ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3117 good U KOG2667 Intracellular trafficking, secretion, and vesicular transport COPII vesicle protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3117 1096922 1098136 405
(405 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YAL042w [U] KOG2667 COPII vesicle protein 568 e-162
SPAC24B11.08c [U] KOG2667 COPII vesicle protein 252 6e-67
Hs7706278 [U] KOG2667 COPII vesicle protein 224 2e-58
CE12012 [U] KOG2667 COPII vesicle protein 207 3e-53
At1g36050 [U] KOG2667 COPII vesicle protein 201 2e-51
At1g22200 [U] KOG2667 COPII vesicle protein 192 7e-49
7294304 [U] KOG2667 COPII vesicle protein 184 2e-46
Hs20553406 [U] KOG2667 COPII vesicle protein 92 1e-18
Hs7706105 [U] KOG2667 COPII vesicle protein 90 7e-18
At3g22290 [U] KOG2667 COPII vesicle protein 84 4e-16
YML067c [U] KOG2667 COPII vesicle protein 63 9e-10
SPBC2G5.04c [U] KOG2667 COPII vesicle protein 58 2e-08
CE27226 [U] KOG2667 COPII vesicle protein 58 3e-08
Hs17435487 [U] KOG2667 COPII vesicle protein 57 4e-08
At4g27080 [U] KOG2667 COPII vesicle protein 55 2e-07
7290051 [U] KOG2667 COPII vesicle protein 55 2e-07
>YAL042w [U] KOG2667 COPII vesicle protein
Length = 415
Score = 568 bits (1463), Expect = e-162
Identities = 267/415 (64%), Positives = 331/415 (79%), Gaps = 12/415 (2%)
Query: 1 MKKSPLLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVD 60
MK+S LLS+DAF KTEEDVRVRTR GGLIT+SCI+ T+ LLV+EW QF+++VTRP LVVD
Sbjct: 1 MKRSTLLSLDAFAKTEEDVRVRTRAGGLITLSCILTTLFLLVNEWGQFNSVVTRPQLVVD 60
Query: 61 RDRHLKLDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGFTKIRISPEGKELSKE-K 119
RDRH KL+LN+DVTFPSMPC+++NLDI+DDSGE Q+++LD+GFT R++ EG+ + +
Sbjct: 61 RDRHAKLELNMDVTFPSMPCDLVNLDIMDDSGEMQLDILDAGFTMSRLNSEGRPVGDATE 120
Query: 120 FQVGDKSSKQS--FNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAF 177
VG + N+ YCGPCYGA DQS+N+ L Q++KVCCQ CD VR+AY + GWAF
Sbjct: 121 LHVGGNGDGTAPVNNDPNYCGPCYGAKDQSQNENLAQEEKVCCQDCDAVRSAYLEAGWAF 180
Query: 178 KDGKGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTS 237
DGK +EQCEREGYV IN ++EGCR++G AQ+NRIQG +HF PG +N GHFHDTS
Sbjct: 181 FDGKNIEQCEREGYVSKINEHLNEGCRIKGSAQINRIQGNLHFAPGKPYQNAYGHFHDTS 240
Query: 238 LYDAYPHLNFNHIINTLTFGEKPKDGDSELIGS--------ASISPLDSRQVFPDRDTHF 289
LYD +LNFNHIIN L+FG KP S+L+G+ + SPLD RQVFPDR+THF
Sbjct: 241 LYDKTSNLNFNHIINHLSFG-KPIQSHSKLLGNDKRHGGAVVATSPLDGRQVFPDRNTHF 299
Query: 290 HEFSYFCKIIPTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFN 349
H+FSYF KI+PTR+E+LD +ET QFSAT+H RPL GGRD+DHPNT+H +GG+PG+F
Sbjct: 300 HQFSYFAKIVPTRYEYLDNVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPGMFVF 359
Query: 350 FEMSPLKVINKEQHATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQKSIWGKKS 404
FEMSPLKVINKEQH +WSGF+LNCITSIGGVLAVGTV+DK+ Y+AQ+SIWGKKS
Sbjct: 360 FEMSPLKVINKEQHGQTWSGFILNCITSIGGVLAVGTVMDKLFYKAQRSIWGKKS 414
>SPAC24B11.08c [U] KOG2667 COPII vesicle protein
Length = 390
Score = 252 bits (644), Expect = 6e-67
Identities = 138/400 (34%), Positives = 226/400 (56%), Gaps = 22/400 (5%)
Query: 3 KSPLLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRD 62
