ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2548 good U KOG1986 Intracellular trafficking, secretion, and vesicular transport Vesicle coat complex COPII, subunit SEC23
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2548 895022 897007 662
(662 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR035w [U] KOG1986 Vesicle coat complex COPII subunit SEC23 159 2e-38
YPR181c [U] KOG1986 Vesicle coat complex COPII subunit SEC23 96 2e-19
7296699 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 94 9e-19
At2g21630 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 90 1e-17
SPCC31H12.07 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 88 4e-17
At4g14160 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 86 1e-16
SPBC776.04 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 83 2e-15
Hs5454042 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 82 3e-15
At3g23660 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 81 6e-15
CE27230 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 80 1e-14
Hs14591924 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 79 3e-14
At1g05520 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 74 5e-13
At5g43670 [U] KOG1986 Vesicle coat complex COPII subunit SEC23 64 1e-09
>YHR035w [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 630
Score = 159 bits (401), Expect = 2e-38
Identities = 170/678 (25%), Positives = 293/678 (43%), Gaps = 102/678 (15%)
Query: 34 ICEP-DLTIDGNSSLASSENYTN---CKICGGFANFLCSRDSRAGWFCSFCNAYNELGNI 89
+C P + + SS A ++NY C CG + + CS + W C FCN N +
Sbjct: 1 MCSPTNFLYEPFSSDAVTQNYDQNLKCTKCGAYYSMACSLREQNVWTCLFCNQSNSNAEL 60
Query: 90 PLSSSYLKHLGTAAVPTHSKFAI-IIDLNCEFEENLDALKMLQFGSV----QSLALITI- 143
PL S L +A S+ I IID C+ E + +L + + L++ITI
Sbjct: 61 PLVPSNTYTLTSAKKEILSRRTIMIIDAICDPHELNYLVSILCNNYITRQQEPLSIITIQ 120
Query: 144 EDGSVTIHTDGSH---ITVDAESSSCISHLKKLDTEWFIAKYGLLVRK-IWTDQISFGA- 198
+ G V +H +H +L KL+ +F K + ++ W D+ + G+
Sbjct: 121 QSGHVILHNAVNHRRDAVFSINEFMTKYNLDKLNASYFEKKISEINQESYWFDKSTQGSL 180
Query: 199 -KLAELLCQRTR----SKKRCRRNTALAIFLAQCLNPSQS-------IAFVFGPCTVAPG 246
KL +C+ S KR +R T LA+F++ L S ++F+ GPCT G
Sbjct: 181 RKLLREICKIANKVNISSKRDKRCTGLALFVSSVLASQCSLSAYCHIVSFLNGPCTKGGG 240
Query: 247 KVISMDRKNHIRQHRNIE-EDKDVKYWKPSREFYNKMSKSLKFAPCTV----FVASMDQV 301
KV+S +R +RQ+ + E + ++ K +FY KM + KFA ++ F+AS+DQ+
Sbjct: 241 KVMSRERGESMRQNHHFESKSSQLQLSKSPTKFYKKMLE--KFANQSLIYEFFIASLDQI 298
Query: 302 GIWEMRSCLNNFI---QYESFNDRNFIYDWQAYI---QGKGCYEITRIVIKTSNKLLLNG 355
GI EM + + + Q++SFND F +Q Y+ Y ++ N +++
Sbjct: 299 GILEMSPLITSSMAVSQFDSFNDERFAMSFQKYLNLRDHNAIYNCHSKIMTAKNAIVVKD 358
Query: 356 IFGPVSSLKDKDTHVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTSRSAAEALQEMP 415
P SL K+ + + ++AEA
Sbjct: 359 F--PKYSLNPKNLSLP---------------------------LEISLGHNSAEA----- 384
Query: 416 DKFSFQMECYYKHLNQEYVSVETKFIPSTTLPGEHLLTQNFHWDIMAGSIMKKISFAVLF 475
Q + +++ ++Y+ +ET +P ++F MKKI+ ++
Sbjct: 385 ---PIQFQTTFENQTEKYIRIETLLLPKA--------NRSFGAQNEIVFSMKKIASRIID 433
Query: 476 QGKFYDYDLRWWTLEIVKLLKSLNAIDVPGIKSLQEVTYFMQRSTLLRKRNTSPDEWIVY 535
+ + ++ L + DV + +Q Y + RS +L RNTSPDE ++
Sbjct: 434 SFAYSSKHTKELMKQLFLLPNQIRGKDVDMVNLIQ-WCYHIYRSPILSVRNTSPDERYLF 492
Query: 536 HWTILNSPLSHIFKMVRPQVYSTTGL----------IQNTTDILNYAEPLLVDGGNVLVV 585
I+N+ + +P ++S + L + + + + VDGG+ LV+
Sbjct: 493 LHRIINASKDTCLSLCKPFIWSYSDLKHDWIVLDVPLTRAQILQDDKTTICVDGGSYLVL 552
Query: 586 RDTSVGDSRVDSLKAAADTIYHDGSRFPKPWYRETKPGASQDRFV---IARLGLTAEHSL 642
