ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII1960 good U KOG0864 Intracellular trafficking, secretion, and vesicular transport Ran-binding protein RANBP1 and related RanBD domain proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII1960 699907 698870 -346
(346 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YIL063c [U] KOG0864 Ran-binding protein RANBP1 and related RanBD... 175 1e-43
Hs6466466 [U] KOG0866 Ran-binding protein RANBP3 69 8e-12
Hs4506409 [U] KOG0866 Ran-binding protein RANBP3 69 8e-12
Hs6466462 [U] KOG0866 Ran-binding protein RANBP3 69 1e-11
YDR002w [U] KOG0864 Ran-binding protein RANBP1 and related RanBD... 64 4e-10
SPCC18B5.07c [U] KOG0866 Ran-binding protein RANBP3 63 7e-10
SPBC365.13c_2 [U] KOG0864 Ran-binding protein RANBP1 and related... 60 4e-09
SPBC1773.07c [U] KOG0864 Ran-binding protein RANBP1 and related ... 60 5e-09
At2g30060 [U] KOG0864 Ran-binding protein RANBP1 and related Ran... 59 1e-08
Hs6382079_1 [U] KOG0864 Ran-binding protein RANBP1 and related R... 59 1e-08
At1g07140 [U] KOG0864 Ran-binding protein RANBP1 and related Ran... 57 4e-08
7301301 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD... 57 5e-08
CE17939 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD... 55 2e-07
At1g52380 [U] KOG0864 Ran-binding protein RANBP1 and related Ran... 54 4e-07
Hs4506407 [U] KOG0864 Ran-binding protein RANBP1 and related Ran... 53 7e-07
Hs19718755 [U] KOG0864 Ran-binding protein RANBP1 and related Ra... 53 7e-07
Hs22041001 [U] KOG0864 Ran-binding protein RANBP1 and related Ra... 52 1e-06
At3g15970 [U] KOG0864 Ran-binding protein RANBP1 and related Ran... 51 3e-06
>YIL063c [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 327
Score = 175 bits (443), Expect = 1e-43
Identities = 100/220 (45%), Positives = 129/220 (58%), Gaps = 23/220 (10%)
Query: 139 FGAANAFSAGLPAAKTTEKDGNK--DTVKVEPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
FGAA+ F G AK KDG+ T +
Sbjct: 100 FGAASKFGTGFGVAKKDTKDGDATTSTESLPASDSKTKKPFAFGSGLSFGSGFNILKNKT 159
Query: 197 XQTVESEKKE------------------STPAQSREPTVKLTKQDVKSGEETEESIFQTN 238
ESEKK S + + +KL KQ+VKSGEE+EE I+Q N
Sbjct: 160 ENNSESEKKATDVDKDKVHSGSEQLANASEDTKDKPKPLKLQKQEVKSGEESEECIYQVN 219
Query: 239 AKLYQLTDIKDGWKERGIGVLHLNK--DEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKK 296
AKLYQL++IK+GWKERG+G++ +NK D+V EK+RIVMRSRG+LKVILN+ LVKGF+++K
Sbjct: 220 AKLYQLSNIKEGWKERGVGIIKINKSKDDV-EKTRIVMRSRGILKVILNIQLVKGFTVQK 278
Query: 297 GFPGSLNGEKFVRILAVDENKNPVQYALRTGKAEIADELY 336
GF GSL EKF+R+LAVD+N +P QYA++TGK E DELY
Sbjct: 279 GFTGSLQSEKFIRLLAVDDNGDPAQYAIKTGKKETTDELY 318
>Hs6466466 [U] KOG0866 Ran-binding protein RANBP3
Length = 567
Score = 69.3 bits (168), Expect = 8e-12
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 201 ESEKKESTP-----AQSREPTVKLT-------KQDVKSGEETEESIFQTNAKLYQLTDIK 248
ES +E+TP A+S K T K +V +GEE E ++ Q KL+
Sbjct: 356 ESSSQEATPEKESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTS 415
Query: 249 DGWKERGIGVLHLN----KDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNG 304
W ERG G+L LN D+ + +SR+VMR++G L++ILN L I K
Sbjct: 416 QSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKA------S 469
Query: 305 EKFVRILAVDENKNPVQYALRTGKAEIADELYEKVNAHIL 344
EK +RI A+D V+ L + ++ +LY ++ IL
Sbjct: 470 EKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRIL 509
>Hs4506409 [U] KOG0866 Ran-binding protein RANBP3
Length = 562
