ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3276.1 good J KOG3320 Translation, ribosomal structure and biogenesis 40S ribosomal protein S7
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3276.1 1154126 1153728 -133
(133 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR096w [J] KOG3320 40S ribosomal protein S7 243 5e-65
YNL096c [J] KOG3320 40S ribosomal protein S7 234 2e-62
SPAC18G6.14c [J] KOG3320 40S ribosomal protein S7 176 6e-45
Hs4506741 [J] KOG3320 40S ribosomal protein S7 161 2e-40
Hs20548388 [J] KOG3320 40S ribosomal protein S7 157 3e-39
7301916 [J] KOG3320 40S ribosomal protein S7 147 4e-36
Hs16159701 [J] KOG3320 40S ribosomal protein S7 144 3e-35
Hs17448990 [J] KOG3320 40S ribosomal protein S7 143 7e-35
CE06577 [J] KOG3320 40S ribosomal protein S7 140 5e-34
At1g48830 [J] KOG3320 40S ribosomal protein S7 130 5e-31
At5g16130 [J] KOG3320 40S ribosomal protein S7 127 5e-30
At3g02560 [J] KOG3320 40S ribosomal protein S7 125 1e-29
Hs17452042 [J] KOG3320 40S ribosomal protein S7 114 4e-26
Hs17486905 [J] KOG3320 40S ribosomal protein S7 108 1e-24
Hs22046078_2 [J] KOG3320 40S ribosomal protein S7 103 5e-23
Hs22064430 [J] KOG3320 40S ribosomal protein S7 95 3e-20
Hs22052293 [J] KOG3320 40S ribosomal protein S7 67 8e-12
Hs4503533 [R] KOG0118 FOG: RRM domain 31 0.51
Hs22057414 [R] KOG0118 FOG: RRM domain 30 0.67
Hs20547767 [J] KOG3320 40S ribosomal protein S7 30 0.67
At5g18070 [G] KOG2537 Phosphoglucomutase/phosphomannomutase 30 1.1
Hs4505331 [U] KOG1585 Protein required for fusion of vesicles in... 28 2.6
7290261 [R] KOG0835 Cyclin L 28 2.6
YOL113w [T] KOG0578 p21-activated serine/threonine protein kinase 28 3.3
At1g23280 [A] KOG3064 RNA-binding nuclear protein (MAK16) contai... 28 3.3
Hs5174481 [B] KOG1343 Histone deacetylase complex catalytic comp... 27 5.7
At3g25020 [R] KOG0619 FOG: Leucine rich repeat 27 5.7
7300752 [R] KOG0354 DEAD-box like helicase 27 7.4
Hs8922436 [S] KOG0043 Uncharacterized conserved protein contains... 27 9.7
At5g03180 [A] KOG1609 Protein involved in mRNA turnover and stab... 27 9.7
At4g04880 [F] KOG1097 Adenine deaminase/adenosine deaminase 27 9.7
At2g07450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 27 9.7
>YOR096w [J] KOG3320 40S ribosomal protein S7
Length = 190
Score = 243 bits (620), Expect = 5e-65
Identities = 122/133 (91%), Positives = 127/133 (94%)
Query: 1 MAVFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
+A+FVPVPSLA +HKVQ KLTRELEKKFQDRHVIFLAERRILPKPSR SRQ QKRPRSRT
Sbjct: 58 LAIFVPVPSLAGFHKVQTKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRT 117
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQK+LL+SKDVQ ID KLESFQAVYNKLT
Sbjct: 118 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLT 177
Query: 121 GKQIVFEIPSETH 133
GKQIVFEIPSETH
Sbjct: 178 GKQIVFEIPSETH 190
>YNL096c [J] KOG3320 40S ribosomal protein S7
Length = 190
Score = 234 bits (597), Expect = 2e-62
Identities = 116/133 (87%), Positives = 126/133 (94%)
Query: 1 MAVFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
+ +FVPVP+L+AYHKVQ KLTRELEKKF DRHVIFLAERRILPKPSR SRQ QKRPRSRT