R + + L + +D RFP+P Y ETK G SQDRF+ I L +T + +L
Sbjct: 553 RRGKLLEKEGREL---CCKLLNDLQRFPQPLYVETKTGGSQDRFLKSKIIPLDITDKETL 609
Query: 643 HSDDLTLDKYMALFKSKS 660
++D+T ++Y LF S
Sbjct: 610 GTEDMTFNEYFNLFTDLS 627
>YPR181c [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 768
Score = 95.5 bits (236), Expect = 2e-19
Identities = 158/711 (22%), Positives = 284/711 (39%), Gaps = 131/711 (18%)
Query: 59 CGGFANFLCSRDSR-AGWFCSFCNAYNELG---------NIPLS--SSYLKHLGTAAVPT 106
C N C D R + W C CN+ N L N+PL S+ ++++ V
Sbjct: 61 CKSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNKPVTV 120
Query: 107 HSKFAIIIDLNCEFEENLDALKMLQFGSVQSL---ALI-TIEDGSVTIHTDGSHITVD-- 160
F ++DL E ENLD+LK S+ L ALI I G+V D S T+D
Sbjct: 121 PPIFFFVVDLTSE-TENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRC 179
Query: 161 -----------------------AESSSCISHLKKLDTEWFIAKYGLLVRKIWTDQISFG 197
SHL + + + L + +Q+ F
Sbjct: 180 NVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNK--VTPFSLNRFFLPLEQVEF- 236
Query: 198 AKLAELLCQRTRSK------KRCRRNTALAIFLAQCLN-------PSQSIAFVFGPCTVA 244
KL +LL + + R R T A+ +A L P++ I F GP TVA
Sbjct: 237 -KLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVA 295
Query: 245 PGKVISMDRKNHIRQHRNIEEDKDVKYWKPSREFYNKMSKSLKFAPCTV--FVASMDQVG 302
PG +++ + K+ +R H +I+ D +++K + +FYN++++ + TV F DQ+G
Sbjct: 296 PGLIVNSELKDPLRSHHDIDSD-HAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIG 354
Query: 303 IWEMRSCLNN----FIQYESFND--------RNFIYDWQAYIQGKGCYEITRIVIKTSNK 350
+ EM+ ++ + ++F+ R F D + Y+ K + + +KTS
Sbjct: 355 MSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYL--KMAFN-GNMAVKTSKD 411
Query: 351 LLLNGIFGPVSSLKDKD-THVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTSRSAAE 409
L + G+ G S++K D ++S++ G G + T++ +T+ + +
Sbjct: 412 LKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAAN-SN 470
Query: 410 ALQEMPDKFSFQMECYYKHLNQEYVSVETKFIPSTTLPGEHLLTQNFHWDIMAGSIMKKI 469
+ P Y + + S T I TT+ + L F +A S ++
Sbjct: 471 PMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLL---PFGTPAIAASFDQEA 527
Query: 470 SFAVLFQGKFYDYD-------LRWWTLEIVKLLK---SLNAID------VPGIKSLQEVT 513
+ ++ + + + +RW ++KL + N D P + T
Sbjct: 528 AAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFT 587
Query: 514 YFMQRSTLLRKRNTSPDEWIVYHWTILNSPLSHIFKMVRPQVYS-------------TTG 560
Y+++RS L N SPDE Y ++ M++P + S +
Sbjct: 588 YYLRRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSIS 647
Query: 561 LIQNTTDILN-YAEPLLVDGGNVLVVRDTSVGD--------SRVDSLKAAADTIYHDGSR 611
+ NT +L+ + L+ G + R D + ++ K A + D R
Sbjct: 648 VKPNTILLLDTFFFILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVD--R 705
Query: 612 FPKPWYRETKPGASQDRFVIARLGLTAEHS---------LHSDDLTLDKYM 653
FP P + +T+ G SQ RF++++L + + + +DD++L +M
Sbjct: 706 FPLPRFIDTEAGGSQARFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFM 756
>7296699 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 757
Score = 93.6 bits (231), Expect = 9e-19
Identities = 158/701 (22%), Positives = 274/701 (38%), Gaps = 119/701 (16%)
Query: 59 CGGFANFLCSRDSRAG-WFCSFCNAYNEL-------------GNIPLSSSYLKHLGTAAV 104
C N LC D RA W C+FC N + S +++ T A
Sbjct: 66 CRAILNPLCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPGFSTIEYTITRAP 125
Query: 105 PTHSKFAIIIDLNCEFEENLDALKMLQFGSVQSLALITIEDGSVTIHTDGSHITV-DAES 163
F ++D C EE LDALK S+Q + + V + T G I V + +
Sbjct: 126 TMPPVFIFLVD-TCMDEEELDALK----DSLQMSLSLLPTNALVGLITFGKMIQVHELGA 180