+SPL DAF KT ED R++T +GGLIT+ +I + +++ EW + ++ +++V+
Sbjct: 4 RSPLRRFDAFQKTVEDARIKTASGGLITLVSGLIVIFIVLMEWINYRRVIAVHEIIVNPS 63
Query: 63 RHLKLDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGFTKIRISPEGKELSKEKFQV 122
++++N ++TFP +PC +L +D+LD SGEFQ ++ + +K R+SP G+ +S + +
Sbjct: 64 HGDRMEINFNITFPRIPCQILTVDVLDVSGEFQRDIHHT-VSKTRLSPSGEIISVDDLDI 122
Query: 123 GDKSSKQSFNEEG--YCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFKDG 180
G ++QS +++G CG CYGA D + P+D CC TCD VR AYG+ W D
Sbjct: 123 G---NQQSISDDGAAECGDCYGAADFA-----PEDTPGCCNTCDAVRDAYGKAHWRIGDV 174
Query: 181 KGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYD 240
+QC+ E + E A+ EGC + G+ +NR+ G H PG S +N H HDT Y
Sbjct: 175 DAFKQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYI 234
Query: 241 AYPHL-NFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKII 299
L + +H I+ L+FG P D +PLD T + + YF K +
Sbjct: 235 NELDLHDMSHSIHHLSFG-PPLDASVHY-----SNPLDG--TVKKVSTADYRYEYFIKCV 286
Query: 300 PTRFEFLDGK--KVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKV 357
+F L ++T +++ T H+R +RGGR+E P V+ GG+PGV+F F++SP++V
Sbjct: 287 SYQFMPLSKSTLPIDTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRV 346
Query: 358 INKEQHATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQK 397
I ++ ++ GFL N + +GG + + + +D+ Y QK
Sbjct: 347 IERQVRGNTFGGFLSNVLALLGGCVTLASFVDRGYYEVQK 386
>Hs7706278 [U] KOG2667 COPII vesicle protein
Length = 383
Score = 224 bits (571), Expect = 2e-58
Identities = 138/405 (34%), Positives = 209/405 (51%), Gaps = 43/405 (10%)
Query: 6 LLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRDRHL 65
L DA+ KT ED RV+T G +T+ ++ +LL +SE + + T P+L VD+ R
Sbjct: 7 LKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRGD 66
Query: 66 KLDLNLDVTFPSMPCNVLNLDILDDSGEFQINL--------LDSGFTKIRISPEGKELSK 117
KL +N+DV FP MPC L++D +D +GE Q+++ LD + E EL K
Sbjct: 67 KLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAERHELGK 126
Query: 118 EKFQVGDKSSKQSFNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAF 177
+ V D S + C CYGA +D K CC TC+DVR AY ++GWAF
Sbjct: 127 VEVTVFDPDSL----DPDRCESCYGAE--------AEDIK-CCNTCEDVREAYRRRGWAF 173
Query: 178 KDGKGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTS 237
K+ +EQC REG+ + + + +EGC+V G ++N++ G HF PG S + H HD
Sbjct: 174 KNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233
Query: 238 LYDAYPHLNFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCK 297
+ ++N H I L+FGE ++PLD V + + F YF K
Sbjct: 234 SF-GLDNINMTHYIQHLSFGED---------YPGIVNPLDHTNVTAPQASMM--FQYFVK 281
Query: 298 IIPTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKV 357
++PT + +DG+ + T QFS T H++ G + G+PGVF +E+SP+ V
Sbjct: 282 VVPTVYMKVDGEVLRTNQFSVTRHEKVANG---------LLGDQGLPGVFVLYELSPMMV 332
Query: 358 INKEQHATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQKSIWGK 402
E+H S++ FL IGG+ V +ID + Y + ++I K
Sbjct: 333 KLTEKH-RSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKK 376
>CE12012 [U] KOG2667 COPII vesicle protein
Length = 380
Score = 207 bits (526), Expect = 3e-53
