ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2350 good R KOG1533 General function prediction only Predicted GTPase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2350 827650 826610 -347
(347 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR262w [R] KOG1533 Predicted GTPase 593 e-169
SPAC144.07c [R] KOG1533 Predicted GTPase 313 3e-85
At5g22370 [R] KOG1533 Predicted GTPase 257 2e-68
Hs8922366 [R] KOG1533 Predicted GTPase 243 2e-64
7294480 [R] KOG1533 Predicted GTPase 229 4e-60
CE07684 [R] KOG1533 Predicted GTPase 188 1e-47
YLR243w [K] KOG1534 Putative transcription factor FET5 174 2e-43
SPAC4D7.12c [K] KOG1534 Putative transcription factor FET5 156 5e-38
Hs21361523 [K] KOG1534 Putative transcription factor FET5 150 2e-36
At4g12790 [K] KOG1534 Putative transcription factor FET5 148 1e-35
ECU07g0540 [K] KOG1534 Putative transcription factor FET5 148 1e-35
CE23026 [K] KOG1534 Putative transcription factor FET5 145 9e-35
7298847 [K] KOG1534 Putative transcription factor FET5 145 1e-34
HsM9994189 [K] KOG1534 Putative transcription factor FET5 140 4e-33
Hs14149629 [L] KOG1532 GTPase XAB1 interacts with DNA repair pro... 100 5e-21
SPBC119.15 [L] KOG1532 GTPase XAB1 interacts with DNA repair pro... 98 2e-20
CE01182 [L] KOG1532 GTPase XAB1 interacts with DNA repair protei... 97 3e-20
ECU06g1300 [R] KOG1533 Predicted GTPase 96 8e-20
YJR072c [L] KOG1532 GTPase XAB1 interacts with DNA repair protei... 89 9e-18
At4g21800 [L] KOG1532 GTPase XAB1 interacts with DNA repair prot... 86 6e-17
7290105 [L] KOG1532 GTPase XAB1 interacts with DNA repair protei... 84 2e-16
ECU02g1430 [L] KOG1532 GTPase XAB1 interacts with DNA repair pro... 77 4e-14
>YOR262w [R] KOG1533 Predicted GTPase
Length = 347
Score = 593 bits (1528), Expect = e-169
Identities = 281/347 (80%), Positives = 319/347 (90%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLE 60
MPF QIVIGPPGSGKSTYC+GCSQFFNAIGRH QV+NMDPAN LPYPC+VDIRD+ITLE
Sbjct: 1 MPFAQIVIGPPGSGKSTYCNGCSQFFNAIGRHSQVVNMDPANDALPYPCAVDIRDFITLE 60
Query: 61 EIMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSAL 120
EIM EQ LGPNGGLMYA+ESL+ SIDLFILQIKSLV+EEKAYLVFDCPGQVELFTH+S+L
Sbjct: 61 EIMQEQQLGPNGGLMYAVESLDNSIDLFILQIKSLVEEEKAYLVFDCPGQVELFTHHSSL 120
Query: 121 FKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDML 180
F IFK++EK+LDIR CVVNLIDC Y+TSPSQY+SILLLALRSMLMMDLPHINVFSKIDML
Sbjct: 121 FNIFKKMEKELDIRFCVVNLIDCFYMTSPSQYISILLLALRSMLMMDLPHINVFSKIDML 180
Query: 181 KGYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVL 240
K YGELPFRLDY+TEVQ+L+YL P IEKEGS VLG+KYS+LTETI E+VSDFNLVSFEVL
Sbjct: 181 KSYGELPFRLDYYTEVQDLDYLEPYIEKEGSSVLGKKYSKLTETIKELVSDFNLVSFEVL 240
Query: 241 AIDDKQSMINLQSVIDKANGYIFGSSEIGGDTVWAEASRQGAAMVNYDVHDRWIENKETY 300
++DDK+SMINLQ VIDKANGYIFG+SE+GGDTVWAEASR+GA + NYD+ DRWI+NKE Y
Sbjct: 241 SVDDKESMINLQGVIDKANGYIFGASEVGGDTVWAEASREGALIANYDIQDRWIDNKEKY 300
Query: 301 DKLEKEARDQQLKEREMQAKEIDVNEDDEWESALREWEEKQGTNYVR 347
DK E+E R LKE+E+Q K +DVNE+DEWE+AL+EWEEKQG ++VR
Sbjct: 301 DKEEEEKRTALLKEQELQNKAVDVNEEDEWENALKEWEEKQGMDFVR 347
>SPAC144.07c [R] KOG1533 Predicted GTPase
Length = 315
Score = 313 bits (801), Expect = 3e-85
