ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2573 good S KOG4503 Function unknown Uncharacterized conserved membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII2573 901896  903239 448  
         (448 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YHR036w [S] KOG4503 Uncharacterized conserved membrane protein        270   2e-72
YGL247w [S] KOG4503 Uncharacterized conserved membrane protein         67   5e-11
SPAC8F11.06 [S] KOG4503 Uncharacterized conserved membrane protein     64   6e-10

>YHR036w [S] KOG4503 Uncharacterized conserved membrane protein
          Length = 471

 Score =  270 bits (691), Expect = 2e-72
 Identities = 182/467 (38%), Positives = 255/467 (53%), Gaps = 61/467 (13%)

Query: 1   MEEFNALSLTSSCQDDTLE-ESDLLAMSNLSISERKP-MPEELINKFLPYTPPCPSPLRA 58
           ME F  LS+  S        + +L  +S+LSIS++ P +  +LIN+F+P+ P  PSPLR 
Sbjct: 1   MESFENLSIRDSFTSGMEHVDEELGGLSDLSISKQGPTLSPQLINRFMPHFPSSPSPLRN 60

Query: 59  TV--SIPKSDH--DDLMEIDEIYDIAGNED------------------KKIQGTQNGKMK 96
           T+  S  K+D   DD MEIDE+ D +  E+                  ++I+ T   + K
Sbjct: 61  TLDFSAAKADEEEDDRMEIDEVDDTSFEEEYNNEPIETHTEATENAVVEEIEATPEERQK 120

Query: 97  DGVGE--DLLVEDTEDTYLDSKGEQTGLIKTLLSPTSLGIALATRDLENKPEP-----SN 149
               E  D  VE+ E+        ++ +IK LLSPT LG+A AT+     P P      +
Sbjct: 121 QEKNESQDQSVEEVENIV---SPHRSTVIKALLSPTDLGVAAATKVEGVVPLPPSANQDD 177

Query: 150 DESANAATE----IPVEPINSKLDXXXXXXXXXXXIHDLPS-VSEEKLHSRYPDSQKPWQ 204
           +ES+N   E    I  E +  ++             +   S + + +L SR     +P Q
Sbjct: 178 NESSNNNAEGEDIIRNEEVEDEIKSSLGNHKSSQYANAFDSEIIKRELRSR--SKYQPIQ 235

Query: 205 IQVQNHHYYYMVPD--RTPQSNEFYHETSMPQTSEHLDRKE---LPLPWSSESNPASKAS 259
           +    H+Y+Y   D  +T    +  H     +  E  D+ E   LP PWS  S+PAS+AS
Sbjct: 236 VSFNTHNYFYSDKDGIKTYSLTKPNHN----KIDEFYDQNEAFKLPKPWSPNSHPASRAS 291

Query: 260 YAFTTYLQMALNIITVMIICSTITAFAKAVRTDIKSTWEHRKLELDFESANCKVEYLANH 319
           YA  +YLQ+ LN IT ++I S I +F  A++ D+KSTWE RK EL +ES  C+ +YL N 
Sbjct: 292 YALMSYLQLFLNAITTVVIFSFILSFIIALQKDLKSTWEQRKHELQYESRICQEQYLTNR 351

Query: 320 CNQDEVVPALLEQCNQWGKCMNRNNDIYFRARTSLGARLFGEIINSLIEPLGWKALIVIL 379
           CNQ   +PAL EQC  W +CM+RNNDI+FRAR++L A+LFG+IINS I+PL WK L VI 
Sbjct: 352 CNQTPGLPALGEQCAIWKQCMDRNNDIFFRARSTLSAKLFGDIINSFIDPLNWKTLFVIF 411

Query: 380 LTLAIWCFSSNFLLGFMRAKSYYGT-----------PTPHTQLTHSS 415
             +  WCFSSNFLLGF+RAKSYYG             +P ++ THSS
Sbjct: 412 CGVITWCFSSNFLLGFVRAKSYYGNGIKTYPLPSSPKSPTSEETHSS 458


>YGL247w [S] KOG4503 Uncharacterized conserved membrane protein
          Length = 197

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 43/136 (31%), Positives = 62/136 (44%), Gaps = 5/136 (3%)

Query: 265 YLQMALNIITVMIICSTITAFAKAVRTDIKSTWEHRKLELDFESANCKVEYLANHCNQDE 324
           Y+Q+  N I   I  S    F   +R D+    EH   E   + A CK  Y  N C    
Sbjct: 50  YIQLFFNFIIGTIGLSLAIKFILMIRNDVNLKLEHNVREELDKIATCKSRYFENQCEPHM 109

Query: 325 VVPALLEQCNQWGKCMNR---NNDIYFRARTSLGARLFGEIINSLIEPLGWKALIVILLT 381
            VPAL  +CN+W KCMN+   +   Y  A+    AR   E+IN+  E    ++ + IL++
Sbjct: 110 RVPALEVRCNEWSKCMNKEIVSGSDYQWAKA--WARTLAEVINAFFEAFSIRSFLFILIS 167

Query: 382 LAIWCFSSNFLLGFMR 397
           +    F +N   G  R
Sbjct: 168 IIGIIFVTNTSFGSYR 183


>SPAC8F11.06 [S] KOG4503 Uncharacterized conserved membrane protein
          Length = 297

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 6/136 (4%)

Query: 265 YLQMALNIITVMIICSTITAFAKAVRTDIKSTWEHRKLELDFESANCKVEYLANHCNQDE 324
           YLQ+  N     I    +      ++ D+++  E+ K+  + ++A+C+ EYL+ +C  D 
Sbjct: 122 YLQLMFNACVASIFLYFLFKIVFGIQNDVRNRVEYHKILQEEQAADCQREYLSINC--DS 179

Query: 325 VVPALLEQCNQWGKC-MNRNNDIYFRARTSLGARLFGEIINSLIEPLGWKALIVILLTLA 383
             PA+ E C +  +C M  +N++     T L A +F EII++ I  + +K ++  L+ + 
Sbjct: 180 PGPAIFEVCQKLKQCKMESSNNV---GSTKLAALVFAEIIDAFISHISYKTMVFSLILVF 236

Query: 384 IWCFSSNFLLGFMRAK 399
               +SN+  G  RA+
Sbjct: 237 GSLLTSNYAFGLYRAR 252


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.313    0.131    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,723,150
Number of Sequences: 60738
Number of extensions: 1309042
Number of successful extensions: 3213
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3207
Number of HSP's gapped (non-prelim): 3
length of query: 448
length of database: 30,389,216
effective HSP length: 110
effective length of query: 338
effective length of database: 23,708,036
effective search space: 8013316168
effective search space used: 8013316168
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)