HS + + + + + + + S S D T++ WD+ C+ T T + +
Sbjct: 572 LQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVY 631
Query: 318 SVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENE-YMIC 376
SVA P LA GS D V+ S T Q + +K + C ++ +
Sbjct: 632 SVAFSPDGKHLASGS-------FDKCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVG 684
Query: 377 SASHDGTVKVWDVR 390
+++ DG+V V D+R
Sbjct: 685 ASASDGSVFVLDLR 698
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 56.2 bits (134), Expect = 9e-08
Identities = 72/324 (22%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 133 KVEKQYSGHSGPIR--AVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLA 190
K+ + +GH G +R A+ + + ++ ND T+++W ++ GK
Sbjct: 130 KLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVW-------------DLATGKLKT 176
Query: 191 ILEGHKAPVVSIDVSKDR---ILSASCDNTVSLWSTNYKEMTVIDPMEDLGG-------- 239
L GH V + VS DR + S S D TV W K + D L G
Sbjct: 177 TLAGHVMTVRDVAVS-DRHPYLFSVSEDKTVKCWDLE-KNQIIRDYYGHLSGVRTVSIHP 234
Query: 240 NVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTW 299
+ A R +K +R R P+ H P+ V D V S S D T++ W
Sbjct: 235 TLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQV-VSSSTDATVRLW 293
Query: 300 DLITAKCVDTKT-TSYSLLSVAQLPKLNLL--ACGSSARHITLHDPRVNSSSKITQQQLV 356
D++ K + T S+ + A PK + AC R L + + ++ + + ++
Sbjct: 294 DVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTGII 353
Query: 357 GHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTI-TREXXXXXXXXXXXXFA 415
+ + ++ + +G + +D +S ++ TRE +
Sbjct: 354 NTLSI--------NQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCS 405
Query: 416 VKWAKGVGIISGGQDKKIQINKGD 439
G+ +I+G DK I+I K D
Sbjct: 406 TFDKTGLRLITGEADKSIKIWKQD 429
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 56.2 bits (134), Expect = 9e-08
Identities = 68/319 (21%), Positives = 121/319 (37%), Gaps = 58/319 (18%)
Query: 97 LSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYI-SSTR 155
L ++E ++ + + S+ + SGS D R +NL+ + +G S + H I
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN----ENSNGGSTQLVLRHCIREGGH 283
Query: 156 LVSAGNDRTLRLWKTKNDDLKSIDEEEI-----EDGKTLAILEGHKAPVVSIDVSK--DR 208
V + D T W T L + + EDG + L HK P+ ++ ++ +
Sbjct: 284 DVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNY 343
Query: 209 ILSASCDNTVSLWSTNYKEMTVIDPMEDLGG------NVSTAAKKRRKLTLKDGSIRRRA 262
ILSA D T +W + E P N +T A + + +
Sbjct: 344 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDR 403
Query: 263 PLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV-DTKTTSYSLLSVAQ 321
P+ F+ H+ V A+ +D S + S S D T+K W + C+ D + + + ++
Sbjct: 404 PVKTFQGHTNEVNAIKWDPSGMLLA-SCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKW 462
Query: 322 LPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHD 381
P P ++ P + M+ SAS D
Sbjct: 463 SPT----------------GPATSN----------------------PNSNIMLASASFD 484
Query: 382 GTVKVWDVRSNTAMYTITR 400
TV++WD+ +T+T+
Sbjct: 485 STVRLWDIERGVCTHTLTK 503
Score = 56.2 bits (134), Expect = 9e-08
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 46/257 (17%)
Query: 102 NEDWVSSLDVGSN--YIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHY-ISSTRLVS 158
N+D V+SLD +N + +GSYDG R + G + H GPI A+ + ++S
Sbjct: 288 NKD-VTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS 346
Query: 159 AGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD----------- 207
AG D+T +W + G+ H AP + +D +
Sbjct: 347 AGVDKTTIIW-------------DAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMC 393
Query: 208 -RILSASCDNTVSLWSTNYKEMTVI--DPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPL 264
+ CD V + + E+ I DP L + S +TLK S+++ +
Sbjct: 394 IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSD------DMTLKIWSMKQEVCI 447
Query: 265 ALFESHS--------APVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYS- 315
++H+ +P + + + + S S D T++ WD+ C T T
Sbjct: 448 HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEP 507
Query: 316 LLSVAQLPKLNLLACGS 332
+ SVA P LA GS
Sbjct: 508 VYSVAFSPDGKYLASGS 524
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 56.2 bits (134), Expect = 9e-08
Identities = 71/316 (22%), Positives = 119/316 (37%), Gaps = 46/316 (14%)
Query: 93 PPSYLSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNLSGKVEK--QYSGHSGPIRAVHY 150
P L E + S +++ S YD + +N+ G+ E GH G I V +
Sbjct: 28 PTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKF 87
Query: 151 -ISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSK--- 206
S+ LVSAG D+T+R+W ++E G + + H V S+DV++
Sbjct: 88 NADSSHLVSAGTDKTVRVW-------------DMETGSCIRNFKSHTDIVNSVDVNRRGP 134
Query: 207 DRILSASCDNTVSLWSTNYKE---------MTVIDPMEDLGGNVSTAAKKRRKLTLKDGS 257
I SAS D TV + KE D NV + +K
Sbjct: 135 QMICSASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQ---IKVWD 191
Query: 258 IRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSY--- 314
+ R + H + ++ + + + S S D ++ +WD+ Y
Sbjct: 192 MLRNDVRYVLSGHRDTITSLSVSHNGNFL-LSNSMDCSLMSWDIRPFVPAQRLVARYQGA 250
Query: 315 ------SLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTC 368
+LL P+ N + GS+ R + + N+ S+ +L GH V
Sbjct: 251 SHNFEKNLLKCGWSPRDNYITAGSADRFVYVW----NAKSRACVYKLPGHLGSVNCTALH 306
Query: 369 PENEYMICSASHDGTV 384
P + ++ SA D T+
Sbjct: 307 PTQQILL-SAGSDKTI 321
>CE02005 [R] KOG0288 WD40 repeat protein TipD
Length = 464
Score = 56.2 bits (134), Expect = 9e-08
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 67/322 (20%)
Query: 122 DGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEE 181
D + T L +V+ + S H G + V ++S +AG+D +++W+ +
Sbjct: 155 DEFMMTDVLPSEVKFKLSTHDGEVHDVEWMSDDTFATAGSDSKVQIWRVSPNK------- 207
Query: 182 EIEDGKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVSLWSTNYKEMTVIDPMEDLGG 239
D ++ L G PV +D R L++S D T LW+ +
Sbjct: 208 --TDASKVSTLSGCLGPVNRLDYDSQRHVCLASSNDKTCRLWNID--------------- 250
Query: 240 NVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTW 299
+R L+ G + + LF+SH+ S S D TIK W
Sbjct: 251 -------SQRLLSTFSGHTDKVSSARLFQSHNV---------------ISGSADRTIKNW 288
Query: 300 DLITAKCVDTKTTSYSLLSVAQLPKLNLLACG-SSARHITLH-DPRVN----SSSKITQQ 353
D+ + +C+ + ++ + + CG S + I+ H D +V SS T
Sbjct: 289 DISSIRCLKSYLVGSTVFDI-------VAKCGVSQSSFISSHFDKKVRFWDARSSDATYS 341
Query: 354 QLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXX 413
+G K V +LD + + ++S D T+ + DVR+ ++ + E
Sbjct: 342 VELGQK--VSSLDISMDG-LQVLASSRDDTLSLIDVRNYGIIHLYSAEQYKTSCDSTRAI 398
Query: 414 FAVKWAKGVGIISGGQDKKIQI 435
F+ + G +++G + + I
Sbjct: 399 FS---STGEYVLAGSSNSSVFI 417
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 56.2 bits (134), Expect = 9e-08
Identities = 41/126 (32%), Positives = 67/126 (52%), Gaps = 19/126 (15%)
Query: 103 EDWVSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTR-LVSAG 160
ED V S D + SGS+DG +R ++L+ G+ +++ GH+ + +V + + R +VSA
Sbjct: 67 EDVVLSSD--GQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 161 NDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD----RILSASCDN 216
DRT++LW T + +I E +GHK V + S + I+SAS D
Sbjct: 125 RDRTIKLWNTLGECKYTISEG-----------DGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 217 TVSLWS 222
TV +W+
Sbjct: 174 TVKVWN 179
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 56.2 bits (134), Expect = 9e-08
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 34/216 (15%)
Query: 109 LDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTR-LVSAGNDRTLR 166
L NY SGS+D +R ++L+ GK +++ GH+ + +V + + R +VS D+T++
Sbjct: 72 LSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIK 131
Query: 167 LWKTKNDDLKSIDEEEIEDG-KTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWS--- 222
LW T + +I E+ D + H P+ I+S D TV +W+
Sbjct: 132 LWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPI---------IVSCGWDRTVKVWNLAN 182