Identities = 152/317 (47%), Positives = 217/317 (67%), Gaps = 7/317 (2%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLE 60
MPF Q+V+GPPGSGKSTYC G Q +AIGR ++N+DPAN + YPC++DIR + +E
Sbjct: 1 MPFCQVVVGPPGSGKSTYCFGMYQLLSAIGRSSIIVNLDPANDFIKYPCAIDIRKVLDVE 60
Query: 61 EIMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSAL 120
I + LGPNG L+YA+E++ ++ + ++K + +Y++FDCPGQVELFT++++L
Sbjct: 61 MIQKDYDLGPNGALIYAMEAIEYHVEWLLKELK---KHRDSYVIFDCPGQVELFTNHNSL 117
Query: 121 FKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDML 180
KI K LEK+LD R V L+D T+PS YVS LL+ L+ ML +D+PH+N+ SK D+L
Sbjct: 118 QKIIKTLEKELDYRPVSVQLVDAYCCTNPSAYVSALLVCLKGMLQLDMPHVNILSKADLL 177
Query: 181 KGYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVL 240
YG LP +LD+FTEVQ+L YL PL++++ ++YS L + I E+V DFNLVSFEV+
Sbjct: 178 CTYGTLPMKLDFFTEVQDLSYLAPLLDRDKR---LQRYSDLNKAICELVEDFNLVSFEVV 234
Query: 241 AIDDKQSMINLQSVIDKANGYIFGSSEIGGDTVWAEASRQGA-AMVNYDVHDRWIENKET 299
A+++K SM+ + ID+A GY +GS+EIGGD VW A RQG + +RWI+ KE
Sbjct: 235 AVENKASMLRVLRKIDQAGGYAYGSTEIGGDAVWVNAVRQGGDPLQGISPQERWIDKKEE 294
Query: 300 YDKLEKEARDQQLKERE 316
YDK E E + + +
Sbjct: 295 YDKYEWELEQKSTMDED 311
>At5g22370 [R] KOG1533 Predicted GTPase
Length = 291
Score = 257 bits (657), Expect = 2e-68
Identities = 132/288 (45%), Positives = 191/288 (65%), Gaps = 9/288 (3%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLE 60
M FGQ+VIGPPGSGK+TYC+G SQF + +GR V ++N+DPAN LPY C V+I + I LE
Sbjct: 1 MVFGQVVIGPPGSGKTTYCNGMSQFLSLMGRKVAIVNLDPANDALPYECGVNIEELIKLE 60
Query: 61 EIMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSAL 120
++MSE LGPNGGL+Y +E L ++ID ++K L+++ Y++FD PGQVELF + +
Sbjct: 61 DVMSEHSLGPNGGLVYCMEYLEKNIDWLESKLKPLLKDH--YILFDFPGQVELFFIHDST 118
Query: 121 FKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDML 180
+ +L K L++RL V LID P YVS LLL+L +ML M+LPH+NV SKID++
Sbjct: 119 KNVLTKLIKSLNLRLTAVQLIDSHLCCDPGNYVSSLLLSLSTMLHMELPHVNVLSKIDLI 178
Query: 181 KGYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVL 240
YG+L F LD++T+VQ+L YL + ++ KY +LT+ + ++ D++LV+F L
Sbjct: 179 GSYGKLAFNLDFYTDVQDLSYLEHHLSQDPRSA---KYRKLTKELCSVIEDYSLVNFTTL 235
Query: 241 AIDDKQSMINLQSVIDKANGYIFGSSEIGGDTVWAEASRQGAAMVNYD 288
I DK+S+ +L +IDK+NGYIF G D E S+ ++D
Sbjct: 236 DIQDKESVGDLVKLIDKSNGYIFA----GIDASVVEYSKIAIGQTDWD 279
>Hs8922366 [R] KOG1533 Predicted GTPase
Length = 310
Score = 243 bits (621), Expect = 2e-64
Identities = 121/265 (45%), Positives = 177/265 (66%), Gaps = 7/265 (2%)
Query: 3 FGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEI 62
FGQ V GPPGSGK+TYC G S+F A+GR V V+N+DPAN LPY C+VD+ + + L ++
Sbjct: 10 FGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 63 MSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALFK 122
M LGPNGGL+Y +E L ++D ++ L Y +FDCPGQVEL TH+ AL
Sbjct: 70 MDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL---RGHYFLFDCPGQVELCTHHGALRS 126
Query: 123 IFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKG 182
IF ++ + D+RL V+L+D Y T P++++S+L +L +ML ++LPHIN+ SK+D+++
Sbjct: 127 IFSQMAQ-WDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEH 185
Query: 183 YGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVLAI 242
YG+L F LDY+TEV +L Y L++ S R Y +L E + +++ D++LVSF L I