Sbjct: 58 LVLFVPVPALSAYHKVQTKLTRELEKKFPDRHVIFLAERRILPKPSRTSRQVQKRPRSRT 117
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVHDK+LED+VFPTEIVGKRVRYLVGGNKIQK+LL+SKDVQ ID KLESFQAVYNKLT
Sbjct: 118 LTAVHDKVLEDMVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLT 177
Query: 121 GKQIVFEIPSETH 133
GKQIVFEIPS+T+
Sbjct: 178 GKQIVFEIPSQTN 190
>SPAC18G6.14c [J] KOG3320 40S ribosomal protein S7
Length = 195
Score = 176 bits (447), Expect = 6e-45
Identities = 86/132 (65%), Positives = 102/132 (77%)
Query: 1 MAVFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
+ VFVP P L A+HK Q +LTRELEKKF DRHVIF+A+RRILPKP RKSR TQKRPRSRT
Sbjct: 60 IVVFVPQPLLKAFHKCQARLTRELEKKFADRHVIFIAQRRILPKPGRKSRVTQKRPRSRT 119
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVH+ ILED+VFPTEI+GKR R G K K+ L+++D +D KL SF +VY+KLT
Sbjct: 120 LTAVHNAILEDIVFPTEIIGKRTRQATDGRKTIKVFLDNRDANTVDYKLGSFSSVYHKLT 179
Query: 121 GKQIVFEIPSET 132
GK + FE P T
Sbjct: 180 GKNVTFEFPVAT 191
>Hs4506741 [J] KOG3320 40S ribosomal protein S7
Length = 194
Score = 161 bits (408), Expect = 2e-40
Identities = 76/129 (58%), Positives = 102/129 (78%), Gaps = 2/129 (1%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSR--QTQKRPRSRT 60
+FVPVP L ++ K+Q++L RELEKKF +HV+F+A+RRILPKP+RKSR QKRPRSRT
Sbjct: 62 IFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRT 121
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVHD ILEDLVFP+EIVGKR+R + G+++ K+ L+ ++++K+E+F VY KLT
Sbjct: 122 LTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLT 181
Query: 121 GKQIVFEIP 129
GK + FE P
Sbjct: 182 GKDVNFEFP 190
>Hs20548388 [J] KOG3320 40S ribosomal protein S7
Length = 194
Score = 157 bits (398), Expect = 3e-39
Identities = 73/129 (56%), Positives = 100/129 (76%), Gaps = 2/129 (1%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSR--QTQKRPRSRT 60
+FVP+P L ++ K+Q++L RELEKKF +HV+F+ +RRILPKP+RKSR QKRPRS T
Sbjct: 62 IFVPIPQLKSFQKIQVRLVRELEKKFSGKHVVFIVQRRILPKPTRKSRTKNKQKRPRSHT 121
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVHD ILEDLVFP+EIVGKR+R + G+++ K+ L+ ++++K+E+F VY KLT
Sbjct: 122 LTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLT 181
Query: 121 GKQIVFEIP 129
GK + FE P
Sbjct: 182 GKDVNFEFP 190
>7301916 [J] KOG3320 40S ribosomal protein S7
Length = 194
Score = 147 bits (371), Expect = 4e-36
Identities = 70/129 (54%), Positives = 97/129 (74%), Gaps = 2/129 (1%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQT--QKRPRSRT 60
++VP+P + K+QI L RELEKKF +HV+ +AER+ILPKP+RK+R QKRPRSRT
Sbjct: 60 IYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRT 119
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAV+D ILEDLVFP EIVGKR+R + G+++ K+ L+ I++K+++F +VY KLT
Sbjct: 120 LTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLT 179
Query: 121 GKQIVFEIP 129
G+ + FE P
Sbjct: 180 GRDVTFEFP 188
>Hs16159701 [J] KOG3320 40S ribosomal protein S7
Length = 194
Score = 144 bits (363), Expect = 3e-35
Identities = 68/129 (52%), Positives = 96/129 (73%), Gaps = 2/129 (1%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKS--RQTQKRPRSRT 60
+FVPVP L ++ K+Q++L ELEKKF +HV+F+A+RRILPKP+ KS + QK PRS T
