ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1843 check: MH S KOG0295 Function unknown WD40 repeat-containing protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1843 657379 656063 -439
(439 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR269w [S] KOG0295 WD40 repeat-containing protein 338 7e-93
7302979 [S] KOG0295 WD40 repeat-containing protein 154 2e-37
CE29339 [S] KOG0295 WD40 repeat-containing protein 136 7e-32
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 131 2e-30
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 79 1e-14
ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit 74 6e-13
CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit 73 1e-12
YPL151c [A] KOG0285 Pleiotropic regulator 1 72 1e-12
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 71 4e-12
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 70 5e-12
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 70 5e-12
CE11748 [R] KOG0266 WD40 repeat-containing protein 69 1e-11
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 69 1e-11
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 69 1e-11
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 69 2e-11
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 69 2e-11
7290331 [R] KOG0266 WD40 repeat-containing protein 66 9e-11
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 66 1e-10
YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 65 3e-10
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 64 3e-10
YMR116c [T] KOG0279 G protein beta subunit-like protein 64 4e-10
Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit 64 6e-10
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 64 6e-10
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 64 6e-10
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 64 6e-10
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 64 6e-10
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 64 6e-10
7302720 [R] KOG0266 WD40 repeat-containing protein 63 8e-10
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 63 1e-09
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 63 1e-09
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 63 1e-09
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 62 2e-09
7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit 62 2e-09
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 61 3e-09
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 61 3e-09
Hs4757988 [R] KOG0645 WD40 repeat protein 61 3e-09
At5g49430 [R] KOG0644 Uncharacterized conserved protein contains... 61 3e-09
CE00901 [R] KOG0266 WD40 repeat-containing protein 61 4e-09
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 61 4e-09
CE29136 [U] KOG0292 Vesicle coat complex COPI alpha subunit 60 5e-09
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 60 5e-09
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 60 6e-09
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 59 1e-08
Hs22052079 [R] KOG0266 WD40 repeat-containing protein 59 2e-08
CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit 58 2e-08
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 58 3e-08
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 58 3e-08
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 58 3e-08
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 57 4e-08
YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit 57 5e-08
SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 57 5e-08
At2g26060 [R] KOG0645 WD40 repeat protein 57 7e-08
At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit 57 7e-08
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 57 7e-08
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 56 9e-08
Hs13491164 [U] KOG1332 Vesicle coat complex COPII subunit SEC13 56 9e-08
At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit 56 9e-08
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 56 1e-07
YCR084c [R] KOG0266 WD40 repeat-containing protein 56 1e-07
At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit 56 1e-07
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 55 2e-07
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 55 2e-07
Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 55 2e-07
At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains D... 55 2e-07
7303130 [R] KOG0645 WD40 repeat protein 55 2e-07
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 55 2e-07
At3g49660 [R] KOG0266 WD40 repeat-containing protein 55 2e-07
YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 55 3e-07
CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein 55 3e-07
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 55 3e-07
At2g47410 [R] KOG0644 Uncharacterized conserved protein contains... 55 3e-07
7292122 [U] KOG0292 Vesicle coat complex COPI alpha subunit 55 3e-07
SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit 54 4e-07
SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (c... 54 4e-07
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 54 5e-07
At4g02730 [R] KOG0266 WD40 repeat-containing protein 54 5e-07
7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 54 5e-07
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 54 5e-07
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 54 6e-07
CE06574 [R] KOG0266 WD40 repeat-containing protein 54 6e-07
CE05533 [A] KOG0285 Pleiotropic regulator 1 54 6e-07
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 54 6e-07
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 54 6e-07
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 54 6e-07
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 53 8e-07
ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 53 8e-07
HsM6005894_2 [R] KOG4155 FOG: WD40 repeat 53 8e-07
Hs21536371_2 [R] KOG4155 FOG: WD40 repeat 53 8e-07
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 52 1e-06
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 52 1e-06
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 52 1e-06
Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein 52 2e-06
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 52 2e-06
Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 52 2e-06
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 52 2e-06
Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 52 2e-06
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 51 3e-06
ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID sub... 51 3e-06
7299285 [R] KOG4155 FOG: WD40 repeat 51 3e-06
7292737 [A] KOG0285 Pleiotropic regulator 1 51 3e-06
YLR208w [U] KOG1332 Vesicle coat complex COPII subunit SEC13 51 4e-06
YJL112w [R] KOG4155 FOG: WD40 repeat 51 4e-06
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 51 4e-06
At3g18860 [I] KOG0301 Phospholipase A2-activating protein (conta... 51 4e-06
At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit 51 4e-06
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 50 5e-06
Hs13376840 [R] KOG4155 FOG: WD40 repeat 50 5e-06
CE06090 [T] KOG0279 G protein beta subunit-like protein 50 5e-06
7297305 [T] KOG0279 G protein beta subunit-like protein 50 5e-06
Hs7108333_2 [R] KOG4155 FOG: WD40 repeat 50 5e-06
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 50 5e-06
At1g48630 [T] KOG0279 G protein beta subunit-like protein 50 7e-06
YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit 50 9e-06
YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 9e-06
CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 50 9e-06
At3g18140 [R] KOG0315 G-protein beta subunit-like protein (conta... 50 9e-06
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 50 9e-06
>YOR269w [S] KOG0295 WD40 repeat-containing protein
Length = 494
Score = 338 bits (868), Expect = 7e-93
Identities = 175/449 (38%), Positives = 270/449 (59%), Gaps = 44/449 (9%)
Query: 16 DYVRQNEGSDELLVQLESVLLPNGSDVIPQDPNLLERKWNSIVRLQSKIMELEKNCEELQ 75
+++ N+ S+E +V ++ +LLP +KWNSIVRLQ KI+ELE+N E L
Sbjct: 65 EFISNNDTSNESMVDIDELLLP--------------KKWNSIVRLQKKIIELEQNTETLV 110
Query: 76 KSIDEQQSSTNQI-------SNASS-----DWCPRDTPSFQITLDASITALCLHPSLPII 123
I + + +++ SN +S W PR+ PS I +++S+T++ LHP+LPI+
Sbjct: 111 SQIKDLNTQVSELAQFKPTTSNGTSAHNVLKWIPRNLPSCLINVESSVTSVKLHPNLPIV 170
Query: 124 FIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPN--ENGRPAYLA--TTSKDLN 179
F+ D GKL +D+ N +PL S +H ITS+ + N + + YL T SKDL
Sbjct: 171 FVATDHGKLYAFDLFNYTIPLASLQSHTKAITSMDVLFTNYTNSSKKNYLVIVTASKDLQ 230
Query: 180 TKIWE-LELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCI 238
+++ + + I++L GHEH VS + +++ D+ +A+CSRD +KIWD NGW +
Sbjct: 231 IHVFKWVSEECKFQQIRSLLGHEHIVSAVKIWQKNNDVHIASCSRDQTVKIWDFHNGWSL 290
Query: 239 KSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLIL--IP 296
K+FQPH+QW+RS+ V G+++++GS+D+ +RLTHWPSGNGLS+G GH+FP+EKV + I
Sbjct: 291 KTFQPHSQWVRSIDVLGDYIISGSHDTTLRLTHWPSGNGLSVGTGHEFPIEKVKFIHFIE 350
Query: 297 DPQHLQ------PQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVI 350
D ++ +Y+ G Q+ SASRD TI++W++ LP + HR P PNP D+ F+ +
Sbjct: 351 DSPEIRFRTPSTDRYKNWGMQYCVSASRDRTIKIWEIPLPTLMAHRAPIPNPTDSNFRCV 410
Query: 351 AVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSLDWTNLSTTTCKKSWDLSNKGFQNCLT 410
L H SWVRD+ LFSC+DD SV+CW +L+T C W+ + GF NCL
Sbjct: 411 LTLKGHLSWVRDISIRGQYLFSCADDKSVRCW-----DLNTGQCLHVWEKLHTGFVNCLD 465
Query: 411 LDNIAFTGLPSRKLLFSGSSEGTLTSFMR 439
LD + + R+++ +G + FMR
Sbjct: 466 LDVDFDSNVTPRQMMVTGGLDCKSNVFMR 494
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 154 bits (390), Expect = 2e-37
Identities = 116/396 (29%), Positives = 184/396 (46%), Gaps = 43/396 (10%)
Query: 1 MLTYKQRQSLNHAICDYVRQNEGSDELLVQLESVLLPNGSDVIPQDPNLLERKWNSIVRL 60
+L+ +QR+ LN AI DY+ N +D L + L ++V + LLE+KW S++RL
Sbjct: 4 VLSQRQREELNQAIADYLGSNGYADSLETFRKEADL--STEVEKKFGGLLEKKWTSVIRL 61
Query: 61 QSKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPRDTPSFQITLD-ASITALCLHPS 119
Q K+MELE E +K + E + N+ +W PR F +T ASIT + HP
Sbjct: 62 QKKVMELEAKLTEAEKEVIEGAPTKNK--RTPGEWIPRPPEKFSLTGHRASITRVIFHPI 119
Query: 120 LPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLN 179
++ + + +D E +S H D + ++ + LA+ S DL+
Sbjct: 120 FALMVSASEDATIRIWDFETGEYE-RSLKGHTDSVQDVAFDAQGK-----LLASCSADLS 173
Query: 180 TKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIK 239
K+W+ + + IKT+ GH+H VS F G +L A SRD +K+W+++ G+C+K
Sbjct: 174 IKLWDFQ--QSYECIKTMHGHDHNVSSVAFVPAGDYVLSA--SRDRTIKMWEVATGYCVK 229
Query: 240 SFQPHTQWIRSLHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKV------ 291
++ H +W+R + VH G T SND IR+ S + H+ VE +
Sbjct: 230 TYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEA 289
Query: 292 -LILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVI 350
I + + +AS SRD TIR+W VS+ +
Sbjct: 290 AASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVG-----------------LCL 332
Query: 351 AVLTDHNSWVRDL--RQFNDMLFSCSDDGSVKCWSL 384
L+ H++WVR L L S SDD +++ W L
Sbjct: 333 LTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Score = 51.6 bits (122), Expect = 2e-06
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
+LA+ S+D +IW++ + L TL+GH++ V F G L+ A S D +++
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLL---TLSGHDNWVRGLAFHPGGKYLVSA--SDDKTIRV 365
Query: 230 WDISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAIRL 269
WD+ N C+K+ H + S+ H +V++GS D +++
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 136 bits (342), Expect = 7e-32
Identities = 109/391 (27%), Positives = 185/391 (46%), Gaps = 40/391 (10%)
Query: 2 LTYKQRQSLNHAICDYVRQNEGSDELLVQLESVLLPNGSDVIPQDPNLLERKWNSIVRLQ 61
L+ +Q++ +N AI +Y++ N S+ V L+ L +D+ P +LE+KW +++RLQ
Sbjct: 3 LSERQKEEINRAIAEYMQNNGYSESFSVFLKESSLSE-NDIKPLG-GILEKKWTTVLRLQ 60
Query: 62 SKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPRDTPSFQITLDA-SITALCLHPSL 120
K+ +LE +E Q+ I+ + ++ ++DW PR + ++T IT + HP
Sbjct: 61 RKVNDLESKLQESQREINHGAPTRDK--RQAADWIPRPPETQKLTGHRLPITRVIFHPLW 118
Query: 121 PIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNT 180
I+ + + +D +L ++ H D + I+I + L + S DL+
Sbjct: 119 TIMASCSEDATIKVWDYETGQLE-RTLKGHTDAVNDIAIDAAGKQ-----LVSCSSDLSI 172
Query: 181 KIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKS 240
K+W+ T +K+L GHEHTVS F G +L A SRD +K WDIS G+C+ +
Sbjct: 173 KLWDF--GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSA--SRDHTIKQWDISTGYCVYT 228
Query: 241 FQPHTQWIRSLHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDP 298
F+ H W+R + + G + S D + + + + + + H+ VE V PD
Sbjct: 229 FRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECV-EWAPDT 287
Query: 299 QHLQ-PQYQPLG-FQHVA-SASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTD 355
+ QP G H+ S SRD +I+ W ++ T V+ L
Sbjct: 288 AYTNVTGQQPEGNSTHILFSGSRDRSIKAWNIN-----------------TGDVLFTLLA 330
Query: 356 HNSWVRDL--RQFNDMLFSCSDDGSVKCWSL 384
H +WVR L L S +DD +++ W L
Sbjct: 331 HENWVRGLAFHPKGKYLISVADDKTLRVWEL 361
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 131 bits (330), Expect = 2e-30
Identities = 99/396 (25%), Positives = 178/396 (44%), Gaps = 46/396 (11%)
Query: 1 MLTYKQRQSLNHAICDYVRQNEGSDELLVQLESVLLPNGSDVIPQDPNLLERKWNSIVRL 60
+L+ +QR LN AI DY+R N + V + L ++ + LLE+KW S++RL
Sbjct: 2 VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIRL 61
Query: 61 QSKIMELEKNCEELQKSIDEQQSSTNQISNA--SSDWCPRDTPSFQITLDAS-ITALCLH 117
Q K+MELE E + E+ +S + +W PR + ++ S +T + H
Sbjct: 62 QKKVMELESKLNEAK----EEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFH 117
Query: 118 PSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKD 177
P ++ + + +D + ++ H D + IS + +G+ LA+ S D
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISF---DHSGK--LLASCSAD 171
Query: 178 LNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWC 237
+ K+W+ + I+T+ GH+H VS G ++ A SRD +K+W++ G+C
Sbjct: 172 MTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNGDHIVSA--SRDKTIKMWEVQTGYC 226
Query: 238 IKSFQPHTQWIRSLHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKV---- 291
+K+F H +W+R + + G + + SND +R+ + + H+ VE +
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 292 ---LILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFK 348
I + + + + S SRD TI++W VS T
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS-----------------TGM 329
Query: 349 VIAVLTDHNSWVRDL--RQFNDMLFSCSDDGSVKCW 382
+ L H++WVR + + SC+DD +++ W
Sbjct: 330 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 50.4 bits (119), Expect = 5e-06
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 38/185 (20%)
Query: 162 PNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGA------- 214
PN++G +A+ S D ++W + + ++ HEH V + +
Sbjct: 242 PNQDG--TLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEA 296
Query: 215 -----------DLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL--HVHGEFVLTG 261
L + SRD +K+WD+S G C+ + H W+R + H G+F+L+
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 356
Query: 262 SNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGT 321
++D +R+ + + + H+ V + D P +V + S D T
Sbjct: 357 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSL-----DFHKTAP--------YVVTGSVDQT 403
Query: 322 IRLWK 326
+++W+
Sbjct: 404 VKVWE 408
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 79.0 bits (193), Expect = 1e-14
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 41/244 (16%)
Query: 143 PLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSH-IKTLAGHE 201
PL+ H D + + +S EN Y+ ++S+D ++W L+ S + L GH
Sbjct: 295 PLKVYFGHTDNVLGVVVS---EN----YIISSSRDHTARVWRLDATSPAEACMHVLRGHL 347
Query: 202 HTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTG 261
+V+ Q+ + L+ T S D L+ WDI+ G CI+ H + I +G+F+++G
Sbjct: 348 ASVNSVQYSSKTG--LIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSG 405
Query: 262 SNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGT 321
S+D IR+ SG L M GH+ + V + + S DGT
Sbjct: 406 SSDLTIRIFEASSGKLLRMLQGHEDLIRTV---------------RFNDEKIVSGGYDGT 450
Query: 322 IRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKC 381
+R+W +T + + NS V L+ + + +C+ +
Sbjct: 451 VRIWN----------------FNTGEQHCVLHNSRNSRVFGLQFDHRRIIACTHSSEILV 494
Query: 382 WSLD 385
W+ D
Sbjct: 495 WNFD 498
>ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 759
Score = 73.6 bits (179), Expect = 6e-13
Identities = 57/204 (27%), Positives = 96/204 (46%), Gaps = 23/204 (11%)
Query: 123 IFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKI 182
+ +G D G + Y+ L +++ AH D I I S P + P++L T S D K+
Sbjct: 108 LLVGSDDGNVSIYE-LGKYRKVKTFHAHDDFIRKIE-SHPQD---PSFL-TASDDATLKM 161
Query: 183 WELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQ 242
W + +S T GHEH V D F+ A ++ CS D +K+W + C+K+F+
Sbjct: 162 WIYQ--GEVSQAMTYTGHEHFVMDVCFYPNDASKFVS-CSLDSTVKVWSVEQPHCVKTFK 218
Query: 243 PHTQWIRSLHVHG-EFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHL 301
HT I S+ G + +++G++D +++ + + ++ GH + KV
Sbjct: 219 GHTSGINSICFLGRDCLVSGADDLTLKVWDFQTAQCITTLSGHTNNINKV---------- 268
Query: 302 QPQYQPLGFQHVASASRDGTIRLW 325
Y F AS DG++RLW
Sbjct: 269 ---YPLNSFSLFASCGEDGSMRLW 289
>CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 1000
Score = 72.8 bits (177), Expect = 1e-12
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