Sbjct: 186 YGKLAFNLDYYTEVLDLSY---LLDHLASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNI 242
Query: 243 DDKQSMINLQSVIDKANGYIFGSSE 267
DK+S+ + +DKANGY F + E
Sbjct: 243 QDKESIQRVLQAVDKANGYCFRAQE 267
>7294480 [R] KOG1533 Predicted GTPase
Length = 306
Score = 229 bits (584), Expect = 4e-60
Identities = 120/291 (41%), Positives = 185/291 (63%), Gaps = 8/291 (2%)
Query: 3 FGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEI 62
+GQ++IGPPGSGK+TYC +F+ +GR V V+N+DPAN + Y + + + IT+E+
Sbjct: 15 YGQLIIGPPGSGKTTYCGEALKFYRELGRQVGVVNLDPANENMSYEPVLSVMELITVEDC 74
Query: 63 MSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALFK 122
M LGPNG LM+ E L + ++ ++L + Y +FDCPGQVEL+TH++A+ +
Sbjct: 75 MEHLKLGPNGALMHCAEYLADHLEDWLLPALRKLSATYNYFLFDCPGQVELYTHHNAMAR 134
Query: 123 IFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKG 182
IF+RLE++ L VNLID Y + P+++++ LL+AL +ML M LPH+NV SK D+LK
Sbjct: 135 IFERLERE-RYSLVTVNLIDSHYCSEPAKFIATLLMALNTMLRMSLPHVNVLSKADLLKK 193
Query: 183 Y-GELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVLA 241
+ +L F +DY+T+V +L+Y L++K RKY +L I MV D+ LVSF++L
Sbjct: 194 HETKLHFNVDYYTDVLDLKY---LLDKLDDDPAMRKYRKLNAAICSMVEDYALVSFQLLD 250
Query: 242 IDDKQSMINLQSVIDKANGYIFGSSE---IGGDTVWAEASRQGAAMVNYDV 289
+ SM+ L++ IDKANGY++ + E + A + AA + +DV
Sbjct: 251 VFSTDSMLRLRNHIDKANGYVYKAGEEQTVNSLLACAVGAETEAARMEHDV 301
>CE07684 [R] KOG1533 Predicted GTPase
Length = 300
Score = 188 bits (477), Expect = 1e-47
Identities = 98/259 (37%), Positives = 161/259 (61%), Gaps = 9/259 (3%)
Query: 3 FGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEI 62
+G +VIG PG+GKST+C G + F+ R IN+DPAN + Y V+I + IT+ ++
Sbjct: 34 YGVLVIGAPGAGKSTFCAGLTDIFSQTKRPFLTINLDPANDTMAYAPDVNITEMITVNDV 93
Query: 63 MSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALFK 122
M LGPNG L Y IE+L + + + +I++ K YL+ DCPGQ+EL+ L+K
Sbjct: 94 MDRLGLGPNGALKYCIETLGANCNWLLQKIEA---NHKKYLIIDCPGQLELYKSEGELWK 150
Query: 123 IFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKG 182
+ + LEK +RLC ++L D +Y + PS+++S+ L L +M+ M++P +N SK D+
Sbjct: 151 VIRFLEKS-GVRLCALHLADSLYCSDPSKFISVALSTLATMVTMEMPQVNCLSKADLFSE 209
Query: 183 YGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVLAI 242
G + L++F+ + ++ L L+ E G+ KY +L E I ++SDF+LVSF LA+
Sbjct: 210 DG--TYDLEFFSHLPDVNRLLDLL-NEVPGL--EKYRKLNEAICGVISDFDLVSFVPLAV 264
Query: 243 DDKQSMINLQSVIDKANGY 261
++K+SM+ + ++D ANG+
Sbjct: 265 ENKESMMKVIQMVDAANGF 283
>YLR243w [K] KOG1534 Putative transcription factor FET5
Length = 272
Score = 174 bits (440), Expect = 2e-43
Identities = 99/293 (33%), Positives = 154/293 (51%), Gaps = 30/293 (10%)
Query: 4 GQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEIM 63
G +V+GP G+GKST+C+ +GR ++N+DPA Y ++DIRD I+L+++M
Sbjct: 5 GVMVLGPAGAGKSTFCNSIISHMQTVGRRAHIVNLDPAAEATKYEFTIDIRDLISLDDVM 64
Query: 64 SEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALFKI 123
E LGPNG L+Y E L +++D +I E YL+FDCPGQ+EL+TH L I
Sbjct: 65 EEMDLGPNGALIYCFEYLLKNLDWLDEEIGDFNDE---YLIFDCPGQIELYTHIPVLPNI 121
Query: 124 FKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKGY 183
+ L + L+ LC L++ ++ S++ S L A+ +M++++LPHINV SK+D++KG
