ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3024 good Z KOG0676 Cytoskeleton Actin and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3024 Similar to YMR033w SP|Q05123 ARP9 Actin-related
protein singleton [INTRON]
(435 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR033w [Z] KOG0676 Actin and related proteins 407 e-113
SPAC1071.06 [Z] KOG0676 Actin and related proteins 119 1e-26
Hs4757718 [Z] KOG0679 Actin-related protein - Arp4p/Act3p 47 4e-05
7302793 [Z] KOG0679 Actin-related protein - Arp4p/Act3p 45 2e-04
YJL081c [Z] KOG0679 Actin-related protein - Arp4p/Act3p 45 3e-04
CE26349 [Z] KOG0679 Actin-related protein - Arp4p/Act3p 43 0.001
Hs7705294 [Z] KOG0679 Actin-related protein - Arp4p/Act3p 42 0.001
At3g60830 [Z] KOG0676 Actin and related proteins 42 0.001
Hs5031569 [Z] KOG0676 Actin and related proteins 42 0.002
ECU01g0460 [Z] KOG0676 Actin and related proteins 41 0.004
7293622 [Z] KOG0676 Actin and related proteins 40 0.005
YHR129c [Z] KOG0676 Actin and related proteins 39 0.020
Hs11342680 [Z] KOG0676 Actin and related proteins 39 0.020
SPAC23D3.09 [Z] KOG0679 Actin-related protein - Arp4p/Act3p 37 0.044
7299669 [Z] KOG0676 Actin and related proteins 37 0.044
At2g42090 [Z] KOG0676 Actin and related proteins 37 0.058
Hs8923712 [Z] KOG0676 Actin and related proteins 36 0.099
CE25400 [Z] KOG0676 Actin and related proteins 35 0.17
SPCC550.12 [Z] KOG0680 Actin-related protein - Arp6p 35 0.29
Hs5729720 [Z] KOG0676 Actin and related proteins 35 0.29
At1g18450 [Z] KOG0679 Actin-related protein - Arp4p/Act3p 35 0.29
7303885 [U] KOG4809 Rab6 GTPase-interacting protein involved in ... 35 0.29
7293115 [Z] KOG0680 Actin-related protein - Arp6p 34 0.37
YFL039c [Z] KOG0676 Actin and related proteins 33 0.64
Hs9966913 [Z] KOG0678 Actin-related protein Arp2/3 complex subun... 33 0.64
CE04234 [Z] KOG0676 Actin and related proteins 33 0.83
CE04187_1 [I] KOG1202 Animal-type fatty acid synthase and relate... 32 1.4
CE24792 [Z] KOG0680 Actin-related protein - Arp6p 32 2.4
YBL045c [O] KOG0960 Mitochondrial processing peptidase beta subu... 31 3.2
Hs20477464 [N] KOG4108 Dynein light chain 31 4.1
7291082 [R] KOG1721 FOG: Zn-finger 31 4.1
At2g47680 [A] KOG0920 ATP-dependent RNA helicase A 30 5.4
SPAC13G7.08c [R] KOG0646 WD40 repeat protein 30 7.1
Hs13375760 [J] KOG0467 Translation elongation factor 2/ribosome ... 30 7.1
At5g42020 [O] KOG0100 Molecular chaperones GRP78/BiP/KAR2 HSP70 ... 30 7.1
At5g28540 [O] KOG0100 Molecular chaperones GRP78/BiP/KAR2 HSP70 ... 30 7.1
YOR141c [Z] KOG0797 Actin-related protein 30 9.2
At3g05360 [R] KOG0619 FOG: Leucine rich repeat 30 9.2
At1g13180 [Z] KOG0678 Actin-related protein Arp2/3 complex subun... 30 9.2
>YMR033w [Z] KOG0676 Actin and related proteins
Length = 467
Score = 407 bits (1046), Expect = e-113
Identities = 209/448 (46%), Positives = 293/448 (64%), Gaps = 13/448 (2%)
Query: 1 MVQFGIGEDTLQPPSISIPTKVYRDA--NGNFTSSVTDV-----VICPIVKGSIVDIDAF 53
+VQFG+ E+T P + IPT++YR +G++T T+ +I PI G I+DI AF
Sbjct: 20 LVQFGLNEETFTVPELEIPTQIYRTTRQDGSYTYHSTNKDNKAELIKPIQNGEIIDISAF 79
Query: 54 QYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQELLCRTAFEAMKLKH 113
FL+LI+ S+L ++ + A++ LSNIP LLI+H+SW+Q E++ + FE++++ +
Sbjct: 80 TQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINN 139
Query: 114 FVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFIRQITSGGNSINKNLQ 173
+ LP+SLA +++ SLQNC IID+G HTD++PI+DY L + I GG SIN +L+
Sbjct: 140 LIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLK 199
Query: 174 RALPNLTESQIEDLKRSDIYEILSQDIMDQYAID----NEDDEEGTLDVATIVTSGRDTX 229
+ LP + QIE LK+S I+E+LS D + D NED++EGTL+VA I+TSGRDT
Sbjct: 200 KLLPQWDDDQIESLKKSPIFEVLSDDAKKLSSFDFGNENEDEDEGTLNVAEIITSGRDTR 259
Query: 230 XXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQRFTGYEDLLKDVSKAVGQAMSQ 289
NS LE N F+D GN I V +QRF G +L+K++S VG +
Sbjct: 260 EVLEERERGQKVKNVKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNRVGLTLDN 319
Query: 290 IDDITKLKAMWENVIIVGGTSHIKGFREALLSQLLKDHIVSEPEEELYKREVDAAAKLDS 349
IDDI K KA+WEN+IIVGGT+ I GF+EALL QLLKDH++ EPEEE KRE +A + L +
Sbjct: 320 IDDINKAKAVWENIIIVGGTTSISGFKEALLGQLLKDHLIIEPEEEKSKREEEAKSVLPA 379
Query: 350 KQKKIGKVST--APILNQIEYVQPPTTIMTPKFPEYFSEWKKIGFADITFLGAQILTKQV 407
