ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2740 good J KOG0688 Translation, ribosomal structure and biogenesis Peptide chain release factor 1 (eRF1)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2740 965524 966837 438
(438 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR143c [J] KOG0688 Peptide chain release factor 1 (eRF1) 734 0.0
7296284 [J] KOG0688 Peptide chain release factor 1 (eRF1) 629 e-180
Hs4759034 [J] KOG0688 Peptide chain release factor 1 (eRF1) 625 e-179
CE27442 [J] KOG0688 Peptide chain release factor 1 (eRF1) 598 e-171
CE13279 [J] KOG0688 Peptide chain release factor 1 (eRF1) 597 e-170
At1g12920 [J] KOG0688 Peptide chain release factor 1 (eRF1) 577 e-165
At3g26618 [J] KOG0688 Peptide chain release factor 1 (eRF1) 577 e-164
SPAC1834.01 [J] KOG0688 Peptide chain release factor 1 (eRF1) 563 e-160
At5g47880 [J] KOG0688 Peptide chain release factor 1 (eRF1) 557 e-158
ECU05g0360 [J] KOG0688 Peptide chain release factor 1 (eRF1) 425 e-119
Hs17461137 [J] KOG0688 Peptide chain release factor 1 (eRF1) 120 3e-27
>YBR143c [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 437
Score = 734 bits (1894), Expect = 0.0
Identities = 360/418 (86%), Positives = 394/418 (94%)
Query: 1 METDAEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIK 60
M+ + EKNIEIWKVKKL++SLEKARGNGTSMISLVIPPKGQI + QKMLTDEYGTASNIK
Sbjct: 1 MDNEVEKNIEIWKVKKLVQSLEKARGNGTSMISLVIPPKGQIPLYQKMLTDEYGTASNIK 60
Query: 61 SRVNRLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTS 120
SRVNRLSVLSAITSTQQKLKLY +P NGLVLYCGD+ITE+GKEKKVTFDIEPYKPINTS
Sbjct: 61 SRVNRLSVLSAITSTQQKLKLYNTLPKNGLVLYCGDIITEDGKEKKVTFDIEPYKPINTS 120
Query: 121 LYLCDNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRG 180
LYLCDNKFHTEVLSELL+ADDKFGFIVMDGQG LFG ++GNTRTVLHKFTVDLPKKHGRG
Sbjct: 121 LYLCDNKFHTEVLSELLQADDKFGFIVMDGQGTLFGSVSGNTRTVLHKFTVDLPKKHGRG 180
Query: 181 GQSAVRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFD 240
GQSA+RFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFD
Sbjct: 181 GQSALRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFD 240
Query: 241 QRLQAKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYCY 300
RL K++ IVD+SYGGENGFNQAIELSAEALANVK++QEKKL+ YFD+ISQDTGK+CY
Sbjct: 241 PRLACKVISIVDVSYGGENGFNQAIELSAEALANVKYVQEKKLLEAYFDEISQDTGKFCY 300
Query: 301 GIEDTLKALDLGAVEILIVFENLETIRYVYRDSEDKEVLKFVEPEEQDKSYSLDKTTGAE 360
GI+DTLKALDLGAVE LIVFENLETIRY ++D+ED EV+KF EPE +DKS+++DK TG E
Sbjct: 301 GIDDTLKALDLGAVEKLIVFENLETIRYTFKDAEDNEVIKFAEPEAKDKSFAIDKATGQE 360
Query: 361 MDLVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVNFEQLM 418
MD+VSE+PLIEWLA NYKN+GA LEFITDKSSEGAQFVTGFGGIGA+LRYKVNFEQL+
Sbjct: 361 MDVVSEEPLIEWLAANYKNFGATLEFITDKSSEGAQFVTGFGGIGAMLRYKVNFEQLV 418
>7296284 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 464
Score = 629 bits (1622), Expect = e-180
Identities = 307/419 (73%), Positives = 358/419 (85%), Gaps = 3/419 (0%)
Query: 2 ETDAEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIKS 61
ET A++N+EIWK+KKLIKSLE ARGNGTSMISL+IPPK QIS + KML DE+GTASNIKS
Sbjct: 5 ETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKS 64
Query: 62 RVNRLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTSL 121
RVNRLSVL AITS Q +LKLYTK+PPNGLV+YCG ++TEEGKEKKV D EP+KPINTSL