Sbjct: 122 VRHLTQQLNFNLCATYLLEAPFVIDSSKFFSGALSAMSAMILLELPHINVLSKLDLIKG- 180
Query: 184 GELPFRLDYFTEVQELEYLNP----LIEKEGSGVLGR-KYSRLTETIGEMVSDFNLVSFE 238
+ + +LNP L+E EG K+ RL + I +V DF +V F
Sbjct: 181 --------DINKKKLKRFLNPDAMLLMETEGMNQASNPKFLRLNQCIANLVDDFGMVQFL 232
Query: 239 VLAIDDKQSMINLQSVIDKANGYIFGSSEIGGDTVWAEASRQGAAMVNYDVHD 291
L ++ S+ + S +D T WAE Q DV +
Sbjct: 233 PLESNNPDSIETILSYVDDI-------------TQWAEGQEQKEPNDQIDVEE 272
>SPAC4D7.12c [K] KOG1534 Putative transcription factor FET5
Length = 276
Score = 156 bits (394), Expect = 5e-38
Identities = 85/255 (33%), Positives = 146/255 (56%), Gaps = 13/255 (5%)
Query: 7 VIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEIMSEQ 66
V G SGKST+C + ++GR ++N+DPA + +VDIRD I+++++M E
Sbjct: 8 VCGVASSGKSTFCGALMSYMKSVGRSCHLVNLDPAAENFEWEPTVDIRDLISIDDVMEEL 67
Query: 67 HLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALFKIFKR 126
GPNGGL+Y E L E++D +I ++ YL+FD PGQ+EL+TH L + +
Sbjct: 68 DYGPNGGLIYCFEFLMENLDWLNEEIGDY---DEDYLIFDMPGQIELYTHVPILPALIRH 124
Query: 127 LEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKGYGEL 186
L+ L+ R C V L++ ++ +++ + +L A+ +M+MM++PHIN+ SK+D+LK +
Sbjct: 125 LQVTLNFRPCAVYLLESQFLVDRTKFFAGVLSAMSAMVMMEVPHINLLSKMDLLKDNNNI 184
Query: 187 PFRLDYFTEVQELEYLNP---LIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVLAID 243
T+ + +LN L+ E + K+ L I +++ DFN+V+F L
Sbjct: 185 -------TKAELKRFLNTDPLLLTGEINETTNPKFHELNRCIVQLIDDFNMVNFLPLESG 237
Query: 244 DKQSMINLQSVIDKA 258
+++S+ + S ID A
Sbjct: 238 NEESVSRVLSYIDDA 252
>Hs21361523 [K] KOG1534 Putative transcription factor FET5
Length = 284
Score = 150 bits (380), Expect = 2e-36
Identities = 87/260 (33%), Positives = 151/260 (57%), Gaps = 23/260 (8%)
Query: 3 FGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEI 62
+ Q+V+GP GSGKSTYC Q A+ R VQV+N+DPA Y DIR+ I ++++
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 63 MSEQHL--GPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSAL 120
M + L GPNGGL++ +E + D L E Y++FDCPGQ+EL+TH +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWL---ENCLGHVEDDYILFDCPGQIELYTHLPVM 120
Query: 121 FKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDML 180
++ ++LE+ + R+C V L+D ++ +++S +L AL +M+ +++P +N+ +K+D+L
Sbjct: 121 KQLVQQLEQ-WEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLL 179
Query: 181 KGYGELPFRLDYFTEVQELE-YLNP----LIEKEGSGVLGRKYSRLTETIGEMVSDFNLV 235
+ +E+E +L+P L+E S + +K+ +LT+ I ++ D+++V
Sbjct: 180 SKKAK-----------KEIEKFLDPDMYSLLEDSTSDLRSKKFKKLTKAICGLIDDYSMV 228
Query: 236 SFEVLAIDDKQSM-INLQSV 254
F D++SM I LQ +
Sbjct: 229 RFLPYDQSDEESMNIALQHI 248
>At4g12790 [K] KOG1534 Putative transcription factor FET5
Length = 282
Score = 148 bits (374), Expect = 1e-35
Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 33/233 (14%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLE 60
M + Q+VIGP GSGKSTYC + IGR + V+N+DPA YP ++DIR+ I+LE
Sbjct: 1 MGYAQLVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLE 60
Query: 61 EIMSEQHLGPNGGLMYAIE-------------------SLNESIDLFILQ-IKSLVQEEK 100
++M + LGPNG LMY +E L + + L++ + V EE
Sbjct: 61 DVMEDLKLGPNGALMYCMEYPLFWLHWQLENVTSFVKSGLEKLLTLYLEDSLHDWVDEEL 120
Query: 101 A------YLVFDCPGQVELFTHNSALFKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVS 154