+ +L +HP+LP + D + +D N QS H + I+I+ P +N
Sbjct: 102 LRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAIN-PKDNNT--- 157
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
AT S D K+W+ S + + TL GHE V+ ++ G + + + D +KIW
Sbjct: 158 FATASLDKTVKVWQF--GSNVPNF-TLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIW 214
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTH 271
D N C+++ H Q + S+ H E ++TGS DS +RL H
Sbjct: 215 DYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWH 257
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 72.4 bits (176), Expect = 1e-12
Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 55/291 (18%)
Query: 150 HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQF 209
H+ + ++I P +N + T S D K+W+L + TLAGH TV D
Sbjct: 138 HLGWVRCVAID-PVDN---EWFITGSNDTTMKVWDLATGKLKT---TLAGHVMTVRDVAV 190
Query: 210 FERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHG--EFVLTGSNDSAI 267
+R L + S D +K WD+ I+ + H +R++ +H + + T DS I
Sbjct: 191 SDRHPYLF--SVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVI 248
Query: 268 RLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKV 327
+L + + +GH P+ +V DPQ V S+S D T+RLW V
Sbjct: 249 KLWDMRTRIPVITLVGHKGPINQVQCTPVDPQ-------------VVSSSTDATVRLWDV 295
Query: 328 SLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDL----RQFNDMLFSCSDDGSVKCWS 383
K + VLT H VR ++F+ + +C+DD ++ W
Sbjct: 296 -----------------VAGKTMKVLTHHKRSVRATALHPKEFS-VASACTDD--IRSWG 335
Query: 384 LDWTNLSTTTCKKSWDLSNKGFQNCLTL--DNIAFTGLPSRKLLFSGSSEG 432
L +L T +++ G N L++ D++ F G + L F G
Sbjct: 336 LAEGSLLT-----NFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSG 381
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 70.9 bits (172), Expect = 4e-12
Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 58/265 (21%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+ + S D K+W L +TL GH V Q + ++ + S D LK+W
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCL---RTLVGHTGGVWSSQM----SGNIIISGSTDRTLKVW 1060
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
D+ +G C+ + Q HT +R +H+HG V++GS D+ +R+ G+ L + +GH V
Sbjct: 1061 DMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRC 1120
Query: 291 V--------------LILIPDPQHLQPQYQPLGFQ-----------HVASASRDGTIRLW 325
V ++ I P+ + + G HV S S D +IR+W
Sbjct: 1121 VQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVW 1180
Query: 326 KVSLPK----FIPHR------PPRPNPL-----DTTFKVIAVLT-----------DHNSW 359
V + H+ R N L D+T KV + T H+S
Sbjct: 1181 DVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSA 1240
Query: 360 VRDLRQFNDMLFSCSDDGSVKCWSL 384
V L+ + + + SDDG+VK W +
Sbjct: 1241 VTCLQFNSRFVVTSSDDGTVKLWDV 1265
Score = 55.1 bits (131), Expect = 2e-07
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 175 SKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISN 234
S+D ++W++E S L H+ L GH V Q+ + L+ + + D +KIW
Sbjct: 1092 SRDATLRVWDIEQGSCL-HV--LVGHLAAVRCVQYDGK----LIVSGAYDYMVKIWHPER 1144
Query: 235 GWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGH---------- 284
C+ + Q HT + SL G V++GS D++IR+ +GN +GH
Sbjct: 1145 QECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR 1204
Query: 285 ----------------DFPVEKVLILIPDPQHLQPQYQPLGF--QHVASASRDGTIRLWK 326
D + L + P L F + V ++S DGT++LW
Sbjct: 1205 QNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWD 1264
Query: 327 VSLPKFI 333
V FI
Sbjct: 1265 VKTGDFI 1271
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 70.5 bits (171), Expect = 5e-12
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 51/240 (21%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+ + S D K+W L +TL GH V Q D ++ + S D LK+W
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQM----RDNIIISGSTDRTLKVW 446
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
+ G CI + HT +R +H+H + V++GS D+ +R+ +G L + +GH V
Sbjct: 447 NAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 506
Query: 291 V--------------LILIPDPQ----------HLQPQYQPLGFQ--HVASASRDGTIRL 324
V ++ + DP+ H Y L F HV S S D +IR+
Sbjct: 507 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQFDGIHVVSGSLDTSIRV 565
Query: 325 WKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
W V T I LT H S + +++L S + D +VK W +
Sbjct: 566 WDVE-----------------TGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 608
Score = 54.7 bits (130), Expect = 3e-07
Identities = 51/224 (22%), Positives = 92/224 (40%), Gaps = 31/224 (13%)
Query: 112 TALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYL 171
T C+H + G L +DI + L M H+ + + +GR +
Sbjct: 463 TVRCMHLHEKRVVSGSRDATLRVWDIETGQC-LHVLMGHVAAVRCVQY-----DGRR--V 514
Query: 172 ATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWD 231
+ + D K+W+ E ++ L TL GH + V QF + + + S D +++WD
Sbjct: 515 VSGAYDFMVKVWDPETETCLH---TLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWD 567
Query: 232 ISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKV 291
+ G CI + H + + +++G+ DS +++ W D +
Sbjct: 568 VETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI--W------------DIKTGQC 613
Query: 292 LILIPDPQHLQPQYQPLGF--QHVASASRDGTIRLWKVSLPKFI 333
L + P Q L F V ++S DGT++LW + +FI
Sbjct: 614 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 657
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 70.5 bits (171), Expect = 5e-12
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 51/240 (21%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+ + S D K+W L +TL GH V Q D ++ + S D LK+W
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCL---RTLVGHTGGVWSSQM----RDNIIISGSTDRTLKVW 366
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
+ G CI + HT +R +H+H + V++GS D+ +R+ +G L + +GH V
Sbjct: 367 NAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 426
Query: 291 V--------------LILIPDPQ----------HLQPQYQPLGFQ--HVASASRDGTIRL 324
V ++ + DP+ H Y L F HV S S D +IR+
Sbjct: 427 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQFDGIHVVSGSLDTSIRV 485
Query: 325 WKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
W V T I LT H S + +++L S + D +VK W +
Sbjct: 486 WDVE-----------------TGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 528
Score = 54.7 bits (130), Expect = 3e-07
Identities = 51/224 (22%), Positives = 92/224 (40%), Gaps = 31/224 (13%)
Query: 112 TALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYL 171
T C+H + G L +DI + L M H+ + + +GR +
Sbjct: 383 TVRCMHLHEKRVVSGSRDATLRVWDIETGQC-LHVLMGHVAAVRCVQY-----DGRR--V 434
Query: 172 ATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWD 231
+ + D K+W+ E ++ L TL GH + V QF + + + S D +++WD
Sbjct: 435 VSGAYDFMVKVWDPETETCLH---TLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWD 487
Query: 232 ISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKV 291
+ G CI + H + + +++G+ DS +++ W D +
Sbjct: 488 VETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI--W------------DIKTGQC 533
Query: 292 LILIPDPQHLQPQYQPLGF--QHVASASRDGTIRLWKVSLPKFI 333
L + P Q L F V ++S DGT++LW + +FI
Sbjct: 534 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 577
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 69.3 bits (168), Expect = 1e-11
Identities = 51/179 (28%), Positives = 85/179 (46%), Gaps = 26/179 (14%)
Query: 149 AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQ 208
AH I+ I S +GR Y+ + S D + KIW ++ + KTL GH +++
Sbjct: 105 AHKKSISGIKFS---PDGR--YMGSGSADCSIKIWRMDF----VYEKTLMGHRLGINE-- 153
Query: 209 FFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWI--RSLHVHGEFVLTGSNDSA 266
F L+ +CS D +K++D+S+G C+K+ + HT ++ + G + +GS D
Sbjct: 154 FSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDET 213
Query: 267 IRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
IR+ +GN + GH+ PV V ++AS S DG +R+W
Sbjct: 214 IRIWCARNGNTIFSIPGHEDPVSSVCF-------------NRDGAYLASGSYDGIVRIW 259
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 68.9 bits (167), Expect = 1e-11
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
LA+ S D ++W L +T + L GH V+ QF + L + S D ++IW
Sbjct: 286 LASGSYDATIRLWNL---ATFQQVALLEGHSSGVTCLQFDQ----CKLISGSMDKTIRIW 338
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
+ CI HT + L +++GS D ++L H+ G +++ GH PV
Sbjct: 339 NYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLR-GHTGPVNS 397
Query: 291 VLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVI 350
V I+ + G V S S D TI++W + T +
Sbjct: 398 VRII-----------RDRGL--VLSGSDDSTIKIWSLE-----------------TNTCL 427
Query: 351 AVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSLD 385
+ H V+ L + LFSCS DG++K W ++
Sbjct: 428 HTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIE 462
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 68.9 bits (167), Expect = 1e-11
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 123 IFIGLDSGKLL-------RYDILNVELP--LQSTMAHMDGITSISISLPNENGRPAYLAT 173
+ +G SG+LL R ++ ++ P + S H + S+ ++ P E +
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE-----LIVA 80
Query: 174 TSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDIS 233
S+ + ++W+LE L +TL G + + F G +A+ S+D +K+WDI
Sbjct: 81 GSQSGSIRVWDLEAAKIL---RTLMGLKANICSLDFHPYGE--FVASGSQDTNIKLWDIR 135
Query: 234 NGWCIKSFQPHTQWIRSLHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKV 291
C+ ++ H+Q +R L G+++ + ++D ++L +G +S GH PV V
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 292 LILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPL 343
++ P + +AS S DGTIR W + + + P P+
Sbjct: 196 ------------EFHPNEYL-LASGSSDGTIRFWDLEKFQVVSRIEGEPGPV 234
Score = 56.6 bits (135), Expect = 7e-08
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 39/244 (15%)
Query: 144 LQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHT 203
LQ +AH ++S+ + +GR LAT D +W + + I +L GH
Sbjct: 13 LQEIVAHASNVSSLVLG--KASGR--LLATGGDDCRVNLWSINKPNC---IMSLTGHTSP 65
Query: 204 VSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL--HVHGEFVLTG 261
V + + L+ S+ +++WD+ +++ I SL H +GEFV +G
Sbjct: 66 VESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHPYGEFVASG 123
Query: 262 SNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGT 321
S D+ I+L + GH V + L PD + L ASA+ D T
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAV-RCLRFSPDGKWL------------ASAADDHT 170
Query: 322 IRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKC 381
++LW ++ K + P P++ V + +L S S DG+++
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVN---------------VVEFHPNEYLLASGSSDGTIRF 215
Query: 382 WSLD 385
W L+
Sbjct: 216 WDLE 219
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 68.6 bits (166), Expect = 2e-11
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 55/305 (18%)
Query: 108 DASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGR 167
D IT + +H ++ G D L + I E+ + + + H G+ + IS + GR
Sbjct: 254 DHVITCMQIHDD--VLVTGSDDNTLKVWCIDKGEV-MYTLVGHTGGVWTSQIS---QCGR 307
Query: 168 PAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYL 227
Y+ + S D K+W +D +L H TL GH TV C A +L T SRD L
Sbjct: 308 --YIVSGSTDRTVKVWST-VDGSLLH--TLQGHTSTVR-CMAM---AGSILVTGSRDTTL 358
Query: 228 KIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFP 287
++WD+ +G + + H +R + G V++G D +++ + +G + GH+
Sbjct: 359 RVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHN-- 416
Query: 288 VEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPK-------------FIP 334
+V L+ + + V S S D +IR+W + P+
Sbjct: 417 -NRVYSLLFESER----------SIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 465
Query: 335 HRPPRPNPL-----DTTFKV--------IAVLTDHNSWVRDLRQFN-DMLFSCSDDGSVK 380
R N L D+ +V + +L+ H S + L+ F +M+ + SDDG+VK
Sbjct: 466 GMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVK 525
Query: 381 CWSLD 385
W ++
Sbjct: 526 LWDIE 530
Score = 59.3 bits (142), Expect = 1e-08
Identities = 55/242 (22%), Positives = 92/242 (37%), Gaps = 48/242 (19%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
L T S D K+W ++ + TL GH V Q + G + + S D +K+W
Sbjct: 267 LVTGSDDNTLKVWCIDKGEVMY---TLVGHTGGVWTSQISQCGR--YIVSGSTDRTVKVW 321
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
+G + + Q HT +R + + G ++TGS D+ +R+ SG L+ GH
Sbjct: 322 STVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGH------ 375
Query: 291 VLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPN--------- 341
H + V S D T+++W + I N
Sbjct: 376 ---------HAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES 426
Query: 342 --------PLDTTFKV-----------IAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
LDT+ +V +A+L H S ++ ++L SC+ D V+ W
Sbjct: 427 ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVW 486
Query: 383 SL 384
+
Sbjct: 487 DI 488
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 68.6 bits (166), Expect = 2e-11
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 55/305 (18%)
Query: 108 DASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGR 167
D IT + +H ++ G D L + I E+ + + + H G+ + IS + GR
Sbjct: 256 DHVITCMQIHDD--VLVTGSDDNTLKVWCIDKGEV-MYTLVGHTGGVWTSQIS---QCGR 309
Query: 168 PAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYL 227
Y+ + S D K+W +D +L H TL GH TV C A +L T SRD L
Sbjct: 310 --YIVSGSTDRTVKVWST-VDGSLLH--TLQGHTSTVR-CMAM---AGSILVTGSRDTTL 360
Query: 228 KIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFP 287
++WD+ +G + + H +R + G V++G D +++ + +G + GH+
Sbjct: 361 RVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHN-- 418
Query: 288 VEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPK-------------FIP 334
+V L+ + + V S S D +IR+W + P+
Sbjct: 419 -NRVYSLLFESER----------SIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 335 HRPPRPNPL-----DTTFKV--------IAVLTDHNSWVRDLRQFN-DMLFSCSDDGSVK 380
R N L D+ +V + +L+ H S + L+ F +M+ + SDDG+VK
Sbjct: 468 GMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVK 527
Query: 381 CWSLD 385
W ++
Sbjct: 528 LWDIE 532
Score = 59.3 bits (142), Expect = 1e-08
Identities = 55/242 (22%), Positives = 92/242 (37%), Gaps = 48/242 (19%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
L T S D K+W ++ + TL GH V Q + G + + S D +K+W
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMY---TLVGHTGGVWTSQISQCGR--YIVSGSTDRTVKVW 323
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
+G + + Q HT +R + + G ++TGS D+ +R+ SG L+ GH
Sbjct: 324 STVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGH------ 377
Query: 291 VLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPN--------- 341
H + V S D T+++W + I N
Sbjct: 378 ---------HAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES 428
Query: 342 --------PLDTTFKV-----------IAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
LDT+ +V +A+L H S ++ ++L SC+ D V+ W
Sbjct: 429 ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVW 488
Query: 383 SL 384
+
Sbjct: 489 DI 490
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 66.2 bits (160), Expect = 9e-11
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
L + S D K+WEL ST +KTL GH + V C F + L+ + S D ++IW
Sbjct: 129 LVSGSDDKTLKVWEL---STGKSLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIW 183
Query: 231 DISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPV 288
D+ G C+K+ H+ + ++H + G +++ S D R+ W + +G +
Sbjct: 184 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCL-------- 233
Query: 289 EKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFK 348
K LI +P ++ P G +++ +A+ D T++LW S K + N F
Sbjct: 234 -KTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 291
Query: 349 VIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
+V W+ S S+D V W+L
Sbjct: 292 NFSV--TGGKWI----------VSGSEDNMVYIWNL 315
Score = 52.0 bits (123), Expect = 2e-06
Identities = 48/185 (25%), Positives = 84/185 (44%), Gaps = 26/185 (14%)
Query: 144 LQSTMA-HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEH 202
L+ T+A H ++++ S E +LA++S D KIW D KT++GH+
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGE-----WLASSSADKLIKIWGA-YDGKFE--KTISGHKL 115
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWI--RSLHVHGEFVLT 260
+SD + LL + S D LK+W++S G +K+ + H+ ++ + + +++
Sbjct: 116 GISDVAWSSDSR--LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVS 173
Query: 261 GSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDG 320
GS D ++R+ +G L H PV V H + S+S DG
Sbjct: 174 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAV--------HFNRD-----GSLIVSSSYDG 220
Query: 321 TIRLW 325
R+W
Sbjct: 221 LCRIW 225
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 65.9 bits (159), Expect = 1e-10
Identities = 49/189 (25%), Positives = 84/189 (43%), Gaps = 25/189 (13%)
Query: 145 QSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTV 204
++ + H + S S S N+ YL + S+D ++W ++ + L K GH H V
Sbjct: 519 KTLVGHSGTVYSTSFSPDNK-----YLLSGSEDKTVRLWSMDTHTALVSYK---GHNHPV 570
Query: 205 SDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIR--SLHVHGEFVLTGS 262
D F G AT S D ++W + + ++ F H + S H +G +V TGS
Sbjct: 571 WDVSFSPLGH--YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGS 628
Query: 263 NDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTI 322
+D R+ +G+ + + +GH PV + + PD + L ++ S DG I
Sbjct: 629 SDKTCRMWDVSTGDSVRLFLGHTAPVISIAV-CPDGRWL------------STGSEDGII 675
Query: 323 RLWKVSLPK 331
+W + K
Sbjct: 676 NVWDIGTGK 684
>YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 817
Score = 64.7 bits (156), Expect = 3e-10