Identities = 127/398 (31%), Positives = 208/398 (51%), Gaps = 42/398 (10%)
Query: 6 LLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRDRH- 64
L DA+ K +D RV+T +GGL+T+ I +LL+V E KQF + L VD
Sbjct: 7 LKHFDAYRKPMDDFRVKTLSGGLVTLIATIAIVLLIVLETKQFLSTEVLEHLFVDSTTSD 66
Query: 65 LKLDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGFTKIRISPEGKELSKEKFQVGD 124
++ + D+TF +PCN + +D++D S E Q N+ D + ++R+ PEG+ +S+ ++
Sbjct: 67 ERVHIEFDITFTKLPCNFITVDVMDVSSEAQENINDDIY-RLRLDPEGRNISESAQKIEI 125
Query: 125 KSSKQSFN-----EEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFKD 179
+K S +E CG CYGA +CC TCDDV++AY KGW
Sbjct: 126 NQNKTSVETTDVIQEVKCGSCYGAAADG----------ICCNTCDDVKSAYAVKGWQVNI 175
Query: 180 GKGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLY 239
+ VEQC+ + +V+ N +EGCRV G ++ ++ G H PG + +R H HD
Sbjct: 176 EE-VEQCKNDKWVKEFNEHKNEGCRVYGTVKVAKVAGNFHLAPGDPHQAMRSHVHDLHNL 234
Query: 240 DAYPHLNFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKII 299
D + +H +N ++FG K G + PLD + +R ++ Y+ K++
Sbjct: 235 DPV-KFDASHTVNHVSFG-KSFPGKN--------YPLDGKVNTDNRGGIMYQ--YYVKVV 282
Query: 300 PTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVIN 359
PTR+++LDG+ ++ QFS T H + L G R + G+PG F +E SPL ++
Sbjct: 283 PTRYDYLDGRVDQSHQFSVTTHKKDL-GFR----------QSGLPGFFLQYEFSPL-MVQ 330
Query: 360 KEQHATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQK 397
E+ S++ FL++ +GGV A+ ++D Y + +
Sbjct: 331 YEEFRQSFASFLVSLCAIVGGVFAMAQLVDITIYHSSR 368
>At1g36050 [U] KOG2667 COPII vesicle protein
Length = 416
Score = 201 bits (511), Expect = 2e-51
Identities = 128/423 (30%), Positives = 206/423 (48%), Gaps = 53/423 (12%)
Query: 6 LLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDR---D 62
L ++DA+ K ED RT +GG+IT+ ++ LL SE + + + D R
Sbjct: 8 LRNLDAYPKINEDFYSRTLSGGVITLLSSVVMFLLFFSELRTSLSSYSHRDEAYSRYFKG 67
Query: 63 RHLKLDLNLDVTFPSMPCNVLNLDILDDSGEFQINL--------LDSGFTKIRISPEGKE 114
R + N D+TFP++ C++L++D +D SGE +++ LDS I +G
Sbjct: 68 RDVTHQRNFDITFPALACSILSVDAMDISGELHLDVKHDIIKRRLDSNGNTIEARQDGIG 127
Query: 115 LSKEKFQVGDKSSKQSFNEEGYCGPCYGA---------------LDQSKNDEL---PQDQ 156
+K + + + NE YCG CYGA + Q ++ Q++
Sbjct: 128 ATKIENPLQKHGGRLGHNET-YCGSCYGAEAVIVLSLYLTLWSMVSQLSSEVCFFPVQEE 186
Query: 157 KVCCQTCDDVRAAYGQKGWAFKDGKGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQG 216
CC +C+DVR AY +KGW + ++QC+REG+++ + EGC + G ++N++ G
Sbjct: 187 HDCCNSCEDVREAYRKKGWGVTNPDLIDQCKREGFLQRVKDEEGEGCNIYGFLEVNKVAG 246
Query: 217 TIHFGPGSSMRNIRGHFHDTSLYDAYPHLNFNHIINTLTFGEKPKDGDSELIGSASISPL 276
HF PG S H HD + N +H IN LT+G+ ++PL
Sbjct: 247 NFHFAPGKSFHQSGVHVHDLLAFQK-DSFNISHKINRLTYGD---------YFPGVVNPL 296
Query: 277 DSRQVFPDRDTHFHEFSYFCKIIPTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNT 336
D +V +DT + YF K++PT + + G +++ QFS T H + G+ +
Sbjct: 297 D--KVEWSQDTPNAMYQYFIKVVPTVYTDIRGHTIQSNQFSVTEHVKSSEAGQLQ----- 349
Query: 337 VHSKGGVPGVFFNFEMSPLKVINKEQHATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQ 396
+PGVFF +++SP+KV E+H S+ FL N +GGV V +ID Y Q
Sbjct: 350 -----SLPGVFFFYDLSPIKVTFTEEH-ISFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQ 403
Query: 397 KSI 399