YL+FDCPGQ+ELFTH L + L K + +CVV L+D +IT ++++S
Sbjct: 121 ENYRDDDYLIFDCPGQIELFTHVPVLKNFVEHL-KQKNFNVCVVYLLDSQFITDVTKFIS 179
Query: 155 ILLLALRSMLMMDLPHINVFSKIDMLKG------YGELPFRLDYFTEVQELEY 201
+ +L +M+ ++LPH+N+ SK+D+L+ YG L F L + V EY
Sbjct: 180 GCMSSLAAMIQLELPHVNILSKMDLLQDKSNIDEYGFLFFPLFFSVAVSVGEY 232
>ECU07g0540 [K] KOG1534 Putative transcription factor FET5
Length = 252
Score = 148 bits (373), Expect = 1e-35
Identities = 94/265 (35%), Positives = 145/265 (54%), Gaps = 21/265 (7%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLE 60
M + V GP GSGKST+C + +GR +VIN+DPA S+D+RD+IT+
Sbjct: 1 MGYAIFVFGPAGSGKSTFCRNIREHGENMGRSYKVINLDPAQISAADDYSIDLRDFITIN 60
Query: 61 EIMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSAL 120
++M + GPNGGL+ A+E L E+I+ L E ++LVFDCPGQ+ELF H+ +
Sbjct: 61 DVMEDYDYGPNGGLLLALEELYENIEEL-----GLEDLEGSFLVFDCPGQIELFMHSDVM 115
Query: 121 FKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDML 180
KI + + + + VV +++ Y+ ++YVS AL SM +D+P INV SK+D++
Sbjct: 116 PKIIEHVGR--YFKCGVVYVMESQYLVDINKYVSGCFCALISMARLDVPCINVISKMDLI 173
Query: 181 KGYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFEVL 240
K F +T +EL L G+G KYSR+ + + V++ N++ F L
Sbjct: 174 KNEDLEVF----YTPTEELSML------IGAG----KYSRICKRMLSFVAENNMLDFHPL 219
Query: 241 AIDDKQSMINLQSVIDKANGYIFGS 265
++S+ + ID A Y GS
Sbjct: 220 DWSKEESVKGILHCIDSAVQYYEGS 244
>CE23026 [K] KOG1534 Putative transcription factor FET5
Length = 272
Score = 145 bits (366), Expect = 9e-35
Identities = 87/263 (33%), Positives = 144/263 (54%), Gaps = 13/263 (4%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLE 60
M + Q+V+GP GSGKSTYC + GR ++++N+DPA YP VD+RD I++
Sbjct: 1 MKYAQLVMGPAGSGKSTYCSVMYNHCLSTGRTLRMVNLDPACEVFNYPAVVDVRDLISVN 60
Query: 61 EIMSEQH--LGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNS 118
++ ++ LGPNG L++ +E L ++++ L + E Y V DCPGQ+EL++H
Sbjct: 61 DVQEDEELILGPNGALVFCMEYLVQNLEWL---HDELDEGEDDYFVIDCPGQIELYSHLP 117
Query: 119 ALFKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKID 178
+ +I L K D +C V LID ++ +++S L AL +M+ ++ P INV +K+D
Sbjct: 118 VMRQIVDAL-KSWDFNVCSVFLIDTNFVLDAEKFISGALTALSAMVAIETPAINVLTKMD 176
Query: 179 MLKGYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLVSFE 238
+L + +D F E I + V K+ +LT TI +++ D+++V F
Sbjct: 177 LLSERNKQ--LVDEFLETDTRS-----IVDQDETVWNSKHRKLTRTIAQVLEDYSIVKFV 229
Query: 239 VLAIDDKQSMINLQSVIDKANGY 261
L +D++S+ L ID Y
Sbjct: 230 PLNCEDEESIDQLLLTIDTTIQY 252
>7298847 [K] KOG1534 Putative transcription factor FET5
Length = 235
Score = 145 bits (365), Expect = 1e-34
Identities = 88/240 (36%), Positives = 136/240 (56%), Gaps = 14/240 (5%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLE 60
M F QI++GP GSGKSTYC Q+ R+VQV+N+DPA Y DIRD I L+
Sbjct: 1 MRFAQIIVGPAGSGKSTYCSLMQQYAMDCKRNVQVVNLDPAAEHFTYNPLTDIRDLIHLD 60
Query: 61 EIMSEQ--HLGPNGGLMYAIESLNESIDLFILQI-----KSLVQE-EKAYLVFDCPGQVE 112
+ M ++ H GPNGGL++ +E L E+ + Q+ + +V E + Y++FD PGQ+E
Sbjct: 61 DAMEDEELHYGPNGGLIFCLEFLIENQEWLKEQLCGGENELMVGEPDDDYILFDMPGQIE 120
Query: 113 LFTHNSALFKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHIN 172
LFTH ++ + LE + R CVV +D ++ ++++S + AL M M+ PHIN
