ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3287 good G KOG3075 Carbohydrate transport and metabolism Ribose 5-phosphate isomerase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3287 1155897 1156718 274
(274 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR095c [G] KOG3075 Ribose 5-phosphate isomerase 334 9e-92
SPAC144.12 [G] KOG3075 Ribose 5-phosphate isomerase 214 1e-55
Hs21389337 [G] KOG3075 Ribose 5-phosphate isomerase 190 2e-48
7291560 [G] KOG3075 Ribose 5-phosphate isomerase 166 3e-41
CE00733 [G] KOG3075 Ribose 5-phosphate isomerase 135 5e-32
At2g01290 [G] KOG3075 Ribose 5-phosphate isomerase 106 4e-23
At1g71100 [G] KOG3075 Ribose 5-phosphate isomerase 103 3e-22
At3g04790 [G] KOG3075 Ribose 5-phosphate isomerase 96 7e-20
ECU10g0180 [G] KOG3075 Ribose 5-phosphate isomerase 72 1e-12
>YOR095c [G] KOG3075 Ribose 5-phosphate isomerase
Length = 258
Score = 334 bits (856), Expect = 9e-92
Identities = 170/250 (68%), Positives = 196/250 (78%), Gaps = 6/250 (2%)
Query: 30 LNKLPPLADQLEQAKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYMDEK--- 86
++ L L + LE AKR AAYRAVDEN HK AER+G+Y+ +
Sbjct: 8 IDALESLGNPLEDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFY 67
Query: 87 ---TNFVCIPTGFQSKQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLF 143
+ F+CIPTGFQS+ LIL NKLQLG IEQ+P +DIAFDGADEVD LQLIKGGGACLF
Sbjct: 68 EVASKFICIPTGFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLF 127
Query: 144 QEKLVSTSAKKFIVVADSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKLNCKSAM 203
QEKLVSTSAK FIVVADSRKKSPK+LG NW++GVPIE+VPSSYVRV +DL +L+ +
Sbjct: 128 QEKLVSTSAKTFIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDLLEQLHAEKVD 187
Query: 204 VRQGGSAKAGPVVTDNCNFIIDADFGEITDPRKLHQDIKLLVGVVETGLFIDNAEKAYFG 263
+RQGGSAKAGPVVTDN NFIIDADFGEI+DPRKLH++IKLLVGVVETGLFIDNA KAYFG
Sbjct: 188 IRQGGSAKAGPVVTDNNNFIIDADFGEISDPRKLHREIKLLVGVVETGLFIDNASKAYFG 247
Query: 264 YPDGSVDLQE 273
DGSV++ E
Sbjct: 248 NSDGSVEVTE 257
>SPAC144.12 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 274
Score = 214 bits (544), Expect = 1e-55
Identities = 123/234 (52%), Positives = 152/234 (64%), Gaps = 4/234 (1%)
Query: 40 LEQAKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYMDEKTNFVCIPTGFQSK 99
+E AKR+A + AVDEN+ + K ERL + V IPTGFQSK
Sbjct: 13 IELAKRLACHMAVDENYP-ENPKVIGIGSGSTVVYVVERLLT-KPGVDSVVFIPTGFQSK 70
Query: 100 QLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVSTSAKKFIVVA 159
QLI++N L+LG + +P VD++FDGADEVD LQ IKGGGACLFQEKL++ AK+ ++VA
Sbjct: 71 QLIVNNGLRLGDPDCYPNVDVSFDGADEVDDNLQCIKGGGACLFQEKLIAFLAKRLVIVA 130
Query: 160 DSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKLNCKSAMVRQGGSAKAGPVVTDN 219
DSRK S LG WKKGVPIEV+P +Y +L L +L +R G KAGPVVTDN
Sbjct: 131 DSRKNS-HVLGEYWKKGVPIEVMPMAYASILPQLV-ELGAIEPKLRMGAPGKAGPVVTDN 188
Query: 220 CNFIIDADFGEITDPRKLHQDIKLLVGVVETGLFIDNAEKAYFGYPDGSVDLQE 273
NFIIDA FG I +P++L IKLLVGVVE GLF D YFG DGSV +++
Sbjct: 189 GNFIIDAHFGLIKNPKELFAKIKLLVGVVEVGLFCDMISAVYFGSKDGSVTVKK 242
>Hs21389337 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 237
Score = 190 bits (482), Expect = 2e-48
Identities = 106/234 (45%), Positives = 147/234 (62%), Gaps = 6/234 (2%)
Query: 41 EQAKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYM-DEKTNFVCIPTGFQSK 99
E+AK++A AV+ + + ++ +R+ E + E N VCIPT FQ++
Sbjct: 5 EEAKKLAGRAAVENH--VRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQAR 62
Query: 100 QLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVSTSAKKFIVVA 159