Sbjct: 65 RVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSL 124
Query: 122 YLCDNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRGG 181
YLCDNKFHTE L+ LL D+KFGFIVMDG GALFG L GNTR VLHKFTVDLPKKHGRGG
Sbjct: 125 YLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGG 184
Query: 182 QSAVRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFDQ 241
QSA+RFARLR EKRHNYVRKVAEVA Q FITNDK N+ GLILAGSADFKT+L++S++FD
Sbjct: 185 QSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDP 244
Query: 242 RLQAKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYCYG 301
RLQ+K++K+VD+SYGGENGFNQAIEL+AE+L NVKFIQEKKLI YFD+ISQDTGKYC+G
Sbjct: 245 RLQSKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFG 304
Query: 302 IEDTLKALDLGAVEILIVFENLETIRYV---YRDSEDKEVLKFVEPEEQDKSYSLDKTTG 358
+EDTL+AL+LG+VE LI +ENL+ RYV + +S VL +E+DKS+ DK +G
Sbjct: 305 VEDTLRALELGSVETLICWENLDIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESG 364
Query: 359 AEMDLVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVNFEQL 417
EM+L+ QPL+EWLA NYK +GA LE ITDKS EG+QFV GFGGIG +LRYKV+F+ L
Sbjct: 365 VEMELIESQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSL 423
>Hs4759034 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 437
Score = 625 bits (1613), Expect = e-179
Identities = 302/413 (73%), Positives = 357/413 (86%), Gaps = 2/413 (0%)
Query: 5 AEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIKSRVN 64
A++N+EIWK+KKLIKSLE ARGNGTSMISL+IPPK QIS + KML DE+GTASNIKSRVN
Sbjct: 8 ADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVN 67
Query: 65 RLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTSLYLC 124
RLSVL AITS QQ+LKLY K+PPNGLV+YCG ++TEEGKEKKV D EP+KPINTSLYLC
Sbjct: 68 RLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLC 127
Query: 125 DNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRGGQSA 184
DNKFHTE L+ LL D KFGFIV+DG GALFG L GNTR VLHKFTVDLPKKHGRGGQSA
Sbjct: 128 DNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSA 187
Query: 185 VRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFDQRLQ 244
+RFARLR EKRHNYVRKVAE AVQ FI+ DKVNV GL+LAGSADFKT+L++S++FDQRLQ
Sbjct: 188 LRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQ 247
Query: 245 AKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYCYGIED 304
+K++K+VDISYGGENGFNQAIELS E L+NVKFIQEKKLI YFD+ISQDTGKYC+G+ED
Sbjct: 248 SKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVED 307
Query: 305 TLKALDLGAVEILIVFENLETIRYVY--RDSEDKEVLKFVEPEEQDKSYSLDKTTGAEMD 362
TLKAL++GAVEILIV+ENL+ +RYV + +E++++L +E+DKS+ DK TG E +
Sbjct: 308 TLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHE 367
Query: 363 LVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVNFE 415
L+ PL+EW A NYK +GA LE +TDKS EG+QFV GFGGIG +LRY+V+F+
Sbjct: 368 LIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ 420
>CE27442 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 559
Score = 598 bits (1542), Expect = e-171
Identities = 290/415 (69%), Positives = 350/415 (83%), Gaps = 1/415 (0%)
Query: 5 AEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIKSRVN 64
A++N+E+WK+K+LIKSLE ARGNGTSMISL+IPPK Q++ IQ+ML +EYGTASNIKSRVN
Sbjct: 16 ADRNVEMWKIKRLIKSLELARGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKSRVN 75