Sbjct: 62 IFVPVPQLKSFQKIQVRLVCELEKKFSGKHVVFIAQRRILPKPTWKSCTKYKQKHPRSHT 121
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVHD ILEDLVF ++IVGKR+R + G+++ K+ L+ ++++K+E+F VY KL
Sbjct: 122 LTAVHDAILEDLVFTSKIVGKRIRVKLDGSRLMKVHLDKAQQNNVEHKVETFSGVYKKLM 181
Query: 121 GKQIVFEIP 129
GK + FE P
Sbjct: 182 GKDVNFEFP 190
>Hs17448990 [J] KOG3320 40S ribosomal protein S7
Length = 194
Score = 143 bits (360), Expect = 7e-35
Identities = 68/129 (52%), Positives = 96/129 (73%), Gaps = 2/129 (1%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKS--RQTQKRPRSRT 60
+ VPV L ++ K+QI+L ELEKKF +HV+F+A+RRILPKP+RKS + QKRPRS T
Sbjct: 62 ILVPVTQLKSFQKIQIRLVSELEKKFSGKHVVFIAQRRILPKPTRKSCTKNKQKRPRSST 121
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
+TAVHD ILEDLVFP+EIVGK++R + G+++ K+ L+ ++++K+E+F VY KL
Sbjct: 122 VTAVHDAILEDLVFPSEIVGKKIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLM 181
Query: 121 GKQIVFEIP 129
GK + E P
Sbjct: 182 GKDVNCEFP 190
>CE06577 [J] KOG3320 40S ribosomal protein S7
Length = 194
Score = 140 bits (353), Expect = 5e-34
Identities = 68/130 (52%), Positives = 92/130 (70%), Gaps = 3/130 (2%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSR---QTQKRPRSR 59
++VPVP L A+HK+ L RELEKKF R ++ LA+RRILPKP R S+ Q QKRPRSR
Sbjct: 61 IYVPVPQLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSR 120
Query: 60 TLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKL 119
TLTAVHD L++LV+P E+VG+R+R + G K+ K+ L+ ++ +K+ F +VY KL
Sbjct: 121 TLTAVHDAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKL 180
Query: 120 TGKQIVFEIP 129
TGK + FE P
Sbjct: 181 TGKDVTFEFP 190
>At1g48830 [J] KOG3320 40S ribosomal protein S7
Length = 191
Score = 130 bits (327), Expect = 5e-31
Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Query: 1 MAVFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
+ V VP AY K+ ++L RELEKKF + VI +A RRI+ P + S KRPR+RT
Sbjct: 61 IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGS--AAKRPRNRT 118
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LT+VH+ IL+D+V P EIVGKR RY + G KI K+ L+ K+ + + K+E+F AVY KLT
Sbjct: 119 LTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLT 178
Query: 121 GKQIVFEIP 129
GK +VFE P
Sbjct: 179 GKDVVFEFP 187
>At5g16130 [J] KOG3320 40S ribosomal protein S7
Length = 190
Score = 127 bits (318), Expect = 5e-30
Identities = 64/131 (48%), Positives = 90/131 (67%), Gaps = 2/131 (1%)
Query: 1 MAVFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
+ ++VP A+ K+ +L RELEKKF + VIF+ RRI+ +P +K Q RPR+RT
Sbjct: 61 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIM-RPPKKGAAVQ-RPRNRT 118
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LT+VH+ +LED+ FP EIVGKR RY + G+KI K+ L++K+ + + KLE+ VY KLT
Sbjct: 119 LTSVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLT 178
Query: 121 GKQIVFEIPSE 131
GK +VFE P E
Sbjct: 179 GKDVVFEYPVE 189
>At3g02560 [J] KOG3320 40S ribosomal protein S7
Length = 191
Score = 125 bits (315), Expect = 1e-29
Identities = 63/129 (48%), Positives = 87/129 (66%), Gaps = 2/129 (1%)
Query: 1 MAVFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