Query: 223 ----------TNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSA 272
Y + P G++ T+ K K L D + L E H+
Sbjct: 183 CKLKNNHHGHNGYLNTVTVSP----DGSLCTSGGKDSKALLWD--LNDGKNLYTLE-HND 235
Query: 273 PVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVD 308
+ A+ F S + V+ +IK WDL K V+
Sbjct: 236 IINALCF--SPNRYWLCVAYGPSIKIWDLACKKTVE 269
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 56.2 bits (134), Expect = 9e-08
Identities = 74/321 (23%), Positives = 126/321 (39%), Gaps = 64/321 (19%)
Query: 118 SGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLK 176
S S DG R +++ G+ +GH+ + AV + + + ++ DRT+++W+
Sbjct: 219 SASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRA------ 272
Query: 177 SIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMED 236
DG GH V +I +S D +L P++D
Sbjct: 273 -------ADGILCRTFSGHAHWVNNIALSTDYVLRTG----------------PFHPVKD 309
Query: 237 LGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTI 296
+K L+ ++ L ES +AV D+ + V S S D+T+
Sbjct: 310 -------RSKSHLSLSTEE----------LQESALKRYQAVCPDEVESLV--SCSDDNTL 350
Query: 297 KTWDLITAKCVDTKTTSYSLLS-VAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQL 355
W KCV+ T ++++ V P + L+A S + + L +S
Sbjct: 351 YLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW----RASDGQYMATF 406
Query: 356 VGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFA 415
GH V + ++ +I S S D T+KVW V+ T++ F
Sbjct: 407 RGHVQAVYTVAWSADSR-LIVSGSKDSTLKVWSVQ--------TKKLAQELPGHADEVFG 457
Query: 416 VKWA-KGVGIISGGQDKKIQI 435
V WA G + SGG+DK I++
Sbjct: 458 VDWAPDGSRVASGGKDKVIKL 478
>Hs4504053 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 55.8 bits (133), Expect = 1e-07
Identities = 59/285 (20%), Positives = 107/285 (36%), Gaps = 64/285 (22%)
Query: 114 NYIYSGSYDGIVRTYNLSG-----KVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLW 168
N++ G D + YNL KV ++ S H+G + ++ +V++ D T LW
Sbjct: 110 NFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW 169
Query: 169 KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSASCDNTVSLWSTNYK 226
+IE G+ + GH +S+ VS D +S +CD + LW
Sbjct: 170 -------------DIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWD---- 212
Query: 227 EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTV 286
+++G+ R+ F H + + A+ F + + +
Sbjct: 213 --------------------------VREGTCRQ-----TFTGHESDINAICFFPNGEAI 241
Query: 287 GYSVSQDHTIKTWDLITAK---CVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPR 343
+ S D + + +DL + C ++ + SVA LL G + + D
Sbjct: 242 -CTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSM 300
Query: 344 VNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
+ I L GH N V L + + + S D +K+W+
Sbjct: 301 KSERVGI----LSGHDNRVSCLGVTADG-MAVATGSWDSFLKIWN 340
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 55.5 bits (132), Expect = 2e-07
Identities = 70/284 (24%), Positives = 109/284 (37%), Gaps = 37/284 (13%)
Query: 118 SGSYDGIVRTYNLSGKV-EKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLK 176
S S DG ++ ++ +V + SGH+ + V + L S +DRT+R+W D+
Sbjct: 253 SSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVW-----DIN 307
Query: 177 SIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMED 236
S G+ + IL+ H V + +S D L + T K T + +
Sbjct: 308 S-------QGRCINILKSHAHWVNHLSLSTDYALRIGAFD-----HTGKKPSTPEEAQKK 355
Query: 237 LGGNVSTAAKK-----RRKLTLKD-------GSIRRRAPLALFESHSAPVEAVIFDKSDD 284
N KK +T D ++ P+A H V V F D
Sbjct: 356 ALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAF-SPDG 414
Query: 285 TVGYSVSQDHTIKTWDLITAKCVDT-KTTSYSLLSVAQLPKLNLLACGSSARHITLHDPR 343
S S D++IK WD K + T + S+ VA LL S + + D R
Sbjct: 415 RYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR 474
Query: 344 VNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVW 387
S L GHK+ V +D + + +CS D V++W
Sbjct: 475 TRKLS----VDLPGHKDEVYTVDWSVDGK-RVCSGGKDKMVRLW 513
Score = 55.5 bits (132), Expect = 2e-07
Identities = 40/150 (26%), Positives = 66/150 (43%), Gaps = 18/150 (12%)
Query: 293 DHTIKTWDLITAKCVDTKTTSYS-LLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKIT 351
D+T + WD T + T Y+ +L V+ P ++A GS I L DP+ S +
Sbjct: 165 DNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPK---SGQCL 221
Query: 352 QQQLVGHKNFVVALD------TCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXX 405
L GH ++ +L P ++ + S+S DGT+K+WD S YT++
Sbjct: 222 GDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSV 281
Query: 406 XXXXXXXXFAVKWAKGVGIISGGQDKKIQI 435
VKW + SG D+ +++
Sbjct: 282 S--------CVKWGGQGLLYSGSHDRTVRV 303
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 55.5 bits (132), Expect = 2e-07
Identities = 65/271 (23%), Positives = 108/271 (38%), Gaps = 46/271 (16%)
Query: 102 NEDWVSSLDVGSN--YIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTRLV-S 158
N+D V+SLD S+ + GSYDG R + +G + H GPI A+ + V S
Sbjct: 235 NKD-VTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLS 293
Query: 159 AGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD----------- 207
AG D+T +W + G+ H AP + +D +
Sbjct: 294 AGVDKTTIIW-------------DAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMC 340
Query: 208 -RILSASCDNTVSLWSTNYKEMTVI--DPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPL 264
+ CD+ V + + E+ I DP L + S +TLK S+++ A +
Sbjct: 341 IHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSD------DMTLKIWSMKQDACV 394
Query: 265 ALFESHS--------APVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYS- 315
++HS +P + + + S S D T++ WD+ C T
Sbjct: 395 HDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEP 454
Query: 316 LLSVAQLPKLNLLACGSSARHITLHDPRVNS 346
+ SVA P LA GS +++ + + + S
Sbjct: 455 VYSVAFSPDGKYLASGSFDKYVHIWNTQSGS 485
Score = 55.1 bits (131), Expect = 2e-07
Identities = 74/343 (21%), Positives = 138/343 (39%), Gaps = 57/343 (16%)
Query: 92 LPPS---YLSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNLS-----GKVEK------Q 137
+PP+ L ++E ++ + + S+ + SGS D R +NL+ G + +
Sbjct: 167 IPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 226
Query: 138 YSGHSGP----IRAVHYISSTRLVSAGN-DRTLRLWKTKNDDLKSIDEEEIEDGKTLAIL 192
GH P + ++ + S L++ G+ D R+W E+G + L
Sbjct: 227 EGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW--------------TENGNLASTL 272
Query: 193 EGHKAPVVSIDVSK--DRILSASCDNTVSLWSTNYKEMTVIDPMEDLGG------NVSTA 244
HK P+ ++ +K + +LSA D T +W + E P N T
Sbjct: 273 GQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF 332
Query: 245 AKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITA 304
A + + + P+ F+ H+ V A+ +D S + S S D T+K W +
Sbjct: 333 ASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLA-SCSDDMTLKIWSMKQD 391
Query: 305 KCV-DTKTTSYSLLSVAQLP---------KLNLLACGSSARHITLHDPRVNSSSKITQQQ 354
CV D + S + ++ P +LA S + L D +
Sbjct: 392 ACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD----VEQGVCTHT 447
Query: 355 LVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYT 397
L+ H+ V ++ P+ +Y + S S D V +W+ +S + +++
Sbjct: 448 LMKHQEPVYSVAFSPDGKY-LASGSFDKYVHIWNTQSGSLVHS 489
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 55.5 bits (132), Expect = 2e-07
Identities = 60/289 (20%), Positives = 109/289 (36%), Gaps = 72/289 (24%)
Query: 114 NYIYSGSYDGIVRTYNLSGK-----VEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLW 168
NY+ G D I YNL + V ++ +GH+G + ++ ++V++ D T LW
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169
Query: 169 KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVSLWSTNYK 226
+IE G+ GH V+S+ ++ D +S +CD + LW
Sbjct: 170 -------------DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD---- 212
Query: 227 EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTV 286