KK K T + IEYVQ PT I K+P+YF EWKK G+++I FLGAQI++KQ+
Sbjct: 380 ATKKKSKFMTNSTAFVPTIEYVQCPTVIKLAKYPDYFPEWKKSGYSEIIFLGAQIVSKQI 439
Query: 408 FGHSNNSFYVTREKYDELGPEAIWEVSF 435
F H ++FY+TREKY+ GP A+W+V F
Sbjct: 440 FTHPKDTFYITREKYNMKGPAALWDVQF 467
>SPAC1071.06 [Z] KOG0676 Actin and related proteins
Length = 523
Score = 119 bits (297), Expect = 1e-26
Identities = 115/432 (26%), Positives = 179/432 (40%), Gaps = 63/432 (14%)
Query: 39 ICPIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQ 98
I PI +G +VD +A + F K +Y +LK +D + P L+ W+ + +
Sbjct: 111 IQPIQRGRVVDWEALKAFWKHLYSLLLKDPNDTT--------FRYPVCLVIPTYWSLYDR 162
Query: 99 ELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFI 158
EL + FE ++ F I L +A G L L+IDIG TD+ PI+D +
Sbjct: 163 ELATQFFFEECQVPGFTIAYEPLMGLYAIGILHG-LVIDIGYEKTDITPILDGQIIFTAT 221
Query: 159 RQITSGGNSINKNLQRAL----------------PNLTESQIEDLKRSDIYEILSQD--- 199
+Q+ GG + ++LQ L ++TE E +K S+I +++ +
Sbjct: 222 QQLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITELFAEQVKCSEIAQVVRDEQDT 281
Query: 200 ----IMDQYAIDNEDDEEGTLDVATIVTSGRDTXXXXXXXXXXXXXXXXDNSKLETNDFF 255
+ + +N ++E+ D+ I+ SG+ D T+ F
Sbjct: 282 AKDPVKALTSTNNVEEEDPAEDIGKIIASGQTRAYLAQKEREKNGESEKDEKPDNTDVEF 341
Query: 256 DTDG----NRITVSRQRFTGYEDLLKDVSKAVGQAMSQIDDITKLKA--------MWENV 303
T V R+RF E + S I K A +WEN+
Sbjct: 342 QTIAIEPLGDCIVGRERFKICEPIFHRPSNETVSLPEAIYITIKNYAANYKRRNDLWENI 401
Query: 304 IIVGGTSHIKGFREALLSQLLKDHIVSEPEEELYKREVDAAAKLDSKQKKIGKVSTAPIL 363
I++G S I+GFRE L+ QL + +S E Y AA DS I ++T P
Sbjct: 402 IVLGCGSRIRGFRECLIQQLQFKYQLSGSLEPYY-----AAQGTDS----ILGMTTMPPT 452
Query: 364 NQIEYVQPPTTIMTPKFPEYFSEWKKIG-----FADITFLGAQILTKQVFGHSNNSFYVT 418
+ P + P+YF WK F ++ FLG I+ K F S +S YVT
Sbjct: 453 PYPALINPCKIL-----PDYFPSWKPDAGTNAMFEELAFLGGSIVAKTSFNESVSSHYVT 507
Query: 419 REKYDELGPEAI 430
E+Y + GP AI
Sbjct: 508 LEEYAQHGPTAI 519
>Hs4757718 [Z] KOG0679 Actin-related protein - Arp4p/Act3p
Length = 429
Score = 47.4 bits (111), Expect = 4e-05
Identities = 36/129 (27%), Positives = 55/129 (41%), Gaps = 14/129 (10%)
Query: 23 YRDANGNFTSSVTDVVICPIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSN 82
Y D N I P+ G + D D+FQ L YK +K E+ P+
Sbjct: 69 YIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV-------- 120
Query: 83 IPFLLISHYSW-TQFQQELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKF 141
L+S W T+ ++E L FE + F + +++ +FA G LI+D G
Sbjct: 121 ----LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGR-STGLILDSGAT 175
Query: 142 HTDVVPIMD 150
HT +P+ D
Sbjct: 176 HTTAIPVHD 184
>7302793 [Z] KOG0679 Actin-related protein - Arp4p/Act3p
Length = 425
Score = 45.4 bits (106), Expect = 2e-04
Identities = 42/197 (21%), Positives = 89/197 (44%), Gaps = 22/197 (11%)
Query: 9 DTLQPPSISIPTKVYRDANGNFTSSVTDVVICPIVKGSIVDI-DAFQYFLKLIYKSVLKQ 67
D P+ + K Y D N T +++ + +K ++D D F+ + Y +V++
Sbjct: 60 DNNATPNNADQRKFYVDTN-YVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQS 118
Query: 68 ESDDSPIAWDTALSNIPFLLISHYSWT-QFQQELLCRTAFEAMKLKHFVILPSSLANSFA 126
E + P+ L S SW + +E L FE + F ++ +++ +F+
Sbjct: 119 EPEYHPV------------LFSEASWNVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFS 166
Query: 127 YGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFIRQITSGGNSINKNLQRALPNLTESQIED 186
G L++D G HT VP+ + L+ + + GG+ +++ ++ L +
Sbjct: 167 SGRA-TALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSRQCRQHL------EKHG 219
Query: 187 LKRSDIYEILSQDIMDQ 203
+ S +Y+I S+D++ +
Sbjct: 220 IDLSPVYKIASKDVVKE 236
>YJL081c [Z] KOG0679 Actin-related protein - Arp4p/Act3p
Length = 489
Score = 44.7 bits (104), Expect = 3e-04
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 48 VDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFL--------LISHYSWTQFQ-Q 98
+ I Y LK I ++ L + D + W AL N +L L++ W + +
Sbjct: 62 IGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENR 121
Query: 99 ELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFI 158
+ E M+ + + P+S SFA G NCL++DIG V PI+D L+
Sbjct: 122 KKSLEVLLEGMQFEACYLAPTSTCVSFAAGR-PNCLVVDIGHDTCSVSPIVDGMTLSKST 180
Query: 159 RQITSGGNSINKNLQRAL 176
R+ G IN +++AL
Sbjct: 181 RRNFIAGKFINHLIKKAL 198
>CE26349 [Z] KOG0679 Actin-related protein - Arp4p/Act3p
Length = 453
