ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2884 good BD KOG3105 Cell cycle control, cell division, chromosome partitioning DNA-binding centromere protein B (CENP-B)
r_klactIII2884 good BD KOG3105 Chromatin structure and dynamics DNA-binding centromere protein B (CENP-B)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2884 1016309 1014015 -765
(765 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR081c [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 616 e-176
SPAC9E9.10c [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 87 7e-17
At2g06660 [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 82 4e-15
SPBC14F5.12c [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 80 1e-14
Hs13569924 [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 80 1e-14
Hs20537842 [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 80 2e-14
Hs20470774 [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 75 5e-13
SPBC1105.04c [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 67 1e-10
Hs4504807 [BD] KOG3105 DNA-binding centromere protein B (CENP-B) 60 2e-08
>YDR081c [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 925
Score = 616 bits (1588), Expect = e-176
Identities = 324/722 (44%), Positives = 447/722 (61%), Gaps = 53/722 (7%)
Query: 3 LSIEQKYNICLMAEKHPKWTQAELAQWAYQVYQLPSKPSQGTISRLLAKKSEFMNSKEHE 62
LSI+Q+YNICLMAE+HPKWTQ ELA+WAY+ +QLP PSQGTISRLLA+KS +MN KEHE
Sbjct: 2 LSIQQRYNICLMAERHPKWTQLELAKWAYETFQLPKIPSQGTISRLLARKSTYMNCKEHE 61
Query: 63 KDSNRLRRPNNLLVHKILQEWVSQSIWNGIPVSLPIIQDTAQSVWHKIPAEYREGKGSFS 122
KD+NRLR+PNNLLV KILQEW+SQS+WNGIP++ PIIQDTAQ+VWH+IPAE+REG GSFS
Sbjct: 62 KDANRLRKPNNLLVRKILQEWISQSLWNGIPITSPIIQDTAQAVWHRIPAEHREGNGSFS 121
Query: 123 HKWVANFLSRMNLSTHIIEHDMPKHPKVWYFDERTLLKQFIAQIPEDSLFTLDETFLAYN 182
+KW++NFLS+M+++ +++ ++PK PKVW F+ER +LK + ++IP LFTLDE FL+YN
Sbjct: 122 YKWISNFLSKMDVNISVLDEELPKTPKVWTFEERDVLKAYFSKIPPKDLFTLDEAFLSYN 181
Query: 183 LPLDYAQYETNSIQKRLEVITVMLCANLSGTEKMNPLVIGRYENYNTFKNYMGEDSHIGT 242
LPLDYAQYE +SIQ+R+EV TVMLC+NL G+EK+ P+V+G+Y++Y +F+NY + +
Sbjct: 182 LPLDYAQYEASSIQRRIEVATVMLCSNLDGSEKLKPVVVGKYDSYKSFRNYFPNEPNDPV 241
Query: 243 NDVHLGEKTGKRFGIVYQSNRKSWLTSTVFHDWLVAFDKRLVSDNRKIWIILDDSCSHRX 302
+ LG K K+F I Y SNRK+WLTS +FH+WLV +DKRLV+ NRKIWI+LDDSC HR
Sbjct: 242 SQSMLGTKMAKKFDISYHSNRKAWLTSNLFHNWLVRWDKRLVAVNRKIWIVLDDSCCHRI 301
Query: 303 XXXXXXXXXXXYTSANSRFLPFNWGVLEEFKARYRVQQYKALIDLQKNISQSLTDFK--- 359
YTS+NS+FLPFNWGV +EFK RYR+QQY+ALIDLQ IS+++ +
Sbjct: 302 INLRLQNIKLVYTSSNSKFLPFNWGVWDEFKTRYRIQQYQALIDLQNRISKNIQNKNKSE 361
Query: 360 -----------LLTYEQSCLTMTNAFKFIKIAWDAIPKERINSNWKNSGILPSSYLHQDK 408
