ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII2942 good S KOG2890 Function unknown Predicted membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII2942 1032731 1033768 346
(346 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOL107w [S] KOG2890 Predicted membrane protein 314 1e-85
At3g07950 [S] KOG2890 Predicted membrane protein 62 1e-09
7297120 [S] KOG2890 Predicted membrane protein 59 1e-08
Hs5902022 [S] KOG2890 Predicted membrane protein 50 4e-06
>YOL107w [S] KOG2890 Predicted membrane protein
Length = 342
Score = 314 bits (804), Expect = 1e-85
Identities = 155/343 (45%), Positives = 220/343 (63%), Gaps = 12/343 (3%)
Query: 1 MKFVSRHFDIYFPDAALDLGGIPPATGWLTFTYVAWTIALSIVRTRYIKEALSND--MDP 58
M++ SR ++ PD+ L++ IP AT ++T TY+ T L +R + + D +D
Sbjct: 1 MQYSSRFLELNIPDSFLNINKIPDATKFITVTYICLTATLFCIRRSLYNKLVLEDPNLDY 60
Query: 59 RLVIVPFVQMVPNRVFYNPLSLVFSNLVDIEPWKXXXXXXXXXIGGSFIERFWQSPRELA 118
L+ P +QMVP++++ P SLV SN +D + WK IGGSFIER W S +E+
Sbjct: 61 NLITSPLLQMVPSQIWRYPTSLVLSNFIDTKAWKVVVNLLNLIIGGSFIERNWNSSKEMF 120
Query: 119 KFXXXXXXXXXXXXXXXXXXXSMFSSAIRLDLPLDGNYTILVGFPIIYKQLFPETTIFET 178
KF S FS+ +RLD+PLDGNYTIL+GFPIIY+QL PETTI
Sbjct: 121 KFIIVLGSLTNVLIIMLTLLVSFFSNKVRLDIPLDGNYTILIGFPIIYRQLLPETTIIHL 180
Query: 179 KNLPFISKNFRFKLLPIFTLLVLSFVQLLWFHHFSQLLSIWITFFTCYFYLRFYQR---- 234
K F++KNFRFKLLPIF + ++ Q++WFHHF+QL SIW+TFF + YLRF+Q+
Sbjct: 181 KTPQFLAKNFRFKLLPIFVMFTMTVTQIIWFHHFAQLFSIWVTFFASWSYLRFFQKLAPL 240
Query: 235 ----LPASMAEDAEFEVVGDASETFQLIYFFPDLVKPVLEPIFDYLYQKFIVDWRIATPF 290
LP + ++ + +VGDAS+TFQLIYFFPDL+KP+L PIF+++Y +V +++ PF
Sbjct: 241 NCPSLPTTNSQGGQEILVGDASDTFQLIYFFPDLIKPILRPIFNFIYNVVVVKFKVIKPF 300
Query: 291 RVYDIEQANILAQKRGAKPVEGSEAEERRKKLALQVLEERLLD 333
DI+ N +A+ RGAK + EERR++LALQVLEER+++
Sbjct: 301 HDIDIDIGNTIAESRGAKKI--MTVEERRRQLALQVLEERMVN 341
>At3g07950 [S] KOG2890 Predicted membrane protein
Length = 384
Score = 62.0 bits (149), Expect = 1e-09
Identities = 59/271 (21%), Positives = 103/271 (37%), Gaps = 27/271 (9%)
Query: 63 VPFVQMVPNRVFYNPLSLVFSNLVDIEPWKXXXXXXXXXIGGSFIERFWQSPRELAKFXX 122
VP++ ++P R +L+ S ++ + G F+E W S L
Sbjct: 117 VPYLALIPARTIPFAWNLITSGYFELSVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFV 176
Query: 123 XXXXXXXXXXXXXXXXXSMFSSAIRLDLPLDGNYTILVGFPIIYKQLFPETTIFETKNLP 182
+ + L +P G + +L G + KQ+ P+ I K
Sbjct: 177 VNFLTYLCVFVTAIALYYITRLEVYLYMPFAGFHGVLAGLLVGIKQIIPDQEILLLK--- 233
Query: 183 FISKNFRFKLLPIFTLLVLSFVQLLWFHHFSQLLSIWITFFTCYFYLRFYQRLPASMAED 242
+ K LP L++ + L ++ + + YLR+ QR P
Sbjct: 234 -----IKAKWLPSIMLILSIASSFFTLDSAAYLPTLIFGTYMGWLYLRYLQRRP------ 282
Query: 243 AEFEVVGDASETFQLIYFFPDLVKPVLEPIFDYLYQKFIVDWRIATPFRVYDIEQANILA 302
E ++ GD S+ F FFP+L++PV++PI ++ + Y A
Sbjct: 283 -ETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLCGRSNATSEDHDYSTSGA---- 337