Query: 164 SSCISHLKKLDTEWFIAKYGL-------------------LVRKIWTDQISFGAKLAELL 204
C T+ AK ++ I + G L+EL
Sbjct: 181 EGCSKSYVFRGTKDLTAKQQQQHLPGQPAGAAAPVPPAHRFLQPIGQCDAALGDLLSEL- 239
Query: 205 CQR----TRSKKRCRRNT----ALAIFLAQCLNPSQS---IAFVFGPCTVAPGKVISMDR 253
QR KR R+T ++A+ L +C P+ + FV GPC+ PG+V+ +
Sbjct: 240 -QRDPWPVPQGKRYLRSTGAALSIAVGLLECTYPNTGGRIMTFVGGPCSQGPGQVVDDEL 298
Query: 254 KNHIRQHRNIEEDKDVKYWKPSREFYNKMS--KSLKFAPCTVFVASMDQVGIWEMRSCLN 311
K+ IR H +I +D +V++ K + + Y+ ++ + ++ ++DQ G+ EM+ N
Sbjct: 299 KHPIRSHHDIHKD-NVRFMKKAIKHYDALALRAATNGHSVDIYSCALDQTGLLEMKQLCN 357
Query: 312 ----NFIQYESFNDRNFIYDWQAYIQGKGCYEI-----TRIVIKTSNKLLLNGIFGPVSS 362
+ + +SFN F +Q G ++ + +K S +L ++G G S
Sbjct: 358 STGGHMVMGDSFNSSLFKQTFQRVFARDGRNDLKMAFNATLEVKCSRELKISGGIGSCVS 417
Query: 363 LKDKDTHVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTSRSAAEALQEMPDKFSFQM 422
L K VSD G G T ++K ++ AA Q + Q
Sbjct: 418 LNVKSPSVSDVEIGMG--NTVQWKLCTLNPSSTVAYFFEVVNQHAAPIPQ--GGRGCIQF 473
Query: 423 ECYYKH-LNQEYVSVET---KFIPSTTLPGEHLLTQNFHWDIMAGSIMKKISF-AVLFQG 477
Y+H Q + V T + +T+ H ++ F + A + + + + A +G
Sbjct: 474 ITQYQHPSGQRRIRVTTLARNWADATS--NVHHISAGFDQEAAAVLMARMVVYRAETDEG 531
Query: 478 KFYDYDLRWWTLEIVKLLKSLNAIDVPGIKSLQ---------EVTYFMQRSTLLRKRNTS 528
LRW ++++L + S + + Y ++RS L+ N S
Sbjct: 532 PDI---LRWVDRQLIRLCQKFGEYSKDDPNSFRLSQNFSLFPQFMYHLRRSQFLQVFNNS 588
Query: 529 PDEWIVYHWTILNSPLSHIFKMVRPQVYS------------TTGLIQNTTDIL--NYAEP 574
PDE Y ++ L+ M++P +YS T IQ +L + +
Sbjct: 589 PDETTFYRHMLMREDLTQSLIMIQPILYSYSFNGPPEPVLLDTASIQADRILLMDTFFQI 648
Query: 575 LLVDGGNV-----LVVRDTSVGDSRVDSLKAAADTIYHD-GSRFPKPWYRETKPGASQDR 628
L+ G + L +D ++ L+A D +RFP P Y +T+ G SQ R
Sbjct: 649 LIYHGETIAQWRALKYQDMPEYENFKQLLQAPVDDAQEILQTRFPMPRYIDTEHGGSQAR 708
Query: 629 FVIARLGLTAEHS------------LHSDDLTLDKYMALFK 657
F+++++ + H+ + +DD++L +M K
Sbjct: 709 FLLSKVNPSQTHNNMYAYGQDGGAPVLTDDVSLQLFMEHLK 749
>At2g21630 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 761
Score = 89.7 bits (221), Expect = 1e-17
Identities = 118/502 (23%), Positives = 207/502 (40%), Gaps = 71/502 (14%)
Query: 213 RCRRNTALAIFLAQCL-------NPSQSIAFVFGPCTVAPGKVISMDRKNHIRQHRNIEE 265
R R T +A+ +A L + ++ +AF+ GP T PG ++S + + IR H++I++
Sbjct: 261 RPARCTGVALRIAASLLGACFPGSAARIMAFIGGPSTQGPGAIVSRELSDPIRSHKDIDK 320
Query: 266 DKDVKYWKPSREFYNKMSKSL--KFAPCTVFVASMDQVGIWEMRSCLNN----FIQYESF 319
D + Y K + EFY ++K L + VF +S+DQVGI E++ + + ESF
Sbjct: 321 DSAMYYHK-AVEFYEMLAKQLVHQGHVLDVFASSVDQVGIAELKVAVEQTGGFVVLAESF 379
Query: 320 NDRNFIYDWQAYIQG----KGCYEITRIVIKTSNKLLLNGIFGPVSSLKDKDTHVSDTPK 375
F + Q G I S + + GI GP +SL+ K SDT
Sbjct: 380 GHSVFRDSLKRVCQSGENDLGLSSCGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDTAI 439
Query: 376 GFGGSGTFRYKGXXXXXX--XXXXXXXVDTSRSAAEALQEMPDKFSFQMECYYKHLNQE- 432
G G + ++ G +DT A LQ ++F FQ YY+H N +
Sbjct: 440 GQGHTSAWKMCGLDNNTSICLVFEIAKIDT---ADVVLQSQSNQFYFQFLTYYQHSNGQT 496
Query: 433 ---YVSVETKFIPSTTLPGEHLLTQNFHWDIMAGSIMKKISFAVLFQGKFYDYDLRWWTL 489
++ +++ T E L+ F + A + + IS + Q +F RW
Sbjct: 497 RLRVTTLSRRWVMGTESLQE--LSNGFDQEAAAVVMARLISSKMETQPEFNPQ--RWVDK 552
Query: 490 EIVKLLKSLNAIDVPGIKSLQ---------EVTYFMQRSTLLRKRNTSPDEWIVYHWTIL 540
++ L S + + ++RS ++ N SPDE + +
Sbjct: 553 ALINLCTWFGDYQKGNPSSFSLSSQLSIFPQFVFHLRRSQFVQVFNNSPDETAYFRMILY 612
Query: 541 NSPLSHIFKMVRPQVYSTTGLIQNTTDILNYA-----EPLLVDGGNVLVV-RDTSVGDSR 594
+S+ M++P + S + +L+ A LL+D LV+ +++ R
Sbjct: 613 RENVSNSVVMIQPSLISFSFHSPPEPILLDVASIAADRILLLDSYFTLVIFHGSTIAQWR 672