Query: 65 RLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTSLYLC 124
RLSVL AITS Q +LKLY K+PPNGLV+YCG ++T+EGKEKKV D EP+K INTSLYLC
Sbjct: 76 RLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKEKKVNIDFEPFKAINTSLYLC 135
Query: 125 DNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRGGQSA 184
DNKFHTE L LL D+KFGFI+MDG G LFG L GNTR VLHKFTVDLPKKHGRGGQSA
Sbjct: 136 DNKFHTEALQGLLADDNKFGFIIMDGNGCLFGTLQGNTREVLHKFTVDLPKKHGRGGQSA 195
Query: 185 VRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFDQRLQ 244
VRFARLR EKRHNYVRKVAE +V+ FI NDKV V GLILAGSADFKT+L +S++FDQRLQ
Sbjct: 196 VRFARLRNEKRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADFKTELGQSDMFDQRLQ 255
Query: 245 AKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYCYGIED 304
AK++K VDI+YGGENGFNQAIEL+A+ LA+VKFIQEKKLI YFD+ISQDTGKY +G++D
Sbjct: 256 AKMIKTVDIAYGGENGFNQAIELAADTLASVKFIQEKKLIGGYFDEISQDTGKYVFGVKD 315
Query: 305 TLKALDLGAVEILIVFENLETIRYVYRDSEDKEVLKFVEP-EEQDKSYSLDKTTGAEMDL 363
TL AL++GA+E LI +ENL+ +RY ++S +++L + P EE+DKS+ D TG +M++
Sbjct: 316 TLAALEMGAIETLICWENLDIVRYKMKNSLGEDILLNLRPDEEKDKSHFTDSETGQDMEI 375
Query: 364 VSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVNFEQLM 418
+ PL+EW A NYKN+GA LE +TDKS EGAQFV GFGGIG LLRY+V+ L+
Sbjct: 376 IETMPLLEWFANNYKNFGAALEIVTDKSQEGAQFVRGFGGIGGLLRYRVDLAHLV 430
>CE13279 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 443
Score = 597 bits (1538), Expect = e-170
Identities = 289/410 (70%), Positives = 348/410 (84%), Gaps = 1/410 (0%)
Query: 5 AEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIKSRVN 64
A++N+E+WK+K+LIKSLE ARGNGTSMISL+IPPK Q++ IQ+ML +EYGTASNIKSRVN
Sbjct: 16 ADRNVEMWKIKRLIKSLELARGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKSRVN 75
Query: 65 RLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTSLYLC 124
RLSVL AITS Q +LKLY K+PPNGLV+YCG ++T+EGKEKKV D EP+K INTSLYLC
Sbjct: 76 RLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKEKKVNIDFEPFKAINTSLYLC 135
Query: 125 DNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRGGQSA 184
DNKFHTE L LL D+KFGFI+MDG G LFG L GNTR VLHKFTVDLPKKHGRGGQSA
Sbjct: 136 DNKFHTEALQGLLADDNKFGFIIMDGNGCLFGTLQGNTREVLHKFTVDLPKKHGRGGQSA 195
Query: 185 VRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFDQRLQ 244
VRFARLR EKRHNYVRKVAE +V+ FI NDKV V GLILAGSADFKT+L +S++FDQRLQ
Sbjct: 196 VRFARLRNEKRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADFKTELGQSDMFDQRLQ 255
Query: 245 AKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYCYGIED 304
AK++K VDI+YGGENGFNQAIEL+A+ LA+VKFIQEKKLI YFD+ISQDTGKY +G++D
Sbjct: 256 AKMIKTVDIAYGGENGFNQAIELAADTLASVKFIQEKKLIGGYFDEISQDTGKYVFGVKD 315
Query: 305 TLKALDLGAVEILIVFENLETIRYVYRDSEDKEVLKFVEP-EEQDKSYSLDKTTGAEMDL 363
TL AL++GA+E LI +ENL+ +RY ++S +++L + P EE+DKS+ D TG +M++
Sbjct: 316 TLAALEMGAIETLICWENLDIVRYKMKNSLGEDILLNLRPDEEKDKSHFTDSETGQDMEI 375
Query: 364 VSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVN 413
+ PL+EW A NYKN+GA LE +TDKS EGAQFV GFGGIG LLRY+V+
Sbjct: 376 IETMPLLEWFANNYKNFGAALEIVTDKSQEGAQFVRGFGGIGGLLRYRVD 425
>At1g12920 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 434
Score = 577 bits (1488), Expect = e-165
Identities = 286/417 (68%), Positives = 343/417 (81%), Gaps = 4/417 (0%)