Sbjct: 121 LFTHLKMGRQLVELLE-SWNFRTCVVFCLDSQFMVDGAKFISGTMAALSVMANMEQPHIN 179
Query: 173 VFSKIDMLKGYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDF 232
V +K+D+L + +L+ + E + L G G KY++LT+ IG ++ DF
Sbjct: 180 VLTKVDLLS--SDARKQLEMYLEPDAHSLMGELTIGTG---FGEKYAKLTQAIGALIEDF 234
>HsM9994189 [K] KOG1534 Putative transcription factor FET5
Length = 284
Score = 140 bits (352), Expect = 4e-33
Identities = 83/266 (31%), Positives = 148/266 (55%), Gaps = 22/266 (8%)
Query: 3 FGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEI 62
+ V+GP + +STYC Q A+ R VQV+N+DPA Y DIR+ I ++++
Sbjct: 4 YAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 63 MSEQHL--GPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSAL 120
M + L GPNGGL++ +E + D L E Y++FDCPGQ+EL+TH +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWL---ENCLGHVEDDYILFDCPGQIELYTHLPVM 120
Query: 121 FKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDML 180
++ ++LE+ + R+C V L+D ++ +++S +L AL +M+ +++P +N+ +K+D+L
Sbjct: 121 KQLVQQLEQ-WEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLL 179
Query: 181 KGYGELPFRLDYFTEVQELE-YLNP----LIEKEGSGVLGRKYSRLTETIGEMVSDFNLV 235
+ +E+E +L+P L+E S + +K+ +LT+ I ++ D+++V
Sbjct: 180 SKKAK-----------KEIEKFLDPDMYSLLEDSTSDLRSKKFKKLTKAICGLIDDYSMV 228
Query: 236 SFEVLAIDDKQSMINLQSVIDKANGY 261
F D++SM + ID A Y
Sbjct: 229 RFLPYDQSDEESMNIVLQHIDFAIQY 254
>Hs14149629 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 374
Score = 99.8 bits (247), Expect = 5e-21
Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Query: 2 PFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEE 61
P +V+G GSGK+T+ + +A G VIN+DPA H +P+P ++DIRD + +E
Sbjct: 19 PVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKE 78
Query: 62 IMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALF 121
+M + LGPNGG++ ++ D +++ Q Y++ D PGQ+E+FT +++
Sbjct: 79 VMKQYGLGPNGGIVTSLNLFATRFDQ-VMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGT 137
Query: 122 KIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLK 181
I + L V+ ++D T+P ++S +L A + LP I V +K D++
Sbjct: 138 IITEALASSFP--TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIID 195
Query: 182 GYGELPFRLDY--FTEV--QELEYLNPLIEKEGSGVLGRKYSRL 221
+ + D+ F + QE Y++ L + S VL YS L
Sbjct: 196 HSFAVEWMQDFEAFQDALNQETTYVSNL-TRSMSLVLDEFYSSL 238
>SPBC119.15 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 367
Score = 97.8 bits (242), Expect = 2e-20
Identities = 69/243 (28%), Positives = 123/243 (50%), Gaps = 18/243 (7%)
Query: 2 PFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEE 61
P IV+G GSGK+T+ + ++ + ++N+DPA LPY ++DIRD I +E
Sbjct: 8 PCAIIVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIRDTINYKE 67
Query: 62 IMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQ--EEKA----YLVFDCPGQVELFT 115
+M + +LGPNGG+M S++LF+ + +++ E++A +++ D PGQ+E+F
Sbjct: 68 VMKQYNLGPNGGIM-------TSLNLFVTKFDQVLKILEKRAPTVDHILIDTPGQIEIFQ 120
Query: 116 HNSALFKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFS 175
+++ I L C+ ++D TS S ++S +L A + LP I V++
Sbjct: 121 WSASGSIICDTLASSWP--TCIAYVVDTPRATSTSTWMSSMLYACSMLYKAKLPLIIVYN 178
Query: 176 KIDMLKGYGELPFRLDYFTEVQELEYLNPLIEKEG--SGVLGRKYSRLTETIGEMVSDFN 233
