ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2679 good F KOG1018 Nucleotide transport and metabolism Cytosine deaminase FCY1 and related enzymes
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2679 945455 944742 -238
(238 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL035c [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 282 3e-76
SPBC16D10.10 [F] KOG1018 Cytosine deaminase FCY1 and related enz... 127 1e-29
Hs18562361 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 126 2e-29
At1g48170 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 111 8e-25
7300237 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 104 1e-22
CE17987 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 102 6e-22
At1g68720_2 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 72 9e-13
ECU09g1960 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 67 2e-11
SPCC965.14c [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 57 2e-08
>YJL035c [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 250
Score = 282 bits (722), Expect = 3e-76
Identities = 139/236 (58%), Positives = 180/236 (75%), Gaps = 9/236 (3%)
Query: 3 QDLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGIK 62
Q + HMRTA+ LA+YALDH+ETPVACIFVH+ +V+AYGMN TN+S++G++HAEFMGI
Sbjct: 2 QHIKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61
Query: 63 QIQEKYGTDP--KILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCI 120
QI+ G+ + ++ LYVTVEPCIMCASALKQL I KVVFGCGNERFGGNG++L +
Sbjct: 62 QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGGNGTVLSV 121
Query: 121 HNDTST-----NKSNKYVSIPGVLRREAIMLLRYFYVRENDRAPKPRTKKDRKLDKETFP 175
++DT T N + Y SIPG+LR+EAIMLLRYFYVR+N+RAPKPR+K DR LDK TFP
Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFYVRQNERAPKPRSKSDRVLDKNTFP 181
Query: 176 PLQWDKYLTLEEFEDEFGQEFRDAFYSHRDV-YDEIDWDLIDTGCDESFLHDLIEQ 230
P++W KYL E F + FG ++R F + D+ + +DWDLID+ D + + +L EQ
Sbjct: 182 PMEWSKYLNEEAFIETFGDDYRTCFANKVDLSSNSVDWDLIDSHQD-NIIQELEEQ 236
>SPBC16D10.10 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 367
Score = 127 bits (319), Expect = 1e-29
Identities = 66/123 (53%), Positives = 84/123 (67%), Gaps = 4/123 (3%)
Query: 50 ISGISHAEFMGIKQIQEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNE 109
I GI HAE + I++I E Y + E LYVTVEPC+MCA+ALKQL IK V FGCGN+
Sbjct: 239 IKGIRHAELIAIEKILEHYPAS--VFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGND 296
Query: 110 RFGGNGSILCIHNDTSTNKSNKYVSIPGVLRREAIMLLRYFYVRENDRAPKPRTKKDRKL 169
RFGG GS+ I+ D S + S Y PG+ EA+ML+R FYV+EN +AP P++KK R L
Sbjct: 297 RFGGCGSVFSINKDQSIDPS--YPVYPGLFYSEAVMLMREFYVQENVKAPVPQSKKQRVL 354
Query: 170 DKE 172
+E
Sbjct: 355 KRE 357
>Hs18562361 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 191
Score = 126 bits (317), Expect = 2e-29
Identities = 68/162 (41%), Positives = 99/162 (60%), Gaps = 6/162 (3%)
Query: 8 MRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGIKQIQE- 66
M A+ +AK AL++ E PV C+ V++ N+V+ G N N++ + HAE + I Q+ +
Sbjct: 26 MEEAMHMAKEALENTEVPVGCLMVYN--NEVVGKGRNEVNQTKNATRHAEMVAIDQVLDW 83
Query: 67 --KYGTDP-KILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCIHND 123
+ G P ++ VLYVTVEPCIMCA+AL+ + I VV+GC NERFGG GS+L I +
Sbjct: 84 CRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA 143
Query: 124 TSTNKSNKYVSIPGVLRREAIMLLRYFYVRENDRAPKPRTKK 165
N + IPG EA+ +L+ FY +EN APK + +K
Sbjct: 144 DLPNTGRPFQCIPGYRAEEAVEMLKTFYKQENPNAPKSKVRK 185
>At1g48170 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 311
Score = 111 bits (278), Expect = 8e-25
Identities = 66/149 (44%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 15 AKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGIKQIQ---EKYGTD 71
AK AL+ E PV C+F+ KVIA G N TNE+ + HAE I Q+ +K G
Sbjct: 150 AKLALEALEVPVGCVFLED--GKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQKDGLS 207
Query: 72 PKILSE----VVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCIH-NDTST 126
P ++E VLYVT EPCIMCASAL LGIK+V +GC N++FGG GSIL +H
Sbjct: 208 PSQVAEKFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGSILSLHLGSEEA 267
Query: 127 NKSNKYVSIPGVLRREAIMLLRYFYVREN 155
+ Y G++ EA+ L + FY + N
Sbjct: 268 QRGKGYKCRGGIMAEEAVSLFKCFYEQGN 296