Query: 595 ----------------VDSLKAAADTIYHDGSRFPKPWYRETKPGASQDRFVIARLG--- 635
+ S + ADTI + RFP P SQ RF++A+L
Sbjct: 673 KAGYHNQPEHQAFGHLLQSPRDYADTIMSE--RFPTPRLVICDQYGSQARFLLAKLNPCD 730
Query: 636 ----LTAEHSLHSDDLTLDKYM 653
+ + ++ +DD++L ++
Sbjct: 731 GDAHFSGQSNVFTDDVSLSVFL 752
>SPCC31H12.07 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 759
Score = 88.2 bits (217), Expect = 4e-17
Identities = 114/514 (22%), Positives = 208/514 (40%), Gaps = 70/514 (13%)
Query: 209 RSKKRCRR---NTALAIFLAQCLNPSQSIA-FVFGPCTVAPGKVISMDRKNHIRQHRNIE 264
R +RC N ++++ + C N I F GP TV PG V+S + + IR H +IE
Sbjct: 254 RRPQRCTGTALNISVSMMESVCPNSGGHIMLFAGGPSTVGPGTVVSTELREPIRSHHDIE 313
Query: 265 EDKDVKYWKPSREFYNKMSK--SLKFAPCTVFVASMDQVGIWEMRSCLNN----FIQYES 318
D+ K+ K + FY ++K S + +DQ+GI EM+S ++ + +S
Sbjct: 314 RDQ-AKHVKKALRFYEGLTKRVSANGHAVDILAGCLDQIGIMEMKSLASSTGGYLVLSDS 372
Query: 319 FNDRNFIYDWQAYIQGKGCYEI-----TRIVIKTSNKLLLNGIFGPVSSLKDKDTHVSDT 373
F F +Q + + + T+ +L ++G+ G SL K +V D
Sbjct: 373 FTTSIFKQSFQRIFGRDSLNNMLLGFNATMEVLTTKELKISGLIGHAVSLNKKSQNVGDI 432
Query: 374 PKGFGGSGTFRYKGXXXXXXXXXXXXXVDTSRSAAEALQEMPDKFSFQMECYYKHLNQEY 433
G G + +++ G S SA + + Q Y+H + +
Sbjct: 433 EIGLGNTNSWKMCGISPKSTYAIYFEVATQSASAPQG----DSRGLVQYLTLYQHSSNTF 488
Query: 434 VSVETKFIPSTTLPGEHLLTQNFHWDIMAGSIMKKISF-AVLFQGKFYDYDLRWWTLEIV 492
T + G L+ +F + A ++ + +F A + G LRW ++
Sbjct: 489 RLRVTTVARAFADGGSPLIVNSFDQEAAAVAMARIAAFKAEVDDGPDV---LRWTDRMLI 545
Query: 493 KLLKSLNAI--DVPGIKSLQ-------EVTYFMQRSTLLRKRNTSPDEWIVYHWTILNSP 543
KL + D P L + Y+++RS L+ N SPDE Y + +
Sbjct: 546 KLCQKFAEYRKDDPSSFRLSSQFTLYPQFMYYLRRSPFLQVFNNSPDETAFYRHMLNHED 605
Query: 544 LSHIFKMVRPQVYSTT----GLIQNTTDILNYAEP--LLVDG-GNVLVVRDTSVGDSR-- 594
+++ M++P + S + G + D ++ LL+D ++L+ ++ R
Sbjct: 606 VNNSLIMIQPTLQSFSFEHPGGVPVLLDAVSVKPDVILLLDTFFHILIFHGDTIAQWRNA 665
Query: 595 --------------VDSLKAAADTIYHDGSRFPKPWYRETKPGASQDRFVIARL------ 634
+++ + A + D RFP P + G SQ RF+++RL
Sbjct: 666 GYQNQPEYQNLKELLEAPRVEAAELLID--RFPIPRFIVCDQGGSQARFLLSRLNPSETH 723
Query: 635 ------GLTAEHSLHSDDLTLDKYMALFKSKSTA 662
G H++ +DD++L +M+ K + A
Sbjct: 724 NTTSMYGAPPAHAILTDDVSLQTFMSHLKKLAVA 757
>At4g14160 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 769
Score = 86.3 bits (212), Expect = 1e-16
Identities = 128/587 (21%), Positives = 233/587 (38%), Gaps = 99/587 (16%)
Query: 55 NCKICGGFANFLCSRDSRA-GWFCSFC-------NAYNELGNIPLSSSYLKHLGT----- 101
+CK C N D A W C FC + Y+ + I L T
Sbjct: 61 DCKTCKALLNAFARVDFAAMNWVCPFCYHRNHFPSHYHSISEINLPGELYPQYTTVEYTL 120
Query: 102 ----AAVPTHSKFAIIIDLNCEFEENLDALKMLQFGSVQSLALITIEDGSVTIHTDGSHI 157
+ VP F ++D C EE L K Q++ L+ E+ V + G+
Sbjct: 121 PPDPSRVPPPPVFVFVLD-TCMIEEELGYAKS---ALKQAIGLLP-ENALVGFVSFGTQA 175
Query: 158 TVDAESSSCISHL------KKLDTEWFIAKYGL--LVRKIWTDQISFGAK---------- 199
V S +S + K++ + + + GL R+ T S GA+
Sbjct: 176 HVHELGFSEMSKVFVFKGNKEVTKDQILDQLGLGSSSRRAPTSGFSKGAQNGFQSSGVDR 235
Query: 200 ----------LAELLCQRTRSKK-------RCRRNTALAI-----FLAQCL--NPSQSIA 235
+LL +S + R +R T +A+ L CL ++ +A
Sbjct: 236 FLLPASECEYTLDLLLDELQSDQWPVQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVA 295
Query: 236 FVFGPCTVAPGKVISMDRKNHIRQHRNIEEDKDVKYWKPSREFYNKMSKSL--KFAPCTV 293
V GPCT PG +IS D + +R H+++++D Y+K + +FY+ ++K L + +
Sbjct: 296 LVGGPCTEGPGTIISKDLSDPVRSHKDLDKDA-APYYKKAVKFYDSIAKQLVAQGHVLDL 354
Query: 294 FVASMDQVGIWEMRSCLNN----FIQYESFNDRNFIYDWQAYIQGKG-----CYEITRIV 344
F +++DQVG+ EM+ + + + ESF F ++ + C+ T +
