ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2606 good R KOG2858 General function prediction only Uncharacterized conserved protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2606 915315 916580 422
(422 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR040w [R] KOG2858 Uncharacterized conserved protein 224 2e-58
SPCC613.07 [R] KOG2858 Uncharacterized conserved protein 56 1e-07
Hs20149643 [R] KOG2858 Uncharacterized conserved protein 53 7e-07
>YHR040w [R] KOG2858 Uncharacterized conserved protein
Length = 366
Score = 224 bits (571), Expect = 2e-58
Identities = 148/407 (36%), Positives = 203/407 (49%), Gaps = 65/407 (15%)
Query: 36 CMVCLNETWKYKCPRXXXXXXXXXXXXXXXETDNCSGISN-ATEYVSSQNLKEADTSE-E 93
C VC + +KYKCPR DNCSG ++ EY+SS+ LK+AD + E
Sbjct: 5 CGVCGIKEFKYKCPRCLVQTCSLECSKKHKTRDNCSGQTHDPKEYISSEALKQADDDKHE 64
Query: 94 MNHLVQRDYNFLIGMNRRLAVLKEDGKSKNKRVLQKVPGVTG---PSRYNVSKPPR---- 146
N VQRDYN+L + R + V K D + KNKRVL V G RY++ + R
Sbjct: 65 RNAYVQRDYNYLTQLKRMVHVQKMDARMKNKRVLGPVGGHNSNFKKRRYDIDEDDRDSTE 124
Query: 147 ---VMRRGVKCLLLPKGMQRSISNKSKWDKPLDTFVWSLEWVLF-----DQKDEHWSHLS 198
++RRGV CL+LPKGMQRS N+SKWDK +D FVWS+EW+L +K E + H+S
Sbjct: 125 CQRIIRRGVNCLMLPKGMQRSSQNRSKWDKTMDLFVWSVEWILCPMQEKGEKKELFKHVS 184
Query: 199 HRNKEESELVHCIGKQVYDKCKEFYR--GAEEEEDKENSATTKEDRSSQMIEFGFRFFTK 256
HR KE LV +GK V+ KC EFYR G + E+ + TKE+R+ + + G +F+TK
Sbjct: 185 HRIKETDFLVQGMGKNVFQKCCEFYRLAGTSSCIEGEDGSETKEERTQILQKSGLKFYTK 244
Query: 257 WFPNNVESIMDTKEVVEID-PKKCVGEIFRDMTVIEFPTIFIVPDMETLTKHGFHLHVEG 315
FP N IMD+K++VE+ +KC+GE+ ++ TVIEFPTIF+ L + LH E
Sbjct: 245 TFPYNTTHIMDSKKLVELAIHEKCIGELLKNTTVIEFPTIFVAMTEADLPEGYEVLHQE- 303
Query: 316 SIDTPVPLRRLTDPXXXXXXXXXXXXXXXXXXESHYPVEYSVIDPKPQAXXXXXXXXXXX 375
P PL + + PV+ D
Sbjct: 304 ----PRPLEHTSTLNKFIDNAREEEDAEEDSQPTEEPVQKETQD---------------- 343
Query: 376 XXXXXXXXXXXXXXXXXXXAPEEGSAKRHSDSEDDYEVGVSLDFLTA 422
++ SDS+DDY G+S+DFLTA
Sbjct: 344 ------------------------ASDSDSDSDDDYNPGLSMDFLTA 366
>SPCC613.07 [R] KOG2858 Uncharacterized conserved protein
Length = 345
Score = 55.8 bits (133), Expect = 1e-07
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 39/285 (13%)
Query: 36 CMVCLNETWKYKCPRXXXXXXXXXXXXXXXETDNCSGISNATEYVSSQNLKEADTSEEMN 95
C C KY+CPR CSG + +V L +N
Sbjct: 9 CSTCQKNASKYRCPRCDSRFCCLECNLEHKRLTKCSGERDPATFVPKSKL--------VN 60