K+I
Sbjct: 404 KAI 406
>At1g22200 [U] KOG2667 COPII vesicle protein
Length = 383
Score = 192 bits (488), Expect = 7e-49
Identities = 126/408 (30%), Positives = 203/408 (48%), Gaps = 56/408 (13%)
Query: 6 LLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRDRHL 65
L ++DA+ K ED RT +GG+IT++ I+ ++L SE + + VT L VD R
Sbjct: 8 LRNLDAYPKINEDFYRRTLSGGVITLASSIVMLILFFSELQLYIHPVTETQLRVDTSRGE 67
Query: 66 KLDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGFTKIRISPEGKELSKEKFQVGDK 125
KL +N DVTFP++ C++++LD +D SGE +++ K R+ G + ++ +G
Sbjct: 68 KLRINFDVTFPALQCSIISLDSMDISGERHLDVRHD-IIKRRLDSSGNVIEAKQDGIGHT 126
Query: 126 SSKQSFNEEG--------YCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAF 177
++ + G YCG C+GA ++ +D CC +C++VR AY +KGWA
Sbjct: 127 KIEKPLQKHGGRLEHNETYCGSCFGA--EASDD-------ACCNSCEEVREAYRKKGWAL 177
Query: 178 KDGKGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTS 237
D + ++Q + E EGC V G ++N++ G HF PG S FHD
Sbjct: 178 SDPESIDQVKDEE---------GEGCNVHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDML 228
Query: 238 LYDAYPHLNFNHIINTLTFGE------KPKDGDSELIGSASISPLDSRQVFPDRDTHFHE 291
L+ + N +H +N L FG+ P DG ASI+ SR D F
Sbjct: 229 LFQ-QGNYNISHKVNRLAFGDFFPGVVNPLDGGIRGNRVASIN-TSSRM---DCGVEF-- 281
Query: 292 FSYFCKIIPTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFE 351
+++P+ + + +++ QFS T H + + GR + PGVFF ++
Sbjct: 282 -----QVVPSIYTDVHQNTIQSNQFSVTEHFQNMEAGRMQ----------SPPGVFFYYD 326
Query: 352 MSPLKVINKEQHATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQKSI 399
+SP+KVI +EQH + FL N +GG+ V ++D Y Q++I
Sbjct: 327 LSPIKVIFEEQH-VEFLHFLTNVCAIVGGIFTVSGIVDSFIYHGQRAI 373
>7294304 [U] KOG2667 COPII vesicle protein
Length = 373
Score = 184 bits (468), Expect = 2e-46
Identities = 128/399 (32%), Positives = 198/399 (49%), Gaps = 41/399 (10%)
Query: 6 LLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRDRHL 65
L +DA+ +T +D VRT G +T+ I LL+ E + +L VD R
Sbjct: 7 LRRLDAYPRTLDDFSVRTVGGAAVTIISTSIISLLIFLEVLNYMQPTLNEELFVDTTRDH 66
Query: 66 KLDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGFTKIRISPEGKELSKEKFQVGDK 125
KL +NLDVT ++ CN ++LD +D SG+ + +D K R+ G+ L ++ + +
Sbjct: 67 KLRINLDVTLHNLACNYISLDAMDSSGDTHLR-VDHDVFKHRLDLNGEPL--KETPIKEI 123
Query: 126 SSKQSFNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFKDGKGVEQ 185
+ N+ CG CYGA + + CC TC+DV AY + W K +EQ
Sbjct: 124 VAVSPPNKNVTCGSCYGAEHNATH---------CCNTCEDVLDAYRLRKWTVAVDK-IEQ 173
Query: 186 CEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYDAYPHL 245
C+ + Y S EGCR+QG ++NR+ G+ HF PG S + H HD + ++
Sbjct: 174 CKGK-YKRSDEDAFKEGCRIQGHLEVNRMAGSFHFAPGKSFSIRQFHIHDFQ----FSNV 228
Query: 246 NFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKIIPTRF-- 303
+H IN L+FGEK I A PLD +V +T F+Y+ KI+PT +
Sbjct: 229 KLSHTINHLSFGEK--------IEFAKTHPLDGLRV-DVAETKSEMFNYYLKIVPTLYMR 279
Query: 304 EFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVINKEQH 363
DG+ + T QFS T + + L + G+PG+FF++E+SPL V E+H
Sbjct: 280 GNSDGEPIYTNQFSVTRYRKDLS-----------DRERGMPGIFFSYELSPLMVKYAERH 328
Query: 364 ATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQKSIWGK 402