QLIL L L +++ PE+D+A DGADEVDA L LIKGGG CL QEK+V+ A +FIV+A
Sbjct: 63 QLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIA 122
Query: 160 DSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKLNCKSAMVRQGGSAKAGPVVTDN 219
D RK S K LG W KG+PIEV+P +YV V + K + + KAGPVVTDN
Sbjct: 123 DFRKDS-KNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFG--GVVELRMAVNKAGPVVTDN 179
Query: 220 CNFIIDADFGEITDPRKLHQDIKLLVGVVETGLFIDNAEKAYFGYPDGSVDLQE 273
NFI+D F + +++ IK++ GVV+TGLFI+ AE+ YFG DGSV+++E
Sbjct: 180 GNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMRE 233
>7291560 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 325
Score = 166 bits (421), Expect = 3e-41
Identities = 97/238 (40%), Positives = 144/238 (59%), Gaps = 9/238 (3%)
Query: 40 LEQAKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYM---DEKTNFVCIPTGF 96
L+ AK+ AA AVD+ T K +R+ E + E T+ +C+P+ +
Sbjct: 90 LDAAKKTAARTAVDQWVTEDT-KILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSY 148
Query: 97 QSKQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVSTSAKKFI 156
Q++ LIL L LG +++ P +D+A DGADEVD + LIKGGG CL QEK+V++ AK FI
Sbjct: 149 QARHLILDYNLNLGDLDRNPNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFI 208
Query: 157 VVADSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKLNCKSAMVRQGGSAKAGPVV 216
VVAD K S + LG W +GVPIEV P +YV + ++ ++++ + KAGP+V
Sbjct: 209 VVADYTKNSIR-LGEQWCRGVPIEVAPMAYVPIKLHIEALFGGEASL--RMAKVKAGPIV 265
Query: 217 TDNCNFIIDADF--GEITDPRKLHQDIKLLVGVVETGLFIDNAEKAYFGYPDGSVDLQ 272
TDN NF++D F D ++++ I L+ GV+ETGLF++ A K Y+G +GSV +Q
Sbjct: 266 TDNGNFLLDWKFIANREYDWDEVNRAITLIPGVLETGLFVNMAHKCYYGMANGSVKVQ 323
>CE00733 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 251
Score = 135 bits (341), Expect = 5e-32
Identities = 86/233 (36%), Positives = 123/233 (51%), Gaps = 7/233 (3%)
Query: 40 LEQAKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYMDEKTNFVCIPTGFQSK 99
+EQAK+ AA+ ++ + + G + +C+PT F +K
Sbjct: 14 IEQAKKRAAFACGEKYVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTK 73
Query: 100 QLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVSTSAKKFIVVA 159
Q ++ + L + ++ PE+D+ DGADEVD IKGGG CL QEK+V T+AK F V+A
Sbjct: 74 QWLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIA 133
Query: 160 DSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKLNCKSAMVRQGGSAKAGPVVTDN 219
D K S K+LG + VPIEV+P + +L + + S +RQ K GP+VTDN
Sbjct: 134 DYLKDS-KHLGDRY-PNVPIEVLPLAAQPLLRSIP-RAEGGSCQLRQ-AVKKCGPIVTDN 189
Query: 220 CNFIIDADFGEITDPR---KLHQDIKLLVGVVETGLFIDNAEKAYFGYPDGSV 269
NFIID F + R + Q + G+VETGLFI + +F Y DGSV
Sbjct: 190 GNFIIDWQFEKNVSGRDWFAIQQRLANTPGIVETGLFIGCVDAVFFAYSDGSV 242
>At2g01290 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 265
Score = 106 bits (264), Expect = 4e-23
Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 16/237 (6%)
Query: 29 DLNKLPPLADQLEQ--AKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYMDEK 86
D+ PP L Q KRIAAY+AV+ ++ +R+GE + +
Sbjct: 20 DVASSPPQPMNLTQDELKRIAAYKAVEF---VESGMVLGLGTGSTAKHAVDRIGELLRQG 76
Query: 87 T--NFVCIPTGFQSKQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQ 144
N V IPT ++++ LS + L ++ P +D++ DGADEVD L L+KG G L +
Sbjct: 77 KLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLR 136
Query: 145 EKLVSTSAKKFIVVADSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKL---NCKS 201
EK++ ++KKF+V+ D K K++G + K +P+E+VP + L++ L C+
Sbjct: 137 EKMIEGASKKFVVIVDD-SKMVKHIGGS-KLALPVEIVPFCWKFTAEKLRSLLEGYGCE- 193
Query: 202 AMVRQGGSAKAGPVVTDNCNFIIDADFGE-ITDPRKLHQDIKLLVGVVETGLFIDNA 257