L+++EQS LTM+NAFKFIK AWD IP + I +NWK+SG+LP +H ++
Sbjct: 362 RNECIPNGKKCLISFEQSQLTMSNAFKFIKKAWDDIPVDAIKANWKSSGLLPPEMIHLNE 421
Query: 409 MKHNTFKKNKVLEANLNDLCNTYMCMKKWDYSMLLNLNIENKNKSFXXXXXXXXXXXVDQ 468
FKKN+VLE+ LN LC+ Y C+KKW+Y MLL+LNIENKN +F V+
Sbjct: 422 NVSMAFKKNEVLESVLNRLCDEYYCVKKWEYEMLLDLNIENKNTNFLSTEELVESAIVEP 481
Query: 469 WEPETXXXXXXXXXXXXXXXXXXTPSIKPVIPLENSVVQNGSKLISEQLPANPSFPTIVP 528
EP+ V N N + L Q NP + +
Sbjct: 482 CEPDFDTAPKGNEVHDDNF---------DVSVFANEDDNNQNHLSMSQASHNPDYNS--- 529
Query: 529 GNNENSGVK-ISTVSELIDNNTEDIFGNMLDNNFFPDDMLTGINNAISEKANPG-----A 582
N+ N+ ++ + +NN N+ DN+ + + ++ NPG +
Sbjct: 530 -NHSNNAIENTNNRGSNNNNNNNGSSNNINDNDSSVKYLQQNTVDNSTKTGNPGQPNISS 588
Query: 583 VETNVSLPSADVSEESNN--------NTPYS--------EHENQTAFNAPPIVTSQNSSY 626
+E+ + + D+ + N N PY+ ++ T + P + S +
Sbjct: 589 MESQRNSSTTDLVVDGNYDVNFNGLLNDPYNTMKQPGPLDYNVSTLIDKPNLFLSPDLDL 648
Query: 627 NT----REQPSSTVLSNYVNEILSNPTPAGLDNEKLVIMTTLQTNLELAKAMGTILKHSE 682
+T + PSS S + + N A D K T + + ++ T L S
Sbjct: 649 STVGVDMQLPSSEYFSEVFSSAIRNNEKAASDQNKSTDELPSSTAMANSNSITTALLESR 708
Query: 683 VQ 684
Q
Sbjct: 709 NQ 710
Score = 77.4 bits (189), Expect = 8e-14
Identities = 69/250 (27%), Positives = 115/250 (45%), Gaps = 26/250 (10%)
Query: 493 PSIKPVIPLENSVVQNGSKLISEQLPANPSFPTIVPGNNENSGVKISTVSELIDNNTEDI 552
PS + + +S ++N K S+Q + P+ N NS T + L N
Sbjct: 658 PSSEYFSEVFSSAIRNNEKAASDQNKSTDELPSSTAMANSNS----ITTALLESRNQAQP 713
Query: 553 FGNMLDNNFFPDDMLTG----INNAISEKANPGAVETNVSLPSADVSEESNNN-TPYSEH 607
F N D +G +NAIS+ + N SA V+E S+ + TP
Sbjct: 714 FDVPHMNGLLSDTSKSGHSVNSSNAISQNSL-----NNFQHNSASVAEASSPSITPSPVA 768
Query: 608 ENQTAFNAPPIVTSQNSSYNTREQPSSTVLSNYVNEILSNPTPAGLDNEKLVIMTTLQTN 667
N T A I+++ S ++ PS+ E L +G+ I++ LQTN
Sbjct: 769 INSTGAPARSIISAPIDSNSSASSPSAL-------EHLEGAV-SGMSPSSTTILSNLQTN 820
Query: 668 LELAKAMGTILKHSEVQEVGLSEDSLSEMRNGYQNCIKRISKAKHFLSS----IDKKRRQ 723
+ +AK++ TI+KH+E E+ L++++++E+ Y +KRI K + L+S I+ K Q
Sbjct: 821 INIAKSLSTIMKHAESNEISLTKETINELNFNYLTLLKRIKKTRKQLNSESIKINSKNAQ 880
Query: 724 KHIEQQLLGS 733
H+E L G+
Sbjct: 881 DHLETLLSGA 890
>SPAC9E9.10c [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 514
Score = 87.4 bits (215), Expect = 7e-17
Identities = 79/396 (19%), Positives = 167/396 (41%), Gaps = 53/396 (13%)
Query: 23 QAELAQWAYQVYQLPSKPSQGTISRLLAKKSEFMNSKEHEK-DSNRLRRPNNLLVHKILQ 81
Q E+ +W + Y SQ TIS +L+ K +++ D ++R P L+ +
Sbjct: 29 QKEVTEWFRKTYN--KDLSQSTISEILSPKYSYLDDGSVRLGDIKKIRAPKFPLLDNAVY 86
Query: 82 EWVSQSIWNGIPVSLPIIQDTAQSVWHKIPAEYREGKGSFSHKWVANFLSRMNLSTHIIE 141
EW+ Q G+P+S +I+ A W KIPA FS+ W+ F R + +