Identities = 41/128 (32%), Positives = 64/128 (49%), Gaps = 13/128 (10%)
Query: 144 LQSTMA-HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEH 202
L++T+A H G+ +S ++ LAT+S D KIW L+ T S +KTL GH +
Sbjct: 525 LEATLANHKRGLWDVSFCQYDK-----LLATSSGDKTVKIWSLD---TFSVMKTLEGHTN 576
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQ--WIRSLHVHGEFVLT 260
V C F + L+ +C D +KIWD S+G C+K+ H W S G+ +++
Sbjct: 577 AVQRCSFINKQKQLI--SCGADGLIKIWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVS 634
Query: 261 GSNDSAIR 268
D +
Sbjct: 635 ADADGVFQ 642
Score = 53.9 bits (128), Expect = 5e-07
Identities = 50/244 (20%), Positives = 86/244 (34%), Gaps = 39/244 (15%)
Query: 148 MAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWEL-----ELDSTLSHIKTLAGHEH 202
+ H +T++ + G P +L T S DL K W + +D + + H H
Sbjct: 431 IGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAH 490
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQ--WIRSLHVHGEFVLT 260
D + AT S D KIW++ NG + H + W S + + + T
Sbjct: 491 EKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLAT 550
Query: 261 GSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDG 320
S D +++ + + + GH V++ + Q + S DG
Sbjct: 551 SSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQ-------------LISCGADG 597
Query: 321 TIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNS--WVRDLRQFNDMLFSCSDDGS 378
I++W S + + + L HN+ W DM+ S DG
Sbjct: 598 LIKIWDCS-----------------SGECLKTLDGHNNRLWALSTMNDGDMIVSADADGV 640
Query: 379 VKCW 382
+ W
Sbjct: 641 FQFW 644
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 64.3 bits (155), Expect = 3e-10
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 47/246 (19%)
Query: 144 LQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHT 203
LQ+ H+D + ++ + +G+ YL TTS D ++W++ +T + + GH +
Sbjct: 332 LQTFEGHLDRLARVAF---HPSGK--YLGTTSYDKTWRLWDI---NTGAELLLQEGHSRS 383
Query: 204 VSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTG 261
V F + GA L A+C D ++WD+ G I FQ H + + S++ +G + +G
Sbjct: 384 VYGIAFQQDGA--LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASG 441
Query: 262 SNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHL--QPQYQPLGFQHVASASRD 319
D+ R+ W D + K L +IP +L Q +Y+P +A+AS D
Sbjct: 442 GEDNQCRI--W------------DLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYD 487
Query: 320 GTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVR--DLRQFNDMLFSCSDDG 377
+ +W F ++ L H S V D+ + + + S D
Sbjct: 488 MKVNIWS-----------------GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDR 530
Query: 378 SVKCWS 383
++K W+
Sbjct: 531 TIKLWT 536
>YMR116c [T] KOG0279 G protein beta subunit-like protein
Length = 319
Score = 63.9 bits (154), Expect = 4e-10
Identities = 63/254 (24%), Positives = 108/254 (41%), Gaps = 40/254 (15%)
Query: 139 NVELPLQSTM-AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHI--K 195
N L L+ T+ H +TS++ S G+P L + S+D W+L D + +
Sbjct: 4 NEVLVLRGTLEGHNGWVTSLATSA----GQPNLLLSASRDKTLISWKLTGDDQKFGVPVR 59
Query: 196 TLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV-- 253
+ GH H V DC GA L A S D L++WD++ G + F H + S+ +
Sbjct: 60 SFKGHSHIVQDCTLTADGAYALSA--SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 254 HGEFVLTGSNDSAIRLTHWP-SGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQH 312
+++GS D I++ W G L+ +GH+ V +V + +P+ +
Sbjct: 118 KASMIISGSRDKTIKV--WTIKGQCLATLLGHNDWVSQVRV-VPNEKADDDSVT------ 168
Query: 313 VASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFND--ML 370
+ SA D ++ W ++ F++ A HNS + L D ++
Sbjct: 169 IISAGNDKMVKAWNLN-----------------QFQIEADFIGHNSNINTLTASPDGTLI 211
Query: 371 FSCSDDGSVKCWSL 384
S DG + W+L
Sbjct: 212 ASAGKDGEIMLWNL 225
>Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 906
Score = 63.5 bits (153), Expect = 6e-10
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
I + +HP+ P I D + +D Q H + I I+ P +N +
Sbjct: 102 IRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVIN-PKDNNQ--- 157
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
A+ S D K+W+L + S TL GHE V+ ++ G L + + D +KIW
Sbjct: 158 FASASLDRTIKVWQL---GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTH 271
D N C+++ + H Q + H E ++TGS D +R+ H
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 63.5 bits (153), Expect = 6e-10
Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 42/344 (12%)
Query: 43 IPQDPNLLERKW----NSIVRLQSKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPR 98
I QD +E W +S+ R+ + E K LQ D+Q+ + N W
Sbjct: 239 IIQDIETIESNWRCGRHSLQRIHCR-SETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKN 295
Query: 99 DTPSFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSIS 158
+I + + LCL +I G + +D+ E+ L + + H + + +
Sbjct: 296 TLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM-LNTLIHHCEAVLHLR 354
Query: 159 ISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLL 218
+ NG + T SKD + +W++ + ++ + L GH V+ F D +
Sbjct: 355 FN----NGM---MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF----DDKYI 403
Query: 219 ATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGL 278
+ S D +K+W+ S +++ H + I L V++GS+D+ IRL G L
Sbjct: 404 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 463
Query: 279 SMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPP 338
+ GH+ V + + + S + DG I++W + + P
Sbjct: 464 RVLEGHEELVRCI---------------RFDNKRIVSGAYDGKIKVWDL-----VAALDP 503
Query: 339 RPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
R P T + L +H+ V L+ + S S D ++ W
Sbjct: 504 RA-PAGTL--CLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 544
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 63.5 bits (153), Expect = 6e-10
Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 42/344 (12%)
Query: 43 IPQDPNLLERKW----NSIVRLQSKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPR 98
I QD +E W +++ R+Q + E K LQ D+++ + N+ W
Sbjct: 178 IIQDIETIESNWRCGRHNLQRIQCR-SENSKGVYCLQ--YDDEKIISGLRDNSIKIWDKT 234
Query: 99 DTPSFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSIS 158
++ + + LCL +I G + +D+ E+ L + + H + + +
Sbjct: 235 SLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV-LNTLIHHNEAVLHLR 293
Query: 159 ISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLL 218
S NG + T SKD + +W++ + ++ + L GH V+ F D +
Sbjct: 294 FS----NG---LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF----DDKYI 342
Query: 219 ATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGL 278
+ S D +K+W S +++ H + I L V++GS+D+ IRL G L
Sbjct: 343 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 402
Query: 279 SMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPP 338
+ GH+ V + + + S + DG I++W L + R P
Sbjct: 403 RVLEGHEELVRCI---------------RFDNKRIVSGAYDGKIKVW--DLQAALDPRAP 445
Query: 339 RPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
+ + L +H+ V L+ + S S D ++ W
Sbjct: 446 ------ASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 483
Score = 59.3 bits (142), Expect = 1e-08
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 176 KDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNG 235
+D + KIW+ ++L +K L GH +V Q+ ER ++ T S D +++WD++ G
Sbjct: 224 RDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDER----VIVTGSSDSTVRVWDVNTG 276
Query: 236 WCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMG---IGHDFPVEKVL 292
+ + H + + L ++T S D +I + S +++ +GH V V
Sbjct: 277 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV- 335
Query: 293 ILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIP---------------HRP 337
+++ SAS D TI++W S +F+ R
Sbjct: 336 --------------DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL 381
Query: 338 PRPNPLDTTFKV--------IAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
D T ++ + VL H VR +R N + S + DG +K W L
Sbjct: 382 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 436
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 63.5 bits (153), Expect = 6e-10
Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 42/344 (12%)
Query: 43 IPQDPNLLERKW----NSIVRLQSKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPR 98
I QD +E W +++ R+Q + E K LQ D+++ + N+ W
Sbjct: 199 IIQDIETIESNWRCGRHNLQRIQCR-SENSKGVYCLQ--YDDEKIISGLRDNSIKIWDKT 255
Query: 99 DTPSFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSIS 158
++ + + LCL +I G + +D+ E+ L + + H + + +
Sbjct: 256 SLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV-LNTLIHHNEAVLHLR 314
Query: 159 ISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLL 218
S NG + T SKD + +W++ + ++ + L GH V+ F D +
Sbjct: 315 FS----NG---LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF----DDKYI 363
Query: 219 ATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGL 278
+ S D +K+W S +++ H + I L V++GS+D+ IRL G L
Sbjct: 364 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 423
Query: 279 SMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPP 338
+ GH+ V + + + S + DG I++W L + R P
Sbjct: 424 RVLEGHEELVRCI---------------RFDNKRIVSGAYDGKIKVW--DLQAALDPRAP 466
Query: 339 RPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
+ + L +H+ V L+ + S S D ++ W
Sbjct: 467 ------ASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 504
Score = 59.3 bits (142), Expect = 1e-08
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 176 KDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNG 235
+D + KIW+ ++L +K L GH +V Q+ ER ++ T S D +++WD++ G
Sbjct: 245 RDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDER----VIVTGSSDSTVRVWDVNTG 297
Query: 236 WCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMG---IGHDFPVEKVL 292
+ + H + + L ++T S D +I + S +++ +GH V V
Sbjct: 298 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV- 356
Query: 293 ILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIP---------------HRP 337
+++ SAS D TI++W S +F+ R
Sbjct: 357 --------------DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL 402
Query: 338 PRPNPLDTTFKV--------IAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
D T ++ + VL H VR +R N + S + DG +K W L
Sbjct: 403 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 457
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 63.5 bits (153), Expect = 6e-10
Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 42/344 (12%)
Query: 43 IPQDPNLLERKW----NSIVRLQSKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPR 98
I QD +E W +++ R+Q + E K LQ D+++ + N+ W
Sbjct: 212 IIQDIETIESNWRCGRHNLQRIQCR-SENSKGVYCLQ--YDDEKIISGLRDNSIKIWDKT 268
Query: 99 DTPSFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSIS 158
++ + + LCL +I G + +D+ E+ L + + H + + +
Sbjct: 269 SLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV-LNTLIHHNEAVLHLR 327
Query: 159 ISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLL 218
S NG + T SKD + +W++ + ++ + L GH V+ F D +
Sbjct: 328 FS----NG---LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF----DDKYI 376
Query: 219 ATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGL 278
+ S D +K+W S +++ H + I L V++GS+D+ IRL G L
Sbjct: 377 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 436
Query: 279 SMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPP 338
+ GH+ V + + + S + DG I++W L + R P
Sbjct: 437 RVLEGHEELVRCI---------------RFDNKRIVSGAYDGKIKVW--DLQAALDPRAP 479
Query: 339 RPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
+ + L +H+ V L+ + S S D ++ W
Sbjct: 480 ------ASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 59.3 bits (142), Expect = 1e-08
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 176 KDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNG 235
+D + KIW+ ++L +K L GH +V Q+ ER ++ T S D +++WD++ G
Sbjct: 258 RDNSIKIWD---KTSLECLKVLTGHTGSVLCLQYDER----VIVTGSSDSTVRVWDVNTG 310
Query: 236 WCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMG---IGHDFPVEKVL 292
+ + H + + L ++T S D +I + S +++ +GH V V
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV- 369
Query: 293 ILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIP---------------HRP 337
+++ SAS D TI++W S +F+ R
Sbjct: 370 --------------DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL 415
Query: 338 PRPNPLDTTFKV--------IAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
D T ++ + VL H VR +R N + S + DG +K W L
Sbjct: 416 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 470
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 63.5 bits (153), Expect = 6e-10
Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 42/344 (12%)
Query: 43 IPQDPNLLERKW----NSIVRLQSKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPR 98
I QD +E W +S+ R+ + E K LQ D+Q+ + N W
Sbjct: 275 IIQDIETIESNWRCGRHSLQRIHCR-SETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKN 331
Query: 99 DTPSFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSIS 158
+I + + LCL +I G + +D+ E+ L + + H + + +
Sbjct: 332 TLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM-LNTLIHHCEAVLHLR 390
Query: 159 ISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLL 218
+ NG + T SKD + +W++ + ++ + L GH V+ F D +
Sbjct: 391 FN----NGM---MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF----DDKYI 439
Query: 219 ATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGL 278
+ S D +K+W+ S +++ H + I L V++GS+D+ IRL G L
Sbjct: 440 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 499
Query: 279 SMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPP 338
+ GH+ V + + + S + DG I++W + + P
Sbjct: 500 RVLEGHEELVRCI---------------RFDNKRIVSGAYDGKIKVWDL-----VAALDP 539
Query: 339 RPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
R P T + L +H+ V L+ + S S D ++ W
Sbjct: 540 RA-PAGTL--CLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 63.2 bits (152), Expect = 8e-10
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 131 KLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDST 190
+LL+ L+ +QS H DG+ ++ S +A+ S D+ ++W+ S
Sbjct: 78 RLLKLWDLSATRCIQSLAGHGDGVNDVAWSAAG------LIASCSDDMTVRLWDAR--SK 129
Query: 191 LSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRS 250
L +K L GH C F + LLA+ S D +++WD+ G +K H I S
Sbjct: 130 LC-VKVLEGHSRYSFSCCFNPQAN--LLASTSFDETVRLWDVRTGKTLKIVHAHQDPITS 186
Query: 251 LHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPL 308
+ H G +T S D +RL W S G V K L+ + + ++ P
Sbjct: 187 VDFHRDGNIFVTSSYDGLVRL--WDSSTG---------HVLKTLVDVDNIPVGYVKFSPN 235
Query: 309 GFQHVASASRDGTIRLWKVSLPK 331
G +++ S++ + T+RLW PK
Sbjct: 236 G-RYILSSTLNNTLRLWNYKKPK 257
Score = 60.8 bits (146), Expect = 4e-09
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 146 STMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVS 205
S + H +T + S EN L ++S D K+W+L S I++LAGH V+
Sbjct: 51 SLLGHSGCVTGLKFSSNGEN-----LVSSSGDRLLKLWDL---SATRCIQSLAGHGDGVN 102
Query: 206 DCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRS--LHVHGEFVLTGSN 263
D + G L+A+CS D+ +++WD + C+K + H+++ S + + + S
Sbjct: 103 DVAWSAAG---LIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSF 159
Query: 264 DSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIR 323
D +RL +G L + H P+ V + G V S S DG +R
Sbjct: 160 DETVRLWDVRTGKTLKIVHAHQDPITSV------------DFHRDGNIFVTS-SYDGLVR 206
Query: 324 LWKVS 328
LW S
Sbjct: 207 LWDSS 211
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 62.8 bits (151), Expect = 1e-09
Identities = 43/160 (26%), Positives = 78/160 (47%), Gaps = 19/160 (11%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
L + S D K+W++ L KTL GH + V C F L+ + S D +KIW
Sbjct: 98 LVSASDDKTLKLWDVRSGKCL---KTLKGHSNYVFCCNF--NPPSNLIISGSFDETVKIW 152
Query: 231 DISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPV 288
++ G C+K+ H+ + ++H + G +++GS D R+ W + +G +
Sbjct: 153 EVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRI--WDAASGQCL-------- 202
Query: 289 EKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVS 328
K L+ +P ++ P G +++ +A+ D T++LW S
Sbjct: 203 -KTLVDDDNPPVSFVKFSPNG-KYILTATLDNTLKLWDYS 240
Score = 54.3 bits (129), Expect = 4e-07
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 148 MAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDC 207
+ H + ++S+ S E +LA++S D IW D + KTL GH +SD
Sbjct: 38 VGHTEAVSSVKFSPNGE-----WLASSSADRLIIIWGA-YDG--KYEKTLYGHNLEISDV 89
Query: 208 QFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDS 265
+ + L+ A S D LK+WD+ +G C+K+ + H+ ++ + + +++GS D
Sbjct: 90 AWSSDSSRLVSA--SDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDE 147
Query: 266 AIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
+++ +G L H PV V + + S S DG R+W
Sbjct: 148 TVKIWEVKTGKCLKTLSAHSDPVSAV-------------HFNCSGSLIVSGSYDGLCRIW 194
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 62.8 bits (151), Expect = 1e-09
Identities = 45/163 (27%), Positives = 79/163 (47%), Gaps = 19/163 (11%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
L + S D KIW++ L KTL GH + V C F + L+ + S D ++IW
Sbjct: 102 LVSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIW 156
Query: 231 DISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPV 288
D+ G C+K+ H+ + ++H + G +++ S D R+ W + +G +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCL-------- 206
Query: 289 EKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPK 331
K LI +P ++ P G +++ +A+ D T++LW S K
Sbjct: 207 -KTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGK 247