Sbjct: 355 FASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEHSLGLCFNGT-LE 413
Query: 345 IKTSNKLLLNGIFGPVSSLKDKDTHVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTS 404
I S + + G+ GP SSL+ K +V+DT G G + ++ G T
Sbjct: 414 INCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTG 473
Query: 405 RSAAEALQEMPDKFSFQMECYYKHLNQE-----YVSVETKFIPSTTLPGEHLLTQNFHWD 459
+A AL + ++ ++ N E V+ T+ T + E+L+ Q F +
Sbjct: 474 STAPGALNQ-----QLYLQFITRYQNSEGKSLARVTTLTRQWVDTAVSTENLV-QGFDQE 527
Query: 460 IMAGSIMKKISFAVLFQGKFYDYDLRWWTLEIVKLLKSLNAID---------VPGIKSLQ 510
A +M +++ + + +D RW +++L P +
Sbjct: 528 -TAAVVMARLTSLKMETEEGFD-ATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPYLTLFP 585
Query: 511 EVTYFMQRSTLLRKRNTSPDEWIVYHWTILNSPLSHIFKMVRPQVYS 557
+ + ++RS ++ N SPDE + + +S+ M++P + S
Sbjct: 586 QFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMIQPSLTS 632
>SPBC776.04 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 765
Score = 82.8 bits (203), Expect = 2e-15
Identities = 99/480 (20%), Positives = 182/480 (37%), Gaps = 75/480 (15%)
Query: 236 FVFGPCTVAPGKVISMDRKNHIRQHRNIEEDKDVKYWKPSREFYNKMSKSL--KFAPCTV 293
F GPCTV G+V+S + K +R H I DK K++K S++FY+ +++ L + +
Sbjct: 289 FCGGPCTVGLGQVVSTELKEPMRSHSEIANDK-AKHFKKSKKFYSSLAERLSNQGHALDL 347
Query: 294 FVASMDQVGIWEMRSCLNN----FIQYESFNDRNFIYDWQAY--IQGKGCYE---ITRIV 344
F +DQVGI EM + +NN + +SF F +Q + G + + +
Sbjct: 348 FAGCLDQVGIMEMENLVNNTGGAIVLSDSFTTSIFKQSFQRLFSVDASGYLKMGFMANLE 407
Query: 345 IKTSNKLLLNGIFGPVSSLKDKDTHVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTS 404
+ TS L + G+ G K T++SDT G + +++ D
Sbjct: 408 VLTSKGLTICGMIGNGVGENKKGTNISDTQIGISKTNSWK---MAAISPKSSYALYFDLG 464
Query: 405 RSAAEALQEMPDKFSFQMECYYKHLNQEYVSVETKFIPSTTLPGEHLLTQNFHWDIMAGS 464
+ + P + Q YY+H + Y T S ++++F + A
Sbjct: 465 KEMGNPNSQRPTQAFIQFLTYYQHSSGTYRLRVTTISRSFITGNAKSISESFDQEAAAAI 524
Query: 465 IMKKISFAVLFQGKFYDYDLRWWTLEIVKLLKSLNAID---------VPGIKSLQEVTYF 515
+ + F + + RW +++L + +P + +
Sbjct: 525 VARMALFKCQTEDEM--SVTRWIDRNLIRLCQHFADYRKEDPSSFRLLPNFTLYPQFIFH 582
Query: 516 MQRSTLLRKRNTSPDEWIVYHWTILNSPLSHIFKMVRPQVYSTT-----------GLIQN 564
++RS L N SPDE Y + + ++ M++P + S + +
Sbjct: 583 LRRSPFLHIFNNSPDETSFYRHMLNVADVNDSLIMIQPTLQSYSFNEPEGVPVLLDSVSI 642
Query: 565 TTDIL----NYAEPLLVDGGNVLVVRDTSVGDS-------------RVDSLKAAADTIYH 607
D++ Y L+ G + R+ + R++ + AD
Sbjct: 643 KPDVILLLDTYFHILIFHGSTIAQWRNAGYQEQPEYVNLKELLLAPRLEVTELLAD---- 698
Query: 608 DGSRFPKPWYRETKPGASQDRFVIARLGLTAEHSLHS--------------DDLTLDKYM 653
RFP P + G SQ RF+++R+ + + S DD+ L K+M
Sbjct: 699 ---RFPIPRFIVCDQGGSQARFLLSRINPSVSFNKSSQFSPMSKDSETVLTDDVNLQKFM 755
>Hs5454042 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 765
Score = 82.0 bits (201), Expect = 3e-15
Identities = 157/720 (21%), Positives = 271/720 (36%), Gaps = 157/720 (21%)
Query: 59 CGGFANFLCSRDSRAG-WFCSFCNAYNELGNIPLSSSYLKHLGTAA--VPTHSK------ 109
C N LC D RA W C+FC N+ P S + + L A +P S
Sbjct: 66 CRAVLNPLCQVDYRAKLWACNFCYQRNQF---PPSYAGISELNQPAELLPQFSSIEYVVL 122
Query: 110 --------FAIIIDLNCEFEENLDALKMLQFGSVQSLALITIEDGSVTIHTDGSHITVDA 161
F ++D C +E+L ALK S+Q + V + T G + V
Sbjct: 123 RGPQMPLIFLYVVD-TCMEDEDLQALKE----SMQMSLSLLPPTALVGLITFGRMVQVHE 177
Query: 162 ESSSCISH------LKKLDTEWFIAKYGLLVRKIWTDQISFGAK---------------- 199
IS K L + GL K+ Q + G +
Sbjct: 178 LGCEGISKSYVFRGTKDLSAKQLQEMLGL--SKVPVTQATRGPQVQQPPPSNRFLQPVQK 235
Query: 200 ----LAELLCQRTRSK------KRCRRNTALAIFLA----QCLNPSQS---IAFVFGPCT 242
L +LL + R KR R++ +A+ +A +C P+ + F+ GP T