Sbjct: 87 EWLQQREVEGLPISGDMIKQAATRFWSKIPAYASLPLPDFSNGWLDKFRRRHYIQQSAVN 146
Query: 142 HDMPKHPKVWYFDERTLLKQFIAQIPEDSLFTLDETFLAYNLP-----LDYAQYETNSIQ 196
+ + + +++FI + +F + T L + L LDY E ++
Sbjct: 147 QALESIKFEVFREYPVHIQEFIRPYAQKDIFCVGGTSLFWKLTPNKQNLDY--QEIQGMK 204
Query: 197 KRLEVITVMLCANLSGTEKMNPLVIGRYENYNTFKNYMGEDSHIGTNDVHLGEKTG---K 253
+ +++++C N G+E++ ++G +N +F E+ G K
Sbjct: 205 RGKAKVSLIMCCNADGSERLPLWIVGYAQNPRSF------------------EQCGIFPK 246
Query: 254 RFGIVYQSNRKSWLTSTVFHDWLVAFDKRLVSDNRKIWIILDDSCSHRXXXXXXXXXXXX 313
++ N ++ ++ + +WL FD R+ RK+ ++L+ + +++
Sbjct: 247 SMNFEWKWNGRASISPIIMEEWLRWFDTRM--QGRKVLLMLESNDTYQFGVESVRRFKGG 304
Query: 314 YTSANSRFL---------PFNWGVLEEFKARYRVQQYKALIDLQKNISQSLTDFKLLTYE 364
+ + + + PF G+++ FKA YR + + SL +L
Sbjct: 305 FQNTSVFRIPEKTLDIKSPFEQGIVDTFKANYR----------RYWLQYSLNQINILRDP 354
Query: 365 QSCLTMTNAFKFIKIAWD-AIPKERINSNWKNSGIL 399
+ + A +++ +W+ + ++ I +++ SG+L
Sbjct: 355 LKAVNVLKAIRWMLWSWNFGVSEKTIQASFLRSGLL 390
>At2g06660 [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 283
Score = 81.6 bits (200), Expect = 4e-15
Identities = 65/273 (23%), Positives = 119/273 (42%), Gaps = 49/273 (17%)
Query: 121 FSHKWVANFLSRMNL--------STHIIEHDMPKHPKVWYFDERTLLKQFIAQIPEDSLF 172
FS W+ F R + S + HDM K +V +++ I Q P +F
Sbjct: 27 FSQGWLEKFKLRHGIKSFRRFGESGSVDTHDMEKKLEV--------IREKIDQFPLKDVF 78
Query: 173 TLDETFLAYNLPLDY--AQYETNSIQKRLEVITVMLCANLSGTEKMNPLVIGRYENYNTF 230
+DET L Y L D+ A + ++ E +TV++C N G+EK+ +IG+Y F
Sbjct: 79 NMDETGLFYKLQADHSLATKQLEGRKQDKERLTVVICCNADGSEKVPLWIIGKYAKPRCF 138
Query: 231 KNYMGEDSHIGTNDVHLGEKTGKRFGIVYQSNRKSWLTSTVFHDWLVAFDKRLVSDNRKI 290
KN + G N Y+SN+++W+TS +F +++ FD ++ R++
Sbjct: 139 KNV----NMSGLN-------------CEYRSNKRAWMTSVIFEEYMRWFDNKM--HGRRV 179
Query: 291 WIILDDSCSHRXXXXXXXXXXXXYTSAN--SRFLPFNWGVLEEFKARYRVQQYKALIDLQ 348
++D+ +H + N S+ P + G++ FK YR + Y+ +++
Sbjct: 180 LFVVDNGPAHPKIIEGLQNVELFFLPPNMTSKIQPCDAGIIRAFKMHYRRRFYREILE-- 237
Query: 349 KNISQSLTDFKLLTYEQSCLTMTNAFKFIKIAW 381
++L + + + +A F AW
Sbjct: 238 --------GYELGQSDPGTINVLDAISFAVSAW 262
>SPBC14F5.12c [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 514
Score = 80.1 bits (196), Expect = 1e-14
Identities = 78/363 (21%), Positives = 151/363 (41%), Gaps = 34/363 (9%)
Query: 16 EKHPKWTQAELAQWAYQVYQLPSKPSQGTISRLLAKKSEFMNSKEHEKDSNRLRRPNNL- 74
E K +Q EL W + + K +Q T+S +L+ K+EF+++ + E R R
Sbjct: 23 ESATKPSQQELISWFEEHFH--KKLAQSTVSSILSSKNEFLDNLDAENSQIRRNRQGKYP 80
Query: 75 LVHKILQEWVSQSIWNGIPVSLPIIQDTAQSVWHKIPAEYREGKGSFSHKWVANFLSRMN 134
++ L +W ++ ++ I+ +A +W +IP FS+ W+ F R
Sbjct: 81 ILENALIDWQTRLQKQDGAITGNAIKKSAAELWRRIPEYSELPIPEFSNGWLEKFKKRCL 140
