ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3321 good R KOG1763 General function prediction only Uncharacterized conserved protein, contains CCCH-type Zn-finger
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3321 1170546 1169506 -347
(347 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR091w [R] KOG1763 Uncharacterized conserved protein contains C... 452 e-127
Hs8923808 [R] KOG1763 Uncharacterized conserved protein contains... 216 4e-56
7304021 [R] KOG1763 Uncharacterized conserved protein contains C... 199 7e-51
At2g20280 [R] KOG1763 Uncharacterized conserved protein contains... 197 2e-50
CE09729 [R] KOG1763 Uncharacterized conserved protein contains C... 191 1e-48
SPBC28F2.02 [R] KOG1763 Uncharacterized conserved protein contai... 121 2e-27
ECU09g1010 [R] KOG1763 Uncharacterized conserved protein contain... 69 8e-12
>YOR091w [R] KOG1763 Uncharacterized conserved protein contains CCCH-type
Zn-finger
Length = 401
Score = 452 bits (1164), Expect = e-127
Identities = 216/320 (67%), Positives = 246/320 (76%), Gaps = 3/320 (0%)
Query: 16 DNVDKTFGMKNKNKSTKVQKFIKQVQSQQDPXXXXXXXXXXXXXXXXXXXXXXXXXXFNP 75
DNVDKTFGMKNKN+STKVQK+IKQVQSQ DP FNP
Sbjct: 73 DNVDKTFGMKNKNRSTKVQKYIKQVQSQSDPKKEEMRLKKLEEKKRREAEEAERRALFNP 132
Query: 76 VLDQKVKAGVDPKTVLCALFKIGNCNKGARCKFSHDMNVGRRVEKRDLYQDTRSEKEEDT 135
V DQ+V+AGVDPK+++CALFK+GNCNKGA+CKFSHD+NVGRR+EK+DLYQDTRSEKE DT
Sbjct: 133 VADQRVRAGVDPKSMVCALFKLGNCNKGAKCKFSHDLNVGRRMEKKDLYQDTRSEKENDT 192
Query: 136 MDNWDEAKLRSVILSKHGNPRTTTEKVCKYFIEAVENGKYGWFWICPNGGDKCMYKHSLP 195
MDNWDE KLR VILSKHGNP+TTT+KVCKYFIEAVENGKYGWFWICPNGGDKCMY+HSLP
Sbjct: 193 MDNWDEEKLRKVILSKHGNPKTTTDKVCKYFIEAVENGKYGWFWICPNGGDKCMYRHSLP 252
Query: 196 EGFVLKTKEQKRLEMEAFEKKPKITLEEFIETERERLDKRNLTPITMDNFAEWKKNHRIX 255
EGFVLKT EQKRLE E+ EK+PKITLEEFIETER +LDK LTPIT+ NFA+WKK+H I
Sbjct: 253 EGFVLKTNEQKRLERESLEKQPKITLEEFIETERGKLDKSKLTPITIANFAQWKKDHVIA 312
Query: 256 XXXXXXXXXXXXXPSGREVVLKKYTEDKRFDLVD---ETDSTNGSAWDLTEFTKALRDED 312
P+GRE++LK E+K F+ + D T GSAWDLTEFT AL+ D
Sbjct: 313 KINAEKKLSSKRKPTGREIILKMSAENKSFETDNADMPDDVTQGSAWDLTEFTDALKKAD 372
Query: 313 SNGSSGIKDYGDGSNPTFEL 332
GIKDYGDGSNPTF++
Sbjct: 373 HQDDGGIKDYGDGSNPTFDI 392
>Hs8923808 [R] KOG1763 Uncharacterized conserved protein contains CCCH-type
Zn-finger
Length = 397
Score = 216 bits (550), Expect = 4e-56
Identities = 129/318 (40%), Positives = 176/318 (54%), Gaps = 27/318 (8%)
Query: 19 DKTFGMKNKNKSTKVQKFIKQVQ-----SQQDPXXXXXXXXXXXXXXXXXXXXXXXXXX- 72
DKTFG+KNK K K QKFIK V QQ+P
Sbjct: 26 DKTFGLKNK-KGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKDLQELNEL 84
Query: 73 FNPVLD-QKVKAGVDPKTVLCALFKIGNCNKGARCKFSHDMNVGRRVEKRDLYQDTRSEK 131
F PV+ QK+ G DPK+V+CA FK G C KG +CKFSHD+ + R+ EKR +Y D R E+
Sbjct: 85 FKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEE 144
Query: 132 -EEDTMDNWDEAKLRSVILSKHGNP---RTTTEKVCKYFIEAVENGKYGWFWICPNGGDK 187
E+DTMDNWDE KL V+ KHG + T+ VCK+F+EA+EN KYGWFW+CP GGD
Sbjct: 145 LEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDI 204