Query: 96 HLVQRDYNFLIGMNRRLAVLKEDGKSKNKRVLQKVPGVTGPSRYNVSKPPRVMRR-GVKC 154
HL D+NFL G+ R L KE+G + V+ + N + R + R G+
Sbjct: 61 HL-NSDFNFLSGVER-LINRKENGSHQ----------VSNRAERNRLQLKRSLERAGINI 108
Query: 155 LLLPKGMQRSISNKSKWDKPLDTFVWSLEWVLFDQKDEHWSHLSHRNKEESELVHCIGKQ 214
P ++ N++ +DK WS+EW L + L+ E + + H +
Sbjct: 109 KFAPPSNKKRRLNRTHYDKKSHLIKWSIEWCLHESSTS--KDLTDEASENTIITHSHPES 166
Query: 215 VYDKCKEFYRGAEEEEDKENSATTKEDRSSQMIEFGFRFFTKWFPNNVESIMDTKEVVEI 274
+ ++ +R EE + NS +K + + +F K + + + K I
Sbjct: 167 --EPLEKIFRKLVEENSEMNSQVSKANIHA---PDDMQFMIKSRKSRSKGFIYKK----I 217
Query: 275 DPKKCVGEIFRDMTVIEFPTIFIVPDMETLTKHGFHLHVEGSIDT 319
+P + R+ V E PTI + +H E S +T
Sbjct: 218 EPSNSLSSCLRNSFVFEVPTIHVFTSTT-------QVHTESSYET 255
>Hs20149643 [R] KOG2858 Uncharacterized conserved protein
Length = 470
Score = 53.1 bits (126), Expect = 7e-07
Identities = 68/284 (23%), Positives = 104/284 (35%), Gaps = 45/284 (15%)
Query: 18 PSTSHLDLSKKKTDMDDKCMVCLNETWKYKCPRXXXXXXXXXXXXXXXETDNCSGISNAT 77
P +H K+K M +C C E KY+CPR C+G+ + T
Sbjct: 203 PPINHPVGCKRKLAMS-RCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKT 261
Query: 78 EYVSSQNLKEADTSEEMNHLVQRDYNFLIGMNRRLAVLKEDGKSKNKRVLQKVPGVTGPS 137
Y+S Q E MN L DY FL + R + D K +
Sbjct: 262 AYISIQQFTE------MNLL--SDYRFLEDVARTADHISRDAFLKRPI----------SN 303
Query: 138 RYNVSKPPRVMRRGVKCLLLPKGMQRSISNKSKWDKPLDTFVWSLEWVLFDQKDEHWSHL 197
+Y R R+G+ LLP G + N + +DK F W ++ + F Q +
Sbjct: 304 KYMYFMKNRARRQGINLKLLPNGFTKRKENSTFFDKKKQQFCWHVK-LQFPQSQAEY--- 359
Query: 198 SHRNKEESELVHCIGKQVYDKCKEFYRGAEEEEDKENSATTKEDRSSQMI--EFGFRFFT 255
I K+V D K + D E S R I + G +
Sbjct: 360 -------------IEKRVPDD-KTINEILKPYIDPEKSDPVIRQRLKAYIRSQTGVQILM 405
Query: 256 KWFPNNVESI-MDTKEVVEIDPKKCVGEIFRDMTVIEFPTIFIV 298
K +E + + E+DP K + + R+ +IE+PT+ +V
Sbjct: 406 K-----IEYMQQNLVRYYELDPYKSLLDNLRNKVIIEYPTLHVV 444
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,821,145
Number of Sequences: 60738
Number of extensions: 948398
Number of successful extensions: 2720
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2707
Number of HSP's gapped (non-prelim): 5
length of query: 422
length of database: 30,389,216
effective HSP length: 109
effective length of query: 313
effective length of database: 23,768,774
effective search space: 7439626262
effective search space used: 7439626262
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)