ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2336 good O KOG3470 Posttranslational modification, protein turnover, chaperones Beta-tubulin folding cofactor A
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2336 824297 823983 -105
(105 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR265w [O] KOG3470 Beta-tubulin folding cofactor A 135 9e-33
Hs4759212 [O] KOG3470 Beta-tubulin folding cofactor A 60 7e-10
At2g30410 [O] KOG3470 Beta-tubulin folding cofactor A 53 6e-08
7302085 [O] KOG3470 Beta-tubulin folding cofactor A 52 2e-07
>YOR265w [O] KOG3470 Beta-tubulin folding cofactor A
Length = 106
Score = 135 bits (340), Expect = 9e-33
Identities = 63/103 (61%), Positives = 86/103 (83%)
Query: 1 MAPTQLEIKERALKRLCKEEHFYQEELEQQKLHVKKLQSDPSVDPYDLKKQVEVQQDTER 60
MAPTQL+IK +ALKRL KEE +YQ+EL+ Q+ HV KL+ D SVDPYDLKKQ EV DT+R
Sbjct: 1 MAPTQLDIKVKALKRLTKEEGYYQQELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKR 60
Query: 61 LLPELYKKIKQFRDDLDKYLSSYEGTEDLESAKAALETADELL 103
LLP LY+KI++F++DL+++L +Y+GTED+ A++A+ +A ELL
Sbjct: 61 LLPTLYEKIREFKEDLEQFLKTYQGTEDVSDARSAITSAQELL 103
>Hs4759212 [O] KOG3470 Beta-tubulin folding cofactor A
Length = 108
Score = 59.7 bits (143), Expect = 7e-10
Identities = 29/98 (29%), Positives = 60/98 (60%), Gaps = 1/98 (1%)
Query: 5 QLEIKERALKRLCKEEHFYQEELEQQKLHVKKLQSDPSVDPYDLKKQVEVQQDTERLLPE 64
Q++IK +KRL KE+ Y++E +QQ+ ++K++++ + YD+KKQ E+ Q++ ++P+
Sbjct: 8 QIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDG-ENYDIKKQAEILQESRMMIPD 66
Query: 65 LYKKIKQFRDDLDKYLSSYEGTEDLESAKAALETADEL 102
++++ DL + L + + E+ E K A D +
Sbjct: 67 CQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSV 104
>At2g30410 [O] KOG3470 Beta-tubulin folding cofactor A
Length = 101
Score = 53.1 bits (126), Expect = 6e-08
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 6 LEIKERALKRLCKEEHFYQEELEQQKLHVKKLQSDPSVDPYDLKKQVEVQQDTERLLPEL 65
L+IK KR+ KE H Y++E+E++ ++ D DPYDLK+Q V ++ ++P+
Sbjct: 7 LKIKTSTCKRIVKELHSYEKEVEREAAKTADMK-DKGADPYDLKQQENVLGESRMMIPDC 65
Query: 66 YKKIKQFRDDLDKYLSSY 83
+K+++ DL L +Y
Sbjct: 66 HKRLESALADLKSTLVNY 83
>7302085 [O] KOG3470 Beta-tubulin folding cofactor A
Length = 110
Score = 51.6 bits (122), Expect = 2e-07
Identities = 34/104 (32%), Positives = 62/104 (58%), Gaps = 11/104 (10%)
Query: 5 QLEIKERALKRLCKEEHFYQEELEQQKLHVKKLQSDPSVDPYDLKKQVEVQQDTERLLPE 64
QL IK ++RL +E++ Y +E+ ++ ++KL+ D D + L+KQ EV Q+ ++P+
Sbjct: 8 QLVIKSGVVRRLTREKYCYAKEVLTEQARLEKLRGD-GADDHVLRKQEEVIQECIMMVPD 66
Query: 65 LYKKIKQFRDDLDKYLS---------SY-EGTEDLESAKAALET 98
+++++ + L+KYL+ SY + E L+ AKA LET
Sbjct: 67 SKRRLQKEYEVLEKYLADEQDLIETDSYKKAAEILKDAKAELET 110
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.309 0.130 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,455,891
Number of Sequences: 60738
Number of extensions: 270112
Number of successful extensions: 1504
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1501
Number of HSP's gapped (non-prelim): 4
length of query: 105
length of database: 30,389,216
effective HSP length: 81
effective length of query: 24
effective length of database: 25,469,438
effective search space: 611266512
effective search space used: 611266512
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)