+S+ F NC + IGGV V ++ + + ++I K
Sbjct: 329 -SSFGHFATNCCSIIGGVFTVAGILAVLLNNSWEAIQRK 366
>Hs20553406 [U] KOG2667 COPII vesicle protein
Length = 377
Score = 92.4 bits (228), Expect = 1e-18
Identities = 94/378 (24%), Positives = 152/378 (39%), Gaps = 69/378 (18%)
Query: 9 IDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRDRHLKLD 68
+DAF K E + +GG +++ LL + E+ + + + VD+D KL
Sbjct: 16 LDAFPKVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSSKLR 75
Query: 69 LNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGF---TKIRISPEGKELSKEKFQVGDK 125
+N+D+T +M C + D+LD E + D T +SP+ KE +
Sbjct: 76 INIDITV-AMKCQYVGADVLD-LAETMVASADGLVYEPTVFDLSPQQKEWQRML------ 127
Query: 126 SSKQSFNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFKDGKGVEQ 185
L QS+ E Q V ++ AFK
Sbjct: 128 -----------------QLIQSRLQEEHSLQDVIFKS-------------AFKSTSTALP 157
Query: 186 CEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYDAYPHL 245
+ +S NA CR+ G +N++ G H G ++ + RGH H +L + +
Sbjct: 158 PREDDSSQSPNA-----CRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVN-HESY 211
Query: 246 NFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKIIPTRFEF 305
NF+H I+ L+FGE + A I+PLD + H F YF ++PT+
Sbjct: 212 NFSHRIDHLSFGE---------LVPAIINPLDGTEKI--AIDHNQMFQYFITVVPTKLHT 260
Query: 306 LDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVINKEQHAT 365
+T QFS T +R + N GV G+F +++S L V E+H
Sbjct: 261 YK-ISADTHQFSVTERERII---------NHAAGSHGVSGIFMKYDLSSLMVTVTEEHMP 310
Query: 366 SWSGFLLNCITSIGGVLA 383
W F+ C +GG+ +
Sbjct: 311 FWQFFVRLC-GIVGGIFS 327
>Hs7706105 [U] KOG2667 COPII vesicle protein
Length = 378
Score = 89.7 bits (221), Expect = 7e-18
Identities = 93/378 (24%), Positives = 149/378 (38%), Gaps = 68/378 (17%)
Query: 9 IDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRDRHLKLD 68
+DAF K E + +GG +++ LL + E+ + + + VD+D KL
Sbjct: 16 LDAFPKVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSSKLR 75
Query: 69 LNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGF---TKIRISPEGKELSKEKFQVGDK 125
+N+D+T +M C + D+LD E + D T +SP+ KE +
Sbjct: 76 INIDITV-AMKCQYVGADVLD-LAETMVASADGLVYEPTVFDLSPQQKEWQRML------ 127
Query: 126 SSKQSFNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFKDGKGVEQ 185
L QS+ E Q V ++ AFK
Sbjct: 128 -----------------QLIQSRLQEEHSLQDVIFKS-------------AFKSTSTALP 157
Query: 186 CEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYDAYPHL 245
+ +S NA CR+ G +N++ G H G ++ + RGH H S +
Sbjct: 158 PREDDSSQSPNA-----CRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLGSTCQPWNLT 212
Query: 246 NFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKIIPTRFEF 305
F+H I+ L+FGE + A I+PLD + H F YF ++PT+
Sbjct: 213 IFSHRIDHLSFGE---------LVPAIINPLDGTEKI--AIDHNQMFQYFITVVPTKLHT 261
Query: 306 LDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVINKEQHAT 365
+T QFS T +R + N GV G+F +++S L V E+H
Sbjct: 262 YK-ISADTHQFSVTERERII---------NHAAGSHGVSGIFMKYDLSSLMVTVTEEHMP 311
Query: 366 SWSGFLLNCITSIGGVLA 383
W F+ C +GG+ +
Sbjct: 312 FWQFFVRLC-GIVGGIFS 328
>At3g22290 [U] KOG2667 COPII vesicle protein
Length = 290