A +R G KA VTDN N+I+D E + D + I L GVVE G+F+D A
Sbjct: 194 ANLRLGEKGKA--FVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMA 248
>At1g71100 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 267
Score = 103 bits (256), Expect = 3e-22
Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 27 LSDLNKLPPLADQL-EQAKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYMDE 85
L+ +N PPL++ E+ K+IAAY+AV+ ++ R+ E + E
Sbjct: 15 LAAVNSAPPLSNLTQEELKKIAAYKAVEF---VESGMVIGLGTGSTAKHAVARISELLRE 71
Query: 86 KT--NFVCIPTGFQSKQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLF 143
+ + IPT + + +S + L ++ P VD++ DGADEVD L L+KG G L
Sbjct: 72 GKLKDIIGIPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLL 131
Query: 144 QEKLVSTSAKKFIVVADSRKKSPKYLGTNWKKGVPIEVVP--SSYVR-VLSDLKNKLNCK 200
+EK++ ++KKF+V+ D K KY+G + VP+EVVP + R L +L C
Sbjct: 132 REKMIEGASKKFVVIVD-ESKLVKYIGGS-GLAVPVEVVPFCCDFTRGKLEELFRDSGCV 189
Query: 201 SAMVRQGGS--AKAGPVVTDNCNFIIDADF-GEITDPRKLHQDIKLLVGVVETGLFIDNA 257
+ + + GS +A P VTDN N+++D +I D + I GVVE G+F+ A
Sbjct: 190 AKLRMKIGSNGEEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMA 249
>At3g04790 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 276
Score = 95.5 bits (236), Expect = 7e-20
Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 14/242 (5%)
Query: 32 KLPPLADQLEQAKRIAAYRAVDENFDAKTHKXXXXXXXXXXXXXAERLGEYMD--EKTNF 89
K +A + K++AA +AV+ K +++G+ + E +
Sbjct: 37 KAQSVALSQDDLKKLAAEKAVEA---IKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDI 93
Query: 90 VCIPTGFQSKQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVS 149
V IPT ++++ S + L ++ P +D+A DGADEVD L L+KG G L +EK+V
Sbjct: 94 VGIPTSKRTEEQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVE 153
Query: 150 TSAKKFIVVADSRKKSPKYLGTNWKKGVPIEVVPSSY---VRVLSDLKNKLNCKSAMVRQ 206
A KFIVVAD K G+ +P+EVV + + L DL + C+S + R
Sbjct: 154 AVADKFIVVADDTKLVTGLGGSG--LAMPVEVVQFCWNFNLIRLQDLFKEFGCESKL-RV 210
Query: 207 GGSAKAGPVVTDNCNFIIDADF-GEITDPRKLHQDIKLLVGVVETGLFIDNAEKAYFGYP 265
G K P VTDN N+IID F + D ++I GVVE GLF+ A
Sbjct: 211 DGDGK--PYVTDNSNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGK 268
Query: 266 DG 267
+G
Sbjct: 269 NG 270
>ECU10g0180 [G] KOG3075 Ribose 5-phosphate isomerase
Length = 201
Score = 71.6 bits (174), Expect = 1e-12
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 18/155 (11%)
Query: 99 KQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVSTSAKKFIVV 158
K +S+ L GV+ D+ DGAD D +IKGGG L EKL+ + AK+ I++
Sbjct: 50 KGFTVSSPLAHGVL------DLYIDGADYFDKNGNMIKGGGGALTTEKLLYSMAKETIII 103
Query: 159 ADSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKLNCKSAMVRQGGSAKAGPVVTD 218
S K + G +P+E +P+S ++++S L+ K + G K GP++TD
Sbjct: 104 VQSHKYRETFDGC----FIPVEAIPTSLLKLISTLEGS-GLKYCLRETDG--KMGPLITD 156
Query: 219 NCNFIIDADFGEITDPRKLHQDIKLLVGVVETGLF 253
N I+D ++ ++ K + GVVE GLF
Sbjct: 157 LGNCIVDVEYDDV-----FISSCKSICGVVEHGLF 186
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.138 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,789,442
Number of Sequences: 60738
Number of extensions: 634799
Number of successful extensions: 1228
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1201
Number of HSP's gapped (non-prelim): 9
length of query: 274
length of database: 30,389,216
effective HSP length: 105
effective length of query: 169
effective length of database: 24,011,726
effective search space: 4057981694
effective search space used: 4057981694
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)