Score = 42.7 bits (99), Expect = 0.001
Identities = 41/187 (21%), Positives = 79/187 (41%), Gaps = 25/187 (13%)
Query: 2 VQFGIGEDTLQPPSISIP---TKVYRDANGNFTSSVTDVVICP--------IVKGSIVDI 50
VQ + +DT++ +KV NF T +++ + +G I D
Sbjct: 60 VQEALPDDTIEKQEAMEEGDNSKVQTKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDW 119
Query: 51 DAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWT-QFQQELLCRTAFEAM 109
+ F+ ++ Y+++L + P+ L S SW + ++E L FE
Sbjct: 120 ELFEKIVEHSYENILYSNPSEHPV------------LFSESSWNDRARREKLTEIMFEKF 167
Query: 110 KLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFIRQITSGGNSIN 169
++ + + + + + FA G L++D G T VVP+ D +T + + GG+ I
Sbjct: 168 QVPAYYLSKNVVLSCFAQGRTHG-LMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLIT 226
Query: 170 KNLQRAL 176
+ L + L
Sbjct: 227 EQLAQML 233
>Hs7705294 [Z] KOG0679 Actin-related protein - Arp4p/Act3p
Length = 426
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 38 VICPIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSW-TQF 96
V+ P+ G I D + F+ L Y +K E + P+ L+S W T+
Sbjct: 81 VMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPV------------LMSEAPWNTRA 128
Query: 97 QQELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMD 150
++E L FE + F + +++ +FA G L++D G HT +P+ D
Sbjct: 129 KREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTG-LVLDSGATHTTAIPVHD 181
>At3g60830 [Z] KOG0676 Actin and related proteins
Length = 368
Score = 42.4 bits (98), Expect = 0.001
Identities = 88/453 (19%), Positives = 159/453 (34%), Gaps = 135/453 (29%)
Query: 12 QPPSISIPTKVYR------DANGNFTSSVTDVVICPIVKGSIVDIDAFQYFLK-LIYKSV 64
Q P++ IP+++ R + N T+ DV + PI +G I D DA + L+ ++Y +
Sbjct: 22 QSPAMIIPSQMKRMVDDGSSSADNPTTVFEDVTLDPIERGLIRDWDAMEDLLRYVVYTGL 81
Query: 65 LKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQELLCRTAFEAMKLKHFVILPSSLANS 124
+E ++ I + L + +E L + FE + F ++ +
Sbjct: 82 GWEEGNEGNILFTDPLCTPKAI-----------REQLVQLMFETFNVSGFYASEQAVLSL 130
Query: 125 FAYGSLQNCLIIDIG----------------------KFHTDVVPIMDYTPLTCFIRQIT 162
+A G + C +DIG + +D+ P+++ ++
Sbjct: 131 YAVGRISGC-TVDIGHGKIAGYDQDVVMSDVLTLWLIQLFSDIAPVLEGAVQHIASKRFE 189
Query: 163 SGGNSINKNLQRALPNLTESQIEDLKRSDIYEILSQDIMDQYAIDNEDDEEGTLDVATIV 222
GG + K + L S +L SD+ + + +QYA ED+
Sbjct: 190 LGGTELTKLFAQELGKTNPSM--NLSMSDV-----EKLKEQYANCAEDE----------- 231
Query: 223 TSGRDTXXXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQRFTGYEDLLKDVSKA 282
N ++E + DG + + E L++ +S
Sbjct: 232 ----------------IAYKKTQNCEIEQHTL--PDGQPSILGLEEHGIVEQLVRIISTV 273
Query: 283 VGQAMSQIDDITKLKAMWENVIIVGGTSHIKGFREALLSQLLKDHIVSEPEEELYKREVD 342
+ Q + EN ++ GGT+ + GF
Sbjct: 274 SSENHRQ---------LLENTVLCGGTTSMTGFESRF----------------------- 301
Query: 343 AAAKLDSKQKKIGKVSTAPILNQIEYVQPPTTIMTPKFPEYFSEWKKIGFADITFLGAQI 402
QK+ S+A ++P T++ P PEY E +G ++G I
Sbjct: 302 --------QKEANLCSSA--------IRP--TLVKP--PEYMPE--NLGMYS-AWVGGAI 338
Query: 403 LTKQVFGHSNNSFYVTREKYDELGPEAIWEVSF 435
L K VF + +VT+ YDE GP + F
Sbjct: 339 LAKVVFPQNQ---HVTKADYDETGPSVVHRKCF 368
>Hs5031569 [Z] KOG0676 Actin and related proteins
Length = 376
Score = 41.6 bits (96), Expect = 0.002
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 250 ETNDFFDTDGNRITVSRQRFTGYE-----DLLKDVSKAVGQAMS---QIDDITKLKAMWE 301
E ++ DG+ I + RF E DL+ + S+ + + + Q D+ + ++
Sbjct: 237 EKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFS 296
Query: 302 NVIIVGGTSHIKGFREALLSQLLK------DHIVSEPEEELYKREVDAA--AKLDSKQK 352
N+++ GG++ KGF + LLS++ K +S P+E LY + + A LD+ +K
Sbjct: 297 NIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKK 355
>ECU01g0460 [Z] KOG0676 Actin and related proteins
Length = 407
Score = 40.8 bits (94), Expect = 0.004
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 49/254 (19%)
Query: 98 QELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCF 157
+E + + FE + F I ++ + +A G ++ D G + VVPI + L
Sbjct: 148 REKITQIMFETFNVPSFYISIQAVLSLYASGRTTG-IVFDSGDGVSHVVPIYEGYSLPYA 206
Query: 158 IRQITSGGNSINKNLQRALPNLTESQIEDLKRSDIYEILSQDIMDQYAIDNEDDEEGTLD 217
I +I G + LQ L S +R + +I ++ + +++ E+D T
Sbjct: 207 INRIDLAGRDLTDYLQLILTESGNSFTTTAEREIVRDI--KEKLCYVSLNYEEDMRNTEH 264
Query: 218 VATIVTSGRDTXXXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQRFTGYEDL-- 275
+A+I T + DG I++ +RF E L