K D+ + D F E Q+ + + EG SG +G + ++ + E +
Sbjct: 179 KCDVQDSEFAKKWMTD-FEEFQQAVTKDEGMSSEGATSGYMGSLVNSMSLMLEEFYRHLD 237
Query: 234 LVS 236
VS
Sbjct: 238 FVS 240
>CE01182 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 355
Score = 97.1 bits (240), Expect = 3e-20
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 6 IVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEIMSE 65
+V+G GSGK+T+ + F +A VIN+DPA ++PYP +VDIRD + +E+M E
Sbjct: 34 LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKE 93
Query: 66 QHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALFKIFK 125
+GPNG +M + + D ++++ + + + + D PGQ+E FT +++ I
Sbjct: 94 FGMGPNGAIMTCLNLMCTRFDK-VIELINKRSSDFSVCLLDTPGQIEAFTWSASGSIITD 152
Query: 126 RLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKGYGE 185
L V+ ++D T+P+ ++S +L A + LP I VF+K D++K
Sbjct: 153 SLASSHP--TVVMYIVDSARATNPTTFMSNMLYACSILYRTKLPFIVVFNKADIVKPTFA 210
Query: 186 LPFRLDY--FTEVQE---LEYLNPL 205
L + D+ F E E Y+N L
Sbjct: 211 LKWMQDFERFDEALEDARSSYMNDL 235
>ECU06g1300 [R] KOG1533 Predicted GTPase
Length = 266
Score = 95.9 bits (237), Expect = 8e-20
Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 1 MPFGQIVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDY---- 56
M + +++IGPP SGKSTY + R+ +N+DP N C+ DY
Sbjct: 1 MKYAEVIIGPPSSGKSTYVMSKKAVLSH--RNPYTVNLDPGN------CNDGQFDYSICS 52
Query: 57 ITLEEIMSEQH-LGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFT 115
I+ E+H +GPN +E ID F + ++ Y++FD PGQVE F
Sbjct: 53 ISSSLKYQEKHGVGPNMSAKCVLEEFAAGIDEFF---RENIENTDHYVLFDFPGQVEFFM 109
Query: 116 HNSALFKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFS 175
+ I + L + + VVNL D ++ ++ +S L++ + +++ +NV S
Sbjct: 110 SSDIPNGILRYLRSN-GYSVVVVNLTDLVFFSNDHSLLSSYLVSTLCLCLLESAQVNVIS 168
Query: 176 KIDMLKGYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDFNLV 235
K D K E+ L+ E+ LE L ++K+G +L E + + L+
Sbjct: 169 KCDNWKKL-EMKHSLE---EIASLECLED-VQKKG---------KLHEEMVLFIQSQGLL 214
Query: 236 SFEVLAIDDKQSMINLQSVIDKANGYIF 263
S+EVL D+ S++NLQ ID+A+G F
Sbjct: 215 SYEVLDYDNTDSVLNLQITIDRASGLFF 242
>YJR072c [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 385
Score = 89.0 bits (219), Expect = 9e-18
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 15/232 (6%)
Query: 6 IVIGPPGSGKSTYCHGCSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEIMSE 65
I IG GSGK+T+ + A VIN+DPA R+PY ++DIRD I +++M
Sbjct: 7 ICIGMAGSGKTTFMQRLNSHLRAEKTPPYVINLDPAVLRVPYGANIDIRDSIKYKKVMEN 66
Query: 66 QHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEK---AYLVFDCPGQVELFTHNSALFK 122
LGPNG ++ ++ + ID Q+ LV+++K + D PGQ+E F +++
Sbjct: 67 YQLGPNGAIVTSLNLFSTKID----QVIRLVEQKKDKFQNCIIDTPGQIECFVWSASGAI 122
Query: 123 IFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKG 182
I + + ++D +SP+ ++S +L A + LP I VF+K D+ K
Sbjct: 123 ITESFASSFP--TVIAYIVDTPRNSSPTTFMSNMLYACSILYKTKLPMIVVFNKTDVCKA 180
Query: 183 YGELPFRLDYFTEVQELE-YLNPLIEKEGSGVLGRKY-SRLTETIGEMVSDF 232
F ++ T+ + + + + G LG Y S L ++ M+ +F
Sbjct: 181 ----DFAKEWMTDFESFQAAIKEDQDLNGDNGLGSGYMSSLVNSMSLMLEEF 228
>At4g21800 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 379
Score = 86.3 bits (212), Expect = 6e-17
Identities = 58/208 (27%), Positives = 107/208 (50%), Gaps = 14/208 (6%)