Score = 60.8 bits (146), Expect = 4e-09
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 144 LQSTMA-HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEH 202
L+ T+A H ++S+ S E +LA++S D KIW D KT++GH+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGE-----WLASSSADKLIKIWGA-YDGKFE--KTISGHKL 88
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWI--RSLHVHGEFVLT 260
+SD + LL + S D LKIWD+S+G C+K+ + H+ ++ + + +++
Sbjct: 89 GISDVAWSSDSN--LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 261 GSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDG 320
GS D ++R+ +G L H PV V H + S+S DG
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAV--------HFNRD-----GSLIVSSSYDG 193
Query: 321 TIRLW 325
R+W
Sbjct: 194 LCRIW 198
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 62.8 bits (151), Expect = 1e-09
Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 50/286 (17%)
Query: 126 GLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWEL 185
G SG++ ++ EL H IT IS + + T+SKD + +IW++
Sbjct: 169 GSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDI 228
Query: 186 ELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHT 245
L + I L+GH V+ ++ G D ++ T S+D +K+W+ + G I+ + H
Sbjct: 229 TLKKS---IICLSGHTLAVTCVKW---GGDGIIYTGSQDCTIKMWETTQGKLIRELKGHG 282
Query: 246 QWIRSLHVHGEFVL-TGSNDSAIRLTHWPSGNGLSMGIGH------DFPVEKV------- 291
WI SL + E+VL TG+ D R +P + D P V
Sbjct: 283 HWINSLALSTEYVLRTGAFDHTGR--QYPPNEEKQKALERYNKTKGDSPERLVSGSDDFT 340
Query: 292 LILIPDPQHLQPQYQPLGFQH-------------VASASRDGTIRLWKVSLPKFIPHRPP 338
+ L QP+ + G Q +ASAS D ++RLW +F+
Sbjct: 341 MFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFV----- 395
Query: 339 RPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
T F+ SW D R +L S S D ++K W +
Sbjct: 396 ------TVFRGHVGPVYQVSWSADSR----LLLSGSKDSTLKIWEI 431
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 62.0 bits (149), Expect = 2e-09
Identities = 100/417 (23%), Positives = 164/417 (38%), Gaps = 53/417 (12%)
Query: 5 KQRQSLNHAICDYVRQNEGSDELLVQLESVLLPNGSDVIPQDPNLLERKWNSIVRLQSKI 64
K + N A+ + + ELL + E+ L+ + P DP L K I S +
Sbjct: 264 KDVEGRNEALNKILHPAKNLVELLTEKEN-LINESTLESPSDPPLPPTKMKDIDYFVS-L 321
Query: 65 MELEKNCEELQKSIDEQQSSTNQISNASSDWCPRDTPSFQITLDASITALCLHPSLPIIF 124
+E E+N L K+ + + N S + DAS+ AL S ++
Sbjct: 322 LESEQNSLILGKNATDPSVFMYTMHNTLSA-----VNCAAFSDDASMFALGCADSSIHLY 376
Query: 125 IGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWE 184
++G N L S + H + +SIS E ++ + S+D T++W
Sbjct: 377 SSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQKE-----FILSCSEDGFTRLWS 431
Query: 185 LELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPH 244
+ ST I AGH + D QF G AT S D ++WD+ + ++ F H
Sbjct: 432 KDTKST---IVKYAGHNAPIWDVQFSPFG--YYFATASHDQTARLWDVEHAAPLRVFVGH 486
Query: 245 TQWIR--SLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQ 302
+ S H + ++ TGS+D R+ +G + + H PV L + D L
Sbjct: 487 QNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPV-SALCMSADGLSL- 544
Query: 303 PQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRD 362
ASA G I++W + R + +F H+S V
Sbjct: 545 -----------ASADESGIIKVWDL-----------RSSNQHVSF------VKHSSIVYS 576
Query: 363 L--RQFNDMLFSCSDDGSVKCWSLDWTNLSTTTCKKSWDLSNKGFQNCLTLDNIAFT 417
L N +L S D V W L + N + + ++S L N +N + + N++FT
Sbjct: 577 LSFSYDNKILVSGGADTDVNFWDLTYRN-NLSDGEQSPLLFNFKTKNTI-IQNLSFT 631
>7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 860
Score = 61.6 bits (148), Expect = 2e-09
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
+ + +HP+ P++ D + ++ + + H + I + P +N
Sbjct: 73 LRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFN-PKDNNT--- 128
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
A+ S D K+W+L S ++ TL GHE V+ ++ G L + + D +KIW
Sbjct: 129 FASASLDRTVKVWQL--GSNFANF-TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 185
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTH 271
D N C+++ + H Q I ++ H E VLTGS D +R+ H
Sbjct: 186 DYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWH 228
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 61.2 bits (147), Expect = 3e-09
Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 44/205 (21%)
Query: 194 IKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV 253
I+ GH V QF R LL T S D + IWD+ G I+ H+ +++L+
Sbjct: 295 IQEFKGHMDGVLTLQFNYR----LLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF 350
Query: 254 HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHV 313
++TGS D IR+ ++ +G +S GH V V YQ + +
Sbjct: 351 DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSV-----------DSYQKV----I 395
Query: 314 ASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVR--DLRQFNDMLF 371
S S D T+++W V + L H WV L + F
Sbjct: 396 VSGSADKTVKVWHVE------------------SRTCYTLRGHTEWVNCVKLHPKSFSCF 437
Query: 372 SCSDDGSVKCWSLDWTNLSTTTCKK 396
SCSDD +++ W ++ T +C K
Sbjct: 438 SCSDDTTIRMW-----DIRTNSCLK 457
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 61.2 bits (147), Expect = 3e-09
Identities = 74/277 (26%), Positives = 118/277 (41%), Gaps = 61/277 (22%)
Query: 150 HMDGITSIS---ISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHI--KTLAGHEHTV 204
H ITS+S I L +P LA++SKD KIW+ T+S + T++GH ++V
Sbjct: 228 HSKWITSLSWEPIHLVKPGSKPR-LASSSKDGTIKIWD-----TVSRVCQYTMSGHTNSV 281
Query: 205 SDCQFFERGADLLLATCSRDLYLKIWDI-SNGWCIKSFQPHTQWIRSLHVHGEFVL-TGS 262
S ++ +G LL + S D +++WDI S G CI + H W+ L + ++ L G+
Sbjct: 282 SCVKWGGQG---LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGA 338
Query: 263 NDSAIRLTHWP-----------------SGNG----------LSMGIGHDFPVEKVLILI 295
D + P +GN +M + + K + +
Sbjct: 339 FDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARM 398
Query: 296 PDPQHL--QPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVL 353
Q L + P G +++ SAS D +I+LW KFI +TF+
Sbjct: 399 TGHQKLVNHVAFSPDG-RYIVSASFDNSIKLWDGRDGKFI-----------STFRGHVAS 446
Query: 354 TDHNSWVRDLRQFNDMLFSCSDDGSVKCWSLDWTNLS 390
+W D R +L SCS D ++K W + LS
Sbjct: 447 VYQVAWSSDCR----LLVSCSKDTTLKVWDVRTRKLS 479
Score = 53.1 bits (126), Expect = 8e-07
Identities = 50/193 (25%), Positives = 84/193 (42%), Gaps = 28/193 (14%)
Query: 197 LAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIR--SLHVH 254
+AGH T+ C F + T + D +IWD + + + H W+ S
Sbjct: 139 IAGHGSTIL-CSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPD 197
Query: 255 GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVA 314
GE + TGS D+ IRL W +G +G + + L +P HL +P +A
Sbjct: 198 GEVIATGSMDNTIRL--WDPKSGQCLGDALRGHSKWITSLSWEPIHL---VKPGSKPRLA 252
Query: 315 SASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIA-VLTDHNSWVRDLRQFND-MLFS 372
S+S+DGTI++W DT +V ++ H + V ++ +L+S
Sbjct: 253 SSSKDGTIKIW------------------DTVSRVCQYTMSGHTNSVSCVKWGGQGLLYS 294
Query: 373 CSDDGSVKCWSLD 385
S D +V+ W ++
Sbjct: 295 GSHDRTVRVWDIN 307
>Hs4757988 [R] KOG0645 WD40 repeat protein
Length = 339
Score = 61.2 bits (147), Expect = 3e-09
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
YLA+ S D T IW+ D + TL GHE+ V + G LLATCSRD + +
Sbjct: 75 YLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPSGN--LLATCSRDKSVWV 131
Query: 230 WDISNG---WCIKSFQPHTQWIRSL--HVHGEFVLTGSNDSAIRLTHWPSGNGLSMGI-- 282
W++ C+ HTQ ++ + H E + + S D ++L + +
Sbjct: 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLE 191
Query: 283 GHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLP 330
GH+ V + + P G Q +AS S D T+R+W+ LP
Sbjct: 192 GHESTVWSLA------------FDPSG-QRLASCSDDRTVRIWRQYLP 226
>At5g49430 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1583
Score = 61.2 bits (147), Expect = 3e-09
Identities = 52/165 (31%), Positives = 75/165 (44%), Gaps = 18/165 (10%)
Query: 191 LSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRS 250
+ +IK L GH + V C +R ++ T S D +K+W + +C+ S + H I
Sbjct: 235 MQNIKRLRGHRNAVY-CAILDRSGRYVI-TGSDDRLVKVWSMDTAYCLASCRGHEGDITD 292
Query: 251 LHVHGE--FVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPL 308
L V F+ + SND IR+ P G +S+ GH V + P+ P YQ L
Sbjct: 293 LAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAF---SPRPGSP-YQLL 348
Query: 309 GFQHVASASRDGTIRLWKVSLPKFIPH----RPPRPNPLDTTFKV 349
S+S DGT R+W +F P RPP P+ TF V
Sbjct: 349 ------SSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGDCFTFIV 387
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 60.8 bits (146), Expect = 4e-09
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+ + S D KI+E+ T KTL GH + V C F + + L+ + S D ++IW
Sbjct: 144 VVSASDDKTLKIFEIV---TSRMTKTLKGHNNYVFCCNFNPQSS--LVVSGSFDESVRIW 198
Query: 231 DISNGWCIKSFQPHTQWIR--SLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPV 288
D+ G CIK+ H+ + S + G + +GS D +R+ W + NG +
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRI--WDTANGQCI-------- 248
Query: 289 EKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFK 348
K L+ +P ++ P G +++ +++ D T++LW S K + N F
Sbjct: 249 -KTLVDDENPPVAFVKFSPNG-KYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 349 VIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSL 384
+V W+ S S+D + W+L
Sbjct: 307 NFSV--TGGKWI----------ISGSEDCKIYIWNL 330
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 60.8 bits (146), Expect = 4e-09
Identities = 68/341 (19%), Positives = 135/341 (38%), Gaps = 36/341 (10%)
Query: 43 IPQDPNLLERKWNSIVRLQSKIMELEKNCEELQ-KSIDEQQSSTNQISNASSDWCPRDTP 101
I D + +E W + + +I +N + + D+ + + N W D
Sbjct: 182 IMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQ 241
Query: 102 SFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISL 161
+ + + + LCL +I G + +D+ E+ + + + H + + + +
Sbjct: 242 CVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEM-VNTLIHHCEAVLHLRFN- 299
Query: 162 PNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATC 221
NG + T SKD + +W++ S ++ + L GH V+ F E+ + +
Sbjct: 300 ---NGM---MVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEK----YIVSA 349
Query: 222 SRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMG 281
S D +K+W S+ +++ H + I L V++GS+D++IRL G L +
Sbjct: 350 SGDRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVL 409
Query: 282 IGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPN 341
GH+ V + + + S + DG I++W + + P
Sbjct: 410 EGHEELVRCI---------------RFDTKRIVSGAYDGKIKVWDL-VAALDPRAASNTL 453
Query: 342 PLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCW 382
L+T L +H V L+ + S S D ++ W
Sbjct: 454 CLNT-------LVEHTGRVFRLQFDEFQIVSSSHDDTILIW 487
>CE29136 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1232
Score = 60.5 bits (145), Expect = 5e-09
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 47/230 (20%)
Query: 224 DLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEF--VLTGSNDSAIRLTHWPSGNGLSMG 281
D +K+W+ CI + H +IR+ H ++ +++ S+D +R+ +W S N +++
Sbjct: 74 DYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAIL 133
Query: 282 IGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVS--LPKFIP--HRP 337
GH+ V + Q+ P VASAS D T+R+W +S K +P P
Sbjct: 134 TGHNHYV------------MCAQFHPTE-DLVASASLDQTVRVWDISGLRKKQMPGGGAP 180
Query: 338 PRP---------NPLDTTFKVIAVLTDHN---SWVRDLRQFNDMLFSCSDDGSVKCWSLD 385
RP D K VL H+ +WV N +L S SDD VK W +
Sbjct: 181 SRPTGGQQAELFGQPDAVVK--HVLEGHDRGVNWVA-FHHTNPILVSGSDDRQVKIWRYN 237
Query: 386 WTNLSTTTCKKSWDL-SNKGFQNCLTLDNIAFTGLPSRKLLFSGSSEGTL 434
T K+W+L S +G N + ++ F P+ L+ S S + ++
Sbjct: 238 ET--------KAWELDSCRGHYN--NVSSVIFH--PNADLILSNSEDKSI 275
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 60.5 bits (145), Expect = 5e-09
Identities = 48/186 (25%), Positives = 83/186 (43%), Gaps = 24/186 (12%)
Query: 148 MAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDC 207
+ H + S + S P + ++ ++S D ++W +L++ L K GH + V D
Sbjct: 415 LGHSGPVYSATFSPPGD-----FVLSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDA 466
Query: 208 QFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAI 267
QF G A+CS D +IW + ++ H + H + ++ TGS+D +
Sbjct: 467 QFSPFGH--YFASCSHDRTARIWSMDRIQPLRIMAGHLSDV-DWHPNCNYIATGSSDKTV 523
Query: 268 RLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKV 327
RL +G + + IGH V L + PD +++ AS DGTI +W +
Sbjct: 524 RLWDVQTGECVRIFIGHRSMVLS-LAMSPDGRYM------------ASGDEDGTIMMWDL 570
Query: 328 SLPKFI 333
S + I
Sbjct: 571 STARCI 576
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 60.1 bits (144), Expect = 6e-09
Identities = 67/305 (21%), Positives = 124/305 (39%), Gaps = 37/305 (12%)
Query: 79 DEQQSSTNQISNASSDWCPRDTPSFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDIL 138
D+ + + N W +D +I + + LCL +I G + +D+
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVE 290
Query: 139 NVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLA 198
E +++ + H + + + + NG + T SKD + +W++ ++ + L
Sbjct: 291 TGEC-IKTLIHHCEAVLHLRFA----NG---IMVTCSKDRSIAVWDMVSPRDITIRRVLV 342
Query: 199 GHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFV 258
GH V+ F +R + + S D +K+W + +++ H + I L G V
Sbjct: 343 GHRAAVNVVDFDDR----YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLV 398
Query: 259 LTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASR 318
++GS+D+ IRL SG L + GH+ E V + D + + S +
Sbjct: 399 VSGSSDNTIRLWDIHSGVCLRVLEGHE---ELVRCIRFDE------------KRIVSGAY 443
Query: 319 DGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFND-MLFSCSDDG 377
DG I++W + P L + + L H V L QF+D + S S D
Sbjct: 444 DGKIKVWDLQAAL-------DPRALSSEI-CLCSLVQHTGRVFRL-QFDDFQIVSSSHDD 494
Query: 378 SVKCW 382
++ W
Sbjct: 495 TILIW 499
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 59.3 bits (142), Expect = 1e-08
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 57/260 (21%)
Query: 135 YDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHI 194
+D+ + +L L T H+ + + +S R YL + +D K W+LE + + H
Sbjct: 231 WDLASGKLKLSLT-GHISTVRGVIVST-----RSPYLFSCGEDKQVKCWDLEYNKVIRHY 284
Query: 195 KTLAGHEHTVSDCQFFERGADL-----LLATCSRDLYLKIWDISNGWCIKSFQPHTQWIR 249
GH V G DL +L TCSRD +IWD+ + + HT +
Sbjct: 285 H---GHLSAVY-------GLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVA 334
Query: 250 SLHVHG--EFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQP 307
++ ++TGS+D+ IRL +G H V V++ P+H
Sbjct: 335 TVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVL---HPRHYT----- 386
Query: 308 LGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFN 367
AS S D I+ WK FI + L+ HN+ + L +
Sbjct: 387 -----FASGSPD-NIKQWKFPDGSFIQN-----------------LSGHNAIINTLTVNS 423
Query: 368 D-MLFSCSDDGSVKCWSLDW 386
D +L S +D+G++ W DW
Sbjct: 424 DGVLVSGADNGTMHLW--DW 441
>Hs22052079 [R] KOG0266 WD40 repeat-containing protein
Length = 426
Score = 58.5 bits (140), Expect = 2e-08
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 110 SITALCLHP-SLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRP 168
SIT+ C P S + + LD + +D+ + L T AH + I++ +
Sbjct: 232 SITSCCFDPDSQRVASVSLDRCIKI-WDVTSQATLLTITKAHSNAISNCCFTFSGH---- 286
Query: 169 AYLATTSKDLNTKIWEL---ELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDL 225
+L T+S D N KIW + E + + + + GHE +VS C F + L+ R +
Sbjct: 287 -FLCTSSWDKNLKIWNVHTGEFRNCGACVTLMQGHEGSVSSCHFARDSSFLISGGFDRTV 345
Query: 226 YLKIWDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTGSNDSAIRL 269
IWD++ G+ S + H W+ + + + +++L+ S D +RL
Sbjct: 346 --AIWDVAEGYRKLSLKGHNDWVMDVAISNNKKWILSASKDRTMRL 389
>CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 287
Score = 58.2 bits (139), Expect = 2e-08
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 54 WNSIVRLQSKIMELEKNCEELQKSIDEQQSSTNQISNASSDWCPR--DTPSFQITLDAS- 110
WN + K ME+ + K I + N I+ AS D R D +F + + +
Sbjct: 35 WNYDTKTLVKAMEVSEKSTRAAKFIHRK----NWIATASDDQQIRIFDAETFSLINEFTA 90
Query: 111 ----ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENG 166
I +L +HP+LP + D K+ +D N Q H I I+++ P +
Sbjct: 91 HSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVN-PED-- 147
Query: 167 RPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLY 226
P + S D K+W+L I TL GHE V+ +F G + + S D
Sbjct: 148 -PEMFVSGSLDKTLKVWKL---GEQESICTLEGHEKGVNCVEFLTGGR---IVSGSDDCS 200
Query: 227 LKIWDISNGWCIKSFQ-PHTQWIRSLHVHGEFVLTGSNDSAIRL 269
+ +WDI CI++ + H + + ++++G+ DS +++
Sbjct: 201 ICVWDIQTQKCIETLKNAHKNNVTFVTPFKTWIISGAEDSTVKI 244
>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 923
Score = 57.8 bits (138), Expect = 3e-08
Identities = 40/165 (24%), Positives = 81/165 (48%), Gaps = 18/165 (10%)
Query: 109 ASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRP 168
A + + HP+ ++ +G SG+ YD+ + L Q +M + + ++S++ E
Sbjct: 261 AKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQ-NPVNTVSVNQTGE---- 315
Query: 169 AYLATTSKDLNTKI---WELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDL 225
+LA S L + W+ E S+I GH + + + G+ ++ T S D
Sbjct: 316 -WLAFGSSKLGQLLVYEWQSE-----SYILKQQGHFDSTNSLAYSPDGSRVV--TASEDG 367
Query: 226 YLKIWDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTGSNDSAIR 268
+K+WDI++G+C+ +F+ HT + ++ G+ + + S D +R
Sbjct: 368 KIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVR 412
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 57.8 bits (138), Expect = 3e-08
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 25/180 (13%)
Query: 150 HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQF 209
H +T +S+S PN+ ++AT+S D KIW T TL GH +S ++
Sbjct: 53 HEKSVTCVSVS-PNKR----WIATSSSDGTIKIWSA---LTFRLECTLFGHYRGISQVKW 104