Sbjct: 265 LASI-----------------------------TKTYEMPDGQVISIGNERFRAPELLFQ 295
Query: 276 -------LKDVSKAVGQAMSQIDDITKLKAMWENVIIVGGTSHIKGFREALLSQL----- 323
LK + + + ++ + D + K ++ N+++ GGT+ G E +L+++
Sbjct: 296 PKLRGLELKGIHQNIYDSIMKCD-VDIRKELYGNIVLSGGTTMYPGLAERILNEIKALAP 354
Query: 324 --LKDHIVSEPEEE 335
+K +V+ PE +
Sbjct: 355 PVIKIGVVAPPERK 368
>7293622 [Z] KOG0676 Actin and related proteins
Length = 378
Score = 40.4 bits (93), Expect = 0.005
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 85 FLLISHYSWTQFQQELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTD 144
F+L+ + + +E L R F + + +P L + + ++ L++D+G T
Sbjct: 86 FVLVENVFGSTVLRETLARVLFVHFDVSSVLFVPVHLI-ALSTLAVPTALVVDVGYSETS 144
Query: 145 VVPIMDYTPLTCFIRQITSGGNSINKNLQRALPN-------LTESQIEDLK 188
V+P+ + + + GG++I+ ++R L LTES +ED+K
Sbjct: 145 VMPVFSGVQIMAAFKDQSYGGSAIHAEIKRQLVESGVKESLLTESVLEDIK 195
>YHR129c [Z] KOG0676 Actin and related proteins
Length = 384
Score = 38.5 bits (88), Expect = 0.020
Identities = 58/296 (19%), Positives = 102/296 (33%), Gaps = 58/296 (19%)
Query: 41 PIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQEL 100
PI G + D D+ + + VL+ ++ + P L+ +E
Sbjct: 77 PIKHGVVEDWDSMELIWSYVLNEVLQLQN----------IGEHPLLITEAPMNPLKNREQ 126
Query: 101 LCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFIRQ 160
+ + FE + + ++ + +A G C ++D G+ + VPI D L + +
Sbjct: 127 MAQVLFETFDVSALYVSNPAVLSLYASGRTTGC-VVDCGEGYCSTVPIYDGFALPASMMR 185
Query: 161 ITSGGNSINKNLQRALPNLTESQIEDLKRSDIYEILSQDIMDQYAIDNEDDEE-----GT 215
+ GG I + LQ L + +I + + + Y N EE GT
Sbjct: 186 MDIGGADITEQLQFQLRKSAGVSLFSSSEREIVRTMKEKVC--YLAKNIKKEEEKYLQGT 243
Query: 216 LDVATIVTSGRDTXXXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQRFTGYEDL 275
D+ + F DG I V R+ E L
Sbjct: 244 QDL--------------------------------ISTFKLPDGRCIEVGNDRYRAPEIL 271
Query: 276 LKDVSKAVG------QAMSQI--DDITKLKAMWENVIIVGGTSHIKGFREALLSQL 323
+G M I D+ K + ++I+ GGT+ +KGF + +L L
Sbjct: 272 FSPQIIGLGYDGLSDMCMQSIWKVDLDLRKPLLSSIILSGGTTTLKGFGDRMLWDL 327
>Hs11342680 [Z] KOG0676 Actin and related proteins
Length = 376
Score = 38.5 bits (88), Expect = 0.020
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 16/111 (14%)
Query: 258 DGNRITVSRQRFTGYE-----DLLKDVSKAVGQAMS---QIDDITKLKAMWENVIIVGGT 309
DG+ + V RF E DL+ D S+ + + ++ D+ + ++ N+++ GG+
Sbjct: 245 DGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGS 304
Query: 310 SHIKGFREALLSQLLK------DHIVSEPEEELYKREVDAA--AKLDSKQK 352
+ KGF + LLS++ K +S P+E LY + + A LD+ +K
Sbjct: 305 TLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKK 355
>SPAC23D3.09 [Z] KOG0679 Actin-related protein - Arp4p/Act3p
Length = 430
Score = 37.4 bits (85), Expect = 0.044
Identities = 23/90 (25%), Positives = 47/90 (51%), Gaps = 2/90 (2%)
Query: 86 LLISHYSWT-QFQQELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTD 144
++I+ SW Q ++ + AFE + + F + ++ +FA S LI+DIG +
Sbjct: 104 MMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFA-NSKSTALIVDIGSDNAS 162
Query: 145 VVPIMDYTPLTCFIRQITSGGNSINKNLQR 174
V P++D + I + + G+ +N N+++
Sbjct: 163 VTPVVDGLIIRKGIFKQSLAGDFLNANIEQ 192
>7299669 [Z] KOG0676 Actin and related proteins
Length = 376
Score = 37.4 bits (85), Expect = 0.044
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 258 DGNRITVSRQRFTGYE-----DLLKDVSKAVGQAMS---QIDDITKLKAMWENVIIVGGT 309
DG + RF E DLL + + + + + D+ K +++N+++ GG+
Sbjct: 245 DGKIFEIGPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGS 304
Query: 310 SHIKGFREALLSQLLKDHI------VSEPEEELYKREVDAA--AKLDSKQK 352
+ KGF + LLS+L K ++ P+E LY + + A LD+ +K
Sbjct: 305 TLFKGFGDRLLSELKKHSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKK 355
>At2g42090 [Z] KOG0676 Actin and related proteins
Length = 366
Score = 37.0 bits (84), Expect = 0.058
Identities = 69/363 (19%), Positives = 135/363 (37%), Gaps = 75/363 (20%)
Query: 1 MVQFGIGEDTLQPPSISIPTKVYRDANG-NFTSSVT--------DVVIC--PIVKGSIVD 49
MVQ G D + P + P V R +G N S D++ P+ G + +
Sbjct: 12 MVQAGFAGD--EAPKVVFPCVVGRPRDGLNPNESYVGEEGHANRDILTLKDPMEHGIVNN 69
Query: 50 IDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQELLCRTAFEAM 109
D + + + L+ + ++ P+ A N + +E + + FE+
Sbjct: 70 WDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYN-----------PKANREKMTQIMFESF 118