+++G R+ F H + + A+ F + +
Sbjct: 213 --------------------------VREGMCRQ-----TFTGHESDINAICFFPNGNAF 241
Query: 287 GYSVSQDHTIKTWDLITAKCVDTKTTSYS-------LLSVAQLPKLNLLACGSSARHITL 339
+ S D T + +DL D + +YS + SV+ LL G + +
Sbjct: 242 A-TGSDDATCRLFDL----RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 340 HDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
D + + L GH N V L ++ + + S D +K+W+
Sbjct: 297 WDALKADRAGV----LAGHDNRVSCLGV-TDDGMAVATGSWDSFLKIWN 340
>At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains DENN domain
Length = 1264
Score = 55.5 bits (132), Expect = 2e-07
Identities = 67/313 (21%), Positives = 126/313 (39%), Gaps = 74/313 (23%)
Query: 116 IYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKND- 173
I SGS D V ++ + ++ ++ GH + V +S R+++A +D T+++W + D
Sbjct: 989 IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVRTDM 1048
Query: 174 ----------DLKSIDEE------------------EIEDGKTLAILEGHKAPVVSIDVS 205
+ S++ + +I GK + L+GH + SI +
Sbjct: 1049 CVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMV 1108
Query: 206 KDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLA 265
+D +++ S D T +W S+ R + A
Sbjct: 1109 EDTLITGSDDWTARVW-----------------------------------SVSRGSCDA 1133
Query: 266 LFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTW--DLITAKCVDTKTT-SYSLLSVAQL 322
+ H+ PV++V + D + + S D ++ W D KCV T S S+LS+
Sbjct: 1134 VLACHAGPVQSVEYSPFDKGI-ITGSADGLLRFWENDEGGIKCVKNITLHSSSILSIN-- 1190
Query: 323 PKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEY---MICSAS 379
N L G++ ++L N+ +K++ QL A+ C ++ ICS
Sbjct: 1191 AGENWLGIGAADNSMSLFHRPSNAGTKVSGWQLYRVPQRTAAVVRCVASDLERKRICSGG 1250
Query: 380 HDGTVKVWDVRSN 392
+G +++WD N
Sbjct: 1251 RNGVLRLWDATIN 1263
>Hs22052079 [R] KOG0266 WD40 repeat-containing protein
Length = 426
Score = 55.1 bits (131), Expect = 2e-07
Identities = 65/273 (23%), Positives = 110/273 (39%), Gaps = 37/273 (13%)
Query: 136 KQYSGHSGPIRAVHY-ISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEG 194
K SGH + H+ + T+L+S D T++LW + DG + E
Sbjct: 96 KILSGHEHAVSTCHFCVDDTKLLSGSYDCTVKLW-------------DPVDGSVVRDFEH 142
Query: 195 H-KAPVVSIDVSKD--RILSASCDNTVS---------LWSTNYKEMTVIDPMEDLGGNVS 242
KAPVV ++ D R+++AS D TV LW Y V G V
Sbjct: 143 RPKAPVVECSITGDSSRVIAASYDKTVRAWDLETGKLLWKVRYDTFIVSCKFSPDGKYVV 202
Query: 243 TAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLI 302
+ + + D + + + H+ + + FD V SVS D IK WD+
Sbjct: 203 SGFDVDHGICIMDAENITTVSV-IKDHHTRSITSCCFDPDSQRVA-SVSLDRCIKIWDVT 260
Query: 303 TAKCVDTKTTSYS--LLSVAQLPKLNLLACGSSARHITLHDPRV----NSSSKITQQQLV 356
+ + T T ++S + + + L S +++ + + N + +T Q
Sbjct: 261 SQATLLTITKAHSNAISNCCFTFSGHFLCTSSWDKNLKIWNVHTGEFRNCGACVTLMQ-- 318
Query: 357 GHKNFVVALDTCPENEYMICSASHDGTVKVWDV 389
GH+ V + ++ ++I S D TV +WDV
Sbjct: 319 GHEGSVSSCHFARDSSFLI-SGGFDRTVAIWDV 350
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 54.7 bits (130), Expect = 3e-07
Identities = 64/303 (21%), Positives = 109/303 (35%), Gaps = 56/303 (18%)
Query: 137 QYSGHSGPIRAVHYI-SSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGH 195
Q GH+ + + S + S G DR + LW D K +L G
Sbjct: 45 QMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNV------------FGDVKNYGVLNGC 92
Query: 196 KAPVVSIDVSKDR--ILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTL 253
K + + S+D + +S D + W + + +K RK
Sbjct: 93 KGAITDLQWSRDSRVVYCSSSDTHLMSWD-------------------AVSGQKIRK--- 130
Query: 254 KDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTS 313
+ H+ V A+ K + SVS D T+K WD + C+ T
Sbjct: 131 -------------HKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEK 177
Query: 314 YSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEY 373
Y L +VA + + G I + D R N S + L GHK+ + +L +
Sbjct: 178 YPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHV----LKGHKDIITSLAISKDGSS 233
Query: 374 MICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAKGVGII-SGGQDKK 432
++ S S D TV+++DV+ + + V W++ + +G DK
Sbjct: 234 LL-SNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKN 292
Query: 433 IQI 435
+ +
Sbjct: 293 VYV 295
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 54.7 bits (130), Expect = 3e-07
Identities = 40/126 (31%), Positives = 67/126 (52%), Gaps = 19/126 (15%)
Query: 103 EDWVSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTR-LVSAG 160
+D V S D + SGS+DG +R ++L+ G+ +++ GH+ + +V + + R +VSA
Sbjct: 67 QDVVLSSD--GQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 161 NDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD----RILSASCDN 216
DRT++LW T + +I E +GHK V + S + I+SAS D
Sbjct: 125 RDRTIKLWNTLGECKYTISE-----------ADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 217 TVSLWS 222
TV +W+
Sbjct: 174 TVKVWN 179
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 54.3 bits (129), Expect = 4e-07
Identities = 69/321 (21%), Positives = 124/321 (38%), Gaps = 35/321 (10%)
Query: 133 KVEKQYSGHSGPIRAVHYISSTR-LVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAI 191
K+ + SGH G +R + + V+ DRT+++W ++ GK
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIW-------------DLASGKLKLS 241
Query: 192 LEGHKAPVVSIDVSKDRILSASC--DNTVSLWSTNYKE--------MTVIDPMEDLGGNV 241
L GH + V + VS SC D V W Y + ++ + + DL +
Sbjct: 242 LTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGL-DLHPTI 300
Query: 242 STAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDL 301
R T + +R +A + H+ V V ++ + + S D TI+ WDL
Sbjct: 301 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI-ITGSHDTTIRLWDL 359
Query: 302 ITAKCVDTKTT-SYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKN 360
+ K T T S+ +V P+ A GS + + S I Q L GH
Sbjct: 360 VAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD---NIKQWKFPDGSFI--QNLSGHNA 414
Query: 361 FVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAK 420
+ L ++ ++ S + +GT+ +WD R+ + FA + +
Sbjct: 415 IINTLTV--NSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQ 472
Query: 421 GVG-IISGGQDKKIQINKGDN 440
+++ DK I++ + D+
Sbjct: 473 SESRLLTAEADKTIKVYREDD 493
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 54.3 bits (129), Expect = 4e-07
Identities = 37/113 (32%), Positives = 58/113 (50%), Gaps = 17/113 (15%)
Query: 113 SNYIYSGSYDGIVRTYN-LSGKVEKQYSGHSGPIRAVHYISSTRLVSAG-NDRTLRLWKT 170
SNY+ +GS D VR ++ L+G + ++GH GPI ++ + + R ++ G D + LW
Sbjct: 639 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-- 696
Query: 171 KNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVSLW 221
+I G + L+GH V S+ S+D + S S DNTV LW
Sbjct: 697 -----------DIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 54.3 bits (129), Expect = 4e-07
Identities = 37/113 (32%), Positives = 58/113 (50%), Gaps = 17/113 (15%)
Query: 113 SNYIYSGSYDGIVRTYN-LSGKVEKQYSGHSGPIRAVHYISSTRLVSAG-NDRTLRLWKT 170
SNY+ +GS D VR ++ L+G + ++GH GPI ++ + + R ++ G D + LW
Sbjct: 584 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-- 641
Query: 171 KNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVSLW 221
+I G + L+GH V S+ S+D + S S DNTV LW
Sbjct: 642 -----------DIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 683
>Hs11055998 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 53.9 bits (128), Expect = 5e-07
Identities = 64/292 (21%), Positives = 108/292 (36%), Gaps = 78/292 (26%)
Query: 114 NYIYSGSYDGIVRTYNLSGK-----VEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLW 168
NY+ G D I YNL + V ++ GH+G + ++ +++V++ D T LW
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALW 169
Query: 169 KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSASCDNTVSLWSTNYK 226
+IE + GH V+S+ +S D +S +CD + LW
Sbjct: 170 -------------DIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWD---- 212