Score = 69.3 bits (168), Expect = 8e-12
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 201 ESEKKESTP-----AQSREPTVKLT-------KQDVKSGEETEESIFQTNAKLYQLTDIK 248
ES +E+TP A+S K T K +V +GEE E ++ Q KL+
Sbjct: 351 ESSSQEATPEKGSLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTS 410
Query: 249 DGWKERGIGVLHLN----KDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNG 304
W ERG G+L LN D+ + +SR+VMR++G L++ILN L I K
Sbjct: 411 QSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKA------S 464
Query: 305 EKFVRILAVDENKNPVQYALRTGKAEIADELYEKVNAHIL 344
EK +RI A+D V+ L + ++ +LY ++ IL
Sbjct: 465 EKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRIL 504
>Hs6466462 [U] KOG0866 Ran-binding protein RANBP3
Length = 499
Score = 68.6 bits (166), Expect = 1e-11
Identities = 49/153 (32%), Positives = 75/153 (48%), Gaps = 13/153 (8%)
Query: 199 TVESEKKESTPAQSREPTVK---LTKQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERG 255
T E E + A + T + L K +V +GEE E ++ Q KL+ W ERG
Sbjct: 295 TPEKESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERG 354
Query: 256 IGVLHLN----KDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRIL 311
G+L LN D+ + +SR+VMR++G L++ILN L I K EK +RI
Sbjct: 355 RGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKA------SEKSIRIT 408
Query: 312 AVDENKNPVQYALRTGKAEIADELYEKVNAHIL 344
A+D V+ L + ++ +LY ++ IL
Sbjct: 409 AMDTEDQGVKVFLISASSKDTGQLYAALHHRIL 441
>YDR002w [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 201
Score = 63.5 bits (153), Expect = 4e-10
Identities = 47/148 (31%), Positives = 70/148 (46%), Gaps = 11/148 (7%)
Query: 199 TVESEKKESTPAQSR-----EPTVKLTKQDVKSGEETEESIFQTNAKLYQLTDIKDGWKE 253
T E KKE A EP V L K DVK+ EE EE +++ AKL++ WKE
Sbjct: 46 TKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKE 105
Query: 254 RGIGVLHLNKDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAV 313
RG G K++ + K RI+MR LK+ N + +++K P + +V
Sbjct: 106 RGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLK---PNVGSDRSWVYACTA 162
Query: 314 DENKNPVQ---YALRTGKAEIADELYEK 338
D + + +A+R G E AD+ E+
Sbjct: 163 DIAEGEAEAFTFAIRFGSKENADKFKEE 190
>SPCC18B5.07c [U] KOG0866 Ran-binding protein RANBP3
Length = 565
Score = 62.8 bits (151), Expect = 7e-10
Identities = 42/141 (29%), Positives = 75/141 (52%), Gaps = 9/141 (6%)
Query: 201 ESEKKESTPAQSREPTVKLTKQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLH 260
E E+KE+ ++R ++ + GEE E+S+F+T AK+Y+ + + GIG L
Sbjct: 424 EQEEKENGNDETRSNDSLVSGKG--KGEENEDSVFETRAKIYRFDATSKSYSDIGIGPLK 481
Query: 261 LNKDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAVD-ENKNP 319
+N D + +RI+ R G K++LN+ L + F SL G+K V++ A + K+
Sbjct: 482 INVDRDTGSARILARVEGSGKLLLNVRLCQDFEY------SLAGKKDVKVPAASTDGKSI 535
Query: 320 VQYALRTGKAEIADELYEKVN 340
Y +R + A++L ++N
Sbjct: 536 EMYLIRVKEPSTAEKLLAELN 556
>SPBC365.13c_2 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 121
Score = 60.5 bits (145), Expect = 4e-09
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 235 FQTNAKLYQLTDIKDGWKERGIGVLHLN--KDEVSEKSRIVMRSRGLLKVILNLPLVKGF 292
F A+LY + D K WKERG G+L +N K S R++MR+ + +VI+N+PL +G
Sbjct: 1 FSVRARLYVVADEKKTWKERGQGILKVNVPKQRGSGSGRLLMRNDAVHRVIMNVPLFQGM 60
Query: 293 SIKK---GFPGSLNGEKFVRILAVDENKNPVQYALRTGKAEIADELYEKVNAHILE 345
S K S +++I + EN V YA+R +A++L H+LE
Sbjct: 61 SKKSLQIASASSGGSANYLKIFVI-ENGKSVLYAVRVKDNSLAEQL----RNHVLE 111
>SPBC1773.07c [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 215