Query: 110 KLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFIRQITSGGNSIN 169
+ + S+ ++ G +++D+G+ + VP+ + L I ++ GG +
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTG-VVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLT 177
Query: 170 KNLQRALPNLTESQIEDLKRSDIYEILSQDIMDQYAIDNEDDEEGTLDVATIVTSGRDTX 229
L + + +R + +I ++ + A+D E + E T TI
Sbjct: 178 DYLIEIMTERGYTYTTSAEREIVRDI--KEKLCYVALDYEQEMEKTTKGWTI-------- 227
Query: 230 XXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQRFTGYEDLLKDVSKAVGQAMSQ 289
+ DG IT+ +RF E L + +G+ S
Sbjct: 228 ---------------------DKTYVLPDGQEITIEAERFMCPEVLFQP--SVIGKESSG 264
Query: 290 IDDITK----------LKAMWENVIIVGGTSHIKGFRE-------ALLSQLLKDHIVSEP 332
I + T+ + M+ N+++ GGT+ + G +E AL+ +K +V P
Sbjct: 265 IHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPP 324
Query: 333 EEE 335
E E
Sbjct: 325 ESE 327
>Hs8923712 [Z] KOG0676 Actin and related proteins
Length = 417
Score = 36.2 bits (82), Expect = 0.099
Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 24/245 (9%)
Query: 98 QELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCF 157
+E L R F+ ++ ++ PS L G + + +++D G + V+PI + P+
Sbjct: 102 RETLTRVLFKYFEVPSVLLAPSHLMALLTLG-INSAMVLDCGYRESLVLPIYEGIPVLNC 160
Query: 158 IRQITSGGNSINKNLQRALPNLTESQIEDLKRSDIYEILSQDIMDQYAIDNEDDEEGTLD 217
+ GG +++K L+ L K + ++ EG L+
Sbjct: 161 WGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMG------------SVPEGVLE 208
Query: 218 VATIVTSGRDTXXXXXXXXXXXXXXXXDNSKLE--TNDFFDTDGNRI--TVSRQRFTGYE 273
T +N + N + DG +I + R + E
Sbjct: 209 DIKARTCFVSDLKRGLKIQAAKFNIDGNNERPSPPPNVDYPLDGEKILHILGSIRDSVVE 268
Query: 274 DLLKDVSKAVGQAMSQIDDITKL-----KAMWENVIIVGGTSHIKGFREALLSQLLKDHI 328
L + ++ A +D + + K + EN++++GGTS + GF LL+++ ++
Sbjct: 269 ILFEQDNEEQSVATLILDSLIQCPIDTRKQLAENLVVIGGTSMLPGFLHRLLAEI--RYL 326
Query: 329 VSEPE 333
V +P+
Sbjct: 327 VEKPK 331
>CE25400 [Z] KOG0676 Actin and related proteins
Length = 375
Score = 35.4 bits (80), Expect = 0.17
Identities = 21/90 (23%), Positives = 45/90 (49%), Gaps = 10/90 (11%)
Query: 245 DNSKLETNDFFDTDGNRITVSRQRFTGYEDLLKD---------VSKAVGQAMSQIDDITK 295
+N+ ++ + + D +I +S F E L K ++ V Q++ + D +
Sbjct: 231 ENNSVKVSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCD-VDL 289
Query: 296 LKAMWENVIIVGGTSHIKGFREALLSQLLK 325
+ ++ N+++ GGT+ KGF + LL ++ K
Sbjct: 290 RQTLYSNIVLSGGTTLFKGFGDRLLGEMRK 319
>SPCC550.12 [Z] KOG0680 Actin-related protein - Arp6p
Length = 401
Score = 34.7 bits (78), Expect = 0.29
Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 23/199 (11%)
Query: 134 LIIDIGKFHTDVVPIMDYTPLTCFIRQITSGGNSINKNLQRALP----NLTESQ--IEDL 187
L+ID G T ++P++D++ ++++ GG + L+ + N+ E + ++
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNMMEETYIVNEI 218
Query: 188 KRSDIYEILSQDIMDQYAIDNEDDEEGTLDVATIVTSGRDTXXXXXXXXXXXXXXXXDNS 247
K S Y +SQ+ + I +E L++ + N
Sbjct: 219 KESVCY--VSQNFKEDMEICHE-KPRSKLEICYALPD--------YSTGKHGYIVRDINQ 267
Query: 248 KLETNDFFDTDGNRITVSRQRFTGYEDLLKD--VSKAVGQAMSQIDDITKLKAM-WENVI 304
K+E + R + F+ + +++ + +AV Q+++ + ++AM ENV+
Sbjct: 268 KIE-QQVLNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSVTHFPE--NIQAMLLENVV 324
Query: 305 IVGGTSHIKGFREALLSQL 323
+GG GF + L S+L
Sbjct: 325 TIGGNCKFPGFHKRLSSEL 343
>Hs5729720 [Z] KOG0676 Actin and related proteins
Length = 435
Score = 34.7 bits (78), Expect = 0.29
Identities = 63/301 (20%), Positives = 120/301 (38%), Gaps = 68/301 (22%)
Query: 38 VICPIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQ 97
++ P+ G IVD D Q I++ + +QE +P +S+ P L H + ++
Sbjct: 131 LVNPLRHGIIVDWDTVQD----IWEYLFRQEMKIAPEEHAVLVSDPP--LSPHTNREKYA 184
Query: 98 QELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCF 157
+ L FEA I S + ++YG L++++G + VVPI + PL
Sbjct: 185 EML-----FEAFNTPAMHIAYQSRLSMYSYGRTSG-LVVEVGHGVSYVVPIYEGYPLPSI 238
Query: 158 IRQITSGGNSINKNLQRALPN----LTESQ---IEDLKRSDIYEILSQDIMDQYAIDNED 210
++ G+ + L L + T+ Q +ED+K+ + A+D +
Sbjct: 239 TGRLDYAGSDLTAYLLGLLNSAGNEFTQDQMGIVEDIKKKCCF----------VALDPIE 288
Query: 211 DEEGTLDVATIVTSGRDTXXXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQRFT 270
+++ L TI + DG I + ++RF
Sbjct: 289 EKKVPLSEHTI-------------------------------RYVLPDGKEIQLCQERFL 317
Query: 271 GYE-----DLLKDVSKAV-GQAMSQID--DITKLKAMWENVIIVGGTSHIKGFREALLSQ 322
E L+K + + Q +S ++ DI + + N+++ GG++ + GF L +