Query: 135 LSTHIIEHDMPKHPKVWYFDERTLLKQFIAQIPEDSLFTLDETFLAYNLPLDY--AQYET 192
++ + + Y + +++ I+ +F +DET L + L + A
Sbjct: 141 KHGLKLQGESTSVNQGTYEENMVQIQELISLFDPKDIFNMDETGLCWKLIPNQSPASERV 200
Query: 193 NSIQKRLEVITVMLCANLSGTEKMNPLVIGRYENYNTFKNYMGEDSHIGTNDVHLGEKTG 252
I + +TV +C N +G+EK VIG ++ F+ ++H + D H
Sbjct: 201 KGITRDKARVTVTICCNATGSEKAPLWVIGYAKSPRAFRQ---ANAHPDSMDFH------ 251
Query: 253 KRFGIVYQSNRKSWLTSTVFHDWLVAFDKRLVSDNRKIWIILDDSCSHRXXXXXXXXXXX 312
++ N + +T+++ +WL FD + RK+ +ILD +H
Sbjct: 252 ------WRYNGTARMTTSIMEEWLRWFDD--LMKGRKVLLILDKFVAHECALENIRNSER 303
Query: 313 XYTSANSRFLPFN---------WGVLEEFKARYRVQQYKALID---LQKNISQSLTDFKL 360
+ FLP N ++ FK+ YR +++ L KN S+++ K
Sbjct: 304 KLVNTTVVFLPVNSTEIYHPCGQEIVYAFKSYYRKYWLNYMLEEIRLGKNPSKTMNVLKA 363
Query: 361 LTY 363
+ +
Sbjct: 364 VRW 366
>Hs13569924 [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 521
Score = 80.1 bits (196), Expect = 1e-14
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 37/253 (14%)
Query: 161 QFIAQIPEDSLFTLDETFLAYNL----PLDYAQYETNSIQKRLEVITVMLCANLSGTEKM 216
+ IA D +F DET + + L L +K + +T + C N SGTEKM
Sbjct: 165 KLIADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKM 224
Query: 217 NPLVIGRYENYNTFKNYMGEDSHIGTNDVHLGEKTGKRFGIVYQSNRKSWLTSTVFHDWL 276
PL++GR + + KN +H Y++N+ +W+T +F++WL
Sbjct: 225 RPLIVGRSASPHCLKN------------IH-------SLPCDYRANQWAWMTRDLFNEWL 265
Query: 277 VAFDKRLVSDNRKIWIILDDSCSHRXXXXXXXXXXXXYTSANSRFL--PFNWGVLEEFKA 334
+ D R+ R+I ++L D+CS Y +N + P N G++ K
Sbjct: 266 MQVDARMKRAERRI-LLLIDNCSAHNMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKV 324
Query: 335 RYRVQQYKALIDLQKNISQSLTDFKLLTYEQSCLTMTNAFKFIKIAWDAIPKERINSNWK 394
Y+ K ++ L+ N S+ +Q + + A I AW ++ + W+
Sbjct: 325 LYQSHLLKQIL-LKLNSSE----------DQEEVDIKQAIDMIAAAWWSVKPSTVVKCWQ 373
Query: 395 NSGILPSSYLHQD 407
+GI+P + D
Sbjct: 374 KAGIVPMEFAECD 386
>Hs20537842 [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 591
Score = 79.7 bits (195), Expect = 2e-14
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 56/383 (14%)
Query: 44 TISRLLAKKSEFMNSKEHEKDSNR--LRRPNNLL--VHKILQEWVSQSIWNGIPVSLPII 99
T+S+++ K +F+ + N +R+ N+L+ + K+L W+ IP+S +I
Sbjct: 46 TVSQVVNAKEKFLKEVKSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLI 105
Query: 100 QDTAQSVWHKIPA----EYREGKGSFSHKWVANFLSRMNLSTHIIEHDMPKHPKVWYFDE 155
Q+ A ++++ + A E E K S W F R + H++ + D
Sbjct: 106 QNKALTLFNSMKAERGVEAAEEKFEASRGWFMRFKERSHF------HNIKAQGEAASADV 159
Query: 156 RTLLK--QFIAQIPED------SLFTLDET-FLAYNLP-LDYAQYETNSI---QKRLEVI 202
+ +A+I ++ +F +DET F +P + E S+ + + +
