ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2207 good R KOG1124 General function prediction only FOG: TPR repeat
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2207 782073 781729 -115
(115 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YCR060w [R] KOG1124 FOG: TPR repeat 91 3e-19
Hs4506921 [R] KOG0553 TPR repeat-containing protein 55 1e-08
ECU09g1180 [R] KOG0553 TPR repeat-containing protein 54 5e-08
Hs15295671 [R] KOG0553 TPR repeat-containing protein 50 4e-07
7298392 [R] KOG0553 TPR repeat-containing protein 50 7e-07
CE12646 [O] KOG0548 Molecular co-chaperone STI1 49 1e-06
At1g78120 [R] KOG1124 FOG: TPR repeat 49 1e-06
At1g12270 [O] KOG0548 Molecular co-chaperone STI1 49 1e-06
At5g09420_2 [R] KOG1124 FOG: TPR repeat 48 2e-06
SPAC17G6.19c [R] KOG0553 TPR repeat-containing protein 46 7e-06
At1g62740 [O] KOG0548 Molecular co-chaperone STI1 46 7e-06
>YCR060w [R] KOG1124 FOG: TPR repeat
Length = 111
Score = 90.5 bits (223), Expect = 3e-19
Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 1 MPSFEEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQM 60
M FE+ K +GN+ +KQ + +AV+ Y + IT P NPVGYSN AMALIKL Y A QM
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQM 60
Query: 61 CQRGLFYVNEQTDNDNKVRKKLQWRLNVCSEQLKDDLISVQIHEVDKLPSKY 112
CQ+GL Y + T +R KLQ+RL + + + + + EVD+LP Y
Sbjct: 61 CQQGLRYTS--TAEHVAIRSKLQYRLELAQGAVGS--VQIPVVEVDELPEGY 108
>Hs4506921 [R] KOG0553 TPR repeat-containing protein
Length = 313
Score = 55.5 bits (132), Expect = 1e-08
Identities = 29/61 (47%), Positives = 35/61 (56%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQMCQRG 64
E K +GN K NF AV+FY KAI +P N V + N A A KL NYA A Q C+R
Sbjct: 92 ERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERA 151
Query: 65 L 65
+
Sbjct: 152 I 152
>ECU09g1180 [R] KOG0553 TPR repeat-containing protein
Length = 233
Score = 53.5 bits (127), Expect = 5e-08
Identities = 29/61 (47%), Positives = 34/61 (55%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQMCQRG 64
EE K KGN Y +F AV+ Y +AI YDPTN V SN A A KL A + C+ G
Sbjct: 45 EEMKNKGNEEYNNGDFQSAVDSYTQAILYDPTNAVYLSNRAAAYSKLGMTESAIEDCESG 104
Query: 65 L 65
L
Sbjct: 105 L 105
>Hs15295671 [R] KOG0553 TPR repeat-containing protein
Length = 304
Score = 50.4 bits (119), Expect = 4e-07
Identities = 24/61 (39%), Positives = 36/61 (58%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQMCQRG 64
++ K +GN K+ N+ AV+ Y +AI DP N V Y N A A KL +Y DA + C++
Sbjct: 86 DQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKA 145
Query: 65 L 65
+
Sbjct: 146 I 146
>7298392 [R] KOG0553 TPR repeat-containing protein
Length = 331
Score = 49.7 bits (117), Expect = 7e-07
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQMCQRG 64
E K +GN K+N + +A+ Y +AI +DP NP+ Y N A A I+L A C+
Sbjct: 117 ESIKNEGNRLMKENKYNEALLQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSA 176
Query: 65 LFYVN 69
L Y N
Sbjct: 177 LVYNN 181
>CE12646 [O] KOG0548 Molecular co-chaperone STI1
Length = 320
Score = 48.9 bits (115), Expect = 1e-06
Identities = 30/91 (32%), Positives = 45/91 (48%), Gaps = 1/91 (1%)
Query: 11 GNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQMCQRGLFYVNE 70
GN AYKQ +F A Y KAI DP+N Y+N A + +A+ Q C++ + V
Sbjct: 12 GNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAV-EVGR 70
Query: 71 QTDNDNKVRKKLQWRLNVCSEQLKDDLISVQ 101
+T D K+ K R ++ D ++VQ
Sbjct: 71 ETRADYKLIAKAMSRAGNAFQKQNDLSLAVQ 101
>At1g78120 [R] KOG1124 FOG: TPR repeat
Length = 530
Score = 48.9 bits (115), Expect = 1e-06
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 21/112 (18%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQMCQRG 64
E K GN Y + F A+ FY++AI+ DP P +SN + ALI L +AS C+
Sbjct: 160 ETLKKMGNEEYCRGRFGQALVFYERAISADPKTPTYWSNKSAALISLGRLLEASDACEEA 219
Query: 65 LFYVNEQTDNDNKVRKKLQWRLNVCSEQLKDDLISVQIH--EVDKLPSKYQD 114
L RLN E+ L S+Q+ EV+K Y +
Sbjct: 220 L-------------------RLNPTYERAHQRLASLQLRLGEVEKALCHYNE 252
>At1g12270 [O] KOG0548 Molecular co-chaperone STI1
Length = 572
Score = 48.9 bits (115), Expect = 1e-06
Identities = 24/53 (45%), Positives = 33/53 (61%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADA 57
EE K KGN A+ +FT A+N + +AI PTN V +SN + A L+ YA+A
Sbjct: 3 EEAKAKGNAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEA 55
>At5g09420_2 [R] KOG1124 FOG: TPR repeat
Length = 156
Score = 48.1 bits (113), Expect = 2e-06
Identities = 30/89 (33%), Positives = 42/89 (46%), Gaps = 8/89 (8%)
Query: 1 MPSFEEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADASQM 60
M + E K KGN AYK + AVNFY +AI + N Y N A A ++L + A Q
Sbjct: 25 MEASEVMKEKGNAAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCFQQAEQD 84
Query: 61 CQRGLF--------YVNEQTDNDNKVRKK 81
C + + Y+ T ++ VR K
Sbjct: 85 CTKAMLIDKKNVKAYLRRGTARESLVRYK 113
>SPAC17G6.19c [R] KOG0553 TPR repeat-containing protein
Length = 317
Score = 46.2 bits (108), Expect = 7e-06
Identities = 22/53 (41%), Positives = 33/53 (61%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADA 57
E+ K++GN A ++ A++ Y KAI DPT+PV YSN A A +L + +A
Sbjct: 84 EKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENA 136
>At1g62740 [O] KOG0548 Molecular co-chaperone STI1
Length = 571
Score = 46.2 bits (108), Expect = 7e-06
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 5 EEFKIKGNTAYKQNNFTDAVNFYKKAITYDPTNPVGYSNCAMALIKLNNYADA 57
+E K KGN A+ +F AVN + AI PTN V +SN + A LN+Y +A
Sbjct: 3 DEAKAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEA 55
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,463,947
Number of Sequences: 60738
Number of extensions: 287924
Number of successful extensions: 992
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 963
Number of HSP's gapped (non-prelim): 30
length of query: 115
length of database: 30,389,216
effective HSP length: 91
effective length of query: 24
effective length of database: 24,862,058
effective search space: 596689392
effective search space used: 596689392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)