Score = 84.0 bits (206), Expect = 4e-16
Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 73/353 (20%)
Query: 59 VDRDRHLKLDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGFTKIRISPEGKELSKE 118
VD R L +++++TFPS+PC+VL++D +D SG+ +++L D+ K+R++ G + E
Sbjct: 3 VDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDL-DTNIWKLRLNSHGHIIGTE 61
Query: 119 KFQVGDKSSKQSFNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFK 178
+ D K G + ++ KN+ T + G A
Sbjct: 62 --YISDLVEK---------GHEHDGKEEHKNE-----------TETEALNILGFDQAAET 99
Query: 179 DGKGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSL 238
K V+Q +G EGCRV G + R+ G H H ++
Sbjct: 100 MIKKVKQALADG----------EGCRVYGVLDVQRVAGNFHIS-----------VHGLNI 138
Query: 239 YDAY------PHLNFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEF 292
Y A ++N +H+I+ L+FG K + L D+ ++ D F
Sbjct: 139 YVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPLD--------DTNRILHDTSG---TF 187
Query: 293 SYFCKIIPTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEM 352
Y+ KI+PT + +L + T Q+S T + P+ P V+F +++
Sbjct: 188 KYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTPM-----------TEFDRTWPAVYFLYDL 236
Query: 353 SPLKVINKEQHATSWSGFLLNCITSIGGVLAVGTVIDKITYRAQKSIWGKKSS 405
SP+ V KE+ S+ + +GG A+ ++D+ +R +S K S+
Sbjct: 237 SPITVTIKEER-RSFLHLITRLCAVLGGTFALTGMLDRWMFRFIESFNKKPST 288
>YML067c [U] KOG2667 COPII vesicle protein
Length = 352
Score = 62.8 bits (151), Expect = 9e-10
Identities = 75/358 (20%), Positives = 142/358 (38%), Gaps = 75/358 (20%)
Query: 6 LLSIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRDRHL 65
L + DAF KTEE + ++ GGL ++ + + + +E+ ++ VVD
Sbjct: 4 LKTFDAFPKTEEQYKKKSTKGGLTSLLTYLFLLFIAWTEFGEYFGGYIDQQYVVDSQVRD 63
Query: 66 KLDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDSGFTKIRISPEGKELSKEKFQVGDK 125
+ +N+D+ + + C+ L +++ D + + ++ L E +L + F +
Sbjct: 64 TVQINMDI-YVNTKCDWLQINVRDQTMDRKLVL------------EELQLEEMPFFIPYD 110
Query: 126 SSKQSFNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFKDGKGVEQ 185
+ NE LD+ + +P + + T +F D E
Sbjct: 111 TKVNDINEI-----ITPELDEILGEAIPAEFREKLDTR------------SFFD----ES 149
Query: 186 CEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYDAYPHL 245
+ ++ N GC V G +NR+ G + + + S L
Sbjct: 150 DPNKAHLPEFN-----GCHVFGSIPVNRVSGELQI-------TAKSLGYVASRKAPLEEL 197
Query: 246 NFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKIIPTRFEF 305
FNH+IN +FG+ D +PLD+ F ++D + Y+ ++PT F+
Sbjct: 198 KFNHVINEFSFGDFYPYID---------NPLDNTAQF-NQDEPLTTYVYYTSVVPTLFKK 247
Query: 306 LDGKKVETTQFSAT-----YHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVI 358
L G +V+T Q+S Y D +G + +PG+FF + PL ++
Sbjct: 248 L-GAEVDTNQYSVNDYRYLYKDVAAKGDK-------------MPGIFFKYNFEPLSIV 291
>SPBC2G5.04c [U] KOG2667 COPII vesicle protein
Length = 333
Score = 58.2 bits (139), Expect = 2e-08
Identities = 57/225 (25%), Positives = 97/225 (42%), Gaps = 44/225 (19%)
Query: 182 GVEQCEREGYVESINARIHEG--CRVQGRAQLNRIQGTIHF-GPGSSMRNIRGHFHDTSL 238
G+ E + + NA G CR+ G+ +NR+ G +H PG FH
Sbjct: 129 GLRWARTEKFRKKNNAEPGSGTACRIYGQLVVNRVNGQLHITAPGWGYGRSNIPFHS--- 185