Query: 210 FERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAI 267
LA+ S D ++IWD ++ + HT ++ S+ + G +++GS D +
Sbjct: 105 AT--GSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETV 162
Query: 268 RLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKV 327
R+ + G L M H P+ V I A+AS DG R+W V
Sbjct: 163 RIWNLQDGTCLRMLPAHSEPIISVSISADGTL-------------CATASYDGMARIWDV 209
Score = 52.4 bits (124), Expect = 1e-06
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 108 DASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGR 167
+ S+T + + P+ I G + + L L + H GI+ + + ++
Sbjct: 54 EKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLEC-TLFGHYRGISQVKWATGSK--- 109
Query: 168 PAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYL 227
YLA+ S D +IW+ E + ++ L GH + VS F G LL + S D +
Sbjct: 110 --YLASASDDKTIRIWDFEKRCS---VRCLKGHTNYVSSIDFNPLGT--LLVSGSWDETV 162
Query: 228 KIWDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTGSNDSAIRLTHWPSGNGL 278
+IW++ +G C++ H++ I S+ + G T S D R+ SG L
Sbjct: 163 RIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCL 215
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 57.8 bits (138), Expect = 3e-08
Identities = 52/219 (23%), Positives = 92/219 (41%), Gaps = 42/219 (19%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
+L TT D + ++W+LE + H + GH V D F + G+ L T D + ++
Sbjct: 337 FLGTTCYDRSWRLWDLEAQEEILHQE---GHSMGVYDIAFHQDGS--LAGTGGLDAFGRV 391
Query: 230 WDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFP 287
WD+ G CI + H + I ++ +G + TGS D+ ++ W D
Sbjct: 392 WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKV--W------------DLR 437
Query: 288 VEKVLILIPDPQHLQP--QYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDT 345
+ + IP Q+L +++P+ + + + D T ++W P +PL T
Sbjct: 438 QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW----------THPGWSPLKT 487
Query: 346 TFKVIAVLTDHNSWVR--DLRQFNDMLFSCSDDGSVKCW 382
L H V D+ ++ +CS D + K W
Sbjct: 488 -------LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 57.4 bits (137), Expect = 4e-08
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 196 TLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLH--V 253
++ GH+ T+ QF + L+ T S D ++WD I + + HT W+ +
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLV-TGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAP 187
Query: 254 HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHV 313
+ TGS D+ IR W G +G + ++ L P HL P P +
Sbjct: 188 DASIIATGSMDNTIRF--WDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPY---LL 242
Query: 314 ASASRDGTIRLWKVSL 329
AS S+D T+R+W V L
Sbjct: 243 ASGSKDNTVRIWNVKL 258
>YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1201
Score = 57.0 bits (136), Expect = 5e-08
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 48/272 (17%)
Query: 181 KIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKS 240
++W+ + + L + HE V F + + D +K+W + C+ +
Sbjct: 36 QLWDYRMGTLLHRFED---HEGPVRGLDFHP--TQPIFVSAGDDYTIKVWSLDTNKCLYT 90
Query: 241 FQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDP 298
H ++R++ H E ++++ S+D IR+ +W + ++ GH+ V
Sbjct: 91 LTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFV---------- 140
Query: 299 QHLQPQYQPLGFQHVASASRDGTIRLWKVS----------LPKFIPHRPPRPNPLDTTF- 347
+ Q+ P + SAS D TIR+W +S F + N LD +
Sbjct: 141 --MCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSLG 197
Query: 348 --KVIAVLTDHNSWVR--DLRQFNDMLFSCSDDGSVKCWSLDWTNLSTTTCKKSWDLSN- 402
V +L H V ++ S SDD VK W + T K+W++
Sbjct: 198 DCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSAT--------KAWEVDTC 249
Query: 403 KGFQNCLTLDNIAFTGLPSRKLLFSGSSEGTL 434
+G N +D++ F P + L+ S + TL
Sbjct: 250 RGHTN--NVDSVIFH--PHQNLIISVGEDKTL 277
>SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 775
Score = 57.0 bits (136), Expect = 5e-08
Identities = 46/186 (24%), Positives = 83/186 (43%), Gaps = 21/186 (11%)
Query: 216 LLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSG 275
++++TCS + I+D G I+S + H + + G+ ++TGS D +R+ +G
Sbjct: 419 IIVSTCSPRI--NIYDTKTGVLIRSLEEHEGDVWTFEYVGDTLVTGSTDRTVRVWDLRTG 476
Query: 276 NGLSMGIGHDFPVEKVLIL-----IPDPQHLQPQYQPLGFQ------HVASASRDGTIRL 324
+ GH + + I+ D ++ + +P ++ S+SRD TIRL
Sbjct: 477 ECKQVFYGHTSTIRCIKIVQGNQSTTDTDDVEKENRPASNDANSMPPYIISSSRDCTIRL 536
Query: 325 WKVSL---PKF--IPHRPPRPNPL---DTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDD 376
W + P F + P + N T I L H VR++ D++ S S D
Sbjct: 537 WSLPCLDDPPFVNVNENPDQNNDFTSATTNPFYIRTLRGHTDSVREVACLGDLIVSASYD 596
Query: 377 GSVKCW 382
G+++ W
Sbjct: 597 GTLRVW 602
>At2g26060 [R] KOG0645 WD40 repeat protein
Length = 323
Score = 56.6 bits (135), Expect = 7e-08
Identities = 69/277 (24%), Positives = 107/277 (37%), Gaps = 47/277 (16%)
Query: 139 NVEL-PLQSTMAHMDGITSISIS--LPNENGRPAYLATTSKDLNTKIWELELDSTLSHIK 195
N+EL +Q H D + S++ + + +G LA+ S D +IWE S+LS
Sbjct: 4 NLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWE---QSSLSRSW 60
Query: 196 TLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDI--SNGWCIKSFQPHTQWIRSL-- 251
T H TV C + G LLAT S D IW S CI + + H ++S+
Sbjct: 61 TCKTHTRTVRSCAWSPSGQ--LLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSW 118
Query: 252 HVHGEFVLTGSNDSAIRLTHWPSGNGLSMGI---GHDFPVEKVLILIPDPQHLQPQYQPL 308
+ G + T S D ++ + GN GH V+ V Q+ P
Sbjct: 119 NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMV------------QWHPT 166
Query: 309 GFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNS------WVRD 362
+ S S D TI++W D ++ + L + N+ W
Sbjct: 167 -MDVLFSCSYDNTIKVWW-------------SEDDDGEYQCVQTLGESNNGHSSTVWSIS 212
Query: 363 LRQFNDMLFSCSDDGSVKCWSLDWTNLSTTTCKKSWD 399
D + +CSDD ++K W D + + WD
Sbjct: 213 FNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWD 249
>At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 913
Score = 56.6 bits (135), Expect = 7e-08
Identities = 42/163 (25%), Positives = 69/163 (41%), Gaps = 9/163 (5%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
I + +HP+LP + D + +D L Q H + ++ + + N
Sbjct: 95 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNT---- 150
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
A+ S D KIW L + TL H V+ +F G L T S D K+W
Sbjct: 151 FASASLDRTIKIWNL---GSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVW 207
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTH 271
D C+++ + HT + ++ H E ++TGS D +R+ H
Sbjct: 208 DYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 250
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 56.6 bits (135), Expect = 7e-08
Identities = 47/196 (23%), Positives = 86/196 (42%), Gaps = 25/196 (12%)
Query: 145 QSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTV 204
QS H + S++ ++ LA S + K+W++E ++ GH
Sbjct: 82 QSLCGHTSAVDSVAF----DSAEVLVLAGASSGV-IKLWDVE---EAKMVRAFTGHRSNC 133
Query: 205 SDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTGS 262
S +F G LA+ S D LKIWDI CI++++ H++ I ++ G +V++G
Sbjct: 134 SAVEFHPFGE--FLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGG 191
Query: 263 NDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTI 322
D+ +++ +G L H+ P+ + + PL F +A+ S D T+
Sbjct: 192 LDNVVKVWDLTAGKLLHEFKFHEGPIRSL------------DFHPLEFL-LATGSADRTV 238
Query: 323 RLWKVSLPKFIPHRPP 338
+ W + + I P
Sbjct: 239 KFWDLETFELIGSTRP 254
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 56.2 bits (134), Expect = 9e-08
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
YL + S+D + ++W ++ + L K GH V D F G AT S D ++
Sbjct: 393 YLLSCSEDASARLWSVDTKTALVAYK---GHTGPVWDVAFGPFGH--YFATASHDQTAQL 447
Query: 230 WDISNGWCIKSFQPHTQWIR--SLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFP 287
W + + ++ F H + + H + +VLTGS+D RL G+ + + GH P
Sbjct: 448 WSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQP 507
Query: 288 VEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTF 347
V V I PD + ASA +G I LW + T
Sbjct: 508 VTAVAI-APDGHTM------------ASADSEGLIHLWDIG-----------------TG 537
Query: 348 KVIAVLTDH--NSWVRDLRQFNDMLFSCSDDGSVKCWSLDWTN 388
+ I + H N + + + +L S D +V+ W + TN
Sbjct: 538 RRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTN 580
>Hs13491164 [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 322
Score = 56.2 bits (134), Expect = 9e-08
Identities = 67/248 (27%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
LAT S D + KI+++ + I L GHE V + +LA+CS D + IW
Sbjct: 28 LATCSSDRSVKIFDVRNGGQIL-IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86
Query: 231 DISNGWCIKSFQP--HTQWIRSL----HVHGEFVLTGSNDSAIRLTHWPS---------G 275
NG KS + H + S+ H +G + GS+D AI L +
Sbjct: 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN 146
Query: 276 NGLSMGIGHDFPVEKVL--ILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFI 333
N ++G V+ LI P +P Y + AS D I+LWK
Sbjct: 147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNY----IKRFASGGCDNLIKLWK------- 195
Query: 334 PHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDM------LFSCSDDGSVKCWSLDWT 387
D +K L H+ WVRD+ + + SCS DG V W+ D
Sbjct: 196 -------EEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248
Query: 388 NLSTTTCK 395
+ +T + K
Sbjct: 249 SSNTWSPK 256
>At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 921
Score = 56.2 bits (134), Expect = 9e-08
Identities = 42/163 (25%), Positives = 68/163 (40%), Gaps = 9/163 (5%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
I + +HP+LP + D + +D N Q H + + + + N
Sbjct: 105 IRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT---- 160
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
A+ S D KIW L + TL H+ V+ +F G L T S D K+W
Sbjct: 161 FASASLDRTIKIWNL---GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 217
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTH 271
D C+++ HT + ++ H E ++TGS D +R+ H
Sbjct: 218 DYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 260
Score = 49.7 bits (117), Expect = 9e-06
Identities = 52/218 (23%), Positives = 91/218 (40%), Gaps = 49/218 (22%)
Query: 224 DLYLKIWDISNGWCIKSFQPHTQWIRSLHVHG--EFVLTGSNDSAIRLTHWPSGNGLSMG 281
D+Y+++++ + +K F+ H+ +IR + VH +VL+ S+D I+L W +G +
Sbjct: 81 DMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI 140
Query: 282 I-GHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRP 340
GH V +V+ + P ASAS D TI++W + P
Sbjct: 141 FEGHSHYVMQVV------------FNPKDTNTFASASLDRTIKIWNLGSP---------- 178
Query: 341 NPLDTTFKVIAVLTDHNSWVRDLRQF----NDMLFSCSDDGSVKCWSLDWTNLSTTTCKK 396
D F L H V + F L + SDD + K W + T +C +
Sbjct: 179 ---DPNF----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW-----DYQTKSCVQ 226
Query: 397 SWDLSNKGFQNCLTLDNIAFTGLPSRKLLFSGSSEGTL 434
+ D + + + F P ++ +GS +GT+
Sbjct: 227 TLD------GHTHNVSAVCFH--PELPIIITGSEDGTV 256
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 55.8 bits (133), Expect = 1e-07
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 41/275 (14%)
Query: 143 PLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEH 202
P+ S H +TS+S N ++ T+S+D K+W++ S + K H
Sbjct: 67 PVASFEGHRGNVTSVSFQQDNR-----WMVTSSEDGTIKVWDVRSPSIPRNYK----HNA 117
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQW-IRSLHVHGEFVLTG 261
V++ +L+ +C RD ++IWD+ C P ++SL + + +
Sbjct: 118 PVNEVVIHPNQGELI--SCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLA 175
Query: 262 SNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGT 321
+ ++ W N H PV K ++ +H+A+ S D T
Sbjct: 176 AANTKGNCYVWEMPN--HTDASHLKPVTK---FRAHSTYITRILLSSDVKHLATCSADHT 230
Query: 322 IRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFND--MLFSCSDDGSV 379
R+W + D FK+ L H WV D D L + S D V
Sbjct: 231 ARVWSI----------------DDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYV 274
Query: 380 KCWSLDWTNLSTTTCKKSWDLSNKGFQNCLTLDNI 414
+ W +LST + + +KG C+ L+++
Sbjct: 275 RLW-----DLSTREIVRQYGGHHKG-AVCVALNDV 303
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 55.8 bits (133), Expect = 1e-07
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 31/198 (15%)
Query: 147 TMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHI----KTLAGHEH 202
T++ DG+T++++S G Y+A S D ++W+ E + + ++ GH+
Sbjct: 522 TLSIEDGVTTVAVS----PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 577
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISN------------GWCIKSFQPHTQWIRS 250
+V F G ++ + R + K+W++ N G C ++ H ++ S
Sbjct: 578 SVYSVVFTRDGQSVVSGSLDRSV--KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 635
Query: 251 LHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPL 308
+ + E++L+GS D + SGN L M GH V V + P L P+Y
Sbjct: 636 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSP--LGPEYNVF 693
Query: 309 GFQHVASASRDGTIRLWK 326
A+ S D R+WK
Sbjct: 694 -----ATGSGDCKARIWK 706
>At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 926
Score = 55.8 bits (133), Expect = 1e-07
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 9/163 (5%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
I + +HP+LP + D + +D Q H + ++ + + N
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT---- 157
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
A+ S D KIW L + TL H+ V+ +F G L T S D K+W
Sbjct: 158 FASASLDRTIKIWNL---GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTH 271
D C+++ + HT + ++ H E ++TGS D +R+ H
Sbjct: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 55.5 bits (132), Expect = 2e-07
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
LAT+S D KIW+L S L+H T+ H VSD ++ E G + +AT D +K+W
Sbjct: 364 LATSSADDTVKIWDLRKVS-LAH--TIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLW 420
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRL 269
+ N IKS H + + S+ +G+ ++ D I+L
Sbjct: 421 NPLNCSLIKSMVGHEEKVMSVDGYGDRFISSGYDRTIKL 459
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 55.5 bits (132), Expect = 2e-07
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 27/179 (15%)
Query: 151 MDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFF 210
MD T+ + + + P Y A+ S D ++W + L + AGH V+ C F
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPD---RLWATDHYQPL---RIFAGHLADVN-CTRF 580
Query: 211 ERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL--HVHGEFVLTGSNDSAIR 268
++ + AT S D +++WD+ NG C++ F H I SL +G F+ TG+ D +
Sbjct: 581 HPNSNYV-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 639
Query: 269 LTHWPSGNGLSMG--IGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
L W G+GL +G GH V + ++ G + +AS S D T+RLW
Sbjct: 640 L--WDIGHGLMVGELKGHTDTVCSL------------RFSRDG-EILASGSMDNTVRLW 683
>Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 808
Score = 55.5 bits (132), Expect = 2e-07
Identities = 34/101 (33%), Positives = 50/101 (48%), Gaps = 7/101 (6%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
LAT S D K+W L+ S +KT GH+ +V F RG LL + D +K+W
Sbjct: 536 LATASADGTIKLWALQ---DFSCLKTFEGHDASVLKVAFVSRGTQLL--SSGSDGLVKLW 590
Query: 231 DISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAIRL 269
I N C+++ H + LH + LTG++DS + L
Sbjct: 591 TIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVIL 631
Score = 50.8 bits (120), Expect = 4e-06
Identities = 67/283 (23%), Positives = 108/283 (37%), Gaps = 60/283 (21%)
Query: 172 ATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWD 231
A+ +KD + +IW + + + +GH H+V R + L T S+D +K+W
Sbjct: 392 ASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTV-CCSRLKESFLVTGSQDCTVKLWP 450
Query: 232 ISNGWCIKSFQP---------------HTQWIRSLHV--HGEFVLTGSNDSAIRLTHWPS 274
+ K+ P H + I S+ + + + + TGS D +L P
Sbjct: 451 LPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQ 510
Query: 275 GNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIP 334
L + GH + V Q+ P+ Q +A+AS DGTI+LW +
Sbjct: 511 CQLLGVFSGHRRGLWCV------------QFSPMD-QVLATASADGTIKLWALQ------ 551
Query: 335 HRPPRPNPLDTTFKVIAVLTDHNSWVRDLR--QFNDMLFSCSDDGSVKCWSLDWTNLSTT 392
F + H++ V + L S DG VK W++ T
Sbjct: 552 -----------DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRT 600
Query: 393 TC---KKSWDLSNKGFQNCLTLDNIAFTGL-PSRKLLFSGSSE 431
K W L +C LD+ A TG SR +L+ +E
Sbjct: 601 LDAHEDKVWGL------HCSRLDDHALTGASDSRVILWKDVTE 637
>At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains DENN domain
Length = 1264
Score = 55.5 bits (132), Expect = 2e-07
Identities = 38/154 (24%), Positives = 71/154 (45%), Gaps = 18/154 (11%)
Query: 173 TTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDI 232
T + D K+W++ D ++ T+ + ++ + +LA RD IWDI
Sbjct: 1032 TAAHDGTVKMWDVRTDMCVA---TVGRCSSAILSLEYDDSTG--ILAAAGRDTVANIWDI 1086
Query: 233 SNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVL 292
+G + + HT+WIRS+ + + ++TGS+D R+ G+ ++ H PV+ V
Sbjct: 1087 RSGKQMHKLKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSV- 1145
Query: 293 ILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWK 326
+Y P + + + S DG +R W+
Sbjct: 1146 -----------EYSPFD-KGIITGSADGLLRFWE 1167
>7303130 [R] KOG0645 WD40 repeat protein
Length = 335
Score = 55.5 bits (132), Expect = 2e-07
Identities = 69/273 (25%), Positives = 106/273 (38%), Gaps = 70/273 (25%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
YLA+ S D T IW + TL GHE+ V + G LLATCSRD + I
Sbjct: 73 YLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRSGG--LLATCSRDKSVWI 129
Query: 230 WDISNG---WCIKSFQPHTQWIRSL--HVHGEFVLTGSNDSAIRL-------THW----- 272
W+++ C PHTQ ++ + H + + + S D+ I++ W
Sbjct: 130 WEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTAT 189