Sbjct: 236 IDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPAT 295
Query: 243 VAPGKVISMDRKNHIRQHRNIEEDKDVKYWKPSREFYNKMSKSLKFAP--CTVFVASMDQ 300
PG V+ + K IR +I++D + KY K + + ++ ++ ++DQ
Sbjct: 296 QGPGMVVGDELKTPIRSWHDIDKD-NAKYVKKGTKHFEALANRAATTGHVIDIYACALDQ 354
Query: 301 VGIWEMRSCLN----NFIQYESFNDRNFIYDWQAYIQGK--GCYEIT---RIVIKTSNKL 351
G+ EM+ C N + +SFN F +Q G +++ + IKTS ++
Sbjct: 355 TGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDMHGQFKMGFGGTLEIKTSREI 414
Query: 352 LLNGIFGPVSSLKDKDTHVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTSRSAAEAL 411
++G GP SL K VS+ G GG+ ++ G V+ +
Sbjct: 415 KISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPI--- 471
Query: 412 QEMPDKFSFQMECYYKHLNQEYVSVETKFIPSTTLPGEHLLTQNFHWDIMAGSIMKKISF 471
+ + Q Y+H S + I TT+ Q +I A S ++ +
Sbjct: 472 -PQGGRGAIQFVTQYQH------SSGQRRIRVTTIARNWADAQTQIQNI-AASFDQEAAA 523
Query: 472 AVLFQGKFYDYD-------LRWWTLEIVKLLKSLNAIDVPGIKSLQ---------EVTYF 515
++ + Y + LRW ++++L + S + + +
Sbjct: 524 ILMARLAIYRAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFH 583
Query: 516 MQRSTLLRKRNTSPDEWIVYHWTILNSPLSHIFKMVRPQVYSTTGLIQNTTDILNYAEPL 575
++RS+ L+ N SPDE Y + L+ M++P +Y+ + EP+
Sbjct: 584 LRRSSFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYS--------FSGPPEPV 635
Query: 576 LVDGGNVLVVR----DTSV------GDSRVDSLKAA--------------------ADTI 605
L+D ++L R DT G++ K+ A I
Sbjct: 636 LLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEI 695
Query: 606 YHDGSRFPKPWYRETKPGASQDRFVIARLGLTAEHS------------LHSDDLTLDKYM 653
H SRFP P Y +T+ G SQ RF+++++ + H+ + +DD++L +M
Sbjct: 696 LH--SRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAWGQESGAPILTDDVSLQVFM 753
>At3g23660 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 765
Score = 80.9 bits (198), Expect = 6e-15
Identities = 95/405 (23%), Positives = 172/405 (42%), Gaps = 48/405 (11%)
Query: 213 RCRRNTALAI-----FLAQCL--NPSQSIAFVFGPCTVAPGKVISMDRKNHIRQHRNIEE 265
R +R T +A+ L CL ++ +A + GPCT PG ++S D + +R H+++++
Sbjct: 262 RSQRCTGVALSVAAGLLGACLPGTGARIVALIGGPCTEGPGTIVSKDLSDPVRSHKDLDK 321
Query: 266 DKDVKYWKPSREFYNKMSKSL--KFAPCTVFVASMDQVGIWEMRSCLNN----FIQYESF 319
D Y+K + +FY+ ++K L + +F +++DQVG+ EM+ + + ESF
Sbjct: 322 DA-APYYKKAVKFYDSIAKQLVTQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESF 380
Query: 320 NDRNFIYDWQAYIQGKG-----CYEITRIVIKTSNKLLLNGIFGPVSSLKDKDTHVSDTP 374
F ++ + C+ T + I S + + G GP SSL+ K V+DT
Sbjct: 381 GHSVFKDSFKRVFEDGDQALGLCFNGT-LEICCSQDIKIQGAIGPCSSLEKKGASVADTV 439
Query: 375 KGFGGSGTFRYKGXXXXXXXXXXXXXVDTSRSAAEALQEMPDKFSFQ-MECYYKHLNQEY 433
G G + +R G D S S + +F Q + Y Q
Sbjct: 440 IGEGNTSAWRLCG---LDKTTCLTIFFDISSSGSNTPGAANPQFYLQFLTSYQNPEGQTL 496
Query: 434 VSVET---KFIPSTTLPGEHLLTQNFHWDIMAGSIMKKISFAVLFQGKFYDYDLRWWTLE 490
+ V T ++I S E L Q F + A +M +++ + + +D RW
Sbjct: 497 LRVTTVCRQWIDSAVSSEE--LVQGFDQE-TAAVVMARLASLKMESEEGFD-ATRWLDRN 552
Query: 491 IVKLLKSLNAI--DVPGIKSLQ-------EVTYFMQRSTLLRKRNTSPDEWIVYHWTILN 541
+++L D P +L + + ++RS ++ N SPDE + +
Sbjct: 553 LIRLCSKFGDYRKDDPASFTLNPYFSLFPQFIFNLRRSQFVQVFNNSPDETAYFCMLLNR 612
Query: 542 SPLSHIFKMVRPQVYSTTGLIQNTTDILNYAEPLLVDGGNVLVVR 586
+S+ M++P + T + AEP L+D ++ R
Sbjct: 613 ENISNATVMIQPSL--------TTYSFNSPAEPALLDVASIAADR 649
>CE27230 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 821
Score = 79.7 bits (195), Expect = 1e-14
Identities = 102/499 (20%), Positives = 200/499 (39%), Gaps = 61/499 (12%)
Query: 219 ALAIFLAQCLNPSQS---IAFVFGPCTVAPGKVISMDRKNHIRQHRNIEEDKDVKYWKPS 275