Query: 239 YDAYPHLNFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKI 298
LNF H I L+FGE A ++ LD + + H F Y+ +
Sbjct: 186 ------LNFTHYIEELSFGE---------YYPALVNALDGH--YGHANDHPFAFQYYLSV 228
Query: 299 IPTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGV----PGVFFNFEMSP 354
+PT ++ + ET Q+S T N+V + G PG+F ++++ P
Sbjct: 229 LPTSYKS-SFRSFETNQYSLT--------------ENSVVRQLGFGSLPPGIFIDYDLEP 273
Query: 355 LKVINKEQHATSWSGFLLNCITSIGGVLAVGTVIDKI-TYRAQKS 398
L V ++H + + LL + GG++ V + I+++ + RA +S
Sbjct: 274 LAVRVVDKH-PNVASTLLRILAISGGLITVASWIERVYSSRAHRS 317
>CE27226 [U] KOG2667 COPII vesicle protein
Length = 286
Score = 57.8 bits (138), Expect = 3e-08
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 42/194 (21%)
Query: 202 GCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYDAYPHLNFNHIINTLTFGEKPK 261
GCR + R ++N++ G H S+ + + H+I+++ FG
Sbjct: 110 GCRFESRFEINKVPGNFHLSTHSAATQPESY-------------DMRHLIHSIKFG---- 152
Query: 262 DGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCKIIPTRFEFLDGKKVETTQFS---- 317
D S S PL R + + HE Y KI+P+ E G + + Q++
Sbjct: 153 DDVSHKNLKGSFDPLAKRNTSQENGLNTHE--YILKIVPSVHEDYSGTILNSYQYTFGHK 210
Query: 318 --ATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVINKEQHATSWSGFLLNCI 375
TYH HS +P V+F +E+ P+ + EQ S+ FL +
Sbjct: 211 SYITYH----------------HSGKIIPAVWFKYELQPITLKQTEQR-QSFYAFLTSIC 253
Query: 376 TSIGGVLAVGTVID 389
+GG V +ID
Sbjct: 254 AVVGGTFTVAGIID 267
Score = 52.8 bits (125), Expect = 9e-07
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 DAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVDRD-RHLKLD 68
D + K +D+ T G +I++ C++ ++ ++ + I R + +D R K+D
Sbjct: 8 DIYRKVPKDLTQPTTVGAVISILCVLFISFMIFNDILAYIFIDLRSEFFIDDPGREGKID 67
Query: 69 LNLDVTFPSMPCNVLNLDILDDSGEFQINLLD 100
+ ++V+FP M C L +DI D++G ++ +D
Sbjct: 68 VQVNVSFPHMACEYLGVDIQDENGRHEVGFVD 99
>Hs17435487 [U] KOG2667 COPII vesicle protein
Length = 290
Score = 57.4 bits (137), Expect = 4e-08
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 10 DAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSEWKQFSTIVTRPDLVVD---RDRHLK 66
D + K +D+ T TG +I++ C + + L +SE F T +L VD +D K
Sbjct: 9 DIYRKVPKDLTQPTYTGAIISICCCLFILFLFLSELTGFITTEVVNELYVDDPDKDSGGK 68
Query: 67 LDLNLDVTFPSMPCNVLNLDILDDSGEFQINLLDS 101
+D++L+++ P++ C ++ LDI D+ G ++ +D+
Sbjct: 69 IDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDN 103
Score = 50.8 bits (120), Expect = 4e-06
Identities = 45/208 (21%), Positives = 86/208 (40%), Gaps = 45/208 (21%)
Query: 202 GCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYDAYPHLNFNHIINTLTFGEKPK 261
GCR +G+ +N++ G H H + P + H+I+ L+FG+ +
Sbjct: 114 GCRFEGQFSINKVPGNFHVST-----------HSATAQPQNP--DMTHVIHKLSFGDTLQ 160
Query: 262 ----DGDSELIGSA---SISPLDSRQVFPDRDTHFHEFSYFCKIIPTRFEFLDGKKVETT 314
G +G A + +PL S Y KI+PT +E GK+ +
Sbjct: 161 VQNIHGAFNALGGADRLTSNPLASH-------------DYILKIVPTVYEDKSGKQRYSY 207
Query: 315 QFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVINKEQHATSWSGFLLNC 374
Q++ ++++ H+ +P ++F +++SP+ V E+ + F+
Sbjct: 208 QYTVA----------NKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYR-FITTI 256