Score = 60.1 bits (144), Expect = 5e-09
Identities = 46/154 (29%), Positives = 75/154 (47%), Gaps = 12/154 (7%)
Query: 201 ESEKKESTPAQSREPTVKLTKQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLH 260
+ + + ++P EP VKL+ + K+ EE E F+ AKL++ WKERG G
Sbjct: 63 DEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDAR 122
Query: 261 LNKDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAVDENK--- 317
L K + + K+R+VMR LKV N L+ + P + +V +A D ++
Sbjct: 123 LLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLT---PNVGSDRSWVWTVAADVSEGEP 179
Query: 318 NPVQYALRTGKAEIAD------ELYEKVNAHILE 345
+A+R +E A+ E Y++ NA IL+
Sbjct: 180 TAETFAIRFANSENANLFKENFEKYQEENAKILK 213
>At2g30060 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 217
Score = 58.9 bits (141), Expect = 1e-08
Identities = 35/95 (36%), Positives = 51/95 (52%), Gaps = 1/95 (1%)
Query: 202 SEKKESTPAQSREPTVKLTKQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHL 261
+ + E T AQ P V+L + V +GEE E++I +KLY+ WKERG G +
Sbjct: 20 ANEDEDTGAQVA-PIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKF 78
Query: 262 NKDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKK 296
K VS K R+VMR LK+ N + G S+++
Sbjct: 79 LKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQE 113
>Hs6382079_1 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 3065
Score = 58.9 bits (141), Expect = 1e-08
Identities = 41/122 (33%), Positives = 60/122 (48%), Gaps = 5/122 (4%)
Query: 214 EPTVKLTKQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLNKDEVSEKSRIV 273
EP V L + +VKSGEE EE +F+ AKLY+ WKERG+G + + + RI+
Sbjct: 2913 EPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTMKNYYRIL 2972
Query: 274 MRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILA--VDENKNPVQYALRTGKAEI 331
MR + KV N + K +K P +++ V + D Q A+R E+
Sbjct: 2973 MRRDQVFKVCANHVITKTMELK---PLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEV 3029
Query: 332 AD 333
AD
Sbjct: 3030 AD 3031
Score = 56.2 bits (134), Expect = 7e-08
Identities = 40/115 (34%), Positives = 58/115 (49%), Gaps = 6/115 (5%)
Query: 214 EPTVKLT-KQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLNKDEVSEKSRI 272
EP V L K +VK+GEE EE F AKL++ WKERGIG + + + + S K R+
Sbjct: 1173 EPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRL 1232
Query: 273 VMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFV--RILAVDENKNPVQYALR 325
+MR +LK+ N + + P + + FV + DE P Q A+R
Sbjct: 1233 LMRREQVLKICANHYISPDMKLT---PNAGSDRSFVWHALDYADELPKPEQLAIR 1284
Score = 54.7 bits (130), Expect = 2e-07
Identities = 40/139 (28%), Positives = 70/139 (49%), Gaps = 2/139 (1%)
Query: 201 ESEKKESTPAQSREPTVKLT-KQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVL 259
++ K E + EP V++ K ++ +GEE E+ ++ KL++ WKERG+G L
Sbjct: 2001 DAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNL 2060
Query: 260 HLNKDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAVDENKNP 319
+ K+EV+ K R++MR +LKV N + ++K GS ++ D +
Sbjct: 2061 KILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKP-LSGSDRAWMWLASDFSDGDAKL 2119
Query: 320 VQYALRTGKAEIADELYEK 338
Q A + E+A+E +K
Sbjct: 2120 EQLAAKFKTPELAEEFKQK 2138
Score = 53.1 bits (126), Expect = 6e-07
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 204 KKESTPAQSREPTVKLTKQ-DVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLN 262
++E Q EP V L +V SGEE E+ +F AKLY+ WKERGIG + +
Sbjct: 2301 QEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKIL 2360