Query: 227 EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTV 286
++DG R+ F H + + AV F +
Sbjct: 213 --------------------------IRDGMCRQS-----FTGHVSDINAVSFFPN---- 237
Query: 287 GYSV---SQDHTIKTWDLITAKCVDTKTTSYS-------LLSVAQLPKLNLLACGSSARH 336
GY+ S D T + +DL D + YS + SVA LL G +
Sbjct: 238 GYAFATGSDDATCRLFDL----RADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFN 293
Query: 337 ITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
+ D + + L GH N V L ++ + + S D +++W+
Sbjct: 294 CNVWDTLKGDRAGV----LAGHDNRVSCLGV-TDDGMAVATGSWDSFLRIWN 340
>7297895 [K] KOG1034 Transcriptional repressor EED/ESC/FIE required for
transcriptional silencing WD repeat superfamily
Length = 462
Score = 53.9 bits (128), Expect = 5e-07
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 71 YLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYN- 129
Y ++ E+ + + P SF W G + + Y G++R +N
Sbjct: 139 YECERSTGQESCEGIRLLQVYADPDTDESFYTCAWSYDSVTGDPVLAAAGYRGVIRIFNP 198
Query: 130 LSGKVEKQYSGHSGPIRAV--HYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGK 187
+ + K Y GH I + H L+S D +LRLW ++D ++
Sbjct: 199 VKHQCSKNYIGHGHAINELKFHPTRPQLLLSGSKDHSLRLWNIQSDVCVAV--------- 249
Query: 188 TLAILEGHKAPVVSI--DVSKDRILSASCDNTVSLW 221
+EGH+ V+S+ D+ DRI+S+ D+++ LW
Sbjct: 250 -FGGVEGHRDEVLSVDFDLRGDRIMSSGMDHSLKLW 284
>Hs14150011_2 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 342
Score = 53.9 bits (128), Expect = 5e-07
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 17/121 (14%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLSGKVE-KQYSGHSGPIRAVHYISS---TRLVSAGN 161
V S+ V +++I G+Y+ ++ +++ K + + +GH G + A+ IS+ T++ SA
Sbjct: 234 VYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASY 293
Query: 162 DRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLW 221
DR+LR+W N T +L H+ V ++ VS+ R+ S + D+TV +W
Sbjct: 294 DRSLRVWSMDNMIC------------TQTLLR-HQGSVTALAVSRGRLFSGAVDSTVKVW 340
Query: 222 S 222
+
Sbjct: 341 T 341
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 53.5 bits (127), Expect = 6e-07
Identities = 62/265 (23%), Positives = 104/265 (38%), Gaps = 38/265 (14%)
Query: 144 PIRAVHYISSTRLV-SAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSI 202
PI V Y + + V +AGN+R +RLW K+ G + GH ++ +
Sbjct: 16 PINVVKYNRTGKYVLAAGNERVVRLWNVKS-------------GACIHEYAGHGHEILDL 62
Query: 203 DVSKDRILSASC--DNTVSLWSTNYKEMTVIDPMEDLGGN---VSTAAKKRRKLTLKDGS 257
D+ D ASC D + +W N ++ LGG+ ++T L GS
Sbjct: 63 DLVYDSTKFASCGGDKFIQVWDVNTGKVD-----RRLGGHLAQINTIRYNEDSSILASGS 117
Query: 258 IRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQ--------DHTIKTWDLITAKCVDT 309
+ L S+S V+ D D +++ D T++T+D I + +
Sbjct: 118 FDSKVRLWDCRSNSFSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYD-IRKGTLSS 176
Query: 310 KTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVAL-DTC 368
S+ + SV + S I L D K +G KN + +
Sbjct: 177 DYFSHPITSVKTSKSASFSLISSLNSSIHLLDQETGKILK----SYIGLKNMEYRVRSSF 232
Query: 369 PENEYMICSASHDGTVKVWDVRSNT 393
++E ++ S S DG V +WD+ + T
Sbjct: 233 NQSETIVFSGSEDGKVYLWDLENET 257
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 53.5 bits (127), Expect = 6e-07
Identities = 54/212 (25%), Positives = 82/212 (38%), Gaps = 14/212 (6%)
Query: 188 TLAILEGHKAPVVSIDVSK--DRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAA 245
T+A+L+ HK + S D + +AS D T LW T+ + + D V+
Sbjct: 290 TIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHP 349
Query: 246 KKRR------KLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTW 299
+ T + I A L L E HS V + F + D + S D + W
Sbjct: 350 SGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ-DGALAASCGLDSLARVW 408
Query: 300 DLITAKCVDTKTTSYS-LLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGH 358
DL T + + + SV P LA G + D R+ S I + H
Sbjct: 409 DLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI----IPAH 464
Query: 359 KNFVVALDTCPENEYMICSASHDGTVKVWDVR 390
N V + P+ Y + +AS+D V +W R
Sbjct: 465 ANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
>At1g24130 [R] KOG4155 FOG: WD40 repeat
Length = 415
Score = 53.5 bits (127), Expect = 6e-07
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 47/212 (22%)
Query: 102 NEDWVSSLDVGSN-YIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTR----L 156
++D ++++ V + ++Y+GS D ++ +N K + + + AV+ ++ + L
Sbjct: 234 HDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVL 293
Query: 157 VSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDN 216
S DR++ +W+ L + D+EE+ + L GH+ ++ + V+ D +LS S D
Sbjct: 294 YSGACDRSILVWER----LINGDDEELHMS-VVGALRGHRKAIMCLAVASDLVLSGSADK 348
Query: 217 TVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEA 276
++ +W RR L K+G + LA+ E H+ PV++
Sbjct: 349 SLRVW--------------------------RRGLMEKEG----YSCLAVLEGHTKPVKS 378
Query: 277 VIFDKSD-------DTVGYSVSQDHTIKTWDL 301
+ SD + YS S D ++K W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 53.5 bits (127), Expect = 6e-07
Identities = 69/293 (23%), Positives = 121/293 (40%), Gaps = 38/293 (12%)
Query: 156 LVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSAS 213
LV+ G D +++W + D+ + + L+GH VVS+ VS D I S+S
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHK----------LKGHALGVVSVAVSSDGQTIASSS 104
Query: 214 CDNTVSLW---STNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRR------RAPL 264
D+T+ LW S + K + P+ DL + K L DG I +A
Sbjct: 105 LDSTMCLWDARSGDKKHLLSFGPV-DLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQ 163
Query: 265 ALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT-KTTSYSLLSVAQLP 323
L + ++ + + S + D I +D+ K V T + + + S+ P
Sbjct: 164 TLDAQNGKYTLSIAYSPDGKYIA-SGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSP 222
Query: 324 KLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGT 383
LL S H+ L+D V S + L GH ++V+ + + ++ S+S D +
Sbjct: 223 NSQLLLTASDDGHMKLYD--VTHSDVVGT--LSGHASWVLCVAFSEDGKHF-ASSSSDNS 277
Query: 384 VKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAKGVG-IISGGQDKKIQI 435
VK+WD ++T + V+++ G + S +DK + I
Sbjct: 278 VKIWDTSERKCLHTFAEH--------TDQVWGVRYSPGNDKVASASEDKSLNI 322
Score = 52.4 bits (124), Expect = 1e-06
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 17/117 (14%)
Query: 115 YIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYI-SSTRLVSAGNDRTLRLWKTKN 172
YI SG+ DGI+ ++++ GKV + GH+ P+R++ + +S L++A +D ++L+ +
Sbjct: 184 YIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTH 243
Query: 173 DDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSASCDNTVSLWSTNYKE 227
D+ + L GH + V+ + S+D S+S DN+V +W T+ ++
Sbjct: 244 SDV-------------VGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERK 287
>Hs11128017 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 713
Score = 53.1 bits (126), Expect = 8e-07
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 38/267 (14%)
Query: 138 YSGHSGPIRAVHYISS-TRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLA-ILEGH 195
+ H GP+ ++ S+ + S G D T++ W N S+D + + LA L GH
Sbjct: 445 FRAHIGPVLSLAISSNGEQCFSGGIDATIQWW---NMPSPSVDPYDTYEPNVLAGTLVGH 501
Query: 196 KAPVVSIDVS--KDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTAAKKRRKLTL 253
V + S K+++LS S D TV LW+ P E L +
Sbjct: 502 TDAVWGLAYSGIKNQLLSCSADGTVRLWN----------PQEKLPC-----------ICT 540
Query: 254 KDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTS 313
+G + P ++ P V + V Y + ++ +I + VD+ S
Sbjct: 541 YNGDKKHGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSL----VILSSQVDSGLQS 596
Query: 314 YSLLS-VAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENE 372
+ ++ V P L + RHI D N + K+ +V H + V +L P
Sbjct: 597 NNHINRVVSHPTLPVTITAHEDRHIKFFD---NKTGKMIHS-MVAHLDAVTSLAVDPNGI 652
Query: 373 YMICSASHDGTVKVWDVRSNTAMYTIT 399