A+A+ L + PS ++F+ G CT PG V+ + KN IR +I+ED Y K +
Sbjct: 326 AVAVTLLESCFPSTGARIMSFIGGACTHGPGAVVGEELKNPIRSWNSIKEDA-APYMKKA 384
Query: 276 REFYNKMSKSL--KFAPCTVFVASMDQVGIWEMRSCLN----NFIQYESFNDRNFIYDWQ 329
+FY+ ++ + V+ ++DQ G+ EM++ N + + +SFN F +Q
Sbjct: 385 IKFYDGLAARIVKNGHAVDVYSCALDQTGLLEMKNMFNSSGGHVVMGDSFNSSLFKQTYQ 444
Query: 330 AYIQGKGCYEI-----TRIVIKTSNKLLLNGIFGPVSSLKDKDTHVSDTPKGFGGSGTFR 384
+ + +K L + G+ G +S ++ +VSD G GG+ ++
Sbjct: 445 RSFDKDSAGNLKMGFNATMEVKVGAGLKIEGVLGCCASGNVRNANVSDQEMGIGGTCQWK 504
Query: 385 YKGXXXXXXXXXXXXXVDTSRSAAEALQEMPDKFSFQMECYYKHLN-QEYVSVETKFIPS 443
+ G + +A + Q Y+H + ++ + V T
Sbjct: 505 F-GAISPRTTIGVVFEIAAQHGSA---IPQGGRGMVQFVTQYQHADGRKRIRVTTTCRTW 560
Query: 444 TTLPGEH-LLTQNFHWDIMAGSIMKKISFAVLFQGKFYDYDLRWWTLEIVKLLKSLNAID 502
+ + + F + A +I + SF + + LRW +++L +
Sbjct: 561 ADMATQQPNIAYGFDQEAAAVAIARLASFRASNENDTPE-ALRWLDRSLIRLCQKFGEYS 619
Query: 503 VPGIKSLQ---------EVTYFMQRSTLLRKRNTSPDEWIVYHWTILNSPLSHIFKMVRP 553
S + + + ++RS L+ N SPDE Y + + + M++P
Sbjct: 620 KDDPNSFRLSDKFSLFPQFMFHLRRSQFLQVFNNSPDETAYYRHILFSENVLESTTMIQP 679
Query: 554 QVYSTT------GLIQNTTDILNYAEPLLVDGGNVLVVRDTSVGDSRVDSL--------- 598
++S + ++ +T+ IL L+ D +VL+ ++ R +
Sbjct: 680 VLFSYSFNGPPEPVLLDTSSILADRILLMDDYFHVLIYHGQTIAQWRKQNFHENPQYATF 739
Query: 599 -----KAAADTIYHDGSRFPKPWYRETKPGASQDRFVIARLGLTAEH----------SLH 643
AD RFP P Y T+ SQ RF+++++ + H ++
Sbjct: 740 KQLLEAPVADATSILQERFPMPRYIVTEHEGSQARFLLSKVNPSLTHNNPYANEAGSAVF 799
Query: 644 SDDLTLDKYMALFKSKSTA 662
+DD++L +M K S++
Sbjct: 800 TDDVSLQVFMEHLKKLSSS 818
>Hs14591924 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 767
Score = 78.6 bits (192), Expect = 3e-14
Identities = 153/714 (21%), Positives = 266/714 (36%), Gaps = 143/714 (20%)
Query: 59 CGGFANFLCSRDSRAG-WFCSFC-------------NAYNELGNIPLSSSYLKHLGTAAV 104
C N LC D RA W C+FC + N+ + S ++++
Sbjct: 66 CKAVLNPLCQVDYRAKLWACNFCFQRNQFPPAYGGISEVNQPAELMPQFSTIEYVIQRGA 125
Query: 105 PTHSKFAIIIDLNCEFEENLDALKMLQFGSVQSLALITIEDGSVTIHTDGSHITVDAESS 164
+ F ++D C E++L ALK S+Q + D V + T G + V S
Sbjct: 126 QSPLIFLYVVD-TCLEEDDLQALKE----SLQMSLSLLPPDALVGLITFGRMVQVHELSC 180
Query: 165 SCISH------LKKLDTEWFIAKYGLL--------VRKIWTDQISFGAK----------- 199
IS K L + GL R + F +
Sbjct: 181 EGISKSYVFRGTKDLTAKQIQDMLGLTKPAMPMQQARPAQPQEHPFASSRFLQPVHKIDM 240
Query: 200 -LAELLCQRTRSK------KRCRRNTALAIFLAQCL-------NPSQSIAFVFGPCTVAP 245
L +LL + R KR R+T +A+ +A L ++ + F GP T P
Sbjct: 241 NLTDLLGELQRDPWPVTQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFTGGPPTQGP 300
Query: 246 GKVISMDRKNHIRQHRNIEEDKDVKYWKPSREFYNKMS-KSLKFAPCT-VFVASMDQVGI 303
G V+ + K IR +IE+D + ++ K + + Y ++ ++ C ++ ++DQ G+
Sbjct: 301 GMVVGDELKIPIRSWHDIEKD-NARFMKKATKHYEMLANRTAANGHCIDIYACALDQTGL 359
Query: 304 WEMRSCLN----NFIQYESFNDRNFIYDWQAYIQG--KGCYEIT---RIVIKTSNKLLLN 354
EM+ C N + +SFN F +Q G + + + +KTS +L +
Sbjct: 360 LEMKCCANLTGGYMVMGDSFNTSLFKQTFQRIFTKDFNGDFRMAFGATLDVKTSRELKIA 419
Query: 355 GIFGPVSSLKDKDTHVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTSRSAAEALQEM 414
G GP SL K VS+ G GG+ ++ G V+ +
Sbjct: 420 GAIGPCVSLNVKGPCVSENELGVGGTSQWKICGLDPTSTLGIYFEVVNQHNTPI----PQ 475
Query: 415 PDKFSFQMECYYKHLNQEYVSVETKFIPSTTLPGEHLLTQNFHWDIMAGSIMKKISFAVL 474
+ + Q +Y+H S + I TT+ Q+ I A + + +
Sbjct: 476 GGRGAIQFVTHYQH------SSTQRRIRVTTIARNWADVQSQLRHIEAAFDQEAAAVLMA 529
Query: 475 FQGKFYDYD------LRWWTLEIVKLLKSLNAIDVPGIKSLQ---------EVTYFMQRS 519
G F LRW ++++L + + S + + + ++RS