Query: 273 -PSGNGLSMGIGHDFPVEKVL---------------------ILIPDPQHLQPQYQPLGF 310
S GI D E+++ + PD Q + +
Sbjct: 190 LTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSG 249
Query: 311 QH---------------VASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTD 355
QH +A+A D IR++K S +P P T ++ A
Sbjct: 250 QHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDS----KPDEP----TFEQITAEEGA 301
Query: 356 HNSWVRDLRQFNDM----LFSCSDDGSVKCWSL 384
H+ V + Q+N + L SCSDDG++K W +
Sbjct: 302 HDQDVNSV-QWNPVVAGQLISCSDDGTIKIWKV 333
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 55.1 bits (131), Expect = 2e-07
Identities = 65/274 (23%), Positives = 111/274 (39%), Gaps = 65/274 (23%)
Query: 126 GLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWEL 185
G +G++L +D + ++ H IT +S + N Y+A++SKD + +IW
Sbjct: 174 GCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW-- 231
Query: 186 ELDSTLSHI-KTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPH 244
D+T + L GH +V+ ++ G D LL + S+D +K+W +G ++ Q H
Sbjct: 232 --DTTAGRCERILTGHTQSVTCLRW---GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGH 286
Query: 245 TQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQ 304
W+ ++ + S D A+R G P E + +PQ LQ
Sbjct: 287 GHWVNTMAL--------STDYALR-------------TGAFEPAEASV----NPQDLQGS 321
Query: 305 YQPL--------------GFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVI 350
Q L G + + S S D T+ LW + K K +
Sbjct: 322 LQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK----------------KPL 365
Query: 351 AVLTDHNSWVRDLRQFND--MLFSCSDDGSVKCW 382
+T H + + + D ++ S S D S+K W
Sbjct: 366 TRMTGHQALINQVLFSPDSRIVASASFDKSIKLW 399
Score = 53.9 bits (128), Expect = 5e-07
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 196 TLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLH--V 253
+L GH V F G LA+ S D ++ WD+S + + H W+ S+
Sbjct: 109 SLEGHSEAVISVAFSPTGK--YLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP 166
Query: 254 HGEFVLTGSNDSAIRLTHWPSGNGLSMG---IGHDFPVEKVLILIPDPQHLQPQYQPLGF 310
G+ + +G + I L W G +G GH + + L +P H P+ +
Sbjct: 167 DGKKLASGCKNGQILL--WDPSTGKQVGRTLAGHS---KWITGLSWEPLHANPECR---- 217
Query: 311 QHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFND-M 369
+VAS+S+DG++R+W T + +LT H V LR D +
Sbjct: 218 -YVASSSKDGSVRIWDT-----------------TAGRCERILTGHTQSVTCLRWGGDGL 259
Query: 370 LFSCSDDGSVKCW 382
L+S S D ++K W
Sbjct: 260 LYSASQDRTIKVW 272
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 55.1 bits (131), Expect = 2e-07
Identities = 50/222 (22%), Positives = 87/222 (38%), Gaps = 39/222 (17%)
Query: 145 QSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTV 204
Q+ +H ++S+ S +GR A+ K + T D ++ GHE+ +
Sbjct: 18 QTLTSHNRAVSSVKFS---SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 205 SDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGS 262
SD F + + S D LK+WD+ G IK+ HT + ++ + +++GS
Sbjct: 75 SDVAFSSDAR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGS 132
Query: 263 NDSAIRLTHWPSGNGLSMGIGHDFPVE-------------------------------KV 291
D +R+ +G L + H PV K
Sbjct: 133 FDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 292 LILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFI 333
LI +P ++ P G + + + D T+RLW +S KF+
Sbjct: 193 LIDDENPPVSFVRFSPNG-KFILVGTLDNTLRLWNISSAKFL 233
Score = 52.4 bits (124), Expect = 1e-06
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 163 NENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCS 222
N N + + + S D +IW++ +T +K L H V+ F G+ L+ + S
Sbjct: 120 NFNPQSNMIVSGSFDETVRIWDV---TTGKCLKVLPAHSDPVTAVDFNRDGS--LIVSSS 174
Query: 223 RDLYLKIWDISNGWCIKSF----QPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGL 278
D +IWD G C+K+ P ++R +G+F+L G+ D+ +RL + S L
Sbjct: 175 YDGLCRIWDSGTGHCVKTLIDDENPPVSFVR-FSPNGKFILVGTLDNTLRLWNISSAKFL 233
Query: 279 SMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFI 333
GH + + + + + S S D + +W+++ K +
Sbjct: 234 KTYTGH----------VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
>YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 54.7 bits (130), Expect = 3e-07
Identities = 44/185 (23%), Positives = 87/185 (46%), Gaps = 12/185 (6%)
Query: 85 TNQISNASSDWCPRDTPSFQITLDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPL 144
T + + SD P + A T L H ++ +G G + +D+++
Sbjct: 56 TGDLVSKLSDGLPPGASDARGAKPAECTYLEAHKDTDLLAVGYADGVIKVWDLMS----- 110
Query: 145 QSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTV 204
++ + + +G + +I+L +G L + SKD N +W+L + L +++ H
Sbjct: 111 KTVLLNFNGHKA-AITLLQFDGTGTRLISGSKDSNIIVWDLVGEVGLYKLRS-----HKD 164
Query: 205 SDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSND 264
S F+ +G D L++T S+D +K+WD+ CI++ HT L V + ++T D
Sbjct: 165 SITGFWCQGEDWLIST-SKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDDLLITTGTD 223
Query: 265 SAIRL 269
S +++
Sbjct: 224 SQVKI 228
Score = 52.8 bits (125), Expect = 1e-06
Identities = 35/126 (27%), Positives = 60/126 (46%), Gaps = 12/126 (9%)
Query: 146 STMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVS 205
S H + SI IS ++ + T+S D N KIW L+ K+L H+ ++
Sbjct: 568 SLYGHKLPVLSIDISFDSK-----MIITSSADKNIKIWGLDFGDCH---KSLFAHQDSIM 619
Query: 206 DCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQ--WIRSLHVHGEFVLTGSN 263
+ +F + + +CS+D +K WD CI+ H W ++ G FV++ S+
Sbjct: 620 NVKFLPQSHNFF--SCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSH 677
Query: 264 DSAIRL 269
D +IR+
Sbjct: 678 DHSIRI 683
>CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 510
Score = 54.7 bits (130), Expect = 3e-07
Identities = 45/163 (27%), Positives = 72/163 (43%), Gaps = 21/163 (12%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSD----CQFFERGADLLLATCSRDL 225
YL + SKD ++W +K A + D C F R +++L AT S D
Sbjct: 228 YLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEML-ATGSIDG 286
Query: 226 YLKIWDISNGWCIKSF-QPHTQWIRSLHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGI 282
+K+W + G C++ F + HT+ + ++ +L+G ND +R+ SG L
Sbjct: 287 KIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMR 346
Query: 283 GHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
GH + V +Y G H+ S S DG+IR+W
Sbjct: 347 GHSSYITDV------------RYSDEG-NHIISCSTDGSIRVW 376
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 54.7 bits (130), Expect = 3e-07
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 146 STMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVS 205
S H GI S++ + +A + K+W+LE ++TL GH
Sbjct: 54 SLYGHSSGIDSVTF-----DASEVLVAAGAASGTIKLWDLE---EAKIVRTLTGHRSNCI 105
Query: 206 DCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTGSN 263
F G A+ S D LKIWDI CI +++ HT+ + L G +V++G
Sbjct: 106 SVDFHPFGE--FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGE 163
Query: 264 DSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIR 323
D+ +++ +G L+ H+ ++ + + P F +A+ S D T++
Sbjct: 164 DNIVKVWDLTAGKLLTEFKSHEGQIQSL------------DFHPHEFL-LATGSADRTVK 210
Query: 324 LW 325
W
Sbjct: 211 FW 212
>At2g47410 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1389
Score = 54.7 bits (130), Expect = 3e-07
Identities = 45/156 (28%), Positives = 68/156 (42%), Gaps = 22/156 (14%)
Query: 191 LSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRS 250
+ +IK L GH + V C F+R ++ T S D +KIW + C+ S + H I
Sbjct: 226 MQNIKKLRGHRNAVY-CAIFDRSGRYVI-TGSDDRLVKIWSMETALCLASCRGHEGDITD 283
Query: 251 LHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPL 308
L V + V + SND IR+ P G +S+ GH V +
Sbjct: 284 LAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAI----------------- 326
Query: 309 GFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLD 344
F ++S DGT R+W +++P R P+P D
Sbjct: 327 AFSPRQASSDDGTCRIWDARYSQWLP-RIYVPSPSD 361
>7292122 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1234
Score = 54.7 bits (130), Expect = 3e-07
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 41/236 (17%)
Query: 181 KIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKS 240
++W+ + + L H+ V F ++ L + D +K+W+ CI +
Sbjct: 34 QLWDYRMHTLLEKFDE---HDGPVRGVAFHQQMP--LFVSGGDDYKIKVWNYKQRRCIFT 88
Query: 241 FQPHTQWIRSLHVHGEF--VLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDP 298
H ++R++ H E+ +L+ S+D IR+ +W S N + + GH+ V
Sbjct: 89 LLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYV---------- 138
Query: 299 QHLQPQYQPLGFQHVASASRDGTIRLWKVS-LPKFIPHRPPRPNPLDTTFK--------- 348
+ Q+ P Q + SAS D T+R+W +S L K + P P LD K
Sbjct: 139 --MCAQFHPTEDQ-IVSASLDQTVRVWDISGLRK--KNVAPGPGGLDDHLKGHPGATDLF 193
Query: 349 ------VIAVLTDHNSWVR--DLRQFNDMLFSCSDDGSVKCWSL-DWTNLSTTTCK 395
V VL H+ V ++ S +DD VK W + ++ TC+
Sbjct: 194 GQADAVVKHVLEGHDRGVNWASFHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCR 249
>SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 796
Score = 54.3 bits (129), Expect = 4e-07
Identities = 37/163 (22%), Positives = 74/163 (44%), Gaps = 9/163 (5%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
I AL +HP+ P + D + ++ +Q+ H + S++I+ + N
Sbjct: 101 IRALVVHPTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNT---- 156
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
A++ D K+W S++++ TL H+ V+ ++ G L T D +K+W
Sbjct: 157 FASSCLDGTVKVWSF--GSSVANF-TLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVW 213
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEF--VLTGSNDSAIRLTH 271
D C++ + HT + H +F +++GS D +++ H
Sbjct: 214 DYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWH 256
>SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 314
Score = 54.3 bits (129), Expect = 4e-07
Identities = 56/283 (19%), Positives = 109/283 (37%), Gaps = 40/283 (14%)
Query: 108 DASITALCLHPSLPIIFIGLDSGKLLRYDI-LNVELPLQSTMAHMDGITSISISLPNENG 166
D+ + LC+ P + + + YDI + ++PL + H + +T+I+ +
Sbjct: 40 DSQVNRLCISPDKKFL-AAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGK-- 96
Query: 167 RPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLY 226
+LAT+S+D K+W++ S ++ H+ V+D +LL +C +
Sbjct: 97 ---WLATSSEDGTVKVWDMRAPS----VQRNYDHKSPVNDLLIHPNQGELL--SCDQSGR 147
Query: 227 LKIWDISNGWCIKSFQPHTQWIRS---LHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIG 283
++ WD+ C P S + G ++ G+N + + G S+
Sbjct: 148 VRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNCYVWRMLNHQGASL--- 204
Query: 284 HDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPL 343
++ V+ +++ +H+A+ S D T+ +W
Sbjct: 205 ----LQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTE--------------- 245
Query: 344 DTTFKVIAVLTDHNSWVRDLRQFND--MLFSCSDDGSVKCWSL 384
D +F + L H WV D D L + S D + W L
Sbjct: 246 DMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWEL 288
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 53.9 bits (128), Expect = 5e-07
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 25/182 (13%)
Query: 146 STMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVS 205
S H GI S++ + +A + K+W+LE ++TL GH
Sbjct: 147 SLYGHSSGIDSVTF-----DASEGLVAAGAASGTIKLWDLEEAKV---VRTLTGHRSNCV 198
Query: 206 DCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV--HGEFVLTGSN 263
F G A+ S D LKIWDI CI +++ HT+ + L G ++++G
Sbjct: 199 SVNFHPFGE--FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGE 256
Query: 264 DSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIR 323
D+ +++ +G L H+ ++ + + P F +A+ S D T++
Sbjct: 257 DNVVKVWDLTAGKLLHEFKSHEGKIQSL------------DFHPHEFL-LATGSADKTVK 303
Query: 324 LW 325
W
Sbjct: 304 FW 305
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 53.9 bits (128), Expect = 5e-07
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 35/242 (14%)
Query: 150 HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQF 209
H GI+ ++ S + Y + S D +IW+ S +K L GH + V C
Sbjct: 84 HSSGISDLAWSSDSH-----YTCSASDDCTLRIWDAR--SPYECLKVLRGHTNFVF-CVN 135
Query: 210 FERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAI 267
F ++L+++ S D ++IW++ G C++ + H+ I S+H + G +++ S+D +
Sbjct: 136 FNPPSNLIVSG-SFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSC 194
Query: 268 RLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKV 327
++ W + G + K LI P ++ P G + + A+ D T++L
Sbjct: 195 KI--WDAKEGTCL---------KTLIDDKSPAVSFAKFSPNG-KFILVATLDSTLKLSNY 242
Query: 328 SLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSLDWT 387
+ KF+ N + +V + S S+D V W L
Sbjct: 243 ATGKFLKVYTGHTNKVFCITSAFSVTN------------GKYIVSGSEDNCVYLWDLQAR 290
Query: 388 NL 389
N+
Sbjct: 291 NI 292
>7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 787
Score = 53.9 bits (128), Expect = 5e-07
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+AT S+D K+W E +TL + L GH V +F D ++ T S D L+IW
Sbjct: 493 IATASQDKTAKVWLAE-SNTLQGV--LRGHTRGVWSVRFSP--VDQIVLTSSSDCTLRIW 547
Query: 231 DISNGWCIKSFQPHTQWIRSLHV-HGEFVLTGSNDSAIRL 269
ISN CIK F +R+ + HG+F+++ ++D ++L
Sbjct: 548 SISNFSCIKRFDQECTILRAEFLDHGKFIISAASDGLLKL 587
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 53.9 bits (128), Expect = 5e-07
Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 37/214 (17%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
LA+ S D + +IW+++L L +I AGH + V+ ++ G L+ T S+D +K+W
Sbjct: 217 LASASGDGDCRIWDVKLGQCLMNI---AGHTNAVTAVRWGGAG---LIYTSSKDRTVKMW 270
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
++G ++F H W+ ++ + ++VL ++ S LS + +++
Sbjct: 271 RAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVK-DRSKSHLSLSTEELQESALKR 329
Query: 291 VLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVI 350
+ PD + + S S D T+ LW+ + K +
Sbjct: 330 YQAVCPDE-----------VESLVSCSDDNTLYLWR-----------------NNQNKCV 361
Query: 351 AVLTDHNSWVRDLRQFND--MLFSCSDDGSVKCW 382
+T H + V D++ D ++ S S D SV+ W
Sbjct: 362 ERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW 395
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 53.5 bits (127), Expect = 6e-07
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 144 LQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHT 203
+ + + H D + +IS G L + S D + +IW + L H++ GH
Sbjct: 500 VHTLIGHTDSVRTIS-------GYGDILVSGSYDSSIRIWRVSTGECLYHLR---GHSLR 549
Query: 204 VSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSN 263
+ +E ++ ++ S D +++WD+S G C + H ++ L+V +++GS
Sbjct: 550 IYSV-LYEPERNICISG-SMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSA 607
Query: 264 DSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIR 323
DS IR+ W G K L+++P + + +H + DG+++
Sbjct: 608 DSTIRI--WDLNTG------------KPLMVLPSNSGYISSF--VSDEHKIISGNDGSVK 651
Query: 324 LWKVSLPKFI 333
LW V K +
Sbjct: 652 LWDVRTGKLL 661
Score = 50.4 bits (119), Expect = 5e-06
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 71/305 (23%)
Query: 111 ITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRPAY 170
IT+L LH I G SG + ++ + L + H +G+ ++ I +EN
Sbjct: 354 ITSLLLHKDRIITTSG--SGTIQIHNAITGVLEARLE-GHKEGVWAVKI---HENT---- 403
Query: 171 LATTSKDLNTKIWELELDSTL----SHIKTLAGHEHTVSDCQFFERGADLL------LAT 220
L + S D ++W +E HI + E V + G +++ + +
Sbjct: 404 LVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPS-RLIRHGVEIVEPDQPYIVS 462
Query: 221 CSRDLYLKIWDI--------------------SNGWCIKSFQPHTQWIRSLHVHGEFVLT 260
SRD L++W + N + + + HT +R++ +G+ +++
Sbjct: 463 GSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGDILVS 522
Query: 261 GSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDG 320
GS DS+IR+ +G L GH + VL Y+P S S D
Sbjct: 523 GSYDSSIRIWRVSTGECLYHLRGHSLRIYSVL------------YEP-ERNICISGSMDK 569
Query: 321 TIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVK 380
+IR+W +S T VL H+++V L F + L S S D +++
Sbjct: 570 SIRVWDLS-----------------TGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIR 612
Query: 381 CWSLD 385
W L+
Sbjct: 613 IWDLN 617
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 53.5 bits (127), Expect = 6e-07
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 139 NVELPLQSTMA-HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTL 197
N E L T++ H ++ I S + YL T S D K+W +++++TL
Sbjct: 200 NGEFSLVKTISGHTKSVSVIKFSYCGK-----YLGTGSADKQIKVWNTV---DMTYLQTL 251
Query: 198 AGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWI--RSLHVHG 255
A H+ ++D + +A+ S D +KI+D+ +G C+++ + HT ++ S +
Sbjct: 252 ASHQLGINDFSWSSNSQ--FIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQS 309
Query: 256 EFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVAS 315
+ + D +R+ + +G + H P+ + Y G +A+
Sbjct: 310 SLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSI------------SYNHDG-NTMAT 356
Query: 316 ASRDGTIRLW 325
+S DG IR+W
Sbjct: 357 SSYDGCIRVW 366
>CE05533 [A] KOG0285 Pleiotropic regulator 1
Length = 494
Score = 53.5 bits (127), Expect = 6e-07
Identities = 39/180 (21%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 109 ASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRP 168
+S+ A+ + P P +F G + ++ +D L ++ H+ + ++S+ +
Sbjct: 227 SSVRAVKVSPRHPFLFSGGEDKQVKCWD-LEYNKVIRHYHGHLSAVQALSVHPSLD---- 281
Query: 169 AYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSD--CQFFERGADLLLATCSRDLY 226
L T ++D ++W++ T + + AGH +TV+D CQ D + T S D
Sbjct: 282 -VLVTCARDSTARVWDMR---TKAQVHCFAGHTNTVADVVCQ----SVDPQVITASHDAT 333
Query: 227 LKIWDISNGWCIKSFQPHTQWIRSLHVHGEF-VLTGSNDSAIRLTHWPSGNGLSMGIGHD 285
+++WD++ G + + H + +R+L +H + ++ I+ P G + GH+
Sbjct: 334 VRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHN 393
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 53.5 bits (127), Expect = 6e-07