Y++ S SHD ++++W++ S T + IT
Sbjct: 653 YLM-SGSHDCSIRLWNLDSKTCVQEIT 678
>YKR036c [R] KOG4155 FOG: WD40 repeat
Length = 659
Score = 52.8 bits (125), Expect = 1e-06
Identities = 66/289 (22%), Positives = 113/289 (38%), Gaps = 72/289 (24%)
Query: 141 HSGPIRAVHYIS--STRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAP 198
H I A+ + + T S+ DR +++W ++ G + L GH A
Sbjct: 334 HGNSITALDFDTPWGTLCSSSYQDRIVKVW-------------DLNHGIQVGELPGHLAT 380
Query: 199 VVSIDVSK---DRILSASCDNTVSLWSTNYKEMTVID--PMEDLGGNVSTAAKKRRKLTL 253
V + + K + +++ S D T+ LW N +D P+++ + T
Sbjct: 381 VNCMQIDKKNYNMLITGSKDATLKLWDLNLSREIYLDHSPLKEKTEEIVTPC-------- 432
Query: 254 KDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV------ 307
+ FE H + A+ FD G S+D I WDL T KC+
Sbjct: 433 ----------IHNFELHKDEITALSFDSEALVSG---SRDKKIFHWDLTTGKCIQQLDLI 479
Query: 308 ------DTKTTSYSL-----LSVAQLPKLNLLACGSSARH-------ITLHDPRVNSSSK 349
D K + SL L + P + L C +SA + L D RV +
Sbjct: 480 FTPTHSDIKMPARSLNNGACLLGTEAPMIGALQCYNSALATGTKDGIVRLWDLRVGKPVR 539
Query: 350 ITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTI 398
+ L GH + + +L E + + S D +V++WD+R+++ + I
Sbjct: 540 L----LEGHTDGITSLKFDSEK---LVTGSMDNSVRIWDLRTSSILDVI 581
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 52.8 bits (125), Expect = 1e-06
Identities = 48/174 (27%), Positives = 74/174 (41%), Gaps = 19/174 (10%)
Query: 268 ESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT-KTTSYSLLSVAQLPKLN 326
E HS V +V F + + S S D T++ WDL T T K + +LS++ P
Sbjct: 111 EGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 327 LLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALD-----TCPENEYMICSASHD 381
LA G I L DP S+ K + L GH ++ L PE Y + S+S D
Sbjct: 170 KLASGCKNGQILLWDP---STGKQVGRTLAGHSKWITGLSWEPLHANPECRY-VASSSKD 225
Query: 382 GTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAKGVGIISGGQDKKIQI 435
G+V++WD + +T ++W + S QD+ I++
Sbjct: 226 GSVRIWDTTAGRCERILTGHTQSVT--------CLRWGGDGLLYSASQDRTIKV 271
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 52.8 bits (125), Expect = 1e-06
Identities = 57/216 (26%), Positives = 89/216 (40%), Gaps = 44/216 (20%)
Query: 187 KTLAILEGHKAPV--VSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNVSTA 244
K +++GH V V+ D S + + S D T+ +W +V+T
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW------------------DVATG 208
Query: 245 AKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITA 304
K LTL G I + LA+ H T +S D +K WDL
Sbjct: 209 VLK---LTLT-GHIEQVRGLAVSNRH--------------TYMFSAGDDKQVKCWDLEQN 250
Query: 305 KCVDTKTTSYS-LLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVV 363
K + + S + +A P L++L G + D R +K+ L GH N V
Sbjct: 251 KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR----TKMQIFALSGHDNTVC 306
Query: 364 ALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTIT 399
++ T P + ++ + SHD T+K WD+R M T+T
Sbjct: 307 SVFTRPTDPQVV-TGSHDTTIKFWDLRYGKTMSTLT 341
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 52.4 bits (124), Expect = 1e-06
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 59/271 (21%)
Query: 43 VNHLLELPKSMPFDFLIDGELLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDN 102
+NH L++ K D E + +++Y G S Y + F +
Sbjct: 10 LNHDLQVQKDQKGVVEEDEEQIHKRIRNYESHSGFSE----------------YCTLFGH 53
Query: 103 EDWVSSLDVGSN--YIYSGSYDGIVRTYN-LSGKVEKQYSGHSGPIRAVHYISSTR-LVS 158
E V+ + V N +I + S DG ++ ++ L+ ++E GH I V + + ++ L S
Sbjct: 54 EKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLAS 113
Query: 159 AGNDRTLRLW-----------KTKNDDLKSIDEE------------------EIEDGKTL 189
A +D+T+R+W K + + SID ++DG L
Sbjct: 114 ASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCL 173
Query: 190 AILEGHKAPVVSIDVSKDRIL--SASCDNTVSLWSTNYKE--MTVIDPMEDLGGNVSTAA 245
+L H P++S+ +S D L +AS D +W + T+++P+ N+
Sbjct: 174 RMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTE 233
Query: 246 KKRRKLT------LKDGSIRRRAPLALFESH 270
++ L ++ RR + +F+SH
Sbjct: 234 NRKYLLVSNLNSQIRLWDYRRNRVVRIFDSH 264
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 52.4 bits (124), Expect = 1e-06
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 23/241 (9%)
Query: 162 DRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPV--VSIDVSKDRILSASCDNTVS 219
D ++ L+ + N+ + + + E + +++ GH PV VSI K+ ILS S D
Sbjct: 370 DSSIHLYSSTNNGPQPLVGSQNEPLQKSSLI-GHTRPVFGVSISPQKEFILSCSEDGFTR 428
Query: 220 LWSTNYKEMTV-----IDPMEDL-----GGNVSTAAKKRRKLTLKDGSIRRRAPLALFES 269
LWS + K V P+ D+ G +TA+ + T + + APL +F
Sbjct: 429 LWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQ---TARLWDVEHAAPLRVFVG 485
Query: 270 HSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNL-L 328
H V+ V F + + + S DHT + WD+ T V +S +S + L L
Sbjct: 486 HQNDVDCVSFHPNAAYLA-TGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSL 544
Query: 329 ACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
A + I + D R S V H + V +L +N+ ++ S D V WD
Sbjct: 545 ASADESGIIKVWDLR----SSNQHVSFVKHSSIVYSLSFSYDNKILV-SGGADTDVNFWD 599
Query: 389 V 389
+
Sbjct: 600 L 600
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 52.4 bits (124), Expect = 1e-06
Identities = 71/301 (23%), Positives = 118/301 (38%), Gaps = 52/301 (17%)
Query: 114 NYIYSGSYDGIVRTYNLSGKVEKQ-YSGHSGPIRAVHYI----------SSTRLVSAGND 162
N+ SGS+ G V+ +N E Q + GH+ + + + L + D
Sbjct: 185 NHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAAD 244
Query: 163 RTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPV--VSIDVSKDRILSASCDNTVSL 220
T+ LWK L LEGH A V V+ S D ++SAS D T L
Sbjct: 245 NTVCLWKASQST-------------PLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRL 291
Query: 221 WSTNYKEMTVIDPMEDLG---GNVSTAAKKRRKLTLKDGS--------IRRRAPLALFES 269
W + T ++ + G G S A + L G+ +R + + +
Sbjct: 292 WDVH----TGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE 347
Query: 270 HSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLNL-- 327
H + A+ + + + S S D T+K WDL T SL+S + + +
Sbjct: 348 HIRQIVAMAWSPNGYQLATS-SADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNR 406
Query: 328 -LACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKV 386
+A + L +P S K +VGH+ V+++D + S+ +D T+K+
Sbjct: 407 FIATSGYDGCVKLWNPLNCSLIK----SMVGHEEKVMSVDGYGDR---FISSGYDRTIKL 459
Query: 387 W 387
W
Sbjct: 460 W 460
Score = 51.6 bits (122), Expect = 2e-06
Identities = 42/137 (30%), Positives = 66/137 (47%), Gaps = 7/137 (5%)
Query: 263 PLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITA-KCVDTKTTSYSLLSVAQ 321
PL E H A V V F S D + S S D T + WD+ T + + + S + S+A
Sbjct: 257 PLLRLEGHLARVGRVAFHPSGDYL-VSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIAC 315
Query: 322 LPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHD 381
P +L++ G + + D R S + + H +VA+ P N Y + ++S D
Sbjct: 316 QPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE----HIRQIVAMAWSP-NGYQLATSSAD 370
Query: 382 GTVKVWDVRSNTAMYTI 398
TVK+WD+R + +TI
Sbjct: 371 DTVKIWDLRKVSLAHTI 387
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 52.4 bits (124), Expect = 1e-06
Identities = 65/283 (22%), Positives = 114/283 (39%), Gaps = 49/283 (17%)
Query: 136 KQYSGHSGPIRAVHYISSTRLV-SAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEG 194
K GH+ I V + + L+ SA D+T+ LW N L + EG
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSL-------------IHRYEG 83
Query: 195 HKAPVVSIDVSKDR--ILSASCDNTVSLWS--------------TNYKEMTVIDPMEDLG 238
H + + + S D SAS D T+ +W TN+ +P +L
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL- 142
Query: 239 GNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKT 298
VS + + T++ ++ + + ++HS P+ +V F++ D ++ S S D + K
Sbjct: 143 -IVSGSFDE----TIRIWEVKTGKCVRMIKAHSMPISSVHFNR-DGSLIVSASHDGSCKI 196