Query: 263 KDEVSEKSRIVMRSRGLLKVILN 285
++ +++ RIVMR +LK+ N
Sbjct: 2361 QNYDNKQVRIVMRRDQVLKLCAN 2383
>At1g07140 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 228
Score = 57.0 bits (136), Expect = 4e-08
Identities = 40/135 (29%), Positives = 64/135 (46%), Gaps = 16/135 (11%)
Query: 202 SEKKESTPAQSREPTVKLTKQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHL 261
+ + E T AQ P V+L + V +GEE E+++ +KLY+ + WKERG G +
Sbjct: 18 ANEDEDTGAQVA-PIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKF 76
Query: 262 NKDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAVDENKNPVQ 321
K + + K R+VMR LK+ N + G S+++ V K+ V
Sbjct: 77 LKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQE---------------HVGNEKSCVW 121
Query: 322 YALRTGKAEIADELY 336
+A E+ DEL+
Sbjct: 122 HARDFADGELKDELF 136
>7301301 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 2659
Score = 56.6 bits (135), Expect = 5e-08
Identities = 34/92 (36%), Positives = 51/92 (54%), Gaps = 9/92 (9%)
Query: 201 ESEKKESTPAQSRE------PTVKLT-KQDVKSGEETEESIFQTNAKLYQLTDIKDGWKE 253
E E +S + E P + L K DVK+GEE EE ++ AKLY+L + WKE
Sbjct: 1966 EDEDNDSQEVEEEENNTYFSPVIPLPDKIDVKTGEEDEELLYVHKAKLYRLNE--SDWKE 2023
Query: 254 RGIGVLHLNKDEVSEKSRIVMRSRGLLKVILN 285
RG+G + + + ++K R+VMR + K+ LN
Sbjct: 2024 RGLGDVKILRHRQTKKLRVVMRREQVFKICLN 2055
Score = 49.7 bits (117), Expect = 6e-06
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 224 VKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLNKDEVSEKSRIVMRSRGLLKVI 283
V +GEE E +F AKLY+ WKERG+G + + + + R++MR + K++
Sbjct: 2510 VTTGEENETKLFGERAKLYRYDAESKQWKERGVGEIKVLEHPELQTFRLIMRQEQIHKLV 2569
Query: 284 LNLPL------------VKGFSIKKGFPGSLNGEKFVRILAVDENKNPVQYALRTGKAEI 331
LN+ + +K F + G+ +++ E V V E + A R K EI
Sbjct: 2570 LNMNISASLQMDYMNAQMKSF-LWAGYNYAVDAEGKVDTEGVLE-----RLACRFAKEEI 2623
Query: 332 ADELYEKVNAHI 343
A E VN+ I
Sbjct: 2624 ASEFLNTVNSCI 2635
>CE17939 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 860
Score = 55.1 bits (131), Expect = 2e-07
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 201 ESEKKESTPAQSREPTVKLTKQ-DVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVL 259
E ++ P +P + L +VK+GEE E+++F +KLY + WKERG G L
Sbjct: 243 EEHDEDYEPEGEFKPVIPLPDLVEVKTGEEGEQTMFCNRSKLYIYANETKEWKERGTGEL 302
Query: 260 HLNKDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAVDENKNP 319
+ ++ + R+VMR +LKV N P++ +I++ F + D+ +
Sbjct: 303 KVLYNKDKKSWRVVMRRDQVLKVCANFPILGSMTIQQMKSNEKAYTWFCEDFSEDQPAH- 361
Query: 320 VQYALRTGKAEIADE---LYEKVNA 341
V+ + R +IA E L+EK A
Sbjct: 362 VKLSARFANVDIAGEFKTLFEKAVA 386
>At1g52380 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 440
Score = 53.5 bits (127), Expect = 4e-07
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 221 KQDV--KSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLNKDEVSEKSRIVMRSRG 278
KQ+V ++GEE E+ F ++ +++ D GWKERG G L +N K+R+VMR++G
Sbjct: 292 KQEVSTETGEENEKVAFSADSIMFEYLD--GGWKERGKGELKVNVSSNDGKARLVMRAKG 349
Query: 279 LLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAVDENKNPVQ-YALRTGKAEIADELYE 337
++ILN L + G F + +V E K + +AL+ I +E
Sbjct: 350 NYRLILNASLYPEMKLAN---MDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRV 406
Query: 338 KVNAH 342
++ H
Sbjct: 407 AIDKH 411
>Hs4506407 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 201
Score = 52.8 bits (125), Expect = 7e-07
Identities = 31/82 (37%), Positives = 44/82 (52%), Gaps = 2/82 (2%)
Query: 206 ESTPAQSREPTVKLTKQDVKSGEETEESIFQTNAKLYQLTDIKD--GWKERGIGVLHLNK 263