Sbjct: 160 EAAASYPEALAKIIDEGGYTKQQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRL 219
Query: 203 TVMLCANLSGTEKMNPLVIGRYENYNTFKNYMGEDSHIGTNDVHLGEKTGKRFGIVYQSN 262
T++L AN +G K+ P++I EN KNY T ++Y+ N
Sbjct: 220 TLLLGANAAGDFKLKPMLIYHSENPRALKNY-----------------TKSTLPVLYKWN 262
Query: 263 RKSWLTSTVFHDWLVAFDKRLV----SDNR---KIWIILDDSCSH-RXXXXXXXXXXXXY 314
K+ +T+ +F W + K V S+ + KI +++D++ SH R +
Sbjct: 263 SKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPSHPRALMEIYEEINVIF 322
Query: 315 TSANSRFL--PFNWGVLEEFKARY-RVQQYKALIDLQKNISQSLTDFKLLTYEQSCLTMT 371
AN+ + P + GV+ FK+ Y R +KAL + ++S KL T+ + T+
Sbjct: 323 MPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDVSDGSGQSKLKTFWKG-FTIL 381
Query: 372 NAFKFIKIAWDAIPKERINSNWK 394
+A K I+ +W+ + + WK
Sbjct: 382 DAIKNIRDSWEEVKLSTLTGVWK 404
>Hs20470774 [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 421
Score = 74.7 bits (182), Expect = 5e-13
Identities = 73/320 (22%), Positives = 138/320 (42%), Gaps = 57/320 (17%)
Query: 92 IPVSLPIIQDTAQSVWHKIPAEYREGKGSF--SHKWVANFLSRMNL---STHIIEHDMPK 146
+PV+ P+++ A K+ G F S+ W+ F SR L + + +P
Sbjct: 12 VPVNGPMLRLKANDFAQKL------GHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVPV 65
Query: 147 HPK-VWYFDERTLLKQFIAQIPEDSLFTLDETFLAYN-LPLDYAQY--ETNSIQKRL-EV 201
P VWY + +L ++ ++F + ET L Y LP + + ET S+ K +
Sbjct: 66 DPSTVWY---QNVLPYYLNDYHPKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCKDR 122
Query: 202 ITVMLCANLSGTEKMNPLVIGRYENYNTFKNYMGEDSHIGTNDVHLGEKTGKRFGIVYQS 261
IT+++ N+ G+EK+ LVIG+ + FK K + Y++
Sbjct: 123 ITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGL-------------------KSLPVCYEA 163
Query: 262 NRKSWLTSTVFHDWLVAFDKRLVSDNRKIWIILDDSCSHRXXXXXXXXXXXXYTSA-NSR 320
NR +W+TS VF W+ D+ + R++ I ++ +H + S +S+
Sbjct: 164 NRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPEVKNLKSIELAFFPSCLSSK 223
Query: 321 FLPFNWGVLEEFKARYR---VQQYKALIDLQKNISQSLTDFKLLTYEQSCLTMTNAFKFI 377
+ GV++ K +YR ++++ + ++ K + SL D A +
Sbjct: 224 CIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEFTFSLLD---------------AVDTL 268
Query: 378 KIAWDAIPKERINSNWKNSG 397
+ W A+ E I +++ +G
Sbjct: 269 HLCWRAVTPETIVKSYEEAG 288
>SPBC1105.04c [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 522
Score = 67.0 bits (162), Expect = 1e-10
Identities = 71/290 (24%), Positives = 122/290 (41%), Gaps = 39/290 (13%)
Query: 23 QAELAQWAYQVYQLPSKPSQGTISRLLAKKSEFM-NSKEHEKDSNRLRRPNNLLVHKILQ 81
Q +L +W + + SQ ++S++L+ K ++ N+ E D R R P L+ L
Sbjct: 30 QQDLIEWFREKFG--KDISQPSVSQILSSKYSYLDNTVEKPWDVKRNRPPKYPLLEAALF 87
Query: 82 EWVSQSIWNGIPVSLPIIQDTAQSVWHKIPAEYREGKGSFSHKWVANFLSRMNL------ 135
EW Q + +S I+ A +WHKIP + +FS+ W+ F R L