Query: 188 CMYKHSLPEGFVLKTKEQKRLEMEAFEKKPKITLEEFIETERERLDKRNLTPITMDNFAE 247
CMY+H+LP GFVLK ++K EK+ +I+LE+ IE ER L N+T IT+++F
Sbjct: 205 CMYRHALPPGFVLKKDKKKE------EKEDEISLEDLIERERSALGP-NVTKITLESFLA 257
Query: 248 WKKNHR---IXXXXXXXXXXXXXXPSGREVVLK-KYTEDKRFDLVDETDSTNGSAWDLTE 303
WKK R I +G+ +V+ + + R +LV++ D D T
Sbjct: 258 WKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPELVNDDDEEA----DDTR 313
Query: 304 FTKALRDEDSNGSSGIKD 321
+T+ ++ + S + D
Sbjct: 314 YTQGTGGDEVDDSVSVND 331
>7304021 [R] KOG1763 Uncharacterized conserved protein contains CCCH-type
Zn-finger
Length = 404
Score = 199 bits (505), Expect = 7e-51
Identities = 111/239 (46%), Positives = 142/239 (58%), Gaps = 20/239 (8%)
Query: 19 DKTFGMKNKNKSTKVQKFIKQVQSQ-----QDPXXXXXXXXXXXXXXXXXXXXXXXXXXF 73
DKTFG+KNK K K QKFI+QVQ Q Q P F
Sbjct: 25 DKTFGLKNK-KGNKQQKFIQQVQKQVQSGGQHPRQDGDKRKEEKEKKLAEQREMALI--F 81
Query: 74 NPVLDQKVKAGVDPKTVLCALFKIGNCNKGARCKFSHDMNVGRRVEKRDLYQDTRSEKEE 133
PV QKV+ G DPK+V+CA FK G C KG +CKFSHD++ +VEKR +Y D R E+
Sbjct: 82 KPVQTQKVEKGTDPKSVVCAFFKQGTCTKGDKCKFSHDLSQENKVEKRSIYVDMRD--ED 139
Query: 134 DTMDNWDEAKLRSVILSKHG--NPRTTTEKVCKYFIEAVENGKYGWFWICPNGGDKCMYK 191
D M NWD+AKL+ V+ K R TT+ +CK+F+EAVE KYGWFW CPNGG KC+Y+
Sbjct: 140 DPMTNWDDAKLKEVVEKKSSGEKQRPTTDIICKFFLEAVEKSKYGWFWECPNGG-KCIYR 198
Query: 192 HSLPEGFVLKTKEQKRLEMEAFEKKPKITLEEFIETERERLDKRNLTPITMDNFAEWKK 250
H+LP G+VLK ++K EK +I+L + IE ER L N T +T+++F WKK
Sbjct: 199 HALPAGYVLKRDKKKE------EKPTEISLVDLIEKERAALGP-NQTRVTLESFLAWKK 250
>At2g20280 [R] KOG1763 Uncharacterized conserved protein contains CCCH-type
Zn-finger
Length = 371
Score = 197 bits (500), Expect = 2e-50
Identities = 101/235 (42%), Positives = 137/235 (57%), Gaps = 10/235 (4%)
Query: 19 DKTFGMKNKNKSTKVQKFIKQVQSQQDPXXXXXXXXXXXXXXXXXXXXXXXXXXFNPVLD 78
DKTFG+KNKNKS VQK+++ ++ P F +
Sbjct: 20 DKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDATKAAAKKKKEEEKAREQELNELFKVAIS 79
Query: 79 Q-KVKAGVDPKTVLCALFKIGNCNKGARCKFSHDMNVGRRVEKRDLYQDTRSEKEEDTMD 137
Q KV GVDPK++LC FK G C KG +CKFSHD+N+ R+ EK D+Y DTR E + MD
Sbjct: 80 QPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDTRDE--DGDMD 137
Query: 138 NWDEAKLRSVILSKHG--NPRTTTEKVCKYFIEAVENGKYGWFWICPNGGDKCMYKHSLP 195
WD+ L V+ SK N T+ VCKYF++AVE +YGWFW CPNGG +C Y+H+LP
Sbjct: 138 EWDQETLEKVVESKKNEYNQNKPTDIVCKYFLDAVEKKQYGWFWSCPNGGKECHYRHALP 197
Query: 196 EGFVLKTKEQKRLEMEAFEKKPKITLEEFIETERERLDKRNLTPITMDNFAEWKK 250
G+VLK++ + LE E+ K+ +E+ IE ER +L + T +T F EWK+
Sbjct: 198 PGYVLKSQMKALLEEES---SKKLAVEDEIENERAKL--QTATQMTPALFMEWKR 247
>CE09729 [R] KOG1763 Uncharacterized conserved protein contains CCCH-type
Zn-finger
Length = 383
Score = 191 bits (486), Expect = 1e-48
Identities = 106/250 (42%), Positives = 140/250 (55%), Gaps = 31/250 (12%)
Query: 19 DKTFGMKNKNKSTKVQKFIKQVQSQ--QDPXXXXXXXXXXXXXXXXXXXXXXXXXXFNPV 76
DKTFG+KNK K K QKF+ QV++Q + PV
Sbjct: 23 DKTFGLKNK-KGNKNQKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPV 81
Query: 77 LDQKVKAGVDPKTVLCALFKIGNCNKGARCKFSHDMNVGRRVEKRDLYQDTRSEKEEDTM 136
+QKV VDPK++LC FK G C KGA+CKFSHD+ V ++ K++L E+T