Query: 1 METDAEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIK 60
M +A+ NIEIWK+KKLIK LE ARGNGTSMISL++PP+ Q+S + KML DEYGTASNIK
Sbjct: 1 MAEEADTNIEIWKIKKLIKGLESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIK 60
Query: 61 SRVNRLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTS 120
SRVNR SVLSAITS QQ+LKLY K+P NGLVLY G ++ ++GKEKKVTFD EP++PIN S
Sbjct: 61 SRVNRQSVLSAITSAQQRLKLYNKVPTNGLVLYTGTIVNDDGKEKKVTFDFEPFRPINAS 120
Query: 121 LYLCDNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRG 180
LYLCDNKFHTE L+ELLE+DDKFGFIVMDG G LFG L+GNTR VLHKFTVDLPKKHGRG
Sbjct: 121 LYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRG 180
Query: 181 GQSAVRFARLREEKRHNYVRKVAEVAVQNFI--TNDKVNVKGLILAGSADFKTDLAKSEL 238
GQSA+RFARLR EKRHNYVRK AE+A Q +I + NV GLILAGSADFKT+L++SEL
Sbjct: 181 GQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSEL 240
Query: 239 FDQRLQAKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKY 298
FD RLQAKI+ +VD+SYGGENGFNQAIELSAE L+NVKFIQEKKLI +YF++ISQDTGKY
Sbjct: 241 FDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKY 300
Query: 299 CYGIEDTLKALDLGAVEILIVFENLETIRYVYRDSEDKE--VLKFVEPEEQDKSYSLDKT 356
+G+EDTLKAL++GA+E LIV+ENL+ RY ++S E V F + +E D S D
Sbjct: 301 VFGVEDTLKALEMGAIETLIVWENLDINRYELKNSTTGEMVVKHFGKDQESDTSNFHDSE 360
Query: 357 TGAEMDLVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVN 413
T AE+++ + PL+EW A YK +G LEF+T+KS EG+QF GFGGIG +LRY+++
Sbjct: 361 TNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLD 417
>At3g26618 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 435
Score = 577 bits (1487), Expect = e-164
Identities = 284/416 (68%), Positives = 346/416 (82%), Gaps = 4/416 (0%)
Query: 2 ETDAEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIKS 61
+ +++KNIEIWK+KKLIK LE ARGNGTSMISL++PP+ Q++ + KML DEYGTASNIKS
Sbjct: 3 DQESDKNIEIWKIKKLIKGLETARGNGTSMISLIMPPRDQVARVTKMLADEYGTASNIKS 62
Query: 62 RVNRLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTSL 121
RVNR SVLSAITS QQ+LKLY K+PPNGLVLY G ++T++GKEKKVT D EP+KPIN SL
Sbjct: 63 RVNRQSVLSAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASL 122
Query: 122 YLCDNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRGG 181
YLCDNKFHTE L+ELLE+DDKFGFIVMDG G LFG L+GNTR VLHKFTVDLPKKHGRGG
Sbjct: 123 YLCDNKFHTEPLNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGG 182
Query: 182 QSAVRFARLREEKRHNYVRKVAEVAVQNFI--TNDKVNVKGLILAGSADFKTDLAKSELF 239
QSA+RFARLR EKRHNYVRK AE+A Q +I + NV GLILAGSADFKT+L++SELF
Sbjct: 183 QSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSELF 242
Query: 240 DQRLQAKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYC 299
D RLQAKI+ +VD+SYGGENGFNQAIELSAE L+NVKFIQEKKLI +YF++ISQDTGKY
Sbjct: 243 DPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYV 302
Query: 300 YGIEDTLKALDLGAVEILIVFENLETIRYVYRDSEDKEVL--KFVEPEEQDKSYSLDKTT 357
+G+EDTLKAL++GAVE LIV+ENL+ RY +++ E++ + +E ++S D T
Sbjct: 303 FGVEDTLKALEMGAVETLIVWENLDINRYELKNNTTGEIVIKHLGKDQENNQSNFHDAET 362
Query: 358 GAEMDLVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVN 413
AE+++ + PL+EW A YK +G LEF+T+KS EG+QF GFGGIG LLRY+++
Sbjct: 363 NAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGLLRYQLD 418
>SPAC1834.01 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 433