Sbjct: 318 CSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKE 377
Query: 323 L 323
L
Sbjct: 378 L 378
>At1g18450 [Z] KOG0679 Actin-related protein - Arp4p/Act3p
Length = 440
Score = 34.7 bits (78), Expect = 0.29
Identities = 57/280 (20%), Positives = 100/280 (35%), Gaps = 59/280 (21%)
Query: 84 PFLLISHYSWTQFQQELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHT 143
P LL TQ Q+E FE K+ + + + SFA G + L++D G T
Sbjct: 125 PMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATS-LVVDCGGGST 183
Query: 144 DVVPIMD---------YTPL------TCFIRQITSGGNSINK--NLQRALPNLTESQIED 186
+ P+ D +PL C ++ + S G I + +R E Q+ED
Sbjct: 184 TISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVED 243
Query: 187 LKRSDIYEILSQDIMDQYAIDNEDDEEGTLDVATIVTSGRDTXXXXXXXXXXXXXXXXDN 246
+ D E S + Q I D+ + DT
Sbjct: 244 VDIPDTTE--SYKLFCQRMIVG--------DIKDSICRVPDTPYDDKSY----------- 282
Query: 247 SKLETNDFFDTDGNRITVSRQRF------------------TGYEDLLKDVSKAVGQAMS 288
S + T + DG + + RF Y +++ V M
Sbjct: 283 SNIPTTSYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVME 342
Query: 289 QID--DITKLKAMWENVIIVGGTSHIKGFREALLSQLLKD 326
I+ D+ + ++ ++++ GGTS ++ +E L L+++
Sbjct: 343 SINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEE 382
>7303885 [U] KOG4809 Rab6 GTPase-interacting protein involved in
endosome-to-TGN transport
Length = 1456
Score = 34.7 bits (78), Expect = 0.29
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 250 ETNDFFDTDGNRITVSRQRFTGYEDLLKDVSKAVGQAMSQIDDITKLKAMWENVIIVGGT 309
E D D +I+V +++ EDLLK+ V A +++ + + E +
Sbjct: 118 ELKDHMDIKDRKISVLQRKIENLEDLLKEKDNQVDMARARLSAMQAHHSSSEGALT--SL 175
Query: 310 SHIKGFREALLSQL--LKDHIVSEPEEE--LYKREV-DAAAKLDSKQKKIGKVST 359
G +E ++QL +D E +EE L++REV D KL + + ++ K+ T
Sbjct: 176 EEAIGDKEKQMAQLRDQRDRAEHEKQEERDLHEREVADYKIKLRAAESEVEKLQT 230
>7293115 [Z] KOG0680 Actin-related protein - Arp6p
Length = 398
Score = 34.3 bits (77), Expect = 0.37
Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 27/205 (13%)
Query: 132 NCLIIDIGKFHTDVVPIMDYTPLTCFIRQITSGGNSINKNLQ-----RALPNLTESQIED 186
NC+IID+G T VVP + + IR+I GG ++ L+ R L + ES + +
Sbjct: 152 NCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRHLNVMDESHVVN 211
Query: 187 LKRSDIYEILSQDIMDQYAIDNEDDEEGTLDVATIVTSGRDTXXXXXXXXXXXXXXXXDN 246
+ D+ +++D + +++ + V ++ D D
Sbjct: 212 QIKEDVC-FVAEDFKQAMQVHYSEEKRREVTVDYVLP---DFTTVKRGYVRVPGKPREDE 267
Query: 247 SKLETNDFFDTDGNRITVSRQRFTGYEDLLKDVSKAVGQAMSQIDDITKLKAM-WE---- 301
+ + +++ +RFT E L V Q LKA WE
Sbjct: 268 EQQQ----------MVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRE 317
Query: 302 ---NVIIVGGTSHIKGFREALLSQL 323
N++IVGG++ GF L L
Sbjct: 318 LLLNILIVGGSAQFPGFLPRLKRDL 342
>YFL039c [Z] KOG0676 Actin and related proteins
Length = 375
Score = 33.5 bits (75), Expect = 0.64
Identities = 59/312 (18%), Positives = 112/312 (34%), Gaps = 62/312 (19%)
Query: 41 PIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQEL 100
PI G + + D + + + L+ ++ P+ A N + +E
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMN-----------PKSNREK 118
Query: 101 LCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFIRQ 160
+ + FE + F + ++ + ++ G +++D G T VVPI L I +
Sbjct: 119 MTQIMFETFNVPAFYVSIQAVLSLYSSGRTTG-IVLDSGDGVTHVVPIYAGFSLPHAILR 177
Query: 161 ITSGGNSINKNLQRALPNLTESQIEDLKRSDIYEILSQDIMDQYAIDNEDDEEGTLDVAT 220
I G + L + L S +R + +I ++ + A+D E + + ++
Sbjct: 178 IDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDI--KEKLCYVALDFEQEMQTAAQSSS 235
Query: 221 IVTSGRDTXXXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQRFTGYEDLLKDVS 280
I S + DG IT+ +RF E L
Sbjct: 236 IEKS-----------------------------YELPDGQVITIGNERFRAPEALFHP-- 264
Query: 281 KAVGQAMSQID----------DITKLKAMWENVIIVGGTSHIKGFRE-------ALLSQL 323
+G + ID D+ K ++ N+++ GGT+ G E AL
Sbjct: 265 SVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSS 324
Query: 324 LKDHIVSEPEEE 335
+K I++ PE +
Sbjct: 325 MKVKIIAPPERK 336
>Hs9966913 [Z] KOG0678 Actin-related protein Arp2/3 complex subunit Arp3
Length = 418
Score = 33.5 bits (75), Expect = 0.64
Identities = 71/349 (20%), Positives = 129/349 (36%), Gaps = 81/349 (23%)
Query: 41 PIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQEL 100
PI G I D D + F++ + L+ E +D FL+ T +E