Query: 303 QKRGAKPVEGSEAEE--RRKKLALQVLEERL 331
P+ GS++ E RR++ + LEERL
Sbjct: 338 ------PLPGSDSAEASRRRERGARALEERL 362
>7297120 [S] KOG2890 Predicted membrane protein
Length = 450
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 28/278 (10%)
Query: 68 MVPNRVFYNPLSLVFSNLVDIEPWKXXXXXXXXXIGGSFIERFWQSPRELAKFXXXXXXX 127
++PN F+ + F +++ W+ + G +E W E+ KF
Sbjct: 57 ILPNGKFWIWTAFTFC-FIELHWWEVAVDVVTVGLCGKMLEPLW-GQLEMFKFFALSNFG 114
Query: 128 XXXXXXXXXXXXSMFSS--AIRLDLPLDGNYTILVGFPIIYKQLFPETTIFETKNLPFIS 185
M + I ++ + G + G + +Q+ P+ IF+T+ +
Sbjct: 115 VSLLTTVYYLFYYMVTKNPTILFEVHIHGLAGYVAGICVAVRQIMPDHLIFKTRYGRLTN 174
Query: 186 KNFRFKLLPIFTLLVLSFVQLLWFHHFSQLLSIWITFFTCYFYLRFYQRLPASMAEDAEF 245
+N +L ++L + LL + + S + YLRFYQ P
Sbjct: 175 RNVPLTVL--IMAIILWAIGLLDGTYPAMFAS---GSLVSWIYLRFYQHHPNGR------ 223
Query: 246 EVVGDASETFQLIYFFPDLVKPVLEPIFDYLYQKFIVDWRIATPFRVYDIEQANILA--- 302
GD+SE+F + FFP++ +P + + + +Y + + TP + I A++ +
Sbjct: 224 ---GDSSESFTFVSFFPNVSQPFISVLVNPIYNCCLRAGVVKTPTPLRTISTASLTSVSV 280
Query: 303 QKRGAKPVEGSEAEERRKKLALQVLEERLLDNKNTESS 340
Q G P + ERR+++AL+ L ERL K T+SS
Sbjct: 281 QMPGVDPHD----IERRRQIALKALSERL---KATDSS 311
>Hs5902022 [S] KOG2890 Predicted membrane protein
Length = 351
Score = 50.4 bits (119), Expect = 4e-06
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 25/274 (9%)
Query: 60 LVIVPFVQMVPNRVFYNPLSLVFSNLVDIEPWKXXXXXXXXXIGGSFIERFWQSPRELAK 119
L + P PN + +L L++ W + G +E W + L
Sbjct: 45 LAVTPGYLFPPNFWIW---TLATHGLMEQHVWDVAISLTTVVVAGRLLEPLWGALELLIF 101
Query: 120 FXXXXXXXXXXXXXXXXXXX-SMFSSAIRLDLPLDGNYTILVGFPIIYKQLFPETTIFET 178
F + F+ + + G L G + KQ + +
Sbjct: 102 FSVVNVSVGLLGAFAYLLTYMASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRV 161
Query: 179 KNLPFISKNFRFKLLPIFTLLVLSFVQLLWFHHFSQLLSIWITFFTCYFYLRFYQRLPAS 238
+ R ++P+ L +L ++L L S + + YLRFYQR
Sbjct: 162 PQV-------RVSVMPMLLLALLLLLRLATLLQSPALASYGFGLLSSWVYLRFYQRHSRG 214
Query: 239 MAEDAEFEVVGDASETFQLIYFFPDLVKPVLEPIFDYLYQKFIVDWRIATPFRVYDI-EQ 297
GD ++ F FFP++++PV+ + + ++ + + YD+
Sbjct: 215 R---------GDMADHFAFATFFPEILQPVVGLLANLVHSLLVKVKICQKTVKRYDVGAP 265
Query: 298 ANILAQKRGAKPVEGSEAEERRKKLALQVLEERL 331
++I G P + ERR++LAL+ L ERL
Sbjct: 266 SSITISLPGTDPQDA----ERRRQLALKALNERL 295
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.327 0.143 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,932,740
Number of Sequences: 60738
Number of extensions: 727850
Number of successful extensions: 2100
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2090
Number of HSP's gapped (non-prelim): 4
length of query: 346
length of database: 30,389,216
effective HSP length: 107
effective length of query: 239
effective length of database: 23,890,250
effective search space: 5709769750
effective search space used: 5709769750
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)