ES EP V L +Q++K+ EE EE +F+ AKL++ D WKERG G + L K
Sbjct: 20 ESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLK 79
Query: 264 DEVSEKSRIVMRSRGLLKVILN 285
+ R++MR LK+ N
Sbjct: 80 HKEKGAIRLLMRRDKTLKICAN 101
>Hs19718755 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 1765
Score = 52.8 bits (125), Expect = 7e-07
Identities = 30/86 (34%), Positives = 50/86 (57%), Gaps = 1/86 (1%)
Query: 201 ESEKKESTPAQSREPTVKLT-KQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVL 259
++ K E + EP V++ K ++ +GEE E+ ++ KL++ WKERG+G L
Sbjct: 1025 DAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVSQWKERGLGNL 1084
Query: 260 HLNKDEVSEKSRIVMRSRGLLKVILN 285
+ K+EV+ K R++MR +LKV N
Sbjct: 1085 KILKNEVNGKLRMLMRREQVLKVCAN 1110
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 204 KKESTPAQSREPTVKLTKQ-DVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLN 262
++E Q EP V L +V SGEE E+ +F A++Y+ WKERGIG + +
Sbjct: 1325 QEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKIL 1384
Query: 263 KDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIK 295
++ +++ RIVMR +LK+ N + S++
Sbjct: 1385 QNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQ 1417
>Hs22041001 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 1021
Score = 52.0 bits (123), Expect = 1e-06
Identities = 30/86 (34%), Positives = 50/86 (57%), Gaps = 1/86 (1%)
Query: 201 ESEKKESTPAQSREPTVKLT-KQDVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVL 259
++ K E + EP V++ K ++ +GEE E+ ++ KL++ WKERG+G L
Sbjct: 281 DAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNL 340
Query: 260 HLNKDEVSEKSRIVMRSRGLLKVILN 285
+ K+EV+ K R++MR +LKV N
Sbjct: 341 KILKNEVNGKLRMLMRREQVLKVCAN 366
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 204 KKESTPAQSREPTVKLTKQ-DVKSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLN 262
++E Q EP V L +V SGEE E+ +F A++Y+ WKERGIG + +
Sbjct: 581 QEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKIL 640
Query: 263 KDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIK 295
++ +++ RIVMR +LK+ N + S++
Sbjct: 641 QNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQ 673
>At3g15970 [U] KOG0864 Ran-binding protein RANBP1 and related RanBD domain
proteins
Length = 465
Score = 50.8 bits (120), Expect = 3e-06
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 207 STPAQSREPTVKL-TKQDV--KSGEETEESIFQTNAKLYQLTDIKDGWKERGIGVLHLN- 262
S +S E T +KQDV ++GEE E++ F ++ +++ ++ GWKERG G L +N
Sbjct: 304 SITTKSTETTTAFPSKQDVSVETGEENEKAAFTADSVMFEY--LEGGWKERGKGELKVNI 361
Query: 263 KDEVSEKSRIVMRSRGLLKVILNLPLVKGFSIKKGFPGSLNGEKFVRILAVDENKNPVQ- 321
+ K+R+VMRS+G ++ LN L + K G F + +V + K+ +
Sbjct: 362 STTENRKARLVMRSKGNYRLTLNASLYPEMKLAK---MDKKGITFACVNSVSDAKDGLST 418
Query: 322 YALRTGKAEIADELYEKVNAH 342
AL+ + +E + H
Sbjct: 419 LALKFKDPTVVEEFRAVIEEH 439
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.305 0.126 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,874,150
Number of Sequences: 60738
Number of extensions: 571675
Number of successful extensions: 1745
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1711
Number of HSP's gapped (non-prelim): 29
length of query: 346
length of database: 30,389,216
effective HSP length: 107
effective length of query: 239
effective length of database: 23,890,250
effective search space: 5709769750
effective search space used: 5709769750
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)