Sbjct: 77 PIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHY-----------FLMTEPPLNTPENREY 125
Query: 101 LCRTAFEAMKLKH-FVILPSSLANSFAYGSLQ------NCLIIDIGKFHTDVVPIMDYTP 153
L FE+ + ++ + + LA + ++ S Q ++ID G T V+P+ +
Sbjct: 126 LAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYV 185
Query: 154 LTCFIRQITSGGNSINKNLQRALPNL-----TESQIEDLKR-SDIYEILSQDIMDQYAID 207
+ I+ I G I +Q+ L E +E K + Y + DI+ ++A
Sbjct: 186 IGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKY 245
Query: 208 NEDDEEGTLDVATIVTSGRDTXXXXXXXXXXXXXXXXDNSKLETNDFFDTDGNRITVSRQ 267
+ D + I + + F I V +
Sbjct: 246 DVDPRKWIKQYTGI-------------------------NAINQKKFV------IDVGYE 274
Query: 268 RFTGYE----------DLLKDVSKAVGQAMSQIDDITKLKAMWENVIIVGGTSHIKGFRE 317
RF G E D ++ +S V + + Q I + +++NV++ GG++ + F
Sbjct: 275 RFLGPEIFFHPEFANPDFMESISDVVDEVI-QNCPIDVRRPLYKNVVLSGGSTMFRDFGR 333
Query: 318 ALLSQLLKDHIVSEPEEELYKREVDAAAKLDSKQKKIGKVSTAPILNQI 366
L L KR VDA +L S++ G++ P+ Q+
Sbjct: 334 RLQRDL--------------KRVVDARLRL-SEELSGGRIKPKPVEVQV 367
>CE04234 [Z] KOG0676 Actin and related proteins
Length = 305
Score = 33.1 bits (74), Expect = 0.83
Identities = 30/134 (22%), Positives = 59/134 (43%), Gaps = 21/134 (15%)
Query: 101 LCRTAFEAMKLKHFVILPSSLANSFAYGSLQNCLIIDIGKFHTDVVPIMD-YTPLTCFIR 159
+ + E ++ K + +PS + +F + + QN L++DIG VPI++ T L F
Sbjct: 9 ITKIVVEKIRCKSLMFMPSHVCATFPFNT-QNALVVDIGHSECIAVPIIEGVTMLNEFES 67
Query: 160 QITSGGNSINKNLQRALPN-------------LTESQIEDLKRSDIYEILSQDI--MDQY 204
+ G + + ++ + +TE+ +D+ + E LS + +D+
Sbjct: 68 ARSICGRQLERRVREQMEKYGQIAELNGERRAITENDWQDIDACKLIETLSLSLICLDKE 127
Query: 205 AIDN----EDDEEG 214
+N E EEG
Sbjct: 128 RAENWTKWEASEEG 141
>CE04187_1 [I] KOG1202 Animal-type fatty acid synthase and related proteins
Length = 6549
Score = 32.3 bits (72), Expect = 1.4
Identities = 22/70 (31%), Positives = 35/70 (49%), Gaps = 4/70 (5%)
Query: 143 TDVVPIM---DYTPLTCFIRQITSGGNS-INKNLQRALPNLTESQIEDLKRSDIYEILSQ 198
+ VVP++ DY CF+ +T G+ I + L +LP L S++ + S LSQ
Sbjct: 6425 SSVVPLLGNFDYASANCFVEALTKQGSKYIKQFLTLSLPPLEGSRMYESSTSSTKHNLSQ 6484
Query: 199 DIMDQYAIDN 208
+M Q + N
Sbjct: 6485 ILMFQEELTN 6494
>CE24792 [Z] KOG0680 Actin-related protein - Arp6p
Length = 432
Score = 31.6 bits (70), Expect = 2.4
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 279 VSKAVGQAMSQIDDITKLKAMWENVIIVGGTSHIKGFREAL 319
V++AV +++ Q + + A+ EN+I++GG+S GFRE L
Sbjct: 303 VAEAVIESICQCPEALR-PALAENIIVIGGSSCFPGFRERL 342
>YBL045c [O] KOG0960 Mitochondrial processing peptidase beta subunit and
related enzymes (insulinase superfamily)
Length = 457
Score = 31.2 bits (69), Expect = 3.2
Identities = 22/74 (29%), Positives = 36/74 (47%), Gaps = 10/74 (13%)
Query: 248 KLETNDFFDTDGNRITVSRQRFTGYEDLLKDVSKAVGQAMSQIDDITKL-------KAMW 300
KL+ +++ GN V+ G E L+K ++G+A +ID IT K +W
Sbjct: 371 KLQLGQLYES-GN--PVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLW 427
Query: 301 ENVIIVGGTSHIKG 314
+ I + GT I+G
Sbjct: 428 DQDIAIAGTGQIEG 441
>Hs20477464 [N] KOG4108 Dynein light chain
Length = 179
Score = 30.8 bits (68), Expect = 4.1
Identities = 28/101 (27%), Positives = 45/101 (43%), Gaps = 7/101 (6%)
Query: 245 DNSKLETNDFFDTDGNRITVSRQRFTGYE--DLLKDVSKAVG--QAMSQIDDITKLKAMW 300
DN+K + G+ ++S F E +KD V + SQ DDI++L
Sbjct: 5 DNAKGRAAHSWKKRGSISSLSNHEFWRKEIHGRIKDSMSTVSYMEEPSQRDDISRLTVQM 64
Query: 301 ENVIIVGGTSHIKGFREALLSQLLKDHIVSEPEEELYKREV 341
EN +G H F ++ +LKD + S + E Y+ E+
Sbjct: 65 ENTYQLGPPKH---FPVVTVNHILKDVVTSYLQVEEYEPEL 102
>7291082 [R] KOG1721 FOG: Zn-finger
Length = 644
Score = 30.8 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (51%), Gaps = 6/59 (10%)
Query: 320 LSQLLKDHIVSEPEEELY----KREVDAAAKLDSKQKKIGKVSTAPILNQIEYVQPPTT 374
LS+ K H + +++ K + AA KL+ K+KK GK T P+ + + QP TT
Sbjct: 406 LSKHKKTHFKDKKSKKVLAAEAKEQAAAAIKLEKKEKKSGKPLTPPV--EFKQEQPDTT 462
>At2g47680 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1015
Score = 30.4 bits (67), Expect = 5.4
Identities = 20/82 (24%), Positives = 41/82 (49%), Gaps = 4/82 (4%)
Query: 31 TSSVTDVVICPIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISH 90
TSS ++ + C S+ D F + L Y++++ + ++PI W+ + FL
Sbjct: 844 TSSSSETLFCD---SSLADTRIF-WGLNHPYQTIISKAGRENPIPWNEVKCVLWFLNPDS 899
Query: 91 YSWTQFQQELLCRTAFEAMKLK 112
Y+ T +Q+ + + FE M ++