+ ++VP A+ K+ ++L RELEKKF + VIF+A RRI+ P + S +RPR+RT
Sbjct: 61 VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGS--AVQRPRNRT 118
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LT+VH+ +LED+ +P EIVGKR RY + G KI K+ L+SK + KLE+ VY KLT
Sbjct: 119 LTSVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLT 178
Query: 121 GKQIVFEIP 129
GK +VFE P
Sbjct: 179 GKDVVFEYP 187
>Hs17452042 [J] KOG3320 40S ribosomal protein S7
Length = 191
Score = 114 bits (285), Expect = 4e-26
Identities = 61/129 (47%), Positives = 81/129 (62%), Gaps = 20/129 (15%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKS--RQTQKRPRSRT 60
+FVPVP L ++ K+Q++L RRILPKP+RKS + QK PRSR
Sbjct: 77 IFVPVPKLKSFQKIQVQL------------------RRILPKPTRKSCMKNKQKHPRSRA 118
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVHD ILEDLVFP+EIVGKR+ + G + K+ L+ ++++K+E F VY KLT
Sbjct: 119 LTAVHDAILEDLVFPSEIVGKRICMKLDGGLLVKVHLDKAQQNNVEHKVEIFSGVYKKLT 178
Query: 121 GKQIVFEIP 129
GK + FE P
Sbjct: 179 GKDVNFEFP 187
>Hs17486905 [J] KOG3320 40S ribosomal protein S7
Length = 176
Score = 108 bits (271), Expect = 1e-24
Identities = 60/129 (46%), Positives = 79/129 (60%), Gaps = 20/129 (15%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKS--RQTQKRPRSRT 60
+FVPVP L ++ K Q++L RRILPKP++KS QK PRS T
Sbjct: 62 IFVPVPQLKSFQKTQVQL------------------RRILPKPTQKSCTNNKQKLPRSCT 103
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
LTAVHD ILEDLVFP+EIVGKR+ + G+ + KI L+ ++++K+E F VY KL
Sbjct: 104 LTAVHDAILEDLVFPSEIVGKRIHVKLDGSHLIKIHLDEAQQNNVEHKVEPFSGVYKKLM 163
Query: 121 GKQIVFEIP 129
GK + FE P
Sbjct: 164 GKDVNFEFP 172
>Hs22046078_2 [J] KOG3320 40S ribosomal protein S7
Length = 152
Score = 103 bits (258), Expect = 5e-23
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 20/129 (15%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKS--RQTQKRPRSRT 60
+FVP P L ++ K+Q+ L RRILPKP+RKS + QK PRSRT
Sbjct: 38 IFVPFPQLKSFQKIQVWL------------------RRILPKPTRKSCTKNKQKHPRSRT 79
Query: 61 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLT 120
L A+HD I EDLVFP+EIVGKR+ + G+++ K L+ +++ +E+F VY KLT
Sbjct: 80 LKAMHDSIPEDLVFPSEIVGKRIHVKLDGSRLIKAHLDKAQQNNVERNVETFSGVYMKLT 139
Query: 121 GKQIVFEIP 129
GK I E P
Sbjct: 140 GKDINVEFP 148
>Hs22064430 [J] KOG3320 40S ribosomal protein S7
Length = 152
Score = 94.7 bits (234), Expect = 3e-20
Identities = 47/106 (44%), Positives = 69/106 (64%), Gaps = 16/106 (15%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLT 62
+FVPVP L ++ K+Q++L RELEKKF +HV+F+A+RRILPKP+RKSR
Sbjct: 62 IFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKN--------- 112
Query: 63 AVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNK 108
EDLVFP+EIV KR+R + G+++ K L+ ++++K
Sbjct: 113 -------EDLVFPSEIVVKRIRVKLDGSRLIKAHLDKAQQNNVEHK 151
>Hs22052293 [J] KOG3320 40S ribosomal protein S7
Length = 174
Score = 66.6 bits (161), Expect = 8e-12
Identities = 38/127 (29%), Positives = 59/127 (45%), Gaps = 34/127 (26%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLT 62
+ VP+P L+++ K+Q+++ ELEKKF
Sbjct: 78 IIVPIPQLSSFQKIQVQIVHELEKKF---------------------------------- 103