Query: 299 WDLITAKC----VDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQ 354
WD C +D K+ + S + K L+A S ++ N ++ +
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLS------NYATGKFLKV 250
Query: 355 LVGHKNFVVALDTC--PENEYMICSASHDGTVKVWDVRSNTAM 395
GH N V + + N I S S D V +WD+++ +
Sbjct: 251 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL 293
>SPBC428.19c [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 494
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/142 (27%), Positives = 63/142 (43%), Gaps = 13/142 (9%)
Query: 118 SGSYDGIVRTYNLS-GKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLK 176
SGS D V+ ++LS G V+ SGH +R ++S+TRLVS G D T+RLW T+
Sbjct: 141 SGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTR----- 195
Query: 177 SIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWSTNYKEMTVIDPMED 236
I D + ++ G VV S ++SA ++ +W T + +
Sbjct: 196 ------IADPEVMSFSHGEAIDVVLPMQSGSTVISAG-GPSIKVWDLVAGRQTPTKKLSN 248
Query: 237 LGGNVSTAAKKRRKLTLKDGSI 258
+++ A L G +
Sbjct: 249 HQKSITCLAMNSENTRLLSGGL 270
>SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 314
Score = 52.0 bits (123), Expect = 2e-06
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 289 SVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQL---PKLNLLACGSSARHITLHDPRVN 345
S DHTI+ W+ ++ C ++T ++ V +L P LA + H+ L+D +N
Sbjct: 15 SSGYDHTIRFWEALSGIC--SRTIQHADSQVNRLCISPDKKFLAAAGNP-HVRLYD--IN 69
Query: 346 SSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRS 391
+SS++ GH N V A+ + +++ S S DGTVKVWD+R+
Sbjct: 70 TSSQMPLMTFEGHTNNVTAIAFHCDGKWLATS-SEDGTVKVWDMRA 114
>At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 52.0 bits (123), Expect = 2e-06
Identities = 73/290 (25%), Positives = 116/290 (39%), Gaps = 50/290 (17%)
Query: 138 YSGHSGPIRAVHYI-SSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHK 196
Y GHSG + S+RL++ D+T +LW +++ GK L +
Sbjct: 48 YRGHSGAVWCCDISRDSSRLITGSADQTAKLW-------------DVKSGKELFTFK-FG 93
Query: 197 APVVSIDVS-KDRILSASCDNTVSLWSTNYKEMTVIDPMEDLGGNV----STAAKKRRKL 251
AP S+D S D + + D+ V S + + DP + +G +V S KK+
Sbjct: 94 APARSVDFSVGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINR 153
Query: 252 TL------------KDGSIR-----RRAPLALFESHSAPVEAV--IFDKSDDTVGYSVSQ 292
+ +D +IR L + EA+ + +DD+ + S
Sbjct: 154 AVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSH 213
Query: 293 DHTIKTWDLITAKCVDTKTTSYSLLSVAQLPKLN--LLACGSSARHITLHDPRVNS---- 346
D T K WD+ T + T TT + +VA P LN +L G A +T D R
Sbjct: 214 DKTAKLWDMRTLTLIKTYTTVVPVNAVAMSPLLNHVVLGGGQDASAVTTTDHRAGKFEAK 273
Query: 347 -SSKITQQQL---VGHKNFVVALDTCPENEYMICSASHDGTVKVWDVRSN 392
I Q+++ GH + AL P+ + S DG V++ SN
Sbjct: 274 FYDTILQEEIGGVKGHFGPINALAFSPDGK-SFSSGGEDGYVRLHHFDSN 322
>At1g24530 [R] KOG4155 FOG: WD40 repeat
Length = 418
Score = 52.0 bits (123), Expect = 2e-06
Identities = 56/258 (21%), Positives = 109/258 (41%), Gaps = 36/258 (13%)
Query: 75 KGLSSETFLNVEYTRAVLPPSYLSS--------FDNEDWVSSLDVGSNYIYSGSYDGIVR 126
K L++ LN R LP +Y+ ++ D V++L V +IYS S+D ++
Sbjct: 159 KQLTTLPTLNDRLRRFALPKNYVQVRRHKKRLWIEHADAVTALAVSDGFIYSVSWDKTLK 218
Query: 127 TYNLSG-KVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSIDEEEIED 185
+ S + ++ H + A+ ++ + + DR +R+W + +
Sbjct: 219 IWRASDLRCKESIKAHDDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGEKRH-------- 270
Query: 186 GKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVSLW----STNYKEM--------TVI 231
+A LE HK+ V ++ ++ D + S SCD ++ +W ++NY + I
Sbjct: 271 -TLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI 329
Query: 232 DPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVE---AVIFDKSDDTVG- 287
+ ++ + + + R + G + L + H+ PV+ AV + DD V
Sbjct: 330 LSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSI 389
Query: 288 YSVSQDHTIKTWDLITAK 305
S S D +K W + K
Sbjct: 390 ISGSLDGEVKCWKVSVTK 407
Score = 49.7 bits (117), Expect = 9e-06
Identities = 54/242 (22%), Positives = 97/242 (39%), Gaps = 24/242 (9%)
Query: 199 VVSIDVSKDRILSASCDNTVSLWS----TNYKEMTVIDPMEDLGGNVSTAAKKRRKLTLK 254
V S+ S ++I +A D + +W + YK++T + + D + R+ L
Sbjct: 128 VKSVGFSGEKIFTAHQDGKIGVWKLTAKSGYKQLTTLPTLND----------RLRRFALP 177
Query: 255 DGSIR-RRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTS 313
++ RR L+ H+ V A+ D YSVS D T+K W +C ++
Sbjct: 178 KNYVQVRRHKKRLWIEHADAVTALAVS---DGFIYSVSWDKTLKIWRASDLRCKESIKAH 234
Query: 314 YSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEY 373
++ + + GS+ R I + L HK+ V AL ++
Sbjct: 235 DDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNAL-ALNDDGS 293
Query: 374 MICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAKGVGIISGGQDKKI 433
++ S S D ++ VW+ R +T+ Y R F V ++SG D+ +
Sbjct: 294 VLFSGSCDRSILVWE-REDTSNYMAVRGALRGHDKAILSLFNVSDL----LLSGSADRTV 348
Query: 434 QI 435
+I
Sbjct: 349 RI 350
>7303130 [R] KOG0645 WD40 repeat protein
Length = 335
Score = 52.0 bits (123), Expect = 2e-06
Identities = 82/320 (25%), Positives = 122/320 (37%), Gaps = 57/320 (17%)
Query: 114 NYIYSGSYDGIVRTYNLSGKVEKQYS----GHSGPIRAVHYISSTR-LVSAGNDRTLRLW 168
N S D +R ++L+G + GH IR + + + L SA D T +W
Sbjct: 27 NVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIW 86
Query: 169 KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLW------S 222
KS E E A LEGH+ V S+ S+ L A+C S+W
Sbjct: 87 S------KSSGEFECN-----ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGD 135
Query: 223 TNYKEMTVIDP-MEDLGGNVSTAAKKRRKLTLKDGSIRRRAP---------LALFESHSA 272
++ V++P +D+ V K D +I+ A A SH++
Sbjct: 136 DEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTS 195
Query: 273 PVEAVIFDKSDDTVGYSVSQDHTIKTW--------------DLITA-KCVDTKTTSYSL- 316
V + FD + + S S D TIK W D T KCV T + +S
Sbjct: 196 TVWGIDFDADGERL-VSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRA 254
Query: 317 ---LSVAQLPKLNLLACGSSARHITLHD----PRVNSSSKITQQQLVGHKNFVVALDTCP 369
+S +L L ACG I P + +IT ++ H V ++ P
Sbjct: 255 IYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQITAEE-GAHDQDVNSVQWNP 313
Query: 370 ENEYMICSASHDGTVKVWDV 389
+ S S DGT+K+W V
Sbjct: 314 VVAGQLISCSDDGTIKIWKV 333
>Hs7662430 [S] KOG0300 WD40 repeat-containing protein
Length = 494
Score = 51.6 bits (122), Expect = 2e-06
Identities = 77/273 (28%), Positives = 107/273 (38%), Gaps = 42/273 (15%)
Query: 136 KQYSGHSGPIRAVHYISSTRLV--SAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILE 193
K+Y GH I V + +V +A D T LW IE GK L
Sbjct: 150 KEYIGHRDGIWDVSVAKTQPVVLGTASADHTALLWS-------------IETGKCLVKYA 196
Query: 194 GHKAPVVSIDV--SKDRILSASCDNTVSLWSTNYKEMTVIDPMED--LGGNVSTAAKKRR 249
GH V SI S+ L+AS D T +W ++ P+ D + G +
Sbjct: 197 GHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAV-QLPTPQPVADTSISGEDEVECSDKD 255
Query: 250 KLTLKDGSIRR-----RAPLALFESHSAPVEAVIFDKSDDTVG----YSVSQDHTIKTWD 300
+ L DG + R PL +SH V A SD VG + S D T +D
Sbjct: 256 EPDL-DGDVSSDSPTIRVPLTSLKSHQGVVIA-----SDWLVGGKQAVTASWDRTANLYD 309
Query: 301 LITAKCVDTKTT-SYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHK 359
+ T++ V + T L P L+ S L D R S + Q GH
Sbjct: 310 VETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQ--GHT 367
Query: 360 NFVV-ALDTCPENEYMICSASHDGTVKVWDVRS 391
+ V A+ T +N + S S D TVKVWD+++
Sbjct: 368 DTVTSAVFTVGDN---VVSGSDDRTVKVWDLKN 397
Score = 51.2 bits (121), Expect = 3e-06
Identities = 56/272 (20%), Positives = 119/272 (43%), Gaps = 42/272 (15%)
Query: 131 SGKVEKQYSGHSGPIRAVHYISSTRL-VSAGNDRTLRLWK----------------TKND 173
+GK +Y+GH G + ++ + S +L ++A D+T +W+ + D
Sbjct: 188 TGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPTPQPVADTSISGED 247
Query: 174 DLKSIDEEEIE-------DGKTLAI----LEGHKAPVVSID--VSKDRILSASCDNTVSL 220
+++ D++E + D T+ + L+ H+ V++ D V + ++AS D T +L
Sbjct: 248 EVECSDKDEPDLDGDVSSDSPTIRVPLTSLKSHQGVVIASDWLVGGKQAVTASWDRTANL 307