Query: 6 IVIGPPGSGKSTYCHG--CSQFFNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEEIM 63
IV+G GSGK+++ H C F + H V+N+DPA LP+ ++DIRD + +E+M
Sbjct: 45 IVVGMAGSGKTSFLHRLVCHTFDSK--SHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVM 102
Query: 64 SEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALFKI 123
+ +LGPNGG++ ++ D + I+ ++ Y++ D PGQ+E+FT +++ I
Sbjct: 103 KQYNLGPNGGILTSLNLFATKFDEVVSVIEKRA-DQLDYVLVDTPGQIEIFTWSASGAII 161
Query: 124 FKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLKGY 183
+ V ++D +SP ++S +L A + LP + F+K D+
Sbjct: 162 TEAFASTFP--TVVTYVVDTPRSSSPITFMSNMLYACSILYKTRLPLVLAFNKTDV---- 215
Query: 184 GELPFRLDYFTEVQELEYLNPLIEKEGS 211
+ F L++ +++ E I+ + S
Sbjct: 216 ADHKFALEW---MEDFEVFQAAIQSDNS 240
>7290105 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 382
Score = 84.3 bits (207), Expect = 2e-16
Identities = 68/231 (29%), Positives = 109/231 (46%), Gaps = 23/231 (9%)
Query: 6 IVIGPPGSGKSTYCHGCSQF----FNAIGRHVQVINMDPANHRLPYPCSVDIRDYITLEE 61
+V+G GSGK+T+ Q FN V+N+DPA +PY VDIRD + E
Sbjct: 27 LVLGMAGSGKTTFTQKLIQHAQEKFNPY-----VVNLDPACREVPYAAHVDIRDTVNYRE 81
Query: 62 IMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQEEKAYLVFDCPGQVELFTHNSALF 121
+M + LGPNGG++ A+ + F ++ + + V D PGQ+E+F +++
Sbjct: 82 VMKQYQLGPNGGIVTALNMFTTKMAQFAELVRRAGERGHKWCVIDTPGQIEVFNWSASGS 141
Query: 122 KIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVFSKIDMLK 181
I + L VV ++D P+ ++S +L A + LP + +KID LK
Sbjct: 142 IITEGLATMFP--TIVVYVMDVERSACPTTFMSNMLYACSILYKTRLPFLVALNKID-LK 198
Query: 182 GYGELPFRLDYFTEVQELEYLNPLIEKEGSGVLGRKYSRLTETIGEMVSDF 232
G F +D+ T+ + + E+E S V S LT T+ + F
Sbjct: 199 DCG---FVMDWMTDFEAFQEAQ---EEEHSFV-----SNLTRTMSLTLDTF 238
>ECU02g1430 [L] KOG1532 GTPase XAB1 interacts with DNA repair protein XPA
Length = 270
Score = 77.0 bits (188), Expect = 4e-14
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 20/185 (10%)
Query: 6 IVIGPPGSGKSTYCHGCSQFFN----------AIGRHVQVINMDPANHRLPYPCSVDIRD 55
+V+G GSGK+T+C + + + + IN+DPA P ++DIRD
Sbjct: 20 VVVGMAGSGKTTFCQRLYSWISQDECRIDAATGLNASIYSINLDPAVVNAKMPLNLDIRD 79
Query: 56 YITLEEIMSEQHLGPNGGLMYAIESLNESIDLFILQIKSLVQE-EKAYLVFDCPGQVELF 114
+ E M + LGPNGG + ++LF+L I + + + Y++ D PGQ+E F
Sbjct: 80 VVDYHETMEKYELGPNGG-------ITTCLNLFLLNIGTYIDRIVEEYVIVDTPGQIEAF 132
Query: 115 THNSALFKIFKRLEKDLDIRLCVVNLIDCIYITSPSQYVSILLLALRSMLMMDLPHINVF 174
T +S + + + L+ D+ L V +D + + ++S ++ A M ++ + +F
Sbjct: 133 TWSSPGYVLIETLKTIGDVIL--VYTVDSLSSHKHAVFMSNMMYAASLMCRYEVETLCLF 190
Query: 175 SKIDM 179
+K D+
Sbjct: 191 NKKDL 195
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,428,205
Number of Sequences: 60738
Number of extensions: 913968
Number of successful extensions: 4865
Number of sequences better than 1.0e-05: 22
Number of HSP's better than 0.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4795
Number of HSP's gapped (non-prelim): 24
length of query: 347
length of database: 30,389,216
effective HSP length: 107
effective length of query: 240
effective length of database: 23,890,250
effective search space: 5733660000
effective search space used: 5733660000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)