Query: 63 AVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLTGK 122
A HD ILEDLV P+EI KR+ +++K+ + H+ +K+E+F VY L GK
Sbjct: 104 ATHDAILEDLVCPSEIGSKRICVKPASIQLRKVHRDKAQQNHVGHKVETFSGVYKDLLGK 163
Query: 123 QIVFEIP 129
+ E P
Sbjct: 164 GVNCEFP 170
>Hs4503533 [R] KOG0118 FOG: RRM domain
Length = 611
Score = 30.8 bits (68), Expect = 0.51
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 6 PVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
PV + A +V+ +L +E EK + + L R PS +S +TQ+R RSRT
Sbjct: 366 PVDTAAREREVEERLQKEQEKLQRQWNEPKLERRPRERHPSWRSEETQERERSRT 420
>Hs22057414 [R] KOG0118 FOG: RRM domain
Length = 565
Score = 30.4 bits (67), Expect = 0.67
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 6 PVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRT 60
PV + A +V+ +L +E EK + L R PS +S +TQ+R RSRT
Sbjct: 320 PVDTAAREREVEERLQKEQEKLQRQLDEPKLERRPRERHPSWRSEETQERERSRT 374
>Hs20547767 [J] KOG3320 40S ribosomal protein S7
Length = 106
Score = 30.4 bits (67), Expect = 0.67
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPR 57
+FVP+P L ++ K+Q+ L EL ++ + V FLA I S TQ RP+
Sbjct: 31 IFVPIPKLKSFQKIQVWLLHEL-RRSSNLPVTFLAVFLI-------SCHTQLRPQ 77
>At5g18070 [G] KOG2537 Phosphoglucomutase/phosphomannomutase
Length = 556
Score = 29.6 bits (65), Expect = 1.1
Identities = 13/44 (29%), Positives = 23/44 (51%)
Query: 89 GNKIQKILLNSKDVQHIDNKLESFQAVYNKLTGKQIVFEIPSET 132
G+ + +LL +QH+ +E + +Y L +QI E+P T
Sbjct: 439 GDALSGVLLVEVILQHLGWSIEKWNELYKDLPSRQIKVEVPDRT 482
>Hs4505331 [U] KOG1585 Protein required for fusion of vesicles in vesicular
transport gamma-SNAP
Length = 312
Score = 28.5 bits (62), Expect = 2.6
Identities = 13/49 (26%), Positives = 27/49 (54%)
Query: 77 EIVGKRVRYLVGGNKIQKILLNSKDVQHIDNKLESFQAVYNKLTGKQIV 125
E++GK R LV G + + L+ + ++I ++E++ Y K + +V
Sbjct: 155 ELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLV 203
>7290261 [R] KOG0835 Cyclin L
Length = 560
Score = 28.5 bits (62), Expect = 2.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 42 LPKPSRKSRQTQKRPRSRTLTAVHDK 67
LP PS KS Q R RSR+ T H +
Sbjct: 381 LPLPSEKSPQKDSRSRSRSRTRTHSR 406
>YOL113w [T] KOG0578 p21-activated serine/threonine protein kinase
Length = 655
Score = 28.1 bits (61), Expect = 3.3
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 11 AAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLTAVHDKILE 70
A Y +IKL +E + +F H + R+ K R S Q +K+ L ++D E
Sbjct: 373 AVYLSKRIKLPQENDPRFLKSHCHRVVGERVAIKQIRLSEQPKKQLIMNELLVMNDSRQE 432
Query: 71 DLV 73
++V
Sbjct: 433 NIV 435
>At1g23280 [A] KOG3064 RNA-binding nuclear protein (MAK16) containing a
distinct C4 Zn-finger
Length = 303
Score = 28.1 bits (61), Expect = 3.3
Identities = 17/73 (23%), Positives = 33/73 (44%), Gaps = 8/73 (10%)
Query: 14 HKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLTAVHDKILEDL- 72
HKV+ +LT+ + + + R + ++ P R+ ++ +R A DK +E
Sbjct: 106 HKVKQRLTKMTQMRIRMRKLALKTREVVVTTPRRQIKRESRREEKAIKAAQLDKAIETEL 165
Query: 73 -------VFPTEI 78
++PTEI
Sbjct: 166 MERLKKGIYPTEI 178
>Hs5174481 [B] KOG1343 Histone deacetylase complex catalytic component HDA1
Length = 1084