Sbjct: 530 RLGVFRAESEEGPDVLRWLDRQLIRLCQKFGQYNKEDPTSFRLSDSFSLYPQFMFHLRRS 589
Query: 520 TLLRKRNTSPDEWIVYHWTILNSPLSHIFKMVRPQVYSTTGLIQNTTDILNYAEPLLVDG 579
L+ N SPDE Y L+ M++P +YS + EP+L+D
Sbjct: 590 PFLQVFNNSPDESSYYRHHFARQDLTQSLIMIQPILYSYS--------FHGPPEPVLLDS 641
Query: 580 GNVLVVR----DT------SVGDSRVDSLKAAADTI--YHD----------------GSR 611
++L R DT +G++ KA + Y + +R
Sbjct: 642 SSILADRILLMDTFFQIVIYLGETIAQWRKAGYQDMPEYENFKHLLQAPLDDAQEILQAR 701
Query: 612 FPKPWYRETKPGASQDRFVIARLGLTAEHS------------LHSDDLTLDKYM 653
FP P Y T+ G SQ RF+++++ + H+ + +DD++L +M
Sbjct: 702 FPMPRYINTEHGGSQARFLLSKVNPSQTHNNLYAWGQETGAPILTDDVSLQVFM 755
>At1g05520 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 811
Score = 74.3 bits (181), Expect = 5e-13
Identities = 92/412 (22%), Positives = 171/412 (41%), Gaps = 51/412 (12%)
Query: 184 LLVRKIWTDQISFGAKLAELLCQRTRSKKRCRRNTALAIFLAQCL-------NPSQSIAF 236
LL+ ++ TDQ Q R + RC T +AI +A L ++ +A
Sbjct: 262 LLLEELQTDQWPV---------QAGRRQSRC---TGVAISVATGLLGACFPGTGARIVAL 309
Query: 237 VFGPCTVAPGKVISMDRKNHIRQHRNIEEDKDVKYWKPSREFYNKMSKSL--KFAPCTVF 294
+ GPC+ PG ++S D +R H+++++D ++K + +FY+ ++ L + +F
Sbjct: 310 IGGPCSEGPGTIVSKDLSEPLRSHKDLDKDA-APFYKKAEKFYDALANQLVNQGHVLDLF 368
Query: 295 VASMDQVGIWEMRSCLNN----FIQYESFNDRNFIYDWQAYIQGKG-----CYEITRIVI 345
+++DQVG+ EM++ + + ESF F ++ + C+ T + I
Sbjct: 369 ASALDQVGVAEMKAAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEESLGLCFNGT-LEI 427
Query: 346 KTSNKLLLNGIFGPVSSLKDKDTHVSDTPKGFGGSGTFRYKGXXXXXXXXXXXXXVDTSR 405
S + + GI GP +SL+ K V+DT G G + ++ G + +
Sbjct: 428 CCSKDIKIQGIIGPCASLQKKGPSVADTVIGEGNTTQWKMCGLDKRTCLTVFFDLSSSDQ 487
Query: 406 SAAEALQEMPDKFSFQMECYY---KHLNQEYVSVETKFIPSTTLPGEHLLTQNFHWDIMA 462
S+A + ++ Q Y K + V+ T+ T L E L+ Q F + A
Sbjct: 488 SSAPG--GVNNQLYLQFMTSYQNSKGKTLQRVTTVTRQWVDTGLSTEELV-QGFDQETAA 544
Query: 463 GSIMKKISFAVLFQGKFYDYDLRWWTLEIVKLLKSLNAIDV---------PGIKSLQEVT 513
+ + S + + F RW +++L P + T
Sbjct: 545 VVVARLASLKMETEEGF--DATRWLDRNLIRLCSKFGDYRKDDPASFTLNPNFSLFPQFT 602
Query: 514 YFMQRSTLLRKRNTSPDEWIVYHWTILNSPLSHIFKMVRPQV--YSTTGLIQ 563
+ ++RS ++ N SPDE + +S+ M++P + YS L Q
Sbjct: 603 FNLRRSQFVQVFNNSPDETAYNRMLLNRENISNAAVMIQPSLTTYSFNSLPQ 654
>At5g43670 [U] KOG1986 Vesicle coat complex COPII subunit SEC23
Length = 736
Score = 63.5 bits (153), Expect = 1e-09
Identities = 52/164 (31%), Positives = 73/164 (43%), Gaps = 18/164 (10%)
Query: 231 SQSIAFVFGPCTVAPGKVISMDRKNHIRQHRNIEEDKDVKYWKPSREFYNKMSKSL--KF 288
S+ + F GP T PG ++ D N IR HR+I V Y+ S FY K++K L
Sbjct: 262 SRIMVFTSGPATRGPGIIVDSDLSNSIRTHRDIITG-HVSYYDKSCGFYKKLAKRLCDSS 320
Query: 289 APCTVFVASMDQVGIWEMRSC---------LNNFIQYESFND---RNFIYDWQAYIQGKG 336
VF S+DQVG E+R L + E F FI D +
Sbjct: 321 VVLDVFACSLDQVGAAELRYAVEMSGGFLLLGETFESEQFKKCLRHIFIRDADGNL---S 377
Query: 337 CYEITRIVIKTSNKLLLNGIFGPVSSLKDKDTHVSDTPKGFGGS 380
Y + + T+ + + G GPV SL+ K+ VS+T G GG+
Sbjct: 378 MYFDVSLEVVTTKDMRICGALGPVVSLRQKNDIVSETEIGEGGT 421
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,540,118
Number of Sequences: 60738
Number of extensions: 1659455
Number of successful extensions: 3644
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3592
Number of HSP's gapped (non-prelim): 31
length of query: 662
length of database: 30,389,216
effective HSP length: 113
effective length of query: 549
effective length of database: 23,525,822
effective search space: 12915676278
effective search space used: 12915676278
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)