ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII2117  suspect: LH   S     KOG4034  Function unknown                                               Uncharacterized conserved protein NOF (Neighbor of FAU)

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII2117 751571  752101 177  
         (177 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YCR071c [S] KOG4034 Uncharacterized conserved protein NOF (Neigh...   139   2e-33

>YCR071c [S] KOG4034 Uncharacterized conserved protein NOF (Neighbor of FAU)
          Length = 146

 Score =  139 bits (351), Expect = 2e-33
 Identities = 67/104 (64%), Positives = 83/104 (79%), Gaps = 1/104 (0%)

Query: 75  VFPKLEDVSPEEVVGAAPFGKKTYFIQRSINGNLPVYTDYKNS-NKIVTEIRKIQGDPVQ 133
           +FPKLEDV   E++G   FGKKTY+++RS  GNLPVY+ YKN  NKI+TEIRKI+GD +Q
Sbjct: 43  IFPKLEDVKMHELIGNNNFGKKTYYVERSRTGNLPVYSAYKNGGNKIITEIRKIEGDVIQ 102

Query: 134 LRNDLQERLPFIPKKYWKVILQSNKIIIEGDATKHVKRALATTF 177
           LRNDLQE+LPFIPKK W V++QS KIII+G+A + VKR L   F
Sbjct: 103 LRNDLQEQLPFIPKKSWSVVMQSKKIIIKGNAVEAVKRVLTKKF 146


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.317    0.134    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,101,526
Number of Sequences: 60738
Number of extensions: 353613
Number of successful extensions: 975
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 973
Number of HSP's gapped (non-prelim): 1
length of query: 177
length of database: 30,389,216
effective HSP length: 99
effective length of query: 78
effective length of database: 24,376,154
effective search space: 1901340012
effective search space used: 1901340012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)