ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3420 good R KOG3351 General function prediction only Predicted nucleotidyltransferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3420 1205868 1205002 -289
(289 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR277c [R] KOG3351 Predicted nucleotidyltransferase 251 7e-67
Hs21489977_1 [R] KOG3351 Predicted nucleotidyltransferase 119 7e-27
At2g18250 [R] KOG3351 Predicted nucleotidyltransferase 115 6e-26
CE28145_1 [R] KOG3351 Predicted nucleotidyltransferase 105 6e-23
SPAC1F12.08 [R] KOG3351 Predicted nucleotidyltransferase 100 2e-21
>YGR277c [R] KOG3351 Predicted nucleotidyltransferase
Length = 305
Score = 251 bits (642), Expect = 7e-67
Identities = 127/268 (47%), Positives = 190/268 (70%), Gaps = 15/268 (5%)
Query: 24 VVEQTLPFLRDSTEYSLDIILEEKFDNAYHLDSYLGHIYSISRDVLITKELFFTNINVLF 83
++ QT+PFLR+ + LDI++ +F ++ LDS LG +YSI+RDVL+ + + IN++F
Sbjct: 24 IIGQTIPFLREC-QSQLDIVIVPEFKTSFQLDSALGKMYSITRDVLLGYGMINSGINIIF 82
Query: 84 N---LSENNLLYDVIFAQESATSPNYKCK-------KLKIFQLSP-ISESYNGTFQPLER 132
N E+NL + V+ + +T +K + ++ + L I E G P +
Sbjct: 83 NNIHFVESNLQWKVVLLPQESTFETWKLELGQGQYHSIEHYALHDNIMEEIEG---PKDA 139
Query: 133 NQYRVSAVGGTFDHIHDGHKILLSVASFITNEKLIIGLTNQELLANKQHKALLEPFSVRS 192
N++ V+A+GGTFDHIHDGHKILLSV++FIT+++LI G+T ELL NK++K L+EP+ R
Sbjct: 140 NKFHVTALGGTFDHIHDGHKILLSVSTFITSQRLICGITCDELLQNKKYKELIEPYDTRC 199
Query: 193 ANVEEFLKLLKPSLKIEIIAIRDVCGPTGTVPDIQALIVSRETLGGGKIVNKTRLDRGLS 252
+V +F+KLLKP L +E++ +RDVCGPTG VP+I+ L+VSRET+ G + VNKTR+++G+S
Sbjct: 200 RHVHQFIKLLKPDLSVELVPLRDVCGPTGKVPEIECLVVSRETVSGAETVNKTRIEKGMS 259
Query: 253 ELDIIVVNVLGGQEDDGWKEKMSSTELR 280
L + VVNVLGG+E+DGW EK+SSTE+R
Sbjct: 260 PLAVHVVNVLGGREEDGWSEKLSSTEIR 287
>Hs21489977_1 [R] KOG3351 Predicted nucleotidyltransferase
Length = 339
Score = 119 bits (297), Expect = 7e-27
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 3/168 (1%)
Query: 116 LSPISESYNGTFQPLERNQYRVSAVGGTFDHIHDGHKILLSVASFITNEKLIIGLTNQEL 175
+ P S QP+ R YR AVGGTFD +H+ HK+LLSVA + E+L++G+ +++L
Sbjct: 174 IRPASPVAGSPKQPV-RGYYR-GAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDL 231
Query: 176 LANKQHKALLEPFSVRSANVEEFLKLLKPSLKIEIIAIRDVCGPTGTVPDIQALIVSRET 235
L +K LL+P++ R ++ EFL +KPSL ++I + D GP G+ P ++ L+VS ET
Sbjct: 232 LKSKLLPELLQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEET 291
Query: 236 LGGGKIVNKTRLDRGLSELDIIVVNVLGG-QEDDGWKEKMSSTELRER 282
GG +N+ RL+ L EL + + +L + + ++K+SS+ R+R
Sbjct: 292 YRGGMAINRFRLENDLEELALYQIQLLKDLRHTENEEDKVSSSSFRQR 339
>At2g18250 [R] KOG3351 Predicted nucleotidyltransferase
Length = 176
Score = 115 bits (289), Expect = 6e-26