Sbjct: 88 EWQVQQ-GDDATLSGETIKRAAAILWHKIPEYQDQPVPNFSNGWLEGFRKRHILHAINEQ 146
Query: 136 ---STHIIEHDMPKHPKVWYFDERTLLKQFIAQIPEDSLFTLDETFLAYNL-PLDYAQYE 191
S + + P P +D L + +FT+ ET L + L P + E
Sbjct: 147 PTESVVLNNTEPPNDPLSRVYDVTRLTN-------INDIFTMQETGLFWKLVPNGTPEVE 199
Query: 192 -TNSIQKRLEVITVMLCANLSGTEKMNPLVIGRYENYNTFKNYMGEDSHIGTNDVHLGEK 250
I + IT+ +C N SGTE++ VIG ++ F+
Sbjct: 200 DIKGITRFKARITLTVCCNASGTERLPLWVIGYSQSPRVFR---------------AANV 244
Query: 251 TGKRFGIVYQSNRKSWLTSTVFHDWLVAFDKRLVSDNRKIWIILDDSCSH 300
+ ++SN K+ +T+ + +WL FD + + RK+ +++D H
Sbjct: 245 KPEVMNFKWRSNGKASMTTAIMEEWLRWFDACM--EGRKVILLIDSYTPH 292
>Hs4504807 [BD] KOG3105 DNA-binding centromere protein B (CENP-B)
Length = 442
Score = 59.7 bits (143), Expect = 2e-08
Identities = 79/344 (22%), Positives = 139/344 (39%), Gaps = 63/344 (18%)
Query: 82 EWVSQSIWNGIPVSLPIIQDTAQSVWHKIPAEYREGKGSFSHKWVANFLSRMNLSTHIIE 141
EW +Q G P+S PI A+ ++ + + G + S W+ F R ++ I
Sbjct: 3 EWFNQQRAKGNPISGPICAKRAEFFFYALGMD---GDFNPSAGWLTRFKQRHSIREINIR 59
Query: 142 HDMPKHPKVWYFDERTLLKQFIAQ--IPEDSLFTLDETFLAYN-LPLDYAQYETN----- 193
++ + D + FI + + + ++ DET L + LP + +
Sbjct: 60 NERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFWKCLPSRISVIKGKCTVPG 119
Query: 194 --SIQKRLEVITVMLCANLSGTEKMNPLVIGRYENYNTFKNYMGEDSHIGTNDVHLGEKT 251
SI++R +T+M CAN +G K+ V+G+ + +FK+ T+ ++L
Sbjct: 120 HKSIEER---VTIMCCANATGLHKLKLCVVGKAKKPRSFKS---------TDTLNL---- 163
Query: 252 GKRFGIVYQSNRKSWLTSTVFHDWLVAFDKRLVSDNR----------KIWIILDDSCSHR 301
+ Y S + +W+ ++F W FDK V R K ++LD+S +H
Sbjct: 164 ----PVSYFSQKGAWMDLSIFRQW---FDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHP 216
Query: 302 XXXXXXXXXXXXYT-----SANSRFLPFNWGVLEEFKARYRVQQYKALIDLQKNISQSLT 356
+ + S P + GV+ K YR LQ N+ +
Sbjct: 217 NENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGL------LQNNLEEG-N 269
Query: 357 DFKLLTYEQSCLTMTNAFKFIKIAWDAIPKERINSNWKNSGILP 400
D K + LT+ +A I +AW+ + I+ WK ILP
Sbjct: 270 DLKSFWKK---LTLLDALYEIAMAWNLVKPVTISRAWKK--ILP 308
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.130 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,753,673
Number of Sequences: 60738
Number of extensions: 1921292
Number of successful extensions: 4484
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4464
Number of HSP's gapped (non-prelim): 10
length of query: 765
length of database: 30,389,216
effective HSP length: 114
effective length of query: 651
effective length of database: 23,465,084
effective search space: 15275769684
effective search space used: 15275769684
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)