Sbjct: 82 -EQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLIP-------EETN 133
Query: 137 DNWDEAKLRSVILSKHGNP----------------RTTTEKVCKYFIEAVENGKYGWFWI 180
+NWD KL V+ K+ N + KVCKYF+EAVEN KYGWFW
Sbjct: 134 ENWDSDKLNEVVNKKNKNKHMIDIVSSFMTDIFKFKKLNFKVCKYFLEAVENNKYGWFWE 193
Query: 181 CPNGGDKCMYKHSLPEGFVLKTKEQKRLEMEAFEKKPKITLEEFIETERERLDKRNLTPI 240
CPNGG+KC Y+H LPEG+VLK KE+K +E +K+ +I++EE +E ER L +NLT +
Sbjct: 194 CPNGGEKCQYRHCLPEGYVLK-KERKAMEQ---QKEDEISIEELVEKERAALSSKNLTKL 249
Query: 241 TMDNFAEWKK 250
T+ F WKK
Sbjct: 250 TLQTFIAWKK 259
>SPBC28F2.02 [R] KOG1763 Uncharacterized conserved protein contains CCCH-type
Zn-finger
Length = 292
Score = 121 bits (303), Expect = 2e-27
Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 38/235 (16%)
Query: 19 DKTFGMKNKNKSTKVQKFIKQVQSQQDPXXXXXXXXXXXXXXXXXXXXXXXXXXFNPVLD 78
D TFG+KNKN+STKVQ I+Q++ +
Sbjct: 27 DATFGLKNKNRSTKVQAKIRQIEQN---------------AAASGSKDAKRQEALRKRRE 71
Query: 79 QKVKAGVDPKTVLCALFKIGNCNKGARCKFSHDMNVGRRVEKRDLYQDTRSEKEEDTMDN 138
++ +A K + ALF K F + +K DLY D R ++ + ++
Sbjct: 72 EEKRAAEAAKAEVAALFN-AIPKKQTPQNFLTRKEEVKESQKIDLYSDVRDQQTDLPLEK 130
Query: 139 WDEAKLRSVILSKHGNPRTTTEKVCKYFIEAVENGKYGWFWICPNGGDKCMYKHSLPEGF 198
P T+ VCK+F+EA E GKYGW W CPNG C+YKH+LP G+
Sbjct: 131 ---------------RPWINTDIVCKFFLEACETGKYGWLWQCPNGNMTCIYKHALPYGY 175
Query: 199 VLKTKEQKRLEMEAFEKKPKITLEEFIETERERLDKRNLTPITMDNFAEWKKNHR 253
VL ++K + K +I+LE FIE ER RL NLTP+T +NF +W R
Sbjct: 176 VLSRDKKKD------DTKEEISLEAFIEIERHRLGP-NLTPVTEENFKKWSDGRR 223
>ECU09g1010 [R] KOG1763 Uncharacterized conserved protein contains CCCH-type
Zn-finger
Length = 250
Score = 69.3 bits (168), Expect = 8e-12
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 63/231 (27%)
Query: 19 DKTFGMKNKNKSTKVQKFIKQVQSQQDPXXXXXXXXXXXXXXXXXXXXXXXXXXFNPVLD 78
+K FG+KNK + + K I+ + ++ N +
Sbjct: 22 EKAFGLKNKKQKAAILKQIETLNLKEQLEKKEKMRMEEKR---------------NVPVK 66
Query: 79 QKVKAGVDPKTVLCALFKIGNCNKGARCKFSHDMNVGRRVEKRDLYQDTRSEKEEDTMDN 138
Q + GVDPKTV C F C G CKF+H R+ EK KEED
Sbjct: 67 QVIPVGVDPKTVQCINFLNKTCADGDACKFAH--GEARKTEK---------PKEEDV--- 112
Query: 139 WDEAKLRSVILSKHGNPRTTTEKVCKYFIEAVENGKYGWFWICPNGGDKCMYKHSLPEGF 198
+++C++ I+A+ +G+Y W CP +C H L
Sbjct: 113 -----------------PLGPKRICQFLIDAMNSGEYNDGWTCP--FPRCSDIHKL---- 149
Query: 199 VLKTKEQKRLEMEAFEKKPKITLEEFIETERERLDKRNLTPITMDNFAEWK 249
+ K+ ++E +++EE+IE R+ L ++ LTP+T + F EWK
Sbjct: 150 -VDIKDSTQVE---------LSIEEYIELSRQSLPEK-LTPLTEETFKEWK 189
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.313 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,372,153
Number of Sequences: 60738
Number of extensions: 799646
Number of successful extensions: 2214
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2183
Number of HSP's gapped (non-prelim): 9
length of query: 347
length of database: 30,389,216
effective HSP length: 107
effective length of query: 240
effective length of database: 23,890,250
effective search space: 5733660000
effective search space used: 5733660000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)