Identities = 57/157 (36%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Query: 133 NQYRVSAVGGTFDHIHDGHKILLSVASFITNEKLIIGLTNQELLANKQHKALLEPFSVRS 192
N + +GGTFD +HDGH++ L A+ + +++++G+ + +L KQ +++P R
Sbjct: 13 NSFGAVVLGGTFDRLHDGHRMFLKAAAELARDRIVVGVCDGPMLTKKQFSDMIQPIEERM 72
Query: 193 ANVEEFLKLLKPSLKIEIIAIRDVCGPTGTVPDIQALIVSRETLGGGKIVNKTRLDRGLS 252
NVE ++K +KP L ++ I D GP+ +++A++VS+ETL GG VN+ R +RGLS
Sbjct: 73 RNVETYVKSIKPELVVQAEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNRKRAERGLS 132
Query: 253 ELDIIVVNVLGGQEDDGWKEKMSSTELRERHSKKLSK 289
+L I VV ++ D K+SS+ LR+ ++K SK
Sbjct: 133 QLKIEVVEIV---SDGSSGNKISSSTLRKMEAEKASK 166
>CE28145_1 [R] KOG3351 Predicted nucleotidyltransferase
Length = 246
Score = 105 bits (263), Expect = 6e-23
Identities = 49/147 (33%), Positives = 96/147 (64%)
Query: 134 QYRVSAVGGTFDHIHDGHKILLSVASFITNEKLIIGLTNQELLANKQHKALLEPFSVRSA 193
+Y+ +GGTFD +H+GHK+LL+ A+ + ++ +++G+T+++++ K ++EP R
Sbjct: 98 KYKKVVLGGTFDRLHNGHKVLLNKAAELASDVIVVGVTDKDMIIKKSLFEMIEPVEFRIK 157
Query: 194 NVEEFLKLLKPSLKIEIIAIRDVCGPTGTVPDIQALIVSRETLGGGKIVNKTRLDRGLSE 253
V +F++ + + K I D GP+ + D++A++VSRET+ G VNK R ++G+S+
Sbjct: 158 KVVDFVEDISGTAKCLAEPIIDPFGPSTRIKDLEAIVVSRETIKGADAVNKKRNEQGMSQ 217
Query: 254 LDIIVVNVLGGQEDDGWKEKMSSTELR 280
LD+I+V ++ G ++ + K+SS+ R
Sbjct: 218 LDVIIVELVEGSDEILKETKISSSSRR 244
>SPAC1F12.08 [R] KOG3351 Predicted nucleotidyltransferase
Length = 329
Score = 100 bits (249), Expect = 2e-21
Identities = 61/166 (36%), Positives = 90/166 (53%), Gaps = 17/166 (10%)
Query: 137 VSAVGGTFDHIHDGHKILLSVASFITNEKLIIGLTN-------------QELLANKQHKA 183
VSAVGGTFDH+H GHK+LL++ ++ +++I+G++ ELL K K
Sbjct: 158 VSAVGGTFDHLHVGHKVLLTLTAWFGVKEVIVGVSGTKNENGRTLIILGDELLKKKVQKE 217
Query: 184 LLEPFSVRSANVEEFLKLLKPSLKIEIIAIRDVCGPTGTVPDIQALIVSRETLGGGKIVN 243
LE R V FL +K + ++ I D GPT T +I +LIVS ET G V
Sbjct: 218 FLENIQKRKEEVSNFLHSIKEDINCRVVTIHDPFGPTITDAEIDSLIVSEETKTGATAVQ 277
Query: 244 KTRLDRGLSELDIIVVNVLGGQEDDGWKE----KMSSTELRERHSK 285
+ R+ RGL EL I +++L ++ K+ K+SST +RE +K
Sbjct: 278 EERVKRGLPELSIYCIDLLYPAQELNLKDNNSLKVSSTAIREELAK 323
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.138 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,933,044
Number of Sequences: 60738
Number of extensions: 715899
Number of successful extensions: 1829
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1822
Number of HSP's gapped (non-prelim): 5
length of query: 289
length of database: 30,389,216
effective HSP length: 105
effective length of query: 184
effective length of database: 24,011,726
effective search space: 4418157584
effective search space used: 4418157584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)