Query: 221 WSTNYKEM--TVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRR---RAP----LALFESHS 271
+ E+ ++ ++L + ++ + +D + R R P + +F+ H+
Sbjct: 308 YDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHT 367
Query: 272 APVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKC-VDTKTTSYSLLSVAQLPKLNLLAC 330
V + +F D+ V S S D T+K WDL + + T T ++ + ++A
Sbjct: 368 DTVTSAVFTVGDNVV--SGSDDRTVKVWDLKNMRSPIATIRTDSAINRINVCVGQKIIAL 425
Query: 331 GSSARHITLHDPRVNSSSKITQQQLVGHKNFV 362
R + L D +++ + GH+ V
Sbjct: 426 PHDNRQVRLFDMSGVRLARLPRSSRQGHRRMV 457
>YKL213c [I] KOG0301 Phospholipase A2-activating protein (contains WD40
repeats)
Length = 715
Score = 51.2 bits (121), Expect = 3e-06
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 25/184 (13%)
Query: 111 VGSNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWK 169
V + S S DG+++ ++ +G V + Y GH + + + + +VS G DRT+R+W
Sbjct: 188 VDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWS 247
Query: 170 TKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSID-VSKDRILSASCDNTVSLWSTNYKEM 228
+N LK + TL + + S+D +S I+ S DN V ++S
Sbjct: 248 KENGSLKQV--------ITLPAIS-----IWSVDCMSNGDIIVGSSDNLVRIFSQEKSRW 294
Query: 229 TVIDPMEDLGGNVSTAAKKRRKLTLKDGSI----------RRRAPLALFESHSAPVEAVI 278
D + +L V + + + + + R+ + + +S +EA
Sbjct: 295 ASEDEINELSTQVEKSTISSKTIEFDESKLSPYEILQSPGRKEGQIVVVKSPQGTIEAHQ 354
Query: 279 FDKS 282
F S
Sbjct: 355 FSNS 358
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 51.2 bits (121), Expect = 3e-06
Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 78/292 (26%)
Query: 114 NYIYSGSYDGIVRTYNLSGK-----VEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLW 168
N++ G D I Y+L + V ++ GH+G + ++ +++++ D T LW
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALW 169
Query: 169 KTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD--RILSASCDNTVSLWSTNYK 226
+IE G+ GH V+S+ ++ D +S +CD ++ LW
Sbjct: 170 -------------DIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD---- 212
Query: 227 EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTV 286
++D R+ F H + + AV F +
Sbjct: 213 --------------------------VRDSMCRQ-----TFIGHESDINAVAFFPN---- 237
Query: 287 GYSV---SQDHTIKTWDLITAKCVDTKTTSYS-------LLSVAQLPKLNLLACGSSARH 336
GY+ S D T + +DL D + YS + SVA LL G +
Sbjct: 238 GYAFTTGSDDATCRLFDL----RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 293
Query: 337 ITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWD 388
+ D + + L GH N V L ++ + + S D +K+W+
Sbjct: 294 CNIWDAMKGDRAGV----LAGHDNRVSCLGV-TDDGMAVATGSWDSFLKIWN 340
>YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 535
Score = 50.8 bits (120), Expect = 4e-06
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 123 GIVRTYNLSGKVEK-QYSGHSGPIRAVHYISSTR-LVSAGNDRTLRLWKTKNDDLKSIDE 180
G + Y ++ K + GH GPI + + + + L+SA +D TLR+W N
Sbjct: 339 GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN-------- 390
Query: 181 EEIEDGKTLAILEGHKAPVVSID-VSKDRILSASCDNTVSLWSTNYK---EMTVIDPMED 236
G + GH +VS V D+++S S D +V LWS ++++D +
Sbjct: 391 -----GNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPI 445
Query: 237 LGGNVSTAAKK--------------RRKLTLKDGS-------IRRRAPLALFESH-SAPV 274
G +S +K +KL K S I P+ L+ S+ S+
Sbjct: 446 FAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD 505
Query: 275 EAVIFDKSDDTVGYSVSQDHTIKTWDLI 302
IFD S + G +S ++++ ++
Sbjct: 506 NDYIFDLSWNCAGNKISVAYSLQEGSVV 533
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 50.8 bits (120), Expect = 4e-06
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 59/279 (21%)
Query: 129 NLSGKVEKQYS-GHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSID-------- 179
++SGK+E + H G + Y+ + A KT + D+ D
Sbjct: 110 SVSGKIEIEIKINHEGEVNRARYMPQNPCIIAT--------KTPSSDVLVFDYTKHPSKP 161
Query: 180 EEEIEDGKTLAILEGHKAPVVSIDVSKD---RILSASCDNTVSLWSTNYKEMTVIDPMED 236
+ E L L GH+ + + + +LSAS D+T+ LW
Sbjct: 162 DPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLW--------------- 205
Query: 237 LGGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTI 296
++S K+ + + K +F H+A VE V + +++ SV+ D +
Sbjct: 206 ---DISAVPKEGKVVDAK----------TIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 297 KTWDLIT------AKCVDTKTTSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKI 350
WD + + VD T + LS + +LA GS+ + + L D R + K+
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF-ILATGSADKTVALWDLR---NLKL 308
Query: 351 TQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVWDV 389
HK+ + + P NE ++ S+ D + VWD+
Sbjct: 309 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 677
Score = 50.8 bits (120), Expect = 4e-06
Identities = 60/254 (23%), Positives = 107/254 (41%), Gaps = 33/254 (12%)
Query: 200 VSIDVSKDRILSASCDNTVSLWSTN-YKEMTVIDPMED---------LGGNVSTAAKKRR 249
+ +D + +R+ +A D+ + +WS N +K+ I ME L N T
Sbjct: 36 LQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASS 95
Query: 250 KLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCV-- 307
T+K + + ++ +H V+A+ + K + V S D I WD+ T +
Sbjct: 96 DTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA-SAGLDRQIFLWDVNTLTALTA 154
Query: 308 --DTKTTSY------SLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLVGHK 359
+T TTS S+ S+A ++ GS+ + + + DPR + +K+ +L GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPR--TCAKL--MKLKGHT 210
Query: 360 NFVVALDTCPENEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWA 419
+ V AL + + S S DGT+++W + + T F
Sbjct: 211 DNVKALLLNRDGTQCL-SGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAF----- 264
Query: 420 KGVGIISGGQDKKI 433
+ SGG+D+KI
Sbjct: 265 --THVYSGGRDRKI 276
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 50.8 bits (120), Expect = 4e-06
Identities = 38/127 (29%), Positives = 58/127 (44%), Gaps = 12/127 (9%)
Query: 97 LSSFDNEDWVSSLDVGSNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIRAVHY-ISST 154
L N + + + SN I SGS+D VR +++ +GK K HS P+ AVH+ +
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS 184
Query: 155 RLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASC 214
+VS+ D R+W T + KTL + V + IL+A+
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCL----------KTLIDDDNPPVSFVKFSPNGKYILAATL 234
Query: 215 DNTVSLW 221
DNT+ LW
Sbjct: 235 DNTLKLW 241
>At4g32551 [R] KOG0266 WD40 repeat-containing protein
Length = 930
Score = 50.8 bits (120), Expect = 4e-06
Identities = 69/284 (24%), Positives = 109/284 (38%), Gaps = 56/284 (19%)
Query: 145 IRAVHYISSTR-LVSAGNDRTLRLWKTKNDDLKSIDEEE---IED--------------- 185
+ H+ S + L SAG+D+ LW T K+ EE I D
Sbjct: 661 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSF 720
Query: 186 ----GKTLAILEGHKAPVVSID---VSKDRILSASCDNTVSLWSTNYKEMTVIDPMEDLG 238
G +L GH + V S+D + D I S DN + WS N T + G
Sbjct: 721 DKTKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYK----G 776
Query: 239 GNVSTAAKKRRKLTLKDGS--------IRRRAPLALFESHSAPVEAVIFDKSDDTVGYSV 290
G+ + R L S + +A + H+ P+ +V +D S D + SV
Sbjct: 777 GSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLA-SV 835
Query: 291 SQDHTIKTWDLITA---KCVDTKTTS----YSLLSVAQLPKLNLLACGSSARHITLHDPR 343
S+D +K W L T +CV + + S + P L ++ C S + + +
Sbjct: 836 SED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENK 894
Query: 344 VNSSSKITQQQLVGHKNFVVALDTCPENEYMICSASHDGTVKVW 387
+ L H+ + +L ++ SASHD VK+W
Sbjct: 895 TMT--------LPAHEGLITSLAVSTATG-LVASASHDKLVKLW 929
>At1g80710 [S] KOG4328 WD40 protein
Length = 516
Score = 50.8 bits (120), Expect = 4e-06
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 266 LFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDTKTTSYSLLSVAQLPK- 324
LF HSAPV +++F ++ + S S D I+ D+ + +T ++ S++Q P
Sbjct: 258 LFTPHSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVEKSVFDLVYSTDEAIFSLSQRPND 317