>7300237 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 160
Score = 104 bits (259), Expect = 1e-22
Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 8 MRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGIKQI--- 64
M A+ A+ A D E PV C+FVH +KV+A G N N + HAEF+ I I
Sbjct: 5 MEEALVEARRARDAGEVPVGCVFVHG--DKVVARGGNEVNVHRNATRHAEFICIDAILAS 62
Query: 65 -QEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCIHND 123
+E+ ++ SE+ + VTVEPCIMC++AL LG+K++++GC N+RFGG + D
Sbjct: 63 CRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGGKTVV-----D 117
Query: 124 TSTNKSNKYVSIPGVLRREAIMLLRYFYVRENDRAPKPRTKKDR 167
+ ++ GV EA+ LL+ FY +N AP P+ KK +
Sbjct: 118 VAAVVGHRIEITGGVRADEAMALLKDFYKGDNPAAP-PQAKKKK 160
>CE17987 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 176
Score = 102 bits (253), Expect = 6e-22
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 7/172 (4%)
Query: 2 SQDLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGI 61
++D + A LA+ ALD +E PV C+FV + I G N NE+ HAE + +
Sbjct: 8 AEDTAFLEKAFELAQEALDEDEVPVGCVFVVNGTE--IGRGRNRVNETGDPTRHAEMVAV 65
Query: 62 KQIQEKYGTDPK-ILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCI 120
++ +++GT + +L + LYV++EPCIMC+SA+ QLGI+K+V+G N RFGG + +
Sbjct: 66 TEMWKEHGTGCEDLLKKSTLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGG---VRSV 122
Query: 121 HNDTSTNKSNKYVSIPGVLRREAIMLLRYFYVRENDRAPKPRTK-KDRKLDK 171
+ + + G+ ++ +L+ FY + N AP + K K KLD+
Sbjct: 123 GSAEKYRMEDNVQIVAGIWSERSVAMLKTFYEKLNPFAPPEKRKTKKPKLDE 174
>At1g68720_2 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 246
Score = 71.6 bits (174), Expect = 9e-13
Identities = 56/184 (30%), Positives = 81/184 (43%), Gaps = 25/184 (13%)
Query: 4 DLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGIKQ 63
D + MR A+ AK A D E PV + VH K+IA G N E +HAE + I++
Sbjct: 49 DEIFMREALVEAKKAADTWEVPVGAVLVHD--GKIIARGYNLVEELRDSTAHAEMICIRE 106
Query: 64 IQEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCIHND 123
+ + L++ LYVT+EPC MCA A+ Q + +V+G N+ G +GS + +
Sbjct: 107 GSKALRSWR--LADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPG 164
Query: 124 TSTNKSNKYVSIP--------------GVLRREAIMLLRYFYVRENDRAPKPRTKKDRKL 169
N S P GVL E ++ F+ R KKD+
Sbjct: 165 GEGNGSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLR-------RKKKDKNS 217
Query: 170 DKET 173
D T
Sbjct: 218 DPPT 221
>ECU09g1960 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 150
Score = 67.0 bits (162), Expect = 2e-11
Identities = 51/157 (32%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 8 MRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGIKQIQEK 67
M A+ A A D E PV C+ V + + V++ N TN + S + HAE + I+
Sbjct: 12 MEMAVKEAMRAFDALEVPVGCVVVRNGI--VVSKSHNMTNANKSPLDHAEVISIRDAD-- 67
Query: 68 YGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCIHNDTSTN 127
S YVT EPCIMC L +L +V +GC NE FG ++T
Sbjct: 68 -------CSNSTFYVTCEPCIMCMGILGRLKGVEVYYGCRNEVFG---------SETVCG 111
Query: 128 KSNKYVSIPGVLRREAIMLLRYFYVRENDRAPKPRTK 164
K +P +L+ FY REN AP R K
Sbjct: 112 IGIKSTYLPD---SRCFEILQRFYTRENVFAPDERRK 145
>SPCC965.14c [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 162
Score = 57.0 bits (136), Expect = 2e-08
Identities = 32/107 (29%), Positives = 56/107 (51%), Gaps = 6/107 (5%)
Query: 3 QDLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMGIK 62
+DL ++R AI +++ A D + P CI V N +++ G + ++ HAE +
Sbjct: 9 KDLAYLREAIKVSQQARDEGQHPFGCIIVDENDNVIMSAGNRVPDGDVT--QHAETRAVG 66
Query: 63 QIQEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNE 109
I + + L + LY + EPC MC+ A+ GI++++FG NE
Sbjct: 67 LITKTR----RDLEKCTLYTSTEPCAMCSGAIFWSGIRRMIFGLSNE 109
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,572,916
Number of Sequences: 60738
Number of extensions: 704318
Number of successful extensions: 1616
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1591
Number of HSP's gapped (non-prelim): 9
length of query: 238
length of database: 30,389,216
effective HSP length: 103
effective length of query: 135
effective length of database: 24,133,202
effective search space: 3257982270
effective search space used: 3257982270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)