ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII3192  suspect: LH   T     KOG3589  Signal transduction mechanisms                                 G protein signaling regulators

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII3192 1124930 1123920 -337 
         (337 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YOR107w [T] KOG3589 G protein signaling regulators                     73   5e-13

>YOR107w [T] KOG3589 G protein signaling regulators
          Length = 309

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 17/152 (11%)

Query: 16  HHDEILSG-----FHDFLAKPHCDENLWFIKATNPFMNPNSKLSFTH------WN-DVYR 63
           HH+ + S      F+ FL + HC+ENL F +  + F+      S +       WN  +Y 
Sbjct: 38  HHERMRSPYTIQKFYKFLKRAHCEENLEFFEKAHQFLQLKQNRSISEEKLLEVWNKSLYI 97

Query: 64  RFIQEDAPKECNFPESIRICFDEAFRKHGLPTHETIEQARLHIVNLLQDAYSKFQRNSDI 123
           ++I  D+PKECNF +  R  F++ F  + +P    +  A  H++ LL D Y +F  +   
Sbjct: 98  KYIAVDSPKECNFSQDTREIFEKCFANNEVPADVDVLCAISHVMGLLMDGYHRFVSS--- 154

Query: 124 PDNIKYTDCYCHKDGTLYHHSDTDKDQNTSHS 155
            +  KY+  Y H D       D   +  TS S
Sbjct: 155 VNEKKYSATYAHNDSAT--EQDLKNESTTSFS 184


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.320    0.136    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,227,064
Number of Sequences: 60738
Number of extensions: 539055
Number of successful extensions: 1179
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1178
Number of HSP's gapped (non-prelim): 1
length of query: 337
length of database: 30,389,216
effective HSP length: 107
effective length of query: 230
effective length of database: 23,890,250
effective search space: 5494757500
effective search space used: 5494757500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)