Score = 27.3 bits (59), Expect = 5.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 24 LEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLTAVHDKILEDLVFPTEIVGKRV 83
LEK Q L +I+PKPS +RQ + P + L D + + G++
Sbjct: 490 LEKHKQQFQQQQLQMNKIIPKPSEPARQPESHPEETEEELREHQALLDEPYLDRLPGQKE 549
Query: 84 RYLVGGNKIQKILLNSKD 101
+ G ++++ + S +
Sbjct: 550 AHAQAGVQVKQEPIESDE 567
>At3g25020 [R] KOG0619 FOG: Leucine rich repeat
Length = 890
Score = 27.3 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 101 DVQHIDNKLESFQAVYNKLTGK 122
D ++D L SF YN+LTGK
Sbjct: 546 DKYYVDTPLRSFDVGYNRLTGK 567
>7300752 [R] KOG0354 DEAD-box like helicase
Length = 1383
Score = 26.9 bits (58), Expect = 7.4
Identities = 12/49 (24%), Positives = 29/49 (58%)
Query: 7 VPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKR 55
V L+ Y + + + + K +++H+ +AE + PK + K+++++KR
Sbjct: 575 VVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKR 623
>Hs8922436 [S] KOG0043 Uncharacterized conserved protein contains DM10 domain
Length = 640
Score = 26.6 bits (57), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 39 RRILPKPSRKSRQTQKRPRSRTLTAVHDKILEDL 72
+R P P +S+QT+K P + L A+ D I + L
Sbjct: 537 KREAPAPEAESKQTEKDPGVQELEALIDTIQKQL 570
>At5g03180 [A] KOG1609 Protein involved in mRNA turnover and stability
Length = 464
Score = 26.6 bits (57), Expect = 9.7
Identities = 17/63 (26%), Positives = 32/63 (49%), Gaps = 1/63 (1%)
Query: 6 PVPSLAAYHKVQIKLTRELEKKF-QDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLTAV 64
PV S+ + I+ TR + F +D V + R++P PSR + + ++ L+ +
Sbjct: 172 PVTSMKGERLLPIRRTRSVPTFFNKDGSVKPSSVFRVIPTPSRGDEKRLEMTQASKLSKL 231
Query: 65 HDK 67
HD+
Sbjct: 232 HDE 234
>At4g04880 [F] KOG1097 Adenine deaminase/adenosine deaminase
Length = 415
Score = 26.6 bits (57), Expect = 9.7
Identities = 25/102 (24%), Positives = 44/102 (42%), Gaps = 4/102 (3%)
Query: 3 VFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLT 62
+F + L HK ++TRE+ + F +V++L E R PK S +++ +
Sbjct: 60 LFDLIHKLTTDHKTVTRITREVVEDFALENVVYL-ELRTTPKRSDSIGMSKRSYMEAVIQ 118
Query: 63 AVHDKILEDLVFPTEIVGKRVRYL---VGGNKIQKILLNSKD 101
+ D+ F T +++ +G KI LL S D
Sbjct: 119 GLRSVSEVDIDFVTASDSQKLHNAGDGIGRKKIYVRLLLSID 160
>At2g07450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1012
Score = 26.6 bits (57), Expect = 9.7
Identities = 11/48 (22%), Positives = 27/48 (55%), Gaps = 2/48 (4%)
Query: 23 ELEKKFQDRHVIFLAERRILPKPSRKSRQTQKRPRSRTLTAVHDKILE 70
E+E++ + V+F+ ++LP P+ + R +R + T+ + ++E
Sbjct: 879 EIEREASEEDVVFV--EKVLPVPAPRRRNNPRRKKEPTIEEHYQYLME 924
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.137 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,659,744
Number of Sequences: 60738
Number of extensions: 304647
Number of successful extensions: 910
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 865
Number of HSP's gapped (non-prelim): 34
length of query: 133
length of database: 30,389,216
effective HSP length: 94
effective length of query: 39
effective length of database: 24,679,844
effective search space: 962513916
effective search space used: 962513916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)