Score = 563 bits (1452), Expect = e-160
Identities = 271/421 (64%), Positives = 346/421 (81%), Gaps = 4/421 (0%)
Query: 1 METDAEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIK 60
M AEK IEIWK+++L+K L GNGTSMI+L+IPP QIS ML +EYGTASNIK
Sbjct: 1 MSETAEKAIEIWKIRRLVKQLINCHGNGTSMITLIIPPGEQISRYSNMLAEEYGTASNIK 60
Query: 61 SRVNRLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTS 120
SRVNRLSVLSAITST+++LKLY K+P NGLV+YCG++I E K +K+ D EP+KPINTS
Sbjct: 61 SRVNRLSVLSAITSTRERLKLYNKVPDNGLVIYCGEVIMEGNKTRKLNIDFEPFKPINTS 120
Query: 121 LYLCDNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRG 180
YLCDNKFHTE L+ELLE+D +FGFIVMDG L+G+++G+ R VL +FTVDLPKKHGRG
Sbjct: 121 QYLCDNKFHTEALAELLESDQRFGFIVMDGHQTLYGVVSGSAREVLQRFTVDLPKKHGRG 180
Query: 181 GQSAVRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFD 240
GQSA+RFARLR+EKRHNYVRKVAE AVQ+FIT+DK NV G++LAGSADFKT+L +S+LFD
Sbjct: 181 GQSALRFARLRDEKRHNYVRKVAEGAVQHFITDDKPNVAGIVLAGSADFKTELGQSDLFD 240
Query: 241 QRLQAKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYCY 300
QRLQ++I+K VD+SYGG+ GFNQAIEL+A+ L+NVK++QEKKLI +FD+IS D+GKYC+
Sbjct: 241 QRLQSRIIKTVDVSYGGDAGFNQAIELAADTLSNVKYVQEKKLIQRFFDEISLDSGKYCF 300
Query: 301 GIEDTLKALDLGAVEILIVFENLETIRYVYRDSEDKEVLKFVEPEEQDK----SYSLDKT 356
G+ DT+ AL GAVE L+ F +L+ IRY +++SE V+ ++ E+++K S+ LDK
Sbjct: 301 GVVDTMNALQEGAVETLLCFADLDMIRYEFKNSEGNPVITYMTKEQEEKDSTNSFLLDKD 360
Query: 357 TGAEMDLVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVNFEQ 416
TGAEM+LVS L EWLAE+YK+YGANLEF++D+S EG QFV GFGGIGA++RY+++
Sbjct: 361 TGAEMELVSSMLLSEWLAEHYKDYGANLEFVSDRSQEGMQFVKGFGGIGAVMRYQLDLSM 420
Query: 417 L 417
L
Sbjct: 421 L 421
>At5g47880 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 436
Score = 557 bits (1436), Expect = e-158
Identities = 276/416 (66%), Positives = 340/416 (81%), Gaps = 4/416 (0%)
Query: 2 ETDAEKNIEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIKS 61
+ D +KNIEIWK+KKLIKSLE ARGNGTSMISL++PP+ Q+S + KML DEYGTASNIKS
Sbjct: 4 KNDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKS 63
Query: 62 RVNRLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTSL 121
RVNR SVL AITS QQ+LKLY ++PPNGLVLY G ++ E+GKEKKVT D EP++PIN SL
Sbjct: 64 RVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEDGKEKKVTIDFEPFRPINASL 123
Query: 122 YLCDNKFHTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRGG 181
YLCDNKFHTE L+ELLE+DDKFGFIVMDG G LFG L+GNTR VLHKF+VDLPKKHGRGG
Sbjct: 124 YLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGG 183
Query: 182 QSAVRFARLREEKRHNYVRKVAEVAVQNFI--TNDKVNVKGLILAGSADFKTDLAKSELF 239
QSA+RFARLR EKRHNYVRK AE+A Q +I + NV GLILAGSADFKT+L++S++F
Sbjct: 184 QSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQSDMF 243
Query: 240 DQRLQAKIVKIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYC 299
D RL AKI+ +VD+SYGGENGFNQAIELSAE LANVKFIQEK+LI +YF++ISQDTGKY
Sbjct: 244 DPRLAAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTGKYV 303
Query: 300 YGIEDTLKALDLGAVEILIVFENLETIRYVYRDSEDKE-VLKFVEPEEQDKSYSLD-KTT 357
+G+EDTL AL+ GA+E LIV+ENL+ RYV ++S E V+K + E++ + + +
Sbjct: 304 FGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKHLNKEQEANTENFKVADS 363
Query: 358 GAEMDLVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVN 413
