ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2517 good S KOG4356 Function unknown Uncharacterized conserved protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII2517 886032 885034 -333 
         (333 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YHR034c [S] KOG4356 Uncharacterized conserved protein                 231   9e-61
7304153 [S] KOG4356 Uncharacterized conserved protein                  68   2e-11
Hs8923598 [S] KOG4356 Uncharacterized conserved protein                54   4e-07

>YHR034c [S] KOG4356 Uncharacterized conserved protein
          Length = 344

 Score =  231 bits (590), Expect = 9e-61
 Identities = 138/352 (39%), Positives = 196/352 (55%), Gaps = 32/352 (9%)

Query: 3   FLLRPLND---------XXXXXXXXVIRISPEPCFVVKSKVINP-GTTSLSSNAKIFINI 52
           FLLRP+                   V +I P   FV+K+K+++  G   L    K+FIN+
Sbjct: 4   FLLRPIKQRHRNEDKYVSVDAADGSVSKIEPIADFVIKTKLLSANGPEKLQDGRKVFINV 63

Query: 53  CHNDQIPLPEIDFNPAIVYPLIINNQWEIPIVTSSIREDVDKKGNVCYVSDCCINTKCVS 112
           CH+  +P PE+DFN  IV+PLII N+WEIPI+TS  R D DKKG  CYV DCCIN+ C  
Sbjct: 64  CHSPLVPKPEVDFNARIVFPLIIQNEWEIPIITSCYRMDHDKKGQECYVWDCCINSDCSR 123

Query: 113 WIQHDLQLREIVVEWCLESCELRAELEISRDNISFPKLKKKGDTIPELEILREDLTENYE 172
           WI  D+QLREI+VEWCLESCE+R  + + RD I+FPK+KKKG  +P LE+L ++L ++Y+
Sbjct: 124 WICDDIQLREILVEWCLESCEIRDSVVLCRDRIAFPKMKKKGAELPALEVLNDELHQDYK 183

Query: 173 ETINDLVNREQKEPVSIIEKRRDFLAE-DEPSTGELPPLIPIDQS-SRRKPLIEEIE--- 227
             ++ ++  E  +P+SI+  R D   + ++P  G LPPL PI+   S  K  IEEI+   
Sbjct: 184 AKMHKIIEEEAGDPMSILRGRNDDGDDNNDPDDGTLPPLFPIENKISGAK--IEEIDKNE 241

Query: 228 ----DLSLHETKKPKVEEIQKKSISYELSMGKPKDTSEFLLKIEVTSELNSSLD-YNIKY 282
               +L       P   E Q+    YE+ M + K  +  L  +      NS  D ++  Y
Sbjct: 242 IAHRNLKQAPAPAPAPHEQQEDVPEYEVKMKRFKGAAYKLRILIENKAPNSKPDRFSPSY 301

Query: 283 DAKSNKLIIKNTNLGIYPEKKLKVPLP-DIFNNPPKLECFFVKPERRLIIFL 333
           +   N L I           KL +PLP DI  N   ++ F ++ ER L I++
Sbjct: 302 NFAENILYING---------KLSIPLPRDIVVNAADIKIFHIRKERTLYIYI 344


>7304153 [S] KOG4356 Uncharacterized conserved protein
          Length = 834

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 41/263 (15%)

Query: 22  ISPEPCFVVKSKVINPGTTSLSSNAKIFINI--CHNDQIPLPEIDFNPAIVYPLIINNQW 79
           I P+P FV+K        T+L    K FINI  C   Q P  E+  +P+     +    W
Sbjct: 76  IHPKPGFVIK--------TALDGELKCFINIASCEEIQRPKNEVATDPSSGSRGL---SW 124

Query: 80  EIPIVTSSIREDVDKKGNVCYVSDCCINTKCVSWIQHDLQLREIVVEWCLESCELRAELE 139
            IP+  ++ R+D D K N C V D   +   +     + Q R+ +++  L++ E   ++ 
Sbjct: 125 SIPMAQTTSRDDFDAKNNHCKVFDVVFHPDALHLAMRNKQFRQCLIDTALDAIEREYKVS 184

Query: 140 ISRDNISFPKLKKKGDTIPELEILREDLTENYEETINDLVNREQKEPVSIIEKRRDFLAE 199
           + R N+ FPKL  KG  IP   ++R+         + D    E++EP  +          
Sbjct: 185 LDRANLKFPKLDYKG--IPRPTVIRK---------MADNPTAEEQEPHPLAH----MFPT 229

Query: 200 DEPSTGELPPLI--------PIDQSSRRKPLIEEIEDLSLHE---TKKPKVEEIQKKSIS 248
             P+ G+  P +        P+ + +  +  I+   D+ L E       K+     +S+ 
Sbjct: 230 KPPAPGKQEPRVLPMKTKPSPVPEFTVPRYTIKHSHDVDLSEYTDELDAKLHVTVPRSLV 289

Query: 249 YELSMGKPKDTSEFLLKIEVTSE 271
            E+ +   + T+E   +++VTS+
Sbjct: 290 VEIELPLLRSTAE--CQLDVTSK 310


>Hs8923598 [S] KOG4356 Uncharacterized conserved protein
          Length = 290

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 12/123 (9%)

Query: 21  RISPEPCFVVKSKVINPGTTSLSSNAKIFINICHNDQIPLPEIDFNPAIVYPLIINNQ-- 78
           +I P+P F +K+          SS  K+FINICH+  IP P  D     +  ++  +Q  
Sbjct: 47  QIQPQPGFCIKTN---------SSEGKVFINICHSPSIP-PPADVTEEELLQMLEEDQAG 96

Query: 79  WEIPIVTSSIREDVDKKGNVCYVSDCCINTKCVSWIQHDLQLREIVVEWCLESCELRAEL 138
           + IP+       ++D KG  C   D  +N+     +Q+   LRE+V+    E  E +  L
Sbjct: 97  FRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGLEDKYNL 156

Query: 139 EIS 141
           +++
Sbjct: 157 QLN 159


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.317    0.138    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,275,737
Number of Sequences: 60738
Number of extensions: 985788
Number of successful extensions: 3418
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3414
Number of HSP's gapped (non-prelim): 3
length of query: 333
length of database: 30,389,216
effective HSP length: 107
effective length of query: 226
effective length of database: 23,890,250
effective search space: 5399196500
effective search space used: 5399196500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)