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 181 KIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKS 240
K+W+LE ++ GH S +F G LA+ S D L++WD CI++
Sbjct: 32 KLWDLEESKM---VRAFTGHRSNCSAVEFHPFGE--FLASGSSDTNLRVWDTRKKGCIQT 86
Query: 241 FQPHTQWIRSLHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDP 298
++ HT+ I ++ G +V++G D+ +++ +G L H+ P+ +
Sbjct: 87 YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSL------- 139
Query: 299 QHLQPQYQPLGFQHVASASRDGTIRLW 325
+ PL F +A+ S D T++ W
Sbjct: 140 -----DFHPLEFL-LATGSADRTVKFW 160
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 53.5 bits (127), Expect = 6e-07
Identities = 61/256 (23%), Positives = 103/256 (39%), Gaps = 41/256 (16%)
Query: 175 SKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISN 234
S D+N ++ + D + ++L GH V C F LL +CS D +++W +
Sbjct: 427 SADINVRMLD---DRSGEVTRSLMGHTGPVYRCAFAPEMN--LLLSCSEDSTIRLWSLLT 481
Query: 235 GWCIKSFQPHTQ--WIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVL 292
C+ +++ H W HG + ++ S D RL S L + +GH V+ V
Sbjct: 482 WSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCV- 540
Query: 293 ILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAV 352
Q+ P +VA+ S D T+RLW + T + + +
Sbjct: 541 -----------QFHP-NSNYVATGSSDRTVRLWD-----------------NMTGQSVRL 571
Query: 353 LTDHNSWVRDL--RQFNDMLFSCSDDGSVKCWSLDWTNLSTTTCKKSWDLSNKGFQNCLT 410
+T H V L L S S D ++ W L +L TT + + ++ F T
Sbjct: 572 MTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGT 631
Query: 411 LDNIAFTGLPSRKLLF 426
+ +A GL + L+
Sbjct: 632 V--LAAAGLDNNLTLW 645
Score = 49.7 bits (117), Expect = 9e-06
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
L + S+D ++W L T S + T GH + V D +F G +CS D ++W
Sbjct: 465 LLSCSEDSTIRLWSL---LTWSCVVTYRGHVYPVWDVRFAPHG--YYFVSCSYDKTARLW 519
Query: 231 DISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPV 288
+ ++ F H + + H +V TGS+D +RL +G + + GH V
Sbjct: 520 ATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSV 579
Query: 289 EKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVS 328
+ + G +++AS S D I +W +S
Sbjct: 580 SSL------------AFSACG-RYLASGSVDHNIIIWDLS 606
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 53.5 bits (127), Expect = 6e-07
Identities = 60/298 (20%), Positives = 117/298 (39%), Gaps = 67/298 (22%)
Query: 150 HMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQF 209
H +G+ ++ + NG+ L + +D ++W DS+ +I+++ H V+D
Sbjct: 27 HRNGVNALQLDA--NNGK---LYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVL 81
Query: 210 FERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL------------------ 251
G +L+ A+C D +K+W+ G+C+ + + H ++++L
Sbjct: 82 CCNGRNLISASC--DTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAI 139
Query: 252 ---------------HVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIP 296
+ LTGS DS L PSG + G + ++ I
Sbjct: 140 FLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTEN------ILRIW 193
Query: 297 DPQHLQPQYQPLGF-------------QHVASASRDGTIRLWKVSLPKFIP----HRPPR 339
DP+ + + G V S S DGTI++W + + + H+
Sbjct: 194 DPRTCMRRMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGV 253
Query: 340 PNPL--DTTFKVIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKC--WSLDWTNLSTTT 393
+ L + +I+ D N V ++R ++ C + V +++D T + TT
Sbjct: 254 WSLLMSENFQYIISGSRDRNIIVTEMRNPSNKTLVCEEQAPVLSLGYNIDKTGVWATT 311
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 53.1 bits (126), Expect = 8e-07
Identities = 40/134 (29%), Positives = 64/134 (46%), Gaps = 11/134 (8%)
Query: 141 ELPLQSTM-AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHI--KTL 197
+L L++T+ H +TS+S + N P L + S+D + +W L D + + L
Sbjct: 4 QLVLRATLEGHSGWVTSLSTAPEN----PDILLSGSRDKSIILWNLVRDDVNYGVAQRRL 59
Query: 198 AGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV--HG 255
GH H VSDC L A S D +++WD+ G C F HT + S+ +
Sbjct: 60 TGHSHFVSDCALSFDSHYALSA--SWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDN 117
Query: 256 EFVLTGSNDSAIRL 269
V++GS D I++
Sbjct: 118 RQVVSGSRDKTIKI 131
>ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 423
Score = 53.1 bits (126), Expect = 8e-07
Identities = 45/168 (26%), Positives = 75/168 (43%), Gaps = 24/168 (14%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+A +S D KI+ + D L I+T GH+ V F D L + S D +IW
Sbjct: 128 VACSSDDQTIKIFGM--DGRL--IRTFVGHKGGVWTFMF----NDKYLVSGSTDKTARIW 179
Query: 231 DISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEK 290
D+ G + H +RSL ++ +++ TGS D+ IR+ ++ G L++ GH V
Sbjct: 180 DLWTGCTLCVLIGHKSVVRSLKIYDDYIATGSRDAEIRIWNF-RGTCLNVLKGHTMSV-- 236
Query: 291 VLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPP 338
+ +G ++ S S DG++ LW K + + P
Sbjct: 237 -------------RCMDMGESYLVSGSYDGSVALWDYRRGKLLRYLKP 271
Score = 53.1 bits (126), Expect = 8e-07
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
YL + S D +IW+L TL L GH+ V + + D +AT SRD ++I
Sbjct: 166 YLVSGSTDKTARIWDLWTGCTLC---VLIGHKSVVRSLKIY----DDYIATGSRDAEIRI 218
Query: 230 WDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVE 289
W+ G C+ + HT +R + + ++++GS D ++ L + G
Sbjct: 219 WNF-RGTCLNVLKGHTMSVRCMDMGESYLVSGSYDGSVALWDYRRGK------------- 264
Query: 290 KVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRL 324
L+ P L+ L +VAS S D ++ +
Sbjct: 265 --LLRYLKPHSLRVYSVSLSSSYVASGSLDSSVHV 297
>HsM6005894_2 [R] KOG4155 FOG: WD40 repeat
Length = 1191
Score = 53.1 bits (126), Expect = 8e-07
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 28/166 (16%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKT------LAGHEHTVSDCQFFERGADLLLATCSRD 224
LA+ S+D ++W +L + + L GHE VS C F G LAT RD
Sbjct: 589 LASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGPVSCCSFSTDGGS--LATGGRD 646
Query: 225 LYLKIWDI---SNGWCIKSFQP-HTQWIRS-LHVHGEFVLTGSNDSAIRLTHWPSGNGLS 279
L WD+ I SF H W+ +++ S+D ++ L SG L
Sbjct: 647 RSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDNLLISCSSDGSVGLWDPESGQRLG 706
Query: 280 MGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
+GH V V + +HV S SRDGT+++W
Sbjct: 707 QFLGHQSAVSAVAAV---------------EEHVVSVSRDGTLKVW 737
>Hs21536371_2 [R] KOG4155 FOG: WD40 repeat
Length = 1191
Score = 53.1 bits (126), Expect = 8e-07
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 28/166 (16%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKT------LAGHEHTVSDCQFFERGADLLLATCSRD 224
LA+ S+D ++W +L + + L GHE VS C F G LAT RD
Sbjct: 589 LASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGPVSCCSFSTDGGS--LATGGRD 646
Query: 225 LYLKIWDI---SNGWCIKSFQP-HTQWIRS-LHVHGEFVLTGSNDSAIRLTHWPSGNGLS 279
L WD+ I SF H W+ +++ S+D ++ L SG L
Sbjct: 647 RSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDNLLISCSSDGSVGLWDPESGQRLG 706
Query: 280 MGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
+GH V V + +HV S SRDGT+++W
Sbjct: 707 QFLGHQSAVSAVAAV---------------EEHVVSVSRDGTLKVW 737
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 52.4 bits (124), Expect = 1e-06
Identities = 47/160 (29%), Positives = 74/160 (45%), Gaps = 24/160 (15%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
Y + D ++W + L + AGH V+ C F ++ + AT S D +++
Sbjct: 599 YFVSGGHDRVARLWATDHYQPL---RIFAGHLADVN-CTRFHPNSNYV-ATGSADRTVRL 653
Query: 230 WDISNGWCIKSFQPHTQWIRSL--HVHGEFVLTGSNDSAIRLTHWPSGNGLSMG--IGHD 285
WD+ NG C++ F H I SL +G F+ TG+ D + L W G+GL +G GH
Sbjct: 654 WDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLL--WDIGHGLMVGELKGHT 711
Query: 286 FPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
V + ++ G + +AS S D T+RLW
Sbjct: 712 DTVCSL------------RFSRDG-EILASGSMDNTVRLW 738
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 52.4 bits (124), Expect = 1e-06
Identities = 31/101 (30%), Positives = 45/101 (43%), Gaps = 7/101 (6%)
Query: 173 TTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDI 232
T S D KIW + S L KT GH +V F G + +C D LK+W++
Sbjct: 558 TASGDKTVKIWAISDGSCL---KTFEGHTSSVLRASFITDGTQFV--SCGADGLLKLWNV 612
Query: 233 SNGWCIKSFQPHTQ--WIRSLHVHGEFVLTGSNDSAIRLTH 271
+ CI ++ H W ++ E + TG D+ I L H
Sbjct: 613 NTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWH 653
Score = 52.4 bits (124), Expect = 1e-06
Identities = 32/97 (32%), Positives = 50/97 (50%), Gaps = 10/97 (10%)
Query: 149 AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQ 208
AH I S++++ + + + T S+D IW L L H+ TL GH+ + +
Sbjct: 497 AHDKDINSVAVARND-----SLVCTGSEDRTASIWRLP---DLVHVVTLKGHKRRIFSVE 548
Query: 209 FFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHT 245
F D + T S D +KIW IS+G C+K+F+ HT
Sbjct: 549 FST--VDQCVMTASGDKTVKIWAISDGSCLKTFEGHT 583
Score = 50.4 bits (119), Expect = 5e-06
Identities = 37/143 (25%), Positives = 72/143 (49%), Gaps = 19/143 (13%)
Query: 136 DILNV----ELPLQSTM-AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDST 190
D++N+ + ++ST+ D +T++++S P++ L + ++W+LE T
Sbjct: 40 DVINIVDSTDSSVKSTIEGESDTLTALALS-PDDK----LLFSAGHSRQIRVWDLE---T 91
Query: 191 LSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRS 250
L I++ GHE V G LLAT D + +WD+ G+C F+ H + S
Sbjct: 92 LKCIRSWKGHEGPVMGMACHASGG--LLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSS 149
Query: 251 LHVHGE----FVLTGSNDSAIRL 269
+ H + +++GS+D+ +R+
Sbjct: 150 ILFHPDSNKNILISGSDDATVRV 172
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 52.4 bits (124), Expect = 1e-06
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 135 YDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHI 194
+D ++ L H D + +S + LAT S D ++W LE S L +
Sbjct: 305 WDTRKLDQELYLAARHSDEVLDVSFDAAGQ-----LLATCSSDCTARVWRLEGSSELEML 359
Query: 195 KTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRS--LH 252
+AGH VS F G +L T S D ++W +G C + H + S
Sbjct: 360 SLMAGHSDEVSKVCFSPSGC--MLLTASADNTARLWLTESGQCSQVLAGHEGEVFSCAYS 417
Query: 253 VHGEFVLTGSNDSAIR 268
G+ +LT S D++ R
Sbjct: 418 YAGDAILTASKDNSCR 433
>Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 513
Score = 52.0 bits (123), Expect = 2e-06
Identities = 42/165 (25%), Positives = 70/165 (41%), Gaps = 21/165 (12%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSD----CQFFERGADLLLATCSRDL 225
YL T S D ++W +K A + D C F R ++L AT ++D
Sbjct: 228 YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEML-ATGAQDG 286
Query: 226 YLKIWDISNGWCIKSFQ-PHTQWIRSLHVHGEF--VLTGSNDSAIRLTHWPSGNGLSMGI 282
+K+W I +G C++ F+ H++ + L + +L+ S D IR+ SG L
Sbjct: 287 KIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFR 346
Query: 283 GHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKV 327
GH V + ++ SAS DGT+++W +
Sbjct: 347 GHSSFVNEATFTQDG-------------HYIISASSDGTVKIWNM 378
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 51.6 bits (122), Expect = 2e-06
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 108 DASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGR 167
++ + HP+ ++ +G SG Y ELP TM + IT +I N
Sbjct: 254 NSKLRCAAFHPTSNLLVVGFSSGLFGIY-----ELP-SFTMLYQLSITQSNIDTLTVNST 307
Query: 168 PAYLATTSKDLNTK-IWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLY 226
++A S L +WE + +S ++ H +S Q+ G ++ T + D
Sbjct: 308 GDWIAIGSSKLGQLLVWEWQSES---YVLKQQSHYDALSTLQYSSDGQRII--TGADDGK 362
Query: 227 LKIWDISNGWCIKSFQPHTQWIRSL--HVHGEFVLTGSNDSAIR 268
+K+WD+++G+CI +F HT + L G + + S D ++R
Sbjct: 363 IKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVR 406
>Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 51.6 bits (122), Expect = 2e-06
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 107 LDASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENG 166
L +T LC P + +G + G + + +L+ E + H IT++ G
Sbjct: 64 LKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN-GHKAAITTLKYD--QLGG 120
Query: 167 RPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLY 226
R LA+ SKD + +W++ +S L +K GH+ ++ F LL T +D
Sbjct: 121 R---LASGSKDTDIIVWDVINESGLYRLK---GHKDAITQALFLREKN--LLVTSGKDTM 172
Query: 227 LKIWDISNGWCIKSFQPHTQ--WIRSLHVHGEFVLTGSNDSAIRL 269
+K WD+ C K+ H W L + ++TG++DS +R+
Sbjct: 173 VKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRV 217
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 51.6 bits (122), Expect = 2e-06
Identities = 61/249 (24%), Positives = 98/249 (38%), Gaps = 56/249 (22%)
Query: 196 TLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISN-----GWCIKSFQPHTQWIRS 250
TL GH V+ + D++L+ SRD + +W ++ G ++ + H+ ++
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSA-SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 251 LHVH--GEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPL 308
+ + G+F L+GS D +RL +G +GH V V + Q
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ--------- 119
Query: 309 GFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLR---- 364
+ S SRD TI+LW N L K H+ WV +R
Sbjct: 120 ----IVSGSRDKTIKLW---------------NTLGVC-KYTVQDESHSEWVSCVRFSPN 159
Query: 365 QFNDMLFSCSDDGSVKCWSLDWTNLSTTTCK-KSWDLSNKGFQNCLTLDNIAFTGLPSRK 423
N ++ SC D VK W+L CK K+ + + G+ N +T+ P
Sbjct: 160 SSNPIIVSCGWDKLVKVWNL-------ANCKLKTNHIGHTGYLNTVTVS-------PDGS 205
Query: 424 LLFSGSSEG 432
L SG +G
Sbjct: 206 LCASGGKDG 214
>Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 880
Score = 51.6 bits (122), Expect = 2e-06
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 217 LLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGN 276
L+ + S D +K W G C+++F H + + +L H + TGS D+ R SG
Sbjct: 500 LVYSGSADRTVKCWLADTGECVRTFTAHRRNVSALKYHAGTLFTGSGDACARAFDAQSGE 559
Query: 277 GLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHR 336
+ GH F + + + H Q Y +AS DG +RLW V + P
Sbjct: 560 LRRVFRGHTFIINCIQV------HGQVLY---------TASHDGALRLWDVRGLRGAPRP 604
Query: 337 PPRPNPLDTTF 347
PP L F
Sbjct: 605 PPPMRSLSRLF 615
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 51.2 bits (121), Expect = 3e-06
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 30/230 (13%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
YL T ++D K+W+L ST +GHE + F G + + S D ++
Sbjct: 374 YLVTGTEDRQIKLWDL---STQKVRYVFSGHEQDIYSLDFSHNGR--FIVSGSGDRTARL 428
Query: 230 WDISNGWCIKSFQ-PHTQWIRSLHVHGEFVLTGSNDSAIRLTHWP-SGNGLSMGIGHDFP 287
WD+ G CI + + ++ + +F+ GS D IR+ W SG + GH
Sbjct: 429 WDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRV--WSVSGTLVERLEGHKES 486
Query: 288 VEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTF 347
V + PD L S S D TI++W++ + + +P +
Sbjct: 487 VYSI-AFSPDSSIL------------LSGSLDKTIKVWELQATRSVGLSAIKPEGI---- 529
Query: 348 KVIAVLTDHNSWVRDLRQFNDMLF--SCSDDGSVKCWSLDWTNLSTTTCK 395
A T H +V + D + S S D S++ W L T S TC+
Sbjct: 530 -CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQ-TGQSYLTCQ 577
>ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 556
Score = 51.2 bits (121), Expect = 3e-06
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 109 ASITALCLHPSLPIIFIGLDSGKLLRYDILNVELPLQSTMAHMDGITSISISLPNENGRP 168
+ +TA+ HP+ +F G ++ +DI + ++ H D +T + +S +
Sbjct: 407 SDVTAVKFHPNSSYLFTGSSDHRVRMHDISTASV-VRIFCGHTDTVTCMDVSHCGK---- 461
Query: 169 AYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLK 228
+LA+ SKD +W+++ L GHE+TV F G+ +LA+C D ++
Sbjct: 462 -FLASGSKDRTVLLWDIQSSKLLG---KYVGHENTVFSVSFCFYGS--VLASCGADNSVR 515
Query: 229 IWDISN--GWCIKSF 241
+WD ++ G C+ ++
Sbjct: 516 LWDRTDHKGGCLGTY 530
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 51.2 bits (121), Expect = 3e-06
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 36/236 (15%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
+L T D K+W+L+ D+TL L GH V G +A+ S D + +
Sbjct: 54 FLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQ--TIASSSLDSTMCL 111
Query: 230 WDISNG--WCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFP 287
WD +G + SF P W ++V++G ND I + +G
Sbjct: 112 WDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGK----------- 160
Query: 288 VEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTF 347
E+ L L Y P G +++AS + DG I ++ V+
Sbjct: 161 AEQTLDAQNGKYTLSIAYSPDG-KYIASGAIDGIITIFDVA-----------------AG 202
Query: 348 KVIAVLTDHNSWVRDL--RQFNDMLFSCSDDGSVKCWSLDWTN-LSTTTCKKSWDL 400
KV+ L H VR L + +L + SDDG +K + + ++ + T + SW L
Sbjct: 203 KVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVL 258
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 51.2 bits (121), Expect = 3e-06
Identities = 58/255 (22%), Positives = 102/255 (39%), Gaps = 47/255 (18%)
Query: 135 YDILNVELPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHI 194
+D+ + +L L T H+ + +++S + YL + +D K W+LE + + H
Sbjct: 199 WDLASGKLKLSLT-GHVSTVRGVAVSTKHP-----YLFSCGEDRQVKCWDLEYNKVIRHY 252
Query: 195 KTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL--H 252
H H + +LAT RD +IWD+ + + HT + S+
Sbjct: 253 -----HGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQ 307
Query: 253 VHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQH 312
++TGS+DS +RL +G + H V ++ L P
Sbjct: 308 ATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIV--------LHP-----SLYM 354
Query: 313 VASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFND-MLF 371
ASAS D I+ W+ KF+ + ++ H S V + ++ +L
Sbjct: 355 FASASPD-NIKQWRCPEGKFVQN-----------------ISGHTSIVNCMAANSEGVLV 396
Query: 372 SCSDDGSVKCWSLDW 386
S D+G++ W DW
Sbjct: 397 SGGDNGTMFFW--DW 409
>YLR208w [U] KOG1332 Vesicle coat complex COPII subunit SEC13
Length = 297
Score = 50.8 bits (120), Expect = 4e-06