+D+ + L+EWLA Y+ +G LEF+T+KS EG+QF GFGGIG +LRY+++
Sbjct: 364 DLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLD 419
>ECU05g0360 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 386
Score = 425 bits (1093), Expect = e-119
Identities = 208/407 (51%), Positives = 290/407 (71%), Gaps = 41/407 (10%)
Query: 9 IEIWKVKKLIKSLEKARGNGTSMISLVIPPKGQISMIQKMLTDEYGTASNIKSRVNRLSV 68
+E+W++KKL+++L +RGNGTSMIS++IPPK QIS + KMLTDEYGTASNIKSRVNRLSV
Sbjct: 5 VEMWRMKKLLRNLRDSRGNGTSMISIIIPPKDQISRVSKMLTDEYGTASNIKSRVNRLSV 64
Query: 69 LSAITSTQQKLKLYTKIPPNGLVLYCGDMITEEGKEKKVTFDIEPYKPINTSLYLCDNKF 128
L AITS Q KLK Y+K PPNGL ++ G ++T++ KEKK++ IEP KP+NTSLY+CD+KF
Sbjct: 65 LGAITSAQSKLKQYSKTPPNGLGIFVGTVLTDQNKEKKISVGIEPIKPVNTSLYMCDSKF 124
Query: 129 HTEVLSELLEADDKFGFIVMDGQGALFGLLTGNTRTVLHKFTVDLPKKHGRGGQSAVRFA 188
H + L L E + ++GFIVMDG +F L GN +T+L + VDLPKKHGRGGQS+VRFA
Sbjct: 125 HVDDLLALFEDEARYGFIVMDGHSTVFATLQGNVKTILQQIHVDLPKKHGRGGQSSVRFA 184
Query: 189 RLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADFKTDLAKSELFDQRLQAKIV 248
RLR EKR+ YV+KV E+A F+TN +NV+GLILAG +D K +LA ++ D R+Q ++
Sbjct: 185 RLRVEKRNAYVKKVGEIAGNLFLTNCVMNVEGLILAGQSDLKNELA--QVLDSRIQ--VI 240
Query: 249 KIVDISYGGENGFNQAIELSAEALANVKFIQEKKLITEYFDQISQDTGKYCYGIEDTLKA 308
K VD +YGGE+G NQAIEL + L +VK +EKK++ +F++I+ ++G++C+ + DT++
Sbjct: 241 KAVDTNYGGESGLNQAIELCEDVLKDVKLSKEKKILQRFFNEINTESGRFCFTMRDTMQC 300
Query: 309 LDLGAVEILIVFENLETIRYVYRDSEDKEVLKFVEPEEQDKSYSLDKTTGAEMDLVSEQP 368
L++GAVE LIV+E L +L E+
Sbjct: 301 LEMGAVETLIVYEGLS-------------------------------------ELKDEEL 323
Query: 369 LIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVNFE 415
++W+AENYK++G L F++DKS+EG QF+ GFGG+G +LRY+V+ E
Sbjct: 324 FVDWIAENYKSFGCILAFVSDKSAEGMQFIEGFGGVGGILRYRVDME 370
>Hs17461137 [J] KOG0688 Peptide chain release factor 1 (eRF1)
Length = 337
Score = 120 bits (302), Expect = 3e-27
Identities = 58/110 (52%), Positives = 77/110 (69%)
Query: 40 GQISMIQKMLTDEYGTASNIKSRVNRLSVLSAITSTQQKLKLYTKIPPNGLVLYCGDMIT 99
G ++ ++ + G++++ + + +VL ITS QQ+LKLY K+P N LV+ CG +
Sbjct: 149 GALNHTVLLMHGKNGSSASSWTLLTMGNVLGGITSVQQRLKLYNKVPSNSLVVCCGTTVA 208
Query: 100 EEGKEKKVTFDIEPYKPINTSLYLCDNKFHTEVLSELLEADDKFGFIVMD 149
+EGKEKKV D EP+KPINTSLYLCDNKFHTE L LL D KFGFIV+D
Sbjct: 209 KEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALIALLSDDSKFGFIVID 258
Score = 68.2 bits (165), Expect = 2e-11
Identities = 32/62 (51%), Positives = 43/62 (68%)
Query: 354 DKTTGAEMDLVSEQPLIEWLAENYKNYGANLEFITDKSSEGAQFVTGFGGIGALLRYKVN 413
DK TG E +L+ PL+E A NYK +GA LE +TDKS E +QFV G G G++L Y+V+
Sbjct: 259 DKETGWEHELIERIPLLELFANNYKKFGAMLEIVTDKSQEMSQFVKGLGRSGSILWYRVD 318
Query: 414 FE 415
F+
Sbjct: 319 FQ 320
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.136 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,826,093
Number of Sequences: 60738
Number of extensions: 1001158
Number of successful extensions: 2969
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2944
Number of HSP's gapped (non-prelim): 13
length of query: 438
length of database: 30,389,216
effective HSP length: 109
effective length of query: 329
effective length of database: 23,768,774
effective search space: 7819926646
effective search space used: 7819926646
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)