ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2533 good C KOG1662 Energy production and conversion Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2533 890604 891221 206
(206 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR298c [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP... 234 6e-62
SPCC1840.06 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit ... 148 4e-36
7299984 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP... 134 9e-32
CE09719 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP... 125 5e-29
Hs4502303 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OS... 119 2e-27
At5g13450 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OS... 104 1e-22
At4g09650 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OS... 66 3e-11
>YDR298c [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5
Length = 212
Score = 234 bits (597), Expect = 6e-62
Identities = 125/212 (58%), Positives = 164/212 (76%), Gaps = 6/212 (2%)
Query: 1 MFSRVFVRSMAAS-----AKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNAL 55
MF+RVF RS A+S +KA PPV+LFG++GTYATAL+ AA+K +S++AA SL +
Sbjct: 1 MFNRVFTRSFASSLRAAASKAAAPPPVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKV 60
Query: 56 KETVAKDTKLTSILENPALSAEDRNIVVDTLSKKI-NLDQSVQNLLKVLAENNRLSLLEH 114
+ TV K+ KL +L NPALS +DRN V+D + + NLD V NLLKVL+ENNRL E
Sbjct: 61 ESTVKKNPKLGHLLLNPALSLKDRNSVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEK 120
Query: 115 VTSQFSKLTDAYHGLVQATVTTAQPLDSKLFKRVEKALAASSLVGKGKSLKLENVVKPEI 174
+ S F L DA++GL++ TVT+A+PLD K FKR+EKAL+AS LVG+GKSLKLENVVKPEI
Sbjct: 121 IASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEI 180
Query: 175 QGGLIVEVSDRTVDLSIASRINKLNQVLREAI 206
+GGLIVE+ D+TVDLSI+++I KLN+VL ++I
Sbjct: 181 KGGLIVELGDKTVDLSISTKIQKLNKVLEDSI 212
>SPCC1840.06 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5
Length = 216
Score = 148 bits (374), Expect = 4e-36
Identities = 82/200 (41%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 7 VRSMAASAKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDTKLT 66
+RS+A +A A PPVQL+GLDG+YA++L+TAA K + ++ +LN L + + +
Sbjct: 20 IRSLA-TATASAHPPVQLYGLDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFE 78
Query: 67 SILENPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLTDAY 126
+ +P L+ ED+ I+V +L++ + ++N VL +N+RL LL + QFS L A
Sbjct: 79 QYISSPWLTREDKKILVSSLTQMTGNEPLLKNFYNVLLDNHRLYLLTRIQKQFSTLMRAK 138
Query: 127 HGLVQATVTTAQPLDSKLFKRVEKALAASSLVGKGKSLKLENVVKPEIQGGLIVEVSDRT 186
G ++ +T+A PLDSK+ R+E +A S GKGK L + N V P I GGLIVE+ D
Sbjct: 139 RGEIEVKITSATPLDSKILSRLESRIAKSK-YGKGK-LLVSNKVTPSIIGGLIVEIGDNI 196
Query: 187 VDLSIASRINKLNQVLREAI 206
+D+S+ SR+N LN++L E I
Sbjct: 197 LDVSVGSRLNNLNKLLSEPI 216
>7299984 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5
Length = 209
Score = 134 bits (337), Expect = 9e-32
Identities = 75/195 (38%), Positives = 119/195 (60%), Gaps = 2/195 (1%)
Query: 11 AASAKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDTKLTSILE 70
+A+A+A VKPPVQ+FGL+G YATAL++AASK + ++ L AL+ T+ D KL +
Sbjct: 16 SAAAQATVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTALQATIRSDKKLREYVT 75
Query: 71 NPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLTDAYHGLV 130
+P ++ + + S+K+ + NLL +LA+N RL L+ V + + + A+ G V
Sbjct: 76 SPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINAYKTIMAAHRGEV 135
Query: 131 QATVTTAQPLDSKLFKRVEKALAASSLVGKGKSLKLENVVKPEIQGGLIVEVSDRTVDLS 190
V TA+PLD+ K++E AL S + +SLK+ + V P I GGLIV + D+ VD+S
Sbjct: 136 VCEVVTAKPLDASQSKQLEGAL--KSFLKGNESLKITSRVDPSIIGGLIVSIGDKYVDMS 193
Query: 191 IASRINKLNQVLREA 205
IA+++ V++ A
Sbjct: 194 IATKVKLYTDVIQTA 208
>CE09719 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5
Length = 207
Score = 125 bits (313), Expect = 5e-29
Identities = 74/207 (35%), Positives = 112/207 (53%), Gaps = 4/207 (1%)
Query: 1 MFSRVFVRSMAASAKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVA 60
+ R F S A + VK P+Q+ G++G YA AL++A K ++ ++ LN ++
Sbjct: 4 LMKRGFSTSAALAKAQLVKTPIQVHGVEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYK 63
Query: 61 KDTKLTSILENPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFS 120
+ K + +P L A + ++ +S K+ L + N L +LAEN RL+ LE V S F
Sbjct: 64 DNKKFQEFVLDPTLKANKKKTAIEAISTKLGLTKETGNFLGLLAENGRLNKLESVVSSFE 123
Query: 121 KLTDAYHGLVQATVTTAQPLDSKLFKRVEKALAASSLVGK-GKSLKLENVVKPEIQGGLI 179
+ A+ G + VT+A+ L S K + AL S +GK G+ L + VKP I GGL+
Sbjct: 124 SIMRAHRGELFVQVTSAEELSSSNQKALSDAL---SKIGKSGQKLTVTYAVKPSILGGLV 180
Query: 180 VEVSDRTVDLSIASRINKLNQVLREAI 206
V + D+ VDLSIASR+ K L AI
Sbjct: 181 VTIGDKYVDLSIASRVKKYKDALATAI 207
>Hs4502303 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5
Length = 213
Score = 119 bits (299), Expect = 2e-27
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 3/203 (1%)
Query: 4 RVFVRSMAASAKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDT 63
R F S+ V+PPVQ++G++G YATAL++AASK +E L + + + K+
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQ-ILKEP 72
Query: 64 KLTSILENPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLT 123
K+ + + NP + + ++ ++ K NL+ +LAEN RLS + V S FS +
Sbjct: 73 KVAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMM 132
Query: 124 DAYHGLVQATVTTAQPLDSKLFKRVEKALAASSLVGKGKSLKLENVVKPEIQGGLIVEVS 183
+ G V TVT+A PL+ ++ L S + +G+ LKLE P I GG+IV +
Sbjct: 133 SVHRGEVPCTVTSASPLEEATLSELKTVL--KSFLSQGQVLKLEAKTDPSILGGMIVRIG 190
Query: 184 DRTVDLSIASRINKLNQVLREAI 206
++ VD+S+ ++I KL + +RE +
Sbjct: 191 EKYVDMSVKTKIQKLGRAMREIV 213
>At5g13450 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5
Length = 238
Score = 104 bits (259), Expect = 1e-22
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 11 AASAKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDTKLTSILE 70
+A A VK P+ L G +G +A+ L+ AA K S+E + L+ + E + +
Sbjct: 40 SAQTTANVKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTK 99
Query: 71 NPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLTDAYHGLV 130
+P++ R + + + +N L +LAEN +L L+ + +F +LT+A+ G V
Sbjct: 100 DPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDV 159
Query: 131 QATVTTAQPLDSKLFKRVEKALAASSLVGKGKSLKLENVVKPEIQGGLIVEVSDRTVDLS 190
+ VTT PL K + + L ++G GK + +E + P I GGLIVE + +D+S
Sbjct: 160 KVLVTTVIPLPPAEEKELTETL--QEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMS 217
Query: 191 IASRINKLNQVLREAI 206
I +R ++ ++LRE +
Sbjct: 218 IRTRAQQMERLLREPV 233
>At4g09650 [C] KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5
Length = 234
Score = 66.2 bits (160), Expect = 3e-11
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 30 TYATALFTAASKTTSVEAAASSLNALKETVAKDTKLTSILENPALSAEDRNIVVDTLSKK 89
+YA AL A + ++E + + L E V D ++ + NP ++ E + V+D + K
Sbjct: 54 SYAMALADVAKRNDTMELTVTDIEKL-EQVFSDPQVLNFFANPTITVEKKRQVIDDIVKS 112
Query: 90 INLDQSVQNLLKVLAENNRLSLLEHVTSQF----SKLTDAYHGLVQATVTTAQPLDSKLF 145
+L N L VL + NR++++ + +F +KLTD V++ V P +++
Sbjct: 113 SSLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQIA 172
Query: 146 KRVEKALAASSLVGKGKSLKLENVVKPEIQGGLIV---EVSDRTVDLSIASRINKL 198
K+V+K A K+++++ V+ + G + E + +D+S+ ++ +
Sbjct: 173 KQVQKLTGA-------KNVRVKTVIDASLVAGFTIRYGESGSKLIDMSVKKQLEDI 221
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.312 0.127 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,907,663
Number of Sequences: 60738
Number of extensions: 291475
Number of successful extensions: 1149
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1132
Number of HSP's gapped (non-prelim): 7
length of query: 206
length of database: 30,389,216
effective HSP length: 101
effective length of query: 105
effective length of database: 24,254,678
effective search space: 2546741190
effective search space used: 2546741190
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)