Identities = 59/229 (25%), Positives = 90/229 (38%), Gaps = 29/229 (12%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
LAT S D KI+E+E T I TL GHE V + +LA+CS D + IW
Sbjct: 24 LATCSSDKTIKIFEVE-GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82
Query: 231 DISNG-WC-IKSFQPHTQWIRSL----HVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGH 284
NG W I H+ + S+ H +G +L S+D + + + NG + I
Sbjct: 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE-NGTTSPIII 141
Query: 285 DFPVEKVLILIPDPQHLQPQYQPLGFQH---VASASRDGTIRLWKVSLPKFIPHRPPRPN 341
D V P ++ + G + + D +++WK N
Sbjct: 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY-------------N 188
Query: 342 PLDTTFKVIAVLTDHNSWVRDLR-----QFNDMLFSCSDDGSVKCWSLD 385
T+ + + L H+ WVRD+ L S S D + W+ D
Sbjct: 189 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237
>YJL112w [R] KOG4155 FOG: WD40 repeat
Length = 714
Score = 50.8 bits (120), Expect = 4e-06
Identities = 36/147 (24%), Positives = 68/147 (45%), Gaps = 26/147 (17%)
Query: 149 AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELE-------LDSTLSHIKTLAGHE 201
AH D +T++S+ P++L + S+D + W+L +D + +++ T + +
Sbjct: 500 AHTDEVTALSLD-------PSFLVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTSTNV 552
Query: 202 HTVSDCQFFERGA----------DLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL 251
+R D LAT ++D +++WD+ +G I++ + HT I SL
Sbjct: 553 DLSKSTLLTQRNERPSIGALQSFDAALATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSL 612
Query: 252 HVHGEFVLTGSNDSAIRLTHWPSGNGL 278
++TGS D +R+ W GL
Sbjct: 613 KFDSACLVTGSYDRTVRI--WDLRTGL 637
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 50.8 bits (120), Expect = 4e-06
Identities = 52/232 (22%), Positives = 93/232 (39%), Gaps = 35/232 (15%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
L + S+D++ + W+L + ++ GH + V D L A+ S D ++W
Sbjct: 357 LLSCSEDMSIRYWDL---GSFTNTVLYQGHAYPVWDLDISPYS--LYFASGSHDRTARLW 411
Query: 231 DISNGWCIKSFQPHTQWIRSL--HVHGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPV 288
+ ++ + H + + H + ++ TGS D +RL GN + + GH PV
Sbjct: 412 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPV 471
Query: 289 EKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFK 348
L + P G +++ASA D ++LW ++ T +K
Sbjct: 472 ------------LSLAFSPNG-KYLASAGEDQRLKLWDLA--------------SGTLYK 504
Query: 349 VIAVLTDHNSWVRDLRQFNDMLFSCSDDGSVKCWSLDWTNLSTTTCKKSWDL 400
+ TD N + ++ S S D SV+ W + T S S +L
Sbjct: 505 ELRGHTD-NITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSEL 555
Score = 50.1 bits (118), Expect = 7e-06
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 143 PLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEH 202
PL+ H+ + + PN N YLAT S D ++W + ++ ++ GH
Sbjct: 418 PLRIYAGHLADVDCVKFH-PNSN----YLATGSTDKTVRLWSAQQGNS---VRLFTGHRG 469
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGE--FVLT 260
V F G LA+ D LK+WD+++G K + HT I SL + + +
Sbjct: 470 PVLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIAS 527
Query: 261 GSNDSAIRL 269
S D+++R+
Sbjct: 528 ASMDNSVRV 536
>At3g18860 [I] KOG0301 Phospholipase A2-activating protein (contains WD40
repeats)
Length = 744
Score = 50.8 bits (120), Expect = 4e-06
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 218 LATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIRLTHWPSGNG 277
L + S D ++ +W++ NG I++ + H + + + E +++ S D ++ W +G
Sbjct: 70 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLK--RWRNGQL 127
Query: 278 LSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRP 337
+ H P++ V+ L P G + S S D +++LWK
Sbjct: 128 VESWDAHQSPIQAVIRL------------PSG--ELVSGSSDASLKLWKGKTS------- 166
Query: 338 PRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDMLF-SCSDDGSVKCWSL 384
+ L+ H VR L D+ F S S DGS++ W+L
Sbjct: 167 ------------LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWAL 202
>At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1216
Score = 50.8 bits (120), Expect = 4e-06
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 52/261 (19%)
Query: 167 RPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLY 226
RP LA+ + ++W+ + + + HE V F + L + D
Sbjct: 21 RPWILASLHSGV-IQLWDYRMGTLIDRFDE---HEGPVRGVHF--HNSQPLFVSGGDDYK 74
Query: 227 LKIWDISNGWCIKSFQPHTQWIRSLHVHGEF--VLTGSNDSAIRLTHWPSGNGLSMGIGH 284
+K+W+ N C+ + H +IR++ H E+ +++ S+D IR+ +W S +S+ GH
Sbjct: 75 IKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGH 134
Query: 285 DFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLD 344
+ V + + P V SAS D T+R+W + R +P D
Sbjct: 135 NHYV------------MCASFHPKE-DLVVSASLDQTVRVWDIG-----ALRKKTVSPAD 176
Query: 345 TTFKVIAVLTD----HNSWVRDLRQFND-------------MLFSCSDDGSVKCWSLDWT 387
++ + +D ++ V+ + + +D ++ S +DD VK W ++ T
Sbjct: 177 DIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
Query: 388 NLSTTTCKKSWDLSN-KGFQN 407
K+W++ +G N
Sbjct: 237 --------KAWEVDTLRGHMN 249
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 50.4 bits (119), Expect = 5e-06
Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 39/237 (16%)
Query: 151 MDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFF 210
++G ++ ++ N +AT S D K+W +E T T GH + F
Sbjct: 47 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE---TGKCYHTFRGHTAEIVCLSFN 103
Query: 211 ERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL--HVHGEFVLTGSNDSAIR 268
+ L+AT S D K+WDI NG + + + H+ I SL + G+ ++TGS D +
Sbjct: 104 PQST--LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV 161
Query: 269 LTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVS 328
+ W + G KV ILI + + + S D T +LW
Sbjct: 162 V--WDADTG-----------RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDA- 207
Query: 329 LPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRD--LRQFNDMLFSCSDDGSVKCWS 383
T K +A LT H+ + D ++ + S DG+ + +S
Sbjct: 208 ----------------TNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 248
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 50.4 bits (119), Expect = 5e-06
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 149 AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQ 208
AH D I S++ N+ + T S D K+W+ D L +L GH+ V
Sbjct: 14 AHDDAIWSVAWGT-NKKENSETVVTGSLDDLVKVWKWR-DERLDLQWSLEGHQLGVVSVD 71
Query: 209 FFERGADLLLATCSRDLYLKIWDISNGWCIKSFQ--PHTQWIRSLHVHGEFVLTGSNDSA 266
+ A+ S D ++++WD+ NG IKS P W + +++ TG++
Sbjct: 72 ISHTLP--IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK 129
Query: 267 IRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWK 326
+ + SG ++ ++ I L Y P G +++AS + DG I ++
Sbjct: 130 VNIFGVESGK-------KEYSLDTRGKFI-----LSIAYSPDG-KYLASGAIDGIINIFD 176
Query: 327 VSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFND--MLFSCSDDGSVKCWSL 384
++ T K++ L H +R L D +L + SDDG +K + +
Sbjct: 177 IA-----------------TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 385 DWTNLS-TTTCKKSWDLS 401
NL+ T + SW L+
Sbjct: 220 QHANLAGTLSGHASWVLN 237
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 50.4 bits (119), Expect = 5e-06
Identities = 58/254 (22%), Positives = 93/254 (35%), Gaps = 61/254 (24%)
Query: 196 TLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISN---------GWCIKSFQPHTQ 246
TL GH V+ + R + + SRD + +WD+ + G ++S H
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNH 70
Query: 247 WIRSLHV--HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQ 304
++ + + G+F L+GS D +RL G I H V V + Q
Sbjct: 71 FVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQ----- 125
Query: 305 YQPLGFQHVASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTD--HNSWVRD 362
+ S SRD +I+LW +T + +TD H WV
Sbjct: 126 --------IVSGSRDKSIKLW------------------NTLAQCKYTITDDCHTDWVST 159
Query: 363 LR----QFNDMLFSCSDDGSVKCWSLDWTNLSTTTCKKSWDLSNKGFQNCLTLDNIAFTG 418
+R + ++ S D VK W+L L T + + G+ N +T+
Sbjct: 160 VRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTN------HIGHTGYVNTVTVS------ 207
Query: 419 LPSRKLLFSGSSEG 432
P L SG +G
Sbjct: 208 -PDGSLCASGGKDG 220
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 50.4 bits (119), Expect = 5e-06
Identities = 46/192 (23%), Positives = 82/192 (41%), Gaps = 20/192 (10%)
Query: 142 LPLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSH---IKTLA 198
L L+ T+ +G + + P + P + + S+D +W+L D ++ K L
Sbjct: 5 LQLRGTLIGHNGWVTQIATNPKD---PDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLY 61
Query: 199 GHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSL--HVHGE 256
GH H +SD G L S D L++WD++ G + F+ HT+ + S+
Sbjct: 62 GHSHFISDVVLSSDGNYALSG--SWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNR 119
Query: 257 FVLTGSNDSAIRLTHWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASA 316
+++GS D I+L W + I D + V + P H P + S
Sbjct: 120 QIVSGSRDKTIKL--WNTLAECKFTIQEDGHTDWVSCVRFSPNHSNP--------IIVSC 169
Query: 317 SRDGTIRLWKVS 328
D T+++W ++
Sbjct: 170 GWDRTVKVWNLA 181
>Hs7108333_2 [R] KOG4155 FOG: WD40 repeat
Length = 668
Score = 50.4 bits (119), Expect = 5e-06
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+A+ D ++++ E L IK HE V C F D +ATCS D +KIW
Sbjct: 50 IASCGADKTLQVFKAETGEKLLEIKA---HEDEVLCCAFSTD--DRFIATCSVDKKVKIW 104
Query: 231 DISNGWCIKSFQPHTQWIRSLHV----HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDF 286
+ G + ++ H++ + H H + TGS+D ++L + GH
Sbjct: 105 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTN 164
Query: 287 PVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
V PD + L AS S DGT++LW
Sbjct: 165 SVNHCRFS-PDDKLL------------ASCSADGTLKLW 190
Score = 50.1 bits (118), Expect = 7e-06
Identities = 40/151 (26%), Positives = 60/151 (39%), Gaps = 11/151 (7%)
Query: 149 AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQ 208
AH D + + S + ++AT S D KIW T + T H V+ C
Sbjct: 75 AHEDEVLCCAFSTDDR-----FIATCSVDKKVKIWN---SMTGELVHTYDEHSEQVNCCH 126
Query: 209 FFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIR 268
F LLLAT S D +LK+WD++ C + HT + + L S +
Sbjct: 127 FTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT 186
Query: 269 LTHWPSGNGLSMGIGHDFPVEKVLILIPDPQ 299
L W + S V++ + + DPQ
Sbjct: 187 LKLW---DATSANERKSINVKQFFLNLEDPQ 214
>Hs4502123_2 [R] KOG4155 FOG: WD40 repeat
Length = 625
Score = 50.4 bits (119), Expect = 5e-06
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 171 LATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKIW 230
+A+ D ++++ E L IK HE V C F D +ATCS D +KIW
Sbjct: 50 IASCGADKTLQVFKAETGEKLLEIKA---HEDEVLCCAFSTD--DRFIATCSVDKKVKIW 104
Query: 231 DISNGWCIKSFQPHTQWIRSLHV----HGEFVLTGSNDSAIRLTHWPSGNGLSMGIGHDF 286
+ G + ++ H++ + H H + TGS+D ++L + GH
Sbjct: 105 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTN 164
Query: 287 PVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLW 325
V PD + L AS S DGT++LW
Sbjct: 165 SVNHCRFS-PDDKLL------------ASCSADGTLKLW 190
Score = 50.1 bits (118), Expect = 7e-06
Identities = 40/151 (26%), Positives = 60/151 (39%), Gaps = 11/151 (7%)
Query: 149 AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQ 208
AH D + + S + ++AT S D KIW T + T H V+ C
Sbjct: 75 AHEDEVLCCAFSTDDR-----FIATCSVDKKVKIWN---SMTGELVHTYDEHSEQVNCCH 126
Query: 209 FFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVHGEFVLTGSNDSAIR 268
F LLLAT S D +LK+WD++ C + HT + + L S +
Sbjct: 127 FTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT 186
Query: 269 LTHWPSGNGLSMGIGHDFPVEKVLILIPDPQ 299
L W + S V++ + + DPQ
Sbjct: 187 LKLW---DATSANERKSINVKQFFLNLEDPQ 214
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 50.1 bits (118), Expect = 7e-06
Identities = 57/229 (24%), Positives = 85/229 (36%), Gaps = 52/229 (22%)
Query: 217 LLATCSRDLYLKIW-----DISNGWCIKSFQPHTQWIRS--LHVHGEFVLTGSNDSAIRL 269
++ T SRD + +W D S G + H+ +++ L G+F L+GS D +RL
Sbjct: 30 VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRL 89
Query: 270 THWPSGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKVSL 329
+G +GH V V + Q + SASRD TI+LW
Sbjct: 90 WDLATGESTRRFVGHTKDVLSVAFSTDNRQ-------------IVSASRDRTIKLW---- 132
Query: 330 PKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFNDML----FSCSDDGSVKCWSLD 385
N L I+ H WV +R + L S S D +VK W+L
Sbjct: 133 -----------NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 386 WTNLSTTTCKKSWDLSNKGFQNCLTLDNIAFTGLPSRKLLFSGSSEGTL 434
L T + G+ N + + P L SG +G +
Sbjct: 182 NCKLRNTLA------GHSGYLNTVAVS-------PDGSLCASGGKDGVI 217
>YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 889
Score = 49.7 bits (117), Expect = 9e-06
Identities = 71/311 (22%), Positives = 125/311 (39%), Gaps = 70/311 (22%)
Query: 170 YLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQFFERGADLLLATCSRDLYLKI 229
++ TT ++W E T ++++ E V +F R +++ S D +++
Sbjct: 27 WVLTTLYSGRVELWNYE---TQVEVRSIQVTETPVRAGKFIARKNWIIVG--SDDFRIRV 81
Query: 230 WDISNGWCIKSFQPHTQWIRSLHVHGE--FVLTGSNDSAIRLTHWPSGNGLSMGI-GHDF 286
++ + G + F+ H +IRS+ VH +VL+GS+D ++L +W + L GH+
Sbjct: 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH 141
Query: 287 PVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIRLWKV--SLPKF------------ 332
V V DP AS D T+++W + S P F
Sbjct: 142 FVMCVAFNPKDPSTF------------ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNY 189
Query: 333 IPHRPPRPNPL------DTTFKV--------IAVLTDHNSWVRDLRQFN---DMLFSCSD 375
+ + P P D T K+ +A L H S V F+ ++ S S+
Sbjct: 190 VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV-SFAVFHPTLPIIISGSE 248
Query: 376 DGSVKCWSLDWTNLSTTT---CKKSWDLSN----------KGFQNCLTL-----DNIAFT 417
DG++K W+ + T ++SW ++ GF N T+ D +
Sbjct: 249 DGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLS 308
Query: 418 GLPSRKLLFSG 428
P KL++SG
Sbjct: 309 LDPVGKLVWSG 319
>YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 779
Score = 49.7 bits (117), Expect = 9e-06
Identities = 70/311 (22%), Positives = 129/311 (40%), Gaps = 45/311 (14%)
Query: 142 LPLQSTM-AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGH 200
+P ++T+ HM TS+ L E+ Y+ T + D ++++ + L+GH
Sbjct: 371 VPQRTTLRGHM---TSVITCLQFEDN---YVITGADDKMIRVYD---SINKKFLLQLSGH 421
Query: 201 EHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHV----HGE 256
+ V ++ G +L + S D +++WDI G C F+ H +R L + + +
Sbjct: 422 DGGVWALKYAHGG---ILVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCLDIVEYKNIK 478
Query: 257 FVLTGSNDSAIRLTHWPSGNGL-SMGIGHDFPV------EKVLILIPDPQHLQPQYQPLG 309
+++TGS D+ + + P + + G HD+P+ E + H+ G
Sbjct: 479 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG 538
Query: 310 FQH-VASASRDGTIRLWKVSLPKFIPHRPPRPNPLDTTFKVIAVLTDHNSWVRDLRQFND 368
+ V S S D T+ +W V+ K + T ++ + + DH
Sbjct: 539 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGH------TDRIYSTIYDHE---------RK 583
Query: 369 MLFSCSDDGSVKCWSLD--WTNLSTTTCKKSWDLSNKGFQNCLTLD-NIAFTGL--PSRK 423
S S D +++ W L+ W N + S K TL + A GL S K
Sbjct: 584 RCISASMDTTIRIWDLENIWNNGECSYATNSASPCAKILGAMYTLQGHTALVGLLRLSDK 643
Query: 424 LLFSGSSEGTL 434
L S +++G++
Sbjct: 644 FLVSAAADGSI 654
>CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 793
Score = 49.7 bits (117), Expect = 9e-06
Identities = 34/107 (31%), Positives = 54/107 (49%), Gaps = 9/107 (8%)
Query: 141 ELPLQSTM-AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDST-LSHIKTLA 198
+L STM AH + + IS + A +AT D K+W+++ L TL+
Sbjct: 466 KLTCSSTMVAHGKDVNCVDISESD-----ALIATGGMDKLVKLWQVDTHKMQLGIAGTLS 520
Query: 199 GHEHTVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHT 245
GH V D +F + L A+CS D+ +KIW+IS C+++ H+
Sbjct: 521 GHRRGVGDVKFAKNSHKL--ASCSGDMTIKIWNISEKSCLQTISGHS 565
>At3g18140 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 305
Score = 49.7 bits (117), Expect = 9e-06
Identities = 34/102 (33%), Positives = 45/102 (43%), Gaps = 10/102 (9%)
Query: 143 PLQSTMAHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEH 202
PL AH I +S N+ YLAT S D KIW ++ K L GH+
Sbjct: 203 PLHKLQAHNGHILKCLLSPANK-----YLATASSDKTVKIWNVD---GFKLEKVLTGHQR 254
Query: 203 TVSDCQFFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPH 244
V DC F G L T S D+ ++W + G +K +Q H
Sbjct: 255 WVWDCVFSVDGE--FLVTASSDMTARLWSMPAGKEVKVYQGH 294
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 49.7 bits (117), Expect = 9e-06
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 30/190 (15%)
Query: 149 AHMDGITSISISLPNENGRPAYLATTSKDLNTKIWELELDSTLSHIKTLAGHEHTVSDCQ 208
AH +TS+ + E GR L T +D N +W + + +L GH ++ DC
Sbjct: 16 AHDSRVTSLDLG---ETGR--VLVTGGEDRNVNLWAIGQNECFM---SLTGHNRSI-DCV 66
Query: 209 FFERGADLLLATCSRDLYLKIWDISNGWCIKSFQPHTQWIRSLHVH--GEFVLTGSNDSA 266
F + + + + ++ WD+++ + H + +R+L + GE+V++GSND+
Sbjct: 67 RFAYKDNFVYSADDIGI-IRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTT 125
Query: 267 IRLTHWP---SGNGLSMGIGHDFPVEKVLILIPDPQHLQPQYQPLGFQHVASASRDGTIR 323
+RL W N + + GH V V ++ P G +ASA +G+I
Sbjct: 126 VRL--WDVQNENNCIKVCRGHMSHVNSV------------KFSPDGL-WIASAGLEGSIL 170
Query: 324 LWKVSLPKFI 333
+W + K I
Sbjct: 171 IWDIRKSKQI 180
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,915,309
Number of Sequences: 60738
Number of extensions: 1332451
Number of successful extensions: 6847
Number of sequences better than 1.0e-05: 117
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 5925
Number of HSP's gapped (non-prelim): 488
length of query: 439
length of database: 30,389,216
effective HSP length: 109
effective length of query: 330
effective length of database: 23,768,774
effective search space: 7843695420
effective search space used: 7843695420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)