Sbjct: 900 YADTPEKQKTILQNFFEHMAIR 921
>SPAC13G7.08c [R] KOG0646 WD40 repeat protein
Length = 446
Score = 30.0 bits (66), Expect = 7.1
Identities = 28/143 (19%), Positives = 62/143 (42%), Gaps = 12/143 (8%)
Query: 64 VLKQESDDSPIAWDTALSNIPFLLISHYSWTQFQQELLCRTAFEAMKLKHFVILPSSLAN 123
++ + D + + WD+ + L+ +YS F Q + + +F + F +L + N
Sbjct: 311 LISGDKDGNVLVWDSVSRQVLRRLVQYYSPVSFLQCKVDKISFYSNSSLSFPVLKRMITN 370
Query: 124 SFAYGSLQNCLIIDIGKFHTDVVPIMDYTPLTCFIRQITSGGNSINKNLQRALPNLTESQ 183
+ ++ C+ D V +M + I + G +++ RA +E Q
Sbjct: 371 EYLNSDVRICIQDD------GVEQLMQPENILKISSDIVTQG---SESSWRAKAETSEMQ 421
Query: 184 IEDLKRSDIYEI--LSQDIMDQY 204
+++ KR YE+ + Q + ++Y
Sbjct: 422 LKEAKRL-FYELKQIHQALWEKY 443
>Hs13375760 [J] KOG0467 Translation elongation factor 2/ribosome biogenesis
protein RIA1 and related proteins
Length = 857
Score = 30.0 bits (66), Expect = 7.1
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 301 ENVIIVGGTSHIKGFREALLSQLLKDHI-VSEPEEELYKREVDAAAKLDSKQKKIGKVST 359
E+V++ G H++ + L + K HI VSEP ++ + K+D ++IGK
Sbjct: 393 EHVLVTAGEVHLQRCLDDLKERFAKIHISVSEPIIP-FRETITKPPKVDMVNEEIGKQQK 451
Query: 360 APILNQIE 367
+++Q++
Sbjct: 452 VAVIHQMK 459
>At5g42020 [O] KOG0100 Molecular chaperones GRP78/BiP/KAR2 HSP70 superfamily
Length = 668
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 248 KLETNDFFDTDGNRITVSRQRFTGYEDLLKDV-SKAVGQAMSQIDDITKLKAMWENVIIV 306
++E FD ++R RF E+L D+ K +G +DD K+ + +++V
Sbjct: 312 RVEIESLFDGVDLSEPLTRARF---EELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLV 368
Query: 307 GGTSHIKGFREALLSQLLKD 326
GG++ I + QLLKD
Sbjct: 369 GGSTRI-----PKVQQLLKD 383
>At5g28540 [O] KOG0100 Molecular chaperones GRP78/BiP/KAR2 HSP70 superfamily
Length = 669
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 248 KLETNDFFDTDGNRITVSRQRFTGYEDLLKDV-SKAVGQAMSQIDDITKLKAMWENVIIV 306
++E FD ++R RF E+L D+ K +G +DD K+ + +++V
Sbjct: 312 RVEIESLFDGVDFSEPLTRARF---EELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLV 368
Query: 307 GGTSHIKGFREALLSQLLKD 326
GG++ I + QLLKD
Sbjct: 369 GGSTRI-----PKVQQLLKD 383
>YOR141c [Z] KOG0797 Actin-related protein
Length = 881
Score = 29.6 bits (65), Expect = 9.2
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 21/104 (20%)
Query: 272 YEDLLKD----VSKAVGQAMSQID---DITKLKAMWENVIIVGGTSHIKG---------- 314
Y + LK+ + KA+ Q+++ D+T++ + + N++IVGG+S I
Sbjct: 692 YGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 751
Query: 315 -FREALLSQLLKDHIVSEPEEELYKRE---VDAAAKLDSKQKKI 354
+R +LLS + +E+ E V+A K + + K+I
Sbjct: 752 IWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQI 795
>At3g05360 [R] KOG0619 FOG: Leucine rich repeat
Length = 786
Score = 29.6 bits (65), Expect = 9.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 158 IRQITSGGNSINKNLQRALPNLTESQIEDLKRSDIYEILSQDI 200
+R + GNS N+ ++L NLT + DL R+ + + +D+
Sbjct: 624 LRLLNLSGNSFTSNIPQSLANLTNLETLDLSRNQLSGHIPRDL 666
>At1g13180 [Z] KOG0678 Actin-related protein Arp2/3 complex subunit Arp3
Length = 427
Score = 29.6 bits (65), Expect = 9.2
Identities = 40/192 (20%), Positives = 75/192 (38%), Gaps = 24/192 (12%)
Query: 32 SSVTDVVICPIVKGSIVDIDAFQYFLKLIYKSVLKQESDDSPIAWDTALSNIPFLLISHY 91
SS T + PI G + D DA + + + + L+ + +D FLL
Sbjct: 80 SSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHY-----------FLLTESP 128
Query: 92 SWTQFQQELLCRTAFEAMKLKHFVILPSSLANSFAYGSLQNC----LIIDIGKFHTDVVP 147
+E FE + I +S+ A + C +++D+G T VVP
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVP 188
Query: 148 IMDYTPLTCFIRQITSGGNSINKNLQRAL----PNLTESQIEDLKR--SDIYEILSQDIM 201
+ + + I+ I G + +Q+ + N+ D+ R ++Y DI+
Sbjct: 189 VAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIV 248
Query: 202 DQYAIDNEDDEE 213
++ N+ D+E
Sbjct: 249 KEF---NKHDKE 257
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,672,145
Number of Sequences: 60738
Number of extensions: 1059619
Number of successful extensions: 3075
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 3040
Number of HSP's gapped (non-prelim): 63
length of query: 435
length of database: 30,389,216
effective HSP length: 109
effective length of query: 326
effective length of database: 23,768,774
effective search space: 7748620324
effective search space used: 7748620324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)