Query: 375 ITSIGGVLAVGTVIDKITYRAQKSIWGK 402
IGG V ++D + A ++ W K
Sbjct: 257 CAIIGGTFTVAGILDSCIFTASEA-WKK 283
>At4g27080 [U] KOG2667 COPII vesicle protein
Length = 480
Score = 55.1 bits (131), Expect = 2e-07
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 202 GCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSLYDAYPHLNFNHIINTLTFGEK-- 259
GCRV+G ++ ++ G + S H D+S +N +H++N L+FG +
Sbjct: 293 GCRVEGYMRVKKVPGNLMVSARSG-----SHSFDSS------QMNMSHVVNHLSFGRRIM 341
Query: 260 -PKDGDSELIG---SASISPLDSRQVFPDRDTHFH-EFSYFCKIIPTRFEFLDGKK-VET 313
K + + + S LD R RD + ++ +I+ T +G+ VE
Sbjct: 342 PQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEHYLQIVKTEVVKSNGQALVEA 401
Query: 314 TQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKVINKEQHATSWSGFLLN 373
+++A H + HS +P F+FE+SP++V+ E ++ S+S F+ N
Sbjct: 402 YEYTA--------------HSSVAHSYY-LPVAKFHFELSPMQVLITE-NSKSFSHFITN 445
Query: 374 CITSIGGVLAVGTVIDKITYRA 395
IGGV V ++D I + +
Sbjct: 446 VCAIIGGVFTVAGILDSILHHS 467
>7290051 [U] KOG2667 COPII vesicle protein
Length = 441
Score = 55.1 bits (131), Expect = 2e-07
Identities = 77/396 (19%), Positives = 158/396 (39%), Gaps = 62/396 (15%)
Query: 8 SIDAFGKTEEDVRVRTRTGGLITVSCIIITMLLLVSE----WKQFSTIVT-RPDLVVDRD 62
++DAF K E + GG +++ ++ + L+ +E W + + PD+ +D
Sbjct: 20 NLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALDEQ 79
Query: 63 RHLKLDLNLDVTFPSMPCNVLN-LDILDDSGE--FQINLLDSGFTKIRISPEGKELSKEK 119
+ +D+ + +MPC L+ +D++D++ + F L +S E L +
Sbjct: 80 VQMHVDITV-----AMPCASLSGVDLMDETQQDVFAYGTLQREGVWWEMS-EHDRLQFQA 133
Query: 120 FQVGDKSSKQSFNEEGYCGPCYGALDQSKNDELPQDQKVCCQTCDDVRAAYGQKGWAFK- 178
Q+ + ++ F+ ++ ++ +D ++ AA
Sbjct: 134 IQIQNHYLREEFH----------SVADVLFKDIMRDNHPARESASKAPAAPPPGALPLSV 183
Query: 179 DGKGVEQCEREGYVESINARIHEGCRVQGRAQLNRIQGTIHFGPGSSMRNIRGHFHDTSL 238
D G + E ++ CR+ G +N++ G +H G+ + + G F D +
Sbjct: 184 DLHGRHNVQPESKFDA--------CRLHGTLGINKVAGVLHLVGGA--QPVVGLFEDHWM 233
Query: 239 YDAYPH-LNFNHIINTLTFGEKPKDGDSELIGSASISPLDSRQVFPDRDTHFHEFSYFCK 297
+ NF H IN L+FG+ + PL+ ++ + YF K
Sbjct: 234 IELRRMPANFTHRINRLSFGQ---------YSGRIVQPLEGDEIVIHEEAT--TVQYFLK 282
Query: 298 IIPTRFEFLDGKKVETTQFSATYHDRPLRGGRDEDHPNTVHSKGGVPGVFFNFEMSPLKV 357
++PT + Q++ T + R L R+ G PG++F ++ S LK+
Sbjct: 283 VVPTEIH-QTFTTIYAFQYAVTENVRKLDSERNSY---------GSPGIYFKYDWSALKI 332
Query: 358 I--NKEQHATSWSGFLLNCITSIGGVLAVGTVIDKI 391
I N H + F + + I G++ + I+ +
Sbjct: 333 IVRNDRDHLVT---FAIRLCSIISGIIVISGAINAL 365
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.138 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,277,111
Number of Sequences: 60738
Number of extensions: 1187993
Number of successful extensions: 2491
Number of sequences better than 1.0e-05: 16
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2425
Number of HSP's gapped (non-prelim): 24
length of query: 405
length of database: 30,389,216
effective HSP length: 109
effective length of query: 296
effective length of database: 23,768,774
effective search space: 7035557104
effective search space used: 7035557104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)