ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII2096  good          O     KOG3493  Posttranslational modification, protein turnover, chaperones   Ubiquitin-like protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII2096 742530  742751 74   
         (74 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNR032c-a [O] KOG3493 Ubiquitin-like protein                          122   7e-29
SPBC31E1.03 [O] KOG3493 Ubiquitin-like protein                         99   1e-21
At5g42300 [O] KOG3493 Ubiquitin-like protein                           97   5e-21
Hs13236510 [O] KOG3493 Ubiquitin-like protein                          96   9e-21
At3g45180 [O] KOG3493 Ubiquitin-like protein                           94   4e-20
CE10602 [O] KOG3493 Ubiquitin-like protein                             92   1e-19
7302308 [O] KOG3493 Ubiquitin-like protein                             91   3e-19

>YNR032c-a [O] KOG3493 Ubiquitin-like protein
          Length = 73

 Score =  122 bits (307), Expect = 7e-29
 Identities = 61/74 (82%), Positives = 69/74 (92%), Gaps = 1/74 (1%)

Query: 1  MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
          MIEV+VNDRLGKKV VKCL+ED+VGDFKKVLS+Q+GT   +KIVLQKGGSVLKDHI+LED
Sbjct: 1  MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGT-QPNKIVLQKGGSVLKDHISLED 59

Query: 61 YEVHDGTNLELYYV 74
          YEVHD TNLELYY+
Sbjct: 60 YEVHDQTNLELYYL 73


>SPBC31E1.03 [O] KOG3493 Ubiquitin-like protein
          Length = 73

 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 1  MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
          MIEVL NDRLGKKV VKC+ +DTVGDFKK+++ Q GT    +IVL+K  SV KD+ITL D
Sbjct: 1  MIEVLCNDRLGKKVRVKCMPDDTVGDFKKLVAAQTGT-DPRRIVLKKWHSVFKDNITLAD 59

Query: 61 YEVHDGTNLELYY 73
          YE+HDG +LE+YY
Sbjct: 60 YEIHDGMSLEMYY 72


>At5g42300 [O] KOG3493 Ubiquitin-like protein
          Length = 73

 Score = 96.7 bits (239), Expect = 5e-21
 Identities = 46/73 (63%), Positives = 58/73 (79%), Gaps = 1/73 (1%)

Query: 1  MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
          MIEV++NDRLGKKV VKC  +DT+GD KK+++ Q GT  A KI +QK  ++ KDHITL+D
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGT-RAEKIRIQKWYNIYKDHITLKD 59

Query: 61 YEVHDGTNLELYY 73
          YE+HDG  LELYY
Sbjct: 60 YEIHDGMGLELYY 72


>Hs13236510 [O] KOG3493 Ubiquitin-like protein
          Length = 73

 Score = 95.9 bits (237), Expect = 9e-21
 Identities = 45/73 (61%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 1  MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
          MIEV+ NDRLGKKV VKC ++DT+GD KK+++ Q GT   +KIVL+K  ++ KDH++L D
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGT-RWNKIVLKKWYTIFKDHVSLGD 59

Query: 61 YEVHDGTNLELYY 73
          YE+HDG NLELYY
Sbjct: 60 YEIHDGMNLELYY 72


>At3g45180 [O] KOG3493 Ubiquitin-like protein
          Length = 73

 Score = 93.6 bits (231), Expect = 4e-20
 Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 1  MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
          MIEV++NDRLGKKV VKC  EDT+GD KK+++ Q GT    KI +QK  ++ KDHI L+D
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEEDTIGDLKKLVAAQTGT-RPEKIRIQKWYNIYKDHIPLKD 59

Query: 61 YEVHDGTNLELYY 73
          YE+HDG  LELYY
Sbjct: 60 YEIHDGMGLELYY 72


>CE10602 [O] KOG3493 Ubiquitin-like protein
          Length = 73

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 1/73 (1%)

Query: 1  MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
          MIE+ VNDRLGKKV +KC   DT+GD KK+++ Q GT    KIVL+K  ++ KDHITL D
Sbjct: 1  MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGT-RWEKIVLKKWYTIYKDHITLMD 59

Query: 61 YEVHDGTNLELYY 73
          YE+H+G N ELYY
Sbjct: 60 YEIHEGFNFELYY 72


>7302308 [O] KOG3493 Ubiquitin-like protein
          Length = 73

 Score = 90.9 bits (224), Expect = 3e-19
 Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 1/73 (1%)

Query: 1  MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60
          MIE+  NDRLGKKV VKC  +DT+GD KK+++ Q GT    KIVL+K  ++ KD I L D
Sbjct: 1  MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGT-KHEKIVLKKWYTIFKDPIRLSD 59

Query: 61 YEVHDGTNLELYY 73
          YE+HDG NLELYY
Sbjct: 60 YEIHDGMNLELYY 72


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.315    0.136    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,096,585
Number of Sequences: 60738
Number of extensions: 119137
Number of successful extensions: 290
Number of sequences better than 1.0e-05: 7
Number of HSP's better than  0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 276
Number of HSP's gapped (non-prelim): 7
length of query: 74
length of database: 30,389,216
effective HSP length: 50
effective length of query: 24
effective length of database: 27,352,316
effective search space: 656455584
effective search space used: 656455584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)