Query: 325 ------------LNL--LACGSSARHITLHDPRVNSSSKITQQQLVGHKNFVVALDTCPE 370
N+ L G S H LH+ R+NS +D P+
Sbjct: 318 EQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINS------------------IDFNPQ 359
Query: 371 NEYMICSASHDGTVKVWDVRSNTAMYTITREXXXXXXXXXXXXFAVKWAKGVGIISGGQD 430
N +++ ++S DGT +WD+RS A T F+ G+ + + D
Sbjct: 360 NPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFS---PSGLSLATTSLD 416
Query: 431 KKIQINKGDN 440
I + G N
Sbjct: 417 NYIGVLSGAN 426
>7303128 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 774
Score = 50.8 bits (120), Expect = 4e-06
Identities = 38/132 (28%), Positives = 61/132 (45%), Gaps = 11/132 (8%)
Query: 98 SSFDNEDWVSSLDVGSNY--IYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTR 155
S F ++ V+S+D S I +G D +R + ++ + + Y+GH I V YI+
Sbjct: 293 SLFGHQTAVTSIDALSRERAITAGGSDCSLRIWKITEESQLIYNGHKDSIECVKYINDEH 352
Query: 156 LVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKA---PVVSIDVSKDRILSA 212
VS G D + LW K I ++ G + E A +++ V+ D + +
Sbjct: 353 FVSGGMDGAIGLWSALKK--KPICTTQLAHG----VGENGVANWITAIAVVVNTDLVATG 406
Query: 213 SCDNTVSLWSTN 224
SCD V LW TN
Sbjct: 407 SCDGCVRLWQTN 418
>7302600 [R] KOG4155 FOG: WD40 repeat
Length = 1240
Score = 50.8 bits (120), Expect = 4e-06
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 106 VSSLDVGSN--YIYSGSYDGIVRTYNLS-GKVEKQYSGHSGPI-RAVHYISSTRLVSAGN 161
VS L N ++ +GS D +V +NL+ G++ + GH+ P+ + V + S R++S
Sbjct: 787 VSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDR 846
Query: 162 DRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVS 219
D L +W + +L L+ + P S+ V+ + +S + DNT+
Sbjct: 847 DSMLLVWMAHSGNL----------------LQTIQGPYKSLSVTNNMRFAVSTNGDNTLK 890
Query: 220 LWSTNYK----------EMTVIDPMEDLGGNVSTAAKKRRKLTLKDGSIRRRAPLALFES 269
+WS + E+T + D +S + R ++LK +
Sbjct: 891 IWSLTQEDEKYSVSHSDEITCFEISADSVHIISGS----RDMSLKVWQATGGKLSQVLVG 946
Query: 270 HSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAKCVDT 309
HS V V ++ T S S+D + WDL+T + V T
Sbjct: 947 HSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEEVHT 986
>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 923
Score = 50.4 bits (119), Expect = 5e-06
Identities = 44/153 (28%), Positives = 69/153 (44%), Gaps = 8/153 (5%)
Query: 238 GGNVSTAAKKRRKLTLKDGSIRRRAPLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIK 297
G V TA++ + +K I LA FE H++ V AV F K + +S S D T++
Sbjct: 357 GSRVVTASEDGK---IKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVM-FSSSLDGTVR 412
Query: 298 TWDLITAKCVDTKT-TSYSLLSVAQLPKLNLLACGSSARHITLHDPRVNSSSKITQQQLV 356
WDLI + T T T + + + C S + +H V + + L
Sbjct: 413 AWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLL--DALS 470
Query: 357 GHKNFVVALDTCPENEYMICSASHDGTVKVWDV 389
GH+ V L EN ++ SAS D T+++W +
Sbjct: 471 GHEGPVSCLSFSQENS-VLASASWDKTIRIWSI 502
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 50.4 bits (119), Expect = 5e-06
Identities = 35/113 (30%), Positives = 59/113 (51%), Gaps = 8/113 (7%)
Query: 115 YIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTR-LVSAGNDRTLRLWKTK-- 171
+I +GS D ++R + SG + +Q GH + +V + + LVS D T++LW+ +
Sbjct: 431 FIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCV 490
Query: 172 NDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKDR--ILSASCDNTVSLWS 222
++ S+ + E G GHK ++S+ VS D I+S S D T+ WS
Sbjct: 491 SNVAPSMYK---EGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS 540
>7291600 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 328
Score = 50.4 bits (119), Expect = 5e-06
Identities = 54/226 (23%), Positives = 103/226 (44%), Gaps = 37/226 (16%)
Query: 97 LSSFDNEDWVSSL--DVGSNYIYSGSYDGIVRTYNLSGKVEK--QYSGHSGPIRAVHYIS 152
+ SF ++ V S+ D S I +GS + +VR +NL + +Y+GH+G I+ +
Sbjct: 97 IHSFQHKHIVKSVAFDRDSENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCR 156
Query: 153 STR-LVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD-RIL 210
+ ++SA D+T+RLW D + I+ + ++ + S+++S D IL
Sbjct: 157 GDKCIISAAEDKTVRLW----DRMTGIEVQRLQ----------FNSNPNSLEISSDNHIL 202
Query: 211 SASCDNTVSLWSTNYKEMTVIDPMED--LGGNVSTAAKKRRKLTLKDGSIRRRA------ 262
+ S +++S W E+ + +++ + NV++A+ K G +
Sbjct: 203 TISHGSSISFW-----EIDTLKKLKEVKVPTNVASASLHPDKHVFVCGGEDFKMYKFDYI 257
Query: 263 ---PLALFESHSAPVEAVIFDKSDDTVGYSVSQDHTIKTWDLITAK 305
+ F+ H PV +V F D + S S+D T++ W K
Sbjct: 258 TGNEIESFKGHFGPVHSVKF-SPDGELYASGSEDGTLRLWQTTVGK 302
>CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 925
Score = 50.1 bits (118), Expect = 7e-06
Identities = 44/163 (26%), Positives = 69/163 (41%), Gaps = 19/163 (11%)
Query: 60 DGELLRTSLQDYLIKKGLSSETFLNVEYTRAVLPPSYLSSFDNEDWVSSLDVGSNYIYSG 119
DG L+ T +D +K S +F V + + S W S I S
Sbjct: 371 DGSLMATGAEDGKVKIWNSRSSFCTVTFDE------HTSGVTAVKWTQS----GRAILSA 420
Query: 120 SYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTLRLWKTKNDDLKSID 179
S DG VR ++L K+Y R + T+L + D+ L ++ +I
Sbjct: 421 SLDGTVRAHDL-----KRYRN----FRTLVCPEPTQLATLAVDKAGDLVIAGAKEVFNIY 471
Query: 180 EEEIEDGKTLAILEGHKAPVVSIDVSKDRILSASCDNTVSLWS 222
E G L IL GH++ + SID+ + I+S S D T+ +W+
Sbjct: 472 IWSFETGHLLDILSGHESAISSIDIHGNHIVSGSWDRTIKMWT 514
>SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 775
Score = 49.7 bits (117), Expect = 9e-06
Identities = 40/146 (27%), Positives = 66/146 (44%), Gaps = 18/146 (12%)
Query: 84 NVEYTRAVLPPSYLSSF-DNEDWVSSLDVGSNYIYSGSYDGIVRTYNLS-GKVEKQYSGH 141
N ++T A P Y+ + + D V + + I S SYDG +R + S G GH
Sbjct: 557 NNDFTSATTNPFYIRTLRGHTDSVREVACLGDLIVSASYDGTLRVWKASTGVCLHVLRGH 616
Query: 142 SGPIRAVHYISSTR-LVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVV 200
G + +V S + +SAG D +R+W +E G+ L L GH V
Sbjct: 617 VGRVYSVTINPSRQQCISAGTDAKIRIWN-------------LESGELLQTLHGHSNLVS 663
Query: 201 SIDVSKDRILSASC--DNTVSLWSTN 224
+ +++ ++SAS D ++ +W N
Sbjct: 664 QVTFNQNILVSASAPPDTSLRVWDLN 689
>At3g42660 [R] KOG1274 WD40 repeat protein
Length = 951
Score = 49.7 bits (117), Expect = 9e-06
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 90 AVLPPSYLSSFDNEDWVSSLDVG--SNYIYSGSYDGIVRTYNL-SGKVEKQYSGHSGPIR 146
+ LPP+ L ++D V+SL + S + SGS D V+ Y SG+ + + + PIR
Sbjct: 51 STLPPTILRH--HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIR 108
Query: 147 AVHYISS-TRLVSAGNDRTLRLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVS 205
+ + S + L +AG+D ++L T DG + +L+GHK PV +D
Sbjct: 109 VLAFNGSGSLLAAAGDDEGIKLINTF-------------DGSIVRVLKGHKGPVTGLDFH 155
Query: 206 KDRILSASCDNT 217
+ L AS D T
Sbjct: 156 PNGELLASIDTT 167
>At3g18860 [I] KOG0301 Phospholipase A2-activating protein (contains WD40
repeats)
Length = 744
Score = 49.7 bits (117), Expect = 9e-06
Identities = 35/118 (29%), Positives = 57/118 (47%), Gaps = 17/118 (14%)
Query: 106 VSSLDVGSNYIYSGSYDGIVRTYNLSGKVEKQYSGHSGPIRAVHYISSTRLVSAGNDRTL 165
V+ + + + I S S D ++ + +G++ + + H PI+AV + S LVS +D +L
Sbjct: 100 VTGVAIDNEDIVSSSVDQTLKRWR-NGQLVESWDAHQSPIQAVIRLPSGELVSGSSDASL 158
Query: 166 RLWKTKNDDLKSIDEEEIEDGKTLAILEGHKAPVVSIDVSKD-RILSASCDNTVSLWS 222
+LWK K +L L GH V + V D LSAS D ++ LW+
Sbjct: 159 KLWKGKT---------------SLQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWA 201
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,959,711
Number of Sequences: 60738
Number of extensions: 1067724
Number of successful extensions: 7161
Number of sequences better than 1.0e-05: 115
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 6051
Number of HSP's gapped (non-prelim): 593
length of query: 444
length of database: 30,389,216
effective HSP length: 110
effective length of query: 334
effective length of database: 23,708,036
effective search space: 7918484